Multiple sequence alignment - TraesCS5B01G519600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G519600 chr5B 100.000 3956 0 0 1 3956 682197808 682193853 0.000000e+00 7306.0
1 TraesCS5B01G519600 chr5B 81.831 2796 381 71 873 3575 682186945 682184184 0.000000e+00 2231.0
2 TraesCS5B01G519600 chr5B 82.167 2473 356 43 841 3250 682954889 682952439 0.000000e+00 2045.0
3 TraesCS5B01G519600 chr5B 88.654 379 43 0 3578 3956 108839075 108839453 2.780000e-126 462.0
4 TraesCS5B01G519600 chr5B 78.355 231 38 8 350 580 682956212 682955994 5.330000e-29 139.0
5 TraesCS5B01G519600 chr5D 85.640 2709 297 44 843 3500 539984843 539982176 0.000000e+00 2763.0
6 TraesCS5B01G519600 chr5D 81.604 2082 313 47 873 2914 539977404 539975353 0.000000e+00 1659.0
7 TraesCS5B01G519600 chr5D 88.158 684 44 11 160 838 539985541 539984890 0.000000e+00 780.0
8 TraesCS5B01G519600 chr5D 90.341 352 32 2 3606 3956 58121932 58121582 1.000000e-125 460.0
9 TraesCS5B01G519600 chr5D 88.451 381 40 4 3578 3956 456847513 456847135 1.300000e-124 457.0
10 TraesCS5B01G519600 chr5D 85.526 152 22 0 2741 2892 437010666 437010817 4.090000e-35 159.0
11 TraesCS5B01G519600 chr5D 95.000 40 2 0 129 168 539985757 539985718 3.300000e-06 63.9
12 TraesCS5B01G519600 chr4A 83.690 2054 282 33 888 2914 627823520 627821493 0.000000e+00 1888.0
13 TraesCS5B01G519600 chr4A 91.783 572 37 4 2996 3565 627905088 627904525 0.000000e+00 787.0
14 TraesCS5B01G519600 chr4A 83.275 574 83 4 947 1516 627917822 627917258 2.110000e-142 516.0
15 TraesCS5B01G519600 chr4A 85.396 404 26 13 166 540 627918945 627918546 4.790000e-104 388.0
16 TraesCS5B01G519600 chr4A 79.174 581 87 23 3004 3572 614576433 614576991 4.830000e-99 372.0
17 TraesCS5B01G519600 chr4A 78.571 490 65 12 3124 3575 627821263 627820776 1.800000e-73 287.0
18 TraesCS5B01G519600 chr4A 88.406 69 8 0 24 92 627919014 627918946 2.530000e-12 84.2
19 TraesCS5B01G519600 chr2A 89.446 379 40 0 3578 3956 657446167 657446545 2.770000e-131 479.0
20 TraesCS5B01G519600 chr2A 82.075 106 17 2 2749 2853 756965423 756965319 5.440000e-14 89.8
21 TraesCS5B01G519600 chr6D 88.281 384 44 1 3574 3956 438271983 438271600 3.600000e-125 459.0
22 TraesCS5B01G519600 chrUn 88.919 370 41 0 3587 3956 319376142 319375773 1.300000e-124 457.0
23 TraesCS5B01G519600 chr7D 88.391 379 44 0 3578 3956 538933726 538933348 1.300000e-124 457.0
24 TraesCS5B01G519600 chr2D 88.391 379 42 2 3578 3956 587269641 587270017 4.660000e-124 455.0
25 TraesCS5B01G519600 chr4B 88.360 378 43 1 3578 3955 468644414 468644038 1.680000e-123 453.0
26 TraesCS5B01G519600 chr3B 86.667 60 8 0 2498 2557 2990696 2990637 2.550000e-07 67.6
27 TraesCS5B01G519600 chr3B 76.415 106 25 0 1928 2033 63405053 63405158 1.540000e-04 58.4
28 TraesCS5B01G519600 chr1A 86.538 52 7 0 2506 2557 503327830 503327779 1.540000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G519600 chr5B 682193853 682197808 3955 True 7306.0 7306 100.000000 1 3956 1 chr5B.!!$R2 3955
1 TraesCS5B01G519600 chr5B 682184184 682186945 2761 True 2231.0 2231 81.831000 873 3575 1 chr5B.!!$R1 2702
2 TraesCS5B01G519600 chr5B 682952439 682956212 3773 True 1092.0 2045 80.261000 350 3250 2 chr5B.!!$R3 2900
3 TraesCS5B01G519600 chr5D 539975353 539977404 2051 True 1659.0 1659 81.604000 873 2914 1 chr5D.!!$R3 2041
4 TraesCS5B01G519600 chr5D 539982176 539985757 3581 True 1202.3 2763 89.599333 129 3500 3 chr5D.!!$R4 3371
5 TraesCS5B01G519600 chr4A 627820776 627823520 2744 True 1087.5 1888 81.130500 888 3575 2 chr4A.!!$R2 2687
6 TraesCS5B01G519600 chr4A 627904525 627905088 563 True 787.0 787 91.783000 2996 3565 1 chr4A.!!$R1 569
7 TraesCS5B01G519600 chr4A 614576433 614576991 558 False 372.0 372 79.174000 3004 3572 1 chr4A.!!$F1 568
8 TraesCS5B01G519600 chr4A 627917258 627919014 1756 True 329.4 516 85.692333 24 1516 3 chr4A.!!$R3 1492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
121 122 0.038166 ACAAAGCGGTGGATGTGGAT 59.962 50.0 0.00 0.00 0.00 3.41 F
123 124 0.038166 AAAGCGGTGGATGTGGATGT 59.962 50.0 0.00 0.00 0.00 3.06 F
1527 2818 0.170561 CCAGAAGTCTGTCCGTACGG 59.829 60.0 28.66 28.66 42.27 4.02 F
2094 3420 0.030638 AGATGTGGTGCGCAAACAAC 59.969 50.0 25.54 22.87 0.00 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1476 2767 0.035056 TAAAGCTGGCCCTCTTGAGC 60.035 55.0 0.0 0.1 0.00 4.26 R
1908 3222 0.466922 ATAACCATGAGCAGCAGCCC 60.467 55.0 0.0 0.0 43.56 5.19 R
2462 3821 0.104672 TCCACTTGGACCTTGGGAGA 60.105 55.0 0.0 0.0 39.78 3.71 R
3689 5178 0.038343 AATGTGCCGCAACAATCACC 60.038 50.0 0.0 0.0 32.81 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 0.673985 GCTTTGGTTGGGAACTGGTC 59.326 55.000 0.00 0.00 0.00 4.02
92 93 1.545651 GGTTGGGAACTGGTCCTTGAG 60.546 57.143 12.27 0.00 46.92 3.02
93 94 0.110486 TTGGGAACTGGTCCTTGAGC 59.890 55.000 12.27 0.00 46.92 4.26
94 95 1.059584 TGGGAACTGGTCCTTGAGCA 61.060 55.000 12.27 0.00 46.92 4.26
96 97 1.272147 GGGAACTGGTCCTTGAGCATT 60.272 52.381 12.27 0.00 46.92 3.56
98 99 2.290577 GGAACTGGTCCTTGAGCATTCT 60.291 50.000 3.98 0.00 43.98 2.40
101 102 2.027377 ACTGGTCCTTGAGCATTCTGAG 60.027 50.000 0.00 0.00 39.36 3.35
103 104 2.027745 TGGTCCTTGAGCATTCTGAGAC 60.028 50.000 0.00 0.00 35.04 3.36
104 105 2.027745 GGTCCTTGAGCATTCTGAGACA 60.028 50.000 0.00 0.00 0.00 3.41
106 107 4.067896 GTCCTTGAGCATTCTGAGACAAA 58.932 43.478 0.00 0.00 0.00 2.83
107 108 4.153835 GTCCTTGAGCATTCTGAGACAAAG 59.846 45.833 0.00 0.00 0.00 2.77
108 109 3.119919 CCTTGAGCATTCTGAGACAAAGC 60.120 47.826 0.00 0.00 0.00 3.51
109 110 2.071540 TGAGCATTCTGAGACAAAGCG 58.928 47.619 0.00 0.00 0.00 4.68
111 112 1.160137 GCATTCTGAGACAAAGCGGT 58.840 50.000 0.00 0.00 0.00 5.68
112 113 1.135859 GCATTCTGAGACAAAGCGGTG 60.136 52.381 0.00 0.00 0.00 4.94
113 114 1.466167 CATTCTGAGACAAAGCGGTGG 59.534 52.381 0.00 0.00 0.00 4.61
115 116 0.976641 TCTGAGACAAAGCGGTGGAT 59.023 50.000 0.00 0.00 0.00 3.41
116 117 1.081892 CTGAGACAAAGCGGTGGATG 58.918 55.000 0.00 0.00 0.00 3.51
117 118 0.396435 TGAGACAAAGCGGTGGATGT 59.604 50.000 0.00 0.00 0.00 3.06
118 119 0.798776 GAGACAAAGCGGTGGATGTG 59.201 55.000 5.79 0.00 0.00 3.21
119 120 0.606401 AGACAAAGCGGTGGATGTGG 60.606 55.000 5.79 0.00 0.00 4.17
120 121 0.605319 GACAAAGCGGTGGATGTGGA 60.605 55.000 5.79 0.00 0.00 4.02
121 122 0.038166 ACAAAGCGGTGGATGTGGAT 59.962 50.000 0.00 0.00 0.00 3.41
122 123 0.452987 CAAAGCGGTGGATGTGGATG 59.547 55.000 0.00 0.00 0.00 3.51
123 124 0.038166 AAAGCGGTGGATGTGGATGT 59.962 50.000 0.00 0.00 0.00 3.06
124 125 0.677731 AAGCGGTGGATGTGGATGTG 60.678 55.000 0.00 0.00 0.00 3.21
131 132 0.620556 GGATGTGGATGTGGTCACCT 59.379 55.000 0.00 0.00 33.29 4.00
162 163 3.117888 TCCTGGCCTCATAAGGTGATTTC 60.118 47.826 3.32 0.00 45.34 2.17
223 409 9.457436 AATTTTCGTGTAGGTTACCAAGATATT 57.543 29.630 3.51 0.00 0.00 1.28
244 430 1.002069 TGGGGCAAACTGAGATGGAT 58.998 50.000 0.00 0.00 0.00 3.41
247 433 1.064463 GGGCAAACTGAGATGGATGGA 60.064 52.381 0.00 0.00 0.00 3.41
248 434 2.621407 GGGCAAACTGAGATGGATGGAA 60.621 50.000 0.00 0.00 0.00 3.53
249 435 2.424956 GGCAAACTGAGATGGATGGAAC 59.575 50.000 0.00 0.00 0.00 3.62
283 494 2.566833 TGAAGCTTGCTTCAGGCTAA 57.433 45.000 27.72 9.67 45.83 3.09
349 564 3.326006 ACCTCAGACAAGCAATGAGAGAA 59.674 43.478 3.09 0.00 42.48 2.87
445 1158 5.719173 TGATCATGATCAACACGTGAGTTA 58.281 37.500 31.46 7.57 43.01 2.24
447 1160 5.134202 TCATGATCAACACGTGAGTTAGT 57.866 39.130 25.01 2.46 46.40 2.24
456 1169 5.306532 ACACGTGAGTTAGTATGTACCAG 57.693 43.478 25.01 0.00 46.40 4.00
536 1307 2.033448 TGCGCACCTTTACCCTGG 59.967 61.111 5.66 0.00 0.00 4.45
541 1312 0.623723 GCACCTTTACCCTGGGATCA 59.376 55.000 22.23 0.44 0.00 2.92
545 1316 0.909623 CTTTACCCTGGGATCACCGT 59.090 55.000 22.23 0.00 44.64 4.83
547 1318 1.488390 TTACCCTGGGATCACCGTAC 58.512 55.000 22.23 0.00 44.64 3.67
548 1319 0.397535 TACCCTGGGATCACCGTACC 60.398 60.000 22.23 0.00 44.64 3.34
549 1320 1.687840 CCCTGGGATCACCGTACCA 60.688 63.158 7.01 0.00 44.64 3.25
550 1321 1.520666 CCTGGGATCACCGTACCAC 59.479 63.158 0.00 0.00 44.64 4.16
551 1322 1.141019 CTGGGATCACCGTACCACG 59.859 63.158 0.00 0.00 44.64 4.94
552 1323 1.304299 TGGGATCACCGTACCACGA 60.304 57.895 0.00 0.00 46.05 4.35
554 1325 0.459063 GGGATCACCGTACCACGAAC 60.459 60.000 0.00 0.00 46.05 3.95
555 1326 0.244450 GGATCACCGTACCACGAACA 59.756 55.000 0.00 0.00 46.05 3.18
594 1365 9.541884 TCCTCAAATAAAAGCTAATTAAAGGGT 57.458 29.630 0.00 0.00 0.00 4.34
637 1408 2.360553 AGAAGCAGGATATCGATGCG 57.639 50.000 19.84 0.00 44.64 4.73
650 1421 2.062519 TCGATGCGTTGTTTCGATTGA 58.937 42.857 0.00 0.00 37.01 2.57
693 1464 1.654954 CCACGAGGACTCCAGGTACG 61.655 65.000 0.00 0.00 36.89 3.67
698 1469 2.488820 GACTCCAGGTACGACGGC 59.511 66.667 0.00 0.00 0.00 5.68
720 1491 4.384846 GCATCAAATGAAAGCTCTGTTGTG 59.615 41.667 0.00 0.00 0.00 3.33
738 1513 2.159156 TGTGCACAAGTTGTCGTACTCT 60.159 45.455 19.28 0.00 0.00 3.24
740 1515 2.361119 TGCACAAGTTGTCGTACTCTCT 59.639 45.455 5.27 0.00 0.00 3.10
743 1518 3.004419 CACAAGTTGTCGTACTCTCTCCA 59.996 47.826 5.27 0.00 0.00 3.86
745 1520 4.281182 ACAAGTTGTCGTACTCTCTCCATT 59.719 41.667 1.64 0.00 0.00 3.16
756 1531 7.039223 TCGTACTCTCTCCATTTCCTTTTACTT 60.039 37.037 0.00 0.00 0.00 2.24
770 1545 8.810652 TTCCTTTTACTTCACATATTTGTTGC 57.189 30.769 0.00 0.00 32.34 4.17
780 1555 3.994392 ACATATTTGTTGCGTCTCGAGTT 59.006 39.130 13.13 0.00 29.55 3.01
792 1567 4.607778 GCGTCTCGAGTTAAACTTTCCAAC 60.608 45.833 13.13 0.00 0.00 3.77
823 1598 8.122472 ACCAAAGTTTTAGTTCCTAATGGATG 57.878 34.615 7.31 0.00 42.81 3.51
882 2075 2.507102 CGCCAGTAGCACCACTCG 60.507 66.667 0.00 0.00 44.04 4.18
926 2187 3.941188 ACACACTGGGTCGCCCTG 61.941 66.667 16.47 16.47 45.70 4.45
985 2256 4.263243 CCCAAGTGAACAAGAGAGGAAGAT 60.263 45.833 0.00 0.00 0.00 2.40
1014 2296 1.950828 CATGCATGGGTCTCTCAGAC 58.049 55.000 19.40 0.00 44.32 3.51
1047 2329 1.219124 GGATGAGTGGAAGCTGCGA 59.781 57.895 0.00 0.00 0.00 5.10
1069 2351 1.572085 CCTTGTCTTGTGCAGCCTCG 61.572 60.000 0.00 0.00 0.00 4.63
1070 2352 0.882042 CTTGTCTTGTGCAGCCTCGT 60.882 55.000 0.00 0.00 0.00 4.18
1072 2354 0.391228 TGTCTTGTGCAGCCTCGTTA 59.609 50.000 0.00 0.00 0.00 3.18
1088 2370 4.160626 CCTCGTTATCCAGTTCTTCCTCTT 59.839 45.833 0.00 0.00 0.00 2.85
1107 2389 2.281484 TTCTCTGGTTGGGTGCGC 60.281 61.111 0.00 0.00 0.00 6.09
1112 2394 0.833949 TCTGGTTGGGTGCGCATATA 59.166 50.000 15.91 0.00 0.00 0.86
1113 2395 0.944386 CTGGTTGGGTGCGCATATAC 59.056 55.000 15.91 9.84 0.00 1.47
1126 2408 2.858344 CGCATATACCATAAGCTACGCC 59.142 50.000 0.00 0.00 0.00 5.68
1161 2443 2.035469 TGGATGGCGCACATTGGT 59.965 55.556 10.83 0.00 40.72 3.67
1170 2452 1.983481 GCACATTGGTGGGGATGCA 60.983 57.895 0.00 0.00 45.38 3.96
1236 2518 0.321653 GAACTGCGGTTGATGGGAGT 60.322 55.000 17.49 0.00 36.31 3.85
1295 2577 2.282462 CCTTGGTGGCCAGGACAC 60.282 66.667 18.52 18.52 41.56 3.67
1298 2580 0.540365 CTTGGTGGCCAGGACACAAT 60.540 55.000 27.71 0.00 44.59 2.71
1314 2605 1.003118 ACAATTGCCTACAGCCTCGAA 59.997 47.619 5.05 0.00 42.71 3.71
1315 2606 2.083774 CAATTGCCTACAGCCTCGAAA 58.916 47.619 0.00 0.00 42.71 3.46
1325 2616 1.536766 CAGCCTCGAAAACAATGAGCA 59.463 47.619 0.00 0.00 0.00 4.26
1347 2638 1.165270 GGATGCGGTATGCCATAACC 58.835 55.000 0.00 0.00 45.60 2.85
1360 2651 1.615919 CCATAACCCTGGTGTCCCAAC 60.616 57.143 0.00 0.00 41.27 3.77
1368 2659 2.280592 GTGTCCCAACTCGCGGTT 60.281 61.111 6.13 6.72 38.93 4.44
1385 2676 3.857052 CGGTTGCCTTGTACATCTTCTA 58.143 45.455 0.00 0.00 0.00 2.10
1389 2680 5.648092 GGTTGCCTTGTACATCTTCTACAAT 59.352 40.000 0.00 0.00 34.39 2.71
1401 2692 3.009033 TCTTCTACAATTGGTGGTCTGGG 59.991 47.826 10.83 0.00 0.00 4.45
1446 2737 4.437239 CAGTCTTGCTCTTTATCATCGGT 58.563 43.478 0.00 0.00 0.00 4.69
1450 2741 6.040955 AGTCTTGCTCTTTATCATCGGTATCA 59.959 38.462 0.00 0.00 0.00 2.15
1468 2759 6.402222 GGTATCATCAAGTTCAGTGAGAAGT 58.598 40.000 0.00 0.00 41.66 3.01
1476 2767 0.247460 TCAGTGAGAAGTCATGGGCG 59.753 55.000 0.00 0.00 34.36 6.13
1527 2818 0.170561 CCAGAAGTCTGTCCGTACGG 59.829 60.000 28.66 28.66 42.27 4.02
1530 2821 1.163554 GAAGTCTGTCCGTACGGAGT 58.836 55.000 36.37 16.02 46.16 3.85
1536 2827 2.559668 TCTGTCCGTACGGAGTGAAAAT 59.440 45.455 36.37 0.00 46.16 1.82
1537 2828 3.758023 TCTGTCCGTACGGAGTGAAAATA 59.242 43.478 36.37 10.01 46.16 1.40
1553 2844 8.280258 AGTGAAAATAGATCCATTCCTCCATA 57.720 34.615 0.00 0.00 0.00 2.74
1562 2853 5.668135 TCCATTCCTCCATATTGGACATT 57.332 39.130 0.00 0.00 42.67 2.71
1583 2874 1.314534 TGCACTTCGGATTGCATGGG 61.315 55.000 4.32 0.00 43.79 4.00
1584 2875 1.434696 CACTTCGGATTGCATGGGC 59.565 57.895 0.00 0.00 41.68 5.36
1588 2879 1.205417 CTTCGGATTGCATGGGCTTTT 59.795 47.619 0.00 0.00 41.91 2.27
1615 2909 4.460382 CAGCAAAGCATAAAGGAGAGGAAA 59.540 41.667 0.00 0.00 0.00 3.13
1623 2918 5.564848 GCATAAAGGAGAGGAAAAACACCAC 60.565 44.000 0.00 0.00 0.00 4.16
1651 2946 7.571428 GCAACCTTTCACTTGAAGACTATGTAC 60.571 40.741 0.00 0.00 35.21 2.90
1660 2955 5.073311 TGAAGACTATGTACAAGAGGCAC 57.927 43.478 14.63 9.39 0.00 5.01
1662 2957 4.457834 AGACTATGTACAAGAGGCACAC 57.542 45.455 14.63 2.05 0.00 3.82
1686 2996 2.297698 TTGTACAAGAGACGGGGAGA 57.702 50.000 3.59 0.00 0.00 3.71
1687 2997 2.297698 TGTACAAGAGACGGGGAGAA 57.702 50.000 0.00 0.00 0.00 2.87
1702 3012 3.068165 GGGGAGAACAAGTGACCAAAAAG 59.932 47.826 0.00 0.00 0.00 2.27
1707 3017 2.102578 ACAAGTGACCAAAAAGCAGCT 58.897 42.857 0.00 0.00 0.00 4.24
1721 3031 9.076596 CCAAAAAGCAGCTATTATCAAGTTTAC 57.923 33.333 0.00 0.00 0.00 2.01
1727 3037 4.511826 AGCTATTATCAAGTTTACTGCCGC 59.488 41.667 0.00 0.00 0.00 6.53
1729 3039 5.694910 GCTATTATCAAGTTTACTGCCGCTA 59.305 40.000 0.00 0.00 0.00 4.26
1763 3077 2.101415 TCTCTATGATGCTTGTGGACCG 59.899 50.000 0.00 0.00 0.00 4.79
1772 3086 1.202428 GCTTGTGGACCGATCTACTCC 60.202 57.143 0.00 0.00 37.24 3.85
1778 3092 2.700371 TGGACCGATCTACTCCGTACTA 59.300 50.000 0.00 0.00 0.00 1.82
1788 3102 5.046529 TCTACTCCGTACTATGTTCGTCTC 58.953 45.833 0.00 0.00 0.00 3.36
1800 3114 8.277490 ACTATGTTCGTCTCAACTATCTACAA 57.723 34.615 0.00 0.00 0.00 2.41
1802 3116 7.993821 ATGTTCGTCTCAACTATCTACAATG 57.006 36.000 0.00 0.00 0.00 2.82
1808 3122 6.811665 CGTCTCAACTATCTACAATGTTTCCA 59.188 38.462 0.00 0.00 0.00 3.53
1810 3124 7.064728 GTCTCAACTATCTACAATGTTTCCACC 59.935 40.741 0.00 0.00 0.00 4.61
1814 3128 6.407202 ACTATCTACAATGTTTCCACCAGTC 58.593 40.000 0.00 0.00 0.00 3.51
1839 3153 5.390567 GGATGACGAGTATGGACACAAAAAC 60.391 44.000 0.00 0.00 0.00 2.43
1844 3158 6.050432 ACGAGTATGGACACAAAAACTTACA 58.950 36.000 0.00 0.00 0.00 2.41
1845 3159 6.539464 ACGAGTATGGACACAAAAACTTACAA 59.461 34.615 0.00 0.00 0.00 2.41
1846 3160 7.069569 CGAGTATGGACACAAAAACTTACAAG 58.930 38.462 0.00 0.00 0.00 3.16
1890 3204 1.882352 GCCCTGTACACCAAACAGAGG 60.882 57.143 4.84 5.79 45.89 3.69
1894 3208 3.433031 CCTGTACACCAAACAGAGGTCAA 60.433 47.826 4.84 0.00 45.89 3.18
1938 3252 4.527816 TGCTCATGGTTATTGCTTCCTTTT 59.472 37.500 0.00 0.00 0.00 2.27
1985 3299 1.338105 CGCCAAGAGTGACAAGGATGA 60.338 52.381 0.00 0.00 0.00 2.92
2042 3356 1.663643 GTTCTGTTGCACAGTCGTGAA 59.336 47.619 13.59 1.75 46.80 3.18
2049 3363 4.513318 TGTTGCACAGTCGTGAATCAATTA 59.487 37.500 0.00 0.00 46.80 1.40
2057 3383 5.007039 CAGTCGTGAATCAATTATCACCCTG 59.993 44.000 10.76 11.89 42.29 4.45
2058 3384 4.273480 GTCGTGAATCAATTATCACCCTGG 59.727 45.833 10.76 0.00 42.29 4.45
2083 3409 2.742372 GGCGTTGCGAGATGTGGT 60.742 61.111 0.00 0.00 0.00 4.16
2094 3420 0.030638 AGATGTGGTGCGCAAACAAC 59.969 50.000 25.54 22.87 0.00 3.32
2174 3506 1.949525 GAAGCAGCTCACCACTTTCAA 59.050 47.619 0.00 0.00 0.00 2.69
2305 3640 7.560796 AAAGATGGGTGGAAGGAGTATATAG 57.439 40.000 0.00 0.00 0.00 1.31
2408 3764 5.527951 CCTCAAACTAGGATTCGATGAGAG 58.472 45.833 8.14 0.00 39.15 3.20
2460 3819 0.977395 GCTTCTACCACCCTGACACT 59.023 55.000 0.00 0.00 0.00 3.55
2462 3821 2.224548 GCTTCTACCACCCTGACACTTT 60.225 50.000 0.00 0.00 0.00 2.66
2534 3896 6.382859 TCCAACTACATGATCTACCTGCTTTA 59.617 38.462 0.00 0.00 0.00 1.85
2541 3903 2.074547 TCTACCTGCTTTACGTGTGC 57.925 50.000 0.00 0.00 0.00 4.57
2577 3939 1.826385 CAGGGACGAGGCAAGATTTT 58.174 50.000 0.00 0.00 0.00 1.82
2598 3960 4.961435 TTTCACATATGCTTGCGATGAA 57.039 36.364 1.58 0.64 0.00 2.57
2654 4016 4.685322 CAAGCATTGCACGGAGGATTCG 62.685 54.545 11.91 0.00 41.63 3.34
2671 4033 7.148507 GGAGGATTCGTCATATGAAACATGATC 60.149 40.741 7.07 5.77 35.02 2.92
2859 4227 2.107726 AGGTGGGGAGTTCCTTACAAAC 59.892 50.000 0.00 0.00 35.95 2.93
2898 4266 4.165180 TCGTTCATGGGAATGGAAATCCTA 59.835 41.667 0.44 0.00 39.90 2.94
3001 4429 5.186021 TCAAATAAACTGGTGTGGTGTTGTT 59.814 36.000 0.00 0.00 0.00 2.83
3020 4448 8.131100 GTGTTGTTCTGATTTTCTCTTCATTCA 58.869 33.333 0.00 0.00 0.00 2.57
3188 4621 2.124736 GTTGCAGCCGCCTCCATA 60.125 61.111 0.00 0.00 37.32 2.74
3317 4772 8.463607 GTTTATTTAAGCTATTTGTGTGCCCTA 58.536 33.333 0.00 0.00 0.00 3.53
3354 4832 2.813179 CTGCCGCGAGTGGTTATGC 61.813 63.158 8.23 0.00 0.00 3.14
3404 4885 7.979444 TTTGCTAGCATTACTTCTAAACTGT 57.021 32.000 20.13 0.00 0.00 3.55
3458 4944 8.927675 AGAAGTAAACCCACACATTTATTACA 57.072 30.769 0.00 0.00 0.00 2.41
3565 5054 8.498192 TTCATACTAGATTTATACGACGTTGC 57.502 34.615 5.50 0.00 0.00 4.17
3566 5055 6.793680 TCATACTAGATTTATACGACGTTGCG 59.206 38.462 5.50 0.00 37.29 4.85
3575 5064 1.065358 ACGACGTTGCGGATGTTAAG 58.935 50.000 1.65 0.00 35.12 1.85
3576 5065 1.336148 ACGACGTTGCGGATGTTAAGA 60.336 47.619 1.65 0.00 35.12 2.10
3577 5066 1.722464 CGACGTTGCGGATGTTAAGAA 59.278 47.619 0.00 0.00 0.00 2.52
3578 5067 2.222508 CGACGTTGCGGATGTTAAGAAG 60.223 50.000 0.00 0.00 0.00 2.85
3579 5068 1.463444 ACGTTGCGGATGTTAAGAAGC 59.537 47.619 0.00 0.00 0.00 3.86
3580 5069 1.202031 CGTTGCGGATGTTAAGAAGCC 60.202 52.381 0.00 0.00 0.00 4.35
3581 5070 1.132453 GTTGCGGATGTTAAGAAGCCC 59.868 52.381 0.00 0.00 0.00 5.19
3582 5071 0.618458 TGCGGATGTTAAGAAGCCCT 59.382 50.000 0.00 0.00 0.00 5.19
3583 5072 1.300481 GCGGATGTTAAGAAGCCCTC 58.700 55.000 0.00 0.00 0.00 4.30
3584 5073 1.571919 CGGATGTTAAGAAGCCCTCG 58.428 55.000 0.00 0.00 0.00 4.63
3585 5074 1.806623 CGGATGTTAAGAAGCCCTCGG 60.807 57.143 0.00 0.00 0.00 4.63
3586 5075 1.485066 GGATGTTAAGAAGCCCTCGGA 59.515 52.381 0.00 0.00 0.00 4.55
3587 5076 2.483889 GGATGTTAAGAAGCCCTCGGAG 60.484 54.545 0.00 0.00 0.00 4.63
3588 5077 0.902531 TGTTAAGAAGCCCTCGGAGG 59.097 55.000 17.41 17.41 34.30 4.30
3589 5078 1.192428 GTTAAGAAGCCCTCGGAGGA 58.808 55.000 25.60 0.00 37.67 3.71
3590 5079 1.763545 GTTAAGAAGCCCTCGGAGGAT 59.236 52.381 25.60 10.62 37.67 3.24
3591 5080 2.963782 GTTAAGAAGCCCTCGGAGGATA 59.036 50.000 25.60 5.73 37.67 2.59
3592 5081 1.710816 AAGAAGCCCTCGGAGGATAG 58.289 55.000 25.60 9.90 37.67 2.08
3593 5082 0.854218 AGAAGCCCTCGGAGGATAGA 59.146 55.000 25.60 0.00 37.67 1.98
3594 5083 1.431243 AGAAGCCCTCGGAGGATAGAT 59.569 52.381 25.60 4.60 37.67 1.98
3595 5084 2.650322 AGAAGCCCTCGGAGGATAGATA 59.350 50.000 25.60 0.00 37.67 1.98
3596 5085 2.517998 AGCCCTCGGAGGATAGATAC 57.482 55.000 25.60 5.58 37.67 2.24
3597 5086 1.006162 AGCCCTCGGAGGATAGATACC 59.994 57.143 25.60 3.30 37.67 2.73
3598 5087 1.272536 GCCCTCGGAGGATAGATACCA 60.273 57.143 25.60 0.00 37.67 3.25
3599 5088 2.624557 GCCCTCGGAGGATAGATACCAT 60.625 54.545 25.60 0.00 37.67 3.55
3600 5089 3.292460 CCCTCGGAGGATAGATACCATC 58.708 54.545 25.60 0.00 37.67 3.51
3601 5090 2.946329 CCTCGGAGGATAGATACCATCG 59.054 54.545 19.57 0.00 37.67 3.84
3602 5091 3.370633 CCTCGGAGGATAGATACCATCGA 60.371 52.174 19.57 0.00 37.67 3.59
3603 5092 3.607741 TCGGAGGATAGATACCATCGAC 58.392 50.000 0.00 0.00 32.66 4.20
3604 5093 3.263681 TCGGAGGATAGATACCATCGACT 59.736 47.826 0.00 0.00 32.66 4.18
3605 5094 4.468868 TCGGAGGATAGATACCATCGACTA 59.531 45.833 0.00 0.00 32.66 2.59
3606 5095 4.812091 CGGAGGATAGATACCATCGACTAG 59.188 50.000 0.00 0.00 0.00 2.57
3607 5096 5.395435 CGGAGGATAGATACCATCGACTAGA 60.395 48.000 0.00 0.00 0.00 2.43
3608 5097 6.597562 GGAGGATAGATACCATCGACTAGAT 58.402 44.000 0.00 0.00 41.01 1.98
3609 5098 7.471679 CGGAGGATAGATACCATCGACTAGATA 60.472 44.444 0.00 0.00 37.52 1.98
3610 5099 7.876068 GGAGGATAGATACCATCGACTAGATAG 59.124 44.444 0.00 0.00 37.52 2.08
3611 5100 8.326765 AGGATAGATACCATCGACTAGATAGT 57.673 38.462 0.00 0.00 37.52 2.12
3612 5101 9.436866 AGGATAGATACCATCGACTAGATAGTA 57.563 37.037 0.00 0.00 37.73 1.82
3613 5102 9.701098 GGATAGATACCATCGACTAGATAGTAG 57.299 40.741 0.00 0.00 37.00 2.57
3614 5103 9.199982 GATAGATACCATCGACTAGATAGTAGC 57.800 40.741 0.00 0.00 39.17 3.58
3615 5104 6.350906 AGATACCATCGACTAGATAGTAGCC 58.649 44.000 0.00 0.00 39.52 3.93
3616 5105 4.368565 ACCATCGACTAGATAGTAGCCA 57.631 45.455 0.00 0.00 37.52 4.75
3617 5106 4.726583 ACCATCGACTAGATAGTAGCCAA 58.273 43.478 0.00 0.00 37.52 4.52
3618 5107 5.138276 ACCATCGACTAGATAGTAGCCAAA 58.862 41.667 0.00 0.00 37.52 3.28
3619 5108 5.241949 ACCATCGACTAGATAGTAGCCAAAG 59.758 44.000 0.00 0.00 37.52 2.77
3620 5109 5.241949 CCATCGACTAGATAGTAGCCAAAGT 59.758 44.000 0.00 0.00 37.52 2.66
3621 5110 6.239064 CCATCGACTAGATAGTAGCCAAAGTT 60.239 42.308 0.00 0.00 37.52 2.66
3622 5111 6.132791 TCGACTAGATAGTAGCCAAAGTTG 57.867 41.667 0.00 0.00 36.50 3.16
3623 5112 5.651139 TCGACTAGATAGTAGCCAAAGTTGT 59.349 40.000 0.00 0.00 36.50 3.32
3624 5113 6.825213 TCGACTAGATAGTAGCCAAAGTTGTA 59.175 38.462 0.00 0.00 36.50 2.41
3625 5114 6.911511 CGACTAGATAGTAGCCAAAGTTGTAC 59.088 42.308 0.00 0.00 36.50 2.90
3626 5115 7.201714 CGACTAGATAGTAGCCAAAGTTGTACT 60.202 40.741 0.00 1.43 36.50 2.73
3627 5116 7.998580 ACTAGATAGTAGCCAAAGTTGTACTC 58.001 38.462 0.00 0.00 34.13 2.59
3628 5117 6.852420 AGATAGTAGCCAAAGTTGTACTCA 57.148 37.500 0.00 0.00 0.00 3.41
3629 5118 7.425224 AGATAGTAGCCAAAGTTGTACTCAT 57.575 36.000 0.00 0.00 0.00 2.90
3630 5119 7.268586 AGATAGTAGCCAAAGTTGTACTCATG 58.731 38.462 0.00 0.00 0.00 3.07
3631 5120 5.228945 AGTAGCCAAAGTTGTACTCATGT 57.771 39.130 0.00 0.00 0.00 3.21
3632 5121 5.238583 AGTAGCCAAAGTTGTACTCATGTC 58.761 41.667 0.00 0.00 0.00 3.06
3633 5122 3.412386 AGCCAAAGTTGTACTCATGTCC 58.588 45.455 0.00 0.00 0.00 4.02
3634 5123 3.146066 GCCAAAGTTGTACTCATGTCCA 58.854 45.455 0.00 0.00 0.00 4.02
3635 5124 3.758554 GCCAAAGTTGTACTCATGTCCAT 59.241 43.478 0.00 0.00 0.00 3.41
3636 5125 4.218417 GCCAAAGTTGTACTCATGTCCATT 59.782 41.667 0.00 0.00 0.00 3.16
3637 5126 5.702865 CCAAAGTTGTACTCATGTCCATTG 58.297 41.667 0.00 0.00 0.00 2.82
3638 5127 5.473162 CCAAAGTTGTACTCATGTCCATTGA 59.527 40.000 0.00 0.00 0.00 2.57
3639 5128 6.373779 CAAAGTTGTACTCATGTCCATTGAC 58.626 40.000 0.00 0.00 42.12 3.18
3650 5139 4.137116 TGTCCATTGACAGTATAGTGGC 57.863 45.455 12.20 9.52 46.40 5.01
3651 5140 3.517500 TGTCCATTGACAGTATAGTGGCA 59.482 43.478 12.33 12.33 46.40 4.92
3656 5145 4.471904 TTGACAGTATAGTGGCAAGGAG 57.528 45.455 22.55 0.00 40.69 3.69
3657 5146 2.766263 TGACAGTATAGTGGCAAGGAGG 59.234 50.000 13.98 0.00 30.23 4.30
3658 5147 3.031736 GACAGTATAGTGGCAAGGAGGA 58.968 50.000 8.65 0.00 0.00 3.71
3659 5148 3.034635 ACAGTATAGTGGCAAGGAGGAG 58.965 50.000 12.20 0.00 0.00 3.69
3660 5149 2.043227 AGTATAGTGGCAAGGAGGAGC 58.957 52.381 0.00 0.00 0.00 4.70
3661 5150 2.043227 GTATAGTGGCAAGGAGGAGCT 58.957 52.381 0.00 0.00 0.00 4.09
3662 5151 1.589414 ATAGTGGCAAGGAGGAGCTT 58.411 50.000 0.00 0.00 0.00 3.74
3663 5152 1.362224 TAGTGGCAAGGAGGAGCTTT 58.638 50.000 0.00 0.00 0.00 3.51
3664 5153 0.480252 AGTGGCAAGGAGGAGCTTTT 59.520 50.000 0.00 0.00 0.00 2.27
3665 5154 0.884514 GTGGCAAGGAGGAGCTTTTC 59.115 55.000 0.00 0.00 0.00 2.29
3676 5165 2.155279 GGAGCTTTTCCTTCAGTCACC 58.845 52.381 0.00 0.00 43.16 4.02
3677 5166 2.224646 GGAGCTTTTCCTTCAGTCACCT 60.225 50.000 0.00 0.00 43.16 4.00
3678 5167 3.481453 GAGCTTTTCCTTCAGTCACCTT 58.519 45.455 0.00 0.00 0.00 3.50
3679 5168 3.481453 AGCTTTTCCTTCAGTCACCTTC 58.519 45.455 0.00 0.00 0.00 3.46
3680 5169 2.224314 GCTTTTCCTTCAGTCACCTTCG 59.776 50.000 0.00 0.00 0.00 3.79
3681 5170 1.878953 TTTCCTTCAGTCACCTTCGC 58.121 50.000 0.00 0.00 0.00 4.70
3682 5171 0.756294 TTCCTTCAGTCACCTTCGCA 59.244 50.000 0.00 0.00 0.00 5.10
3683 5172 0.756294 TCCTTCAGTCACCTTCGCAA 59.244 50.000 0.00 0.00 0.00 4.85
3684 5173 1.140052 TCCTTCAGTCACCTTCGCAAA 59.860 47.619 0.00 0.00 0.00 3.68
3685 5174 1.264288 CCTTCAGTCACCTTCGCAAAC 59.736 52.381 0.00 0.00 0.00 2.93
3686 5175 1.939934 CTTCAGTCACCTTCGCAAACA 59.060 47.619 0.00 0.00 0.00 2.83
3687 5176 2.031258 TCAGTCACCTTCGCAAACAA 57.969 45.000 0.00 0.00 0.00 2.83
3688 5177 1.668751 TCAGTCACCTTCGCAAACAAC 59.331 47.619 0.00 0.00 0.00 3.32
3689 5178 0.655733 AGTCACCTTCGCAAACAACG 59.344 50.000 0.00 0.00 0.00 4.10
3690 5179 0.316689 GTCACCTTCGCAAACAACGG 60.317 55.000 0.00 0.00 0.00 4.44
3691 5180 0.745128 TCACCTTCGCAAACAACGGT 60.745 50.000 0.00 0.00 0.00 4.83
3692 5181 0.591236 CACCTTCGCAAACAACGGTG 60.591 55.000 0.00 0.00 36.36 4.94
3693 5182 0.745128 ACCTTCGCAAACAACGGTGA 60.745 50.000 7.88 0.00 0.00 4.02
3694 5183 0.591170 CCTTCGCAAACAACGGTGAT 59.409 50.000 7.88 0.00 0.00 3.06
3695 5184 1.001815 CCTTCGCAAACAACGGTGATT 60.002 47.619 7.88 0.00 0.00 2.57
3696 5185 2.043411 CTTCGCAAACAACGGTGATTG 58.957 47.619 18.21 18.21 39.77 2.67
3697 5186 1.018148 TCGCAAACAACGGTGATTGT 58.982 45.000 22.37 4.36 44.76 2.71
3702 5191 4.531708 CAACGGTGATTGTTGCGG 57.468 55.556 0.00 0.00 40.11 5.69
3703 5192 1.729131 CAACGGTGATTGTTGCGGC 60.729 57.895 0.00 0.00 40.11 6.53
3704 5193 2.190170 AACGGTGATTGTTGCGGCA 61.190 52.632 0.00 0.00 0.00 5.69
3705 5194 2.126888 CGGTGATTGTTGCGGCAC 60.127 61.111 0.05 0.00 0.00 5.01
3706 5195 2.902419 CGGTGATTGTTGCGGCACA 61.902 57.895 0.05 1.24 33.09 4.57
3707 5196 1.586028 GGTGATTGTTGCGGCACAT 59.414 52.632 0.05 0.00 33.09 3.21
3708 5197 0.038343 GGTGATTGTTGCGGCACATT 60.038 50.000 0.05 1.04 33.09 2.71
3709 5198 1.201181 GGTGATTGTTGCGGCACATTA 59.799 47.619 0.05 0.00 33.09 1.90
3710 5199 2.352225 GGTGATTGTTGCGGCACATTAA 60.352 45.455 0.05 0.00 33.09 1.40
3711 5200 3.510719 GTGATTGTTGCGGCACATTAAT 58.489 40.909 0.05 0.94 0.00 1.40
3712 5201 3.304026 GTGATTGTTGCGGCACATTAATG 59.696 43.478 14.01 14.01 0.00 1.90
3713 5202 3.056962 TGATTGTTGCGGCACATTAATGT 60.057 39.130 15.47 15.47 42.84 2.71
3714 5203 2.627863 TGTTGCGGCACATTAATGTC 57.372 45.000 18.25 12.56 39.39 3.06
3715 5204 1.882623 TGTTGCGGCACATTAATGTCA 59.117 42.857 18.25 10.48 39.39 3.58
3716 5205 2.491298 TGTTGCGGCACATTAATGTCAT 59.509 40.909 18.25 0.00 39.39 3.06
3717 5206 3.056962 TGTTGCGGCACATTAATGTCATT 60.057 39.130 18.25 3.06 39.39 2.57
3718 5207 3.148026 TGCGGCACATTAATGTCATTG 57.852 42.857 18.25 8.59 39.39 2.82
3719 5208 2.491298 TGCGGCACATTAATGTCATTGT 59.509 40.909 18.25 0.00 39.39 2.71
3720 5209 2.853594 GCGGCACATTAATGTCATTGTG 59.146 45.455 18.25 9.01 39.39 3.33
3721 5210 3.427368 GCGGCACATTAATGTCATTGTGA 60.427 43.478 18.25 1.60 41.50 3.58
3722 5211 4.345288 CGGCACATTAATGTCATTGTGAG 58.655 43.478 18.25 6.08 41.50 3.51
3723 5212 4.675510 GGCACATTAATGTCATTGTGAGG 58.324 43.478 18.25 5.39 41.50 3.86
3724 5213 4.107622 GCACATTAATGTCATTGTGAGGC 58.892 43.478 18.25 11.36 41.50 4.70
3725 5214 4.675510 CACATTAATGTCATTGTGAGGCC 58.324 43.478 18.25 0.00 41.50 5.19
3726 5215 3.701040 ACATTAATGTCATTGTGAGGCCC 59.299 43.478 15.47 0.00 35.87 5.80
3727 5216 2.036958 TAATGTCATTGTGAGGCCCG 57.963 50.000 8.39 0.00 0.00 6.13
3728 5217 0.680921 AATGTCATTGTGAGGCCCGG 60.681 55.000 0.00 0.00 0.00 5.73
3729 5218 1.561769 ATGTCATTGTGAGGCCCGGA 61.562 55.000 0.73 0.00 0.00 5.14
3730 5219 1.745489 GTCATTGTGAGGCCCGGAC 60.745 63.158 0.73 0.00 0.00 4.79
3731 5220 2.220586 TCATTGTGAGGCCCGGACA 61.221 57.895 0.73 0.00 0.00 4.02
3732 5221 1.077501 CATTGTGAGGCCCGGACAT 60.078 57.895 0.73 0.00 0.00 3.06
3733 5222 1.077501 ATTGTGAGGCCCGGACATG 60.078 57.895 0.73 0.00 0.00 3.21
3734 5223 3.918253 TTGTGAGGCCCGGACATGC 62.918 63.158 0.73 0.00 0.00 4.06
3735 5224 4.101448 GTGAGGCCCGGACATGCT 62.101 66.667 0.73 0.00 0.00 3.79
3736 5225 2.364973 TGAGGCCCGGACATGCTA 60.365 61.111 0.73 0.00 0.00 3.49
3737 5226 1.992834 TGAGGCCCGGACATGCTAA 60.993 57.895 0.73 0.00 0.00 3.09
3738 5227 1.223487 GAGGCCCGGACATGCTAAA 59.777 57.895 0.73 0.00 0.00 1.85
3739 5228 0.815615 GAGGCCCGGACATGCTAAAG 60.816 60.000 0.73 0.00 0.00 1.85
3740 5229 1.223487 GGCCCGGACATGCTAAAGA 59.777 57.895 0.73 0.00 0.00 2.52
3741 5230 0.393808 GGCCCGGACATGCTAAAGAA 60.394 55.000 0.73 0.00 0.00 2.52
3742 5231 1.459450 GCCCGGACATGCTAAAGAAA 58.541 50.000 0.73 0.00 0.00 2.52
3743 5232 1.401905 GCCCGGACATGCTAAAGAAAG 59.598 52.381 0.73 0.00 0.00 2.62
3744 5233 1.401905 CCCGGACATGCTAAAGAAAGC 59.598 52.381 0.73 0.00 43.08 3.51
3755 5244 4.357996 GCTAAAGAAAGCATGCAAGATCC 58.642 43.478 21.98 2.51 42.30 3.36
3756 5245 4.142315 GCTAAAGAAAGCATGCAAGATCCA 60.142 41.667 21.98 0.00 42.30 3.41
3757 5246 4.877378 AAAGAAAGCATGCAAGATCCAA 57.123 36.364 21.98 0.00 0.00 3.53
3758 5247 4.877378 AAGAAAGCATGCAAGATCCAAA 57.123 36.364 21.98 0.00 0.00 3.28
3759 5248 4.451629 AGAAAGCATGCAAGATCCAAAG 57.548 40.909 21.98 0.00 0.00 2.77
3760 5249 4.084287 AGAAAGCATGCAAGATCCAAAGA 58.916 39.130 21.98 0.00 0.00 2.52
3761 5250 4.710375 AGAAAGCATGCAAGATCCAAAGAT 59.290 37.500 21.98 0.00 34.57 2.40
3774 5263 4.707030 TCCAAAGATCATGTGATGCAAC 57.293 40.909 0.00 0.00 34.37 4.17
3775 5264 4.338012 TCCAAAGATCATGTGATGCAACT 58.662 39.130 0.00 0.00 34.37 3.16
3776 5265 4.768448 TCCAAAGATCATGTGATGCAACTT 59.232 37.500 0.00 0.00 34.37 2.66
3777 5266 4.862574 CCAAAGATCATGTGATGCAACTTG 59.137 41.667 0.00 0.00 34.37 3.16
3778 5267 5.466819 CAAAGATCATGTGATGCAACTTGT 58.533 37.500 0.00 0.00 34.37 3.16
3779 5268 5.717078 AAGATCATGTGATGCAACTTGTT 57.283 34.783 0.00 0.00 34.37 2.83
3780 5269 5.306532 AGATCATGTGATGCAACTTGTTC 57.693 39.130 0.00 0.00 34.37 3.18
3781 5270 4.763279 AGATCATGTGATGCAACTTGTTCA 59.237 37.500 13.62 1.07 34.37 3.18
3782 5271 4.227512 TCATGTGATGCAACTTGTTCAC 57.772 40.909 8.59 8.59 39.11 3.18
3783 5272 2.753989 TGTGATGCAACTTGTTCACG 57.246 45.000 10.40 0.00 41.02 4.35
3784 5273 2.284190 TGTGATGCAACTTGTTCACGA 58.716 42.857 10.40 0.00 41.02 4.35
3785 5274 2.680339 TGTGATGCAACTTGTTCACGAA 59.320 40.909 10.40 0.00 41.02 3.85
3786 5275 3.314913 TGTGATGCAACTTGTTCACGAAT 59.685 39.130 10.40 0.00 41.02 3.34
3787 5276 3.665409 GTGATGCAACTTGTTCACGAATG 59.335 43.478 0.00 0.00 30.29 2.67
3788 5277 3.563390 TGATGCAACTTGTTCACGAATGA 59.437 39.130 0.00 0.00 0.00 2.57
3789 5278 4.216042 TGATGCAACTTGTTCACGAATGAT 59.784 37.500 0.00 0.00 33.85 2.45
3790 5279 3.887741 TGCAACTTGTTCACGAATGATG 58.112 40.909 0.00 0.00 33.85 3.07
3791 5280 3.563390 TGCAACTTGTTCACGAATGATGA 59.437 39.130 0.00 0.00 33.85 2.92
3792 5281 4.216042 TGCAACTTGTTCACGAATGATGAT 59.784 37.500 0.00 0.00 33.85 2.45
3793 5282 4.556135 GCAACTTGTTCACGAATGATGATG 59.444 41.667 0.00 0.00 33.85 3.07
3794 5283 4.952262 ACTTGTTCACGAATGATGATGG 57.048 40.909 0.00 0.00 33.85 3.51
3795 5284 4.326826 ACTTGTTCACGAATGATGATGGT 58.673 39.130 0.00 0.00 33.85 3.55
3796 5285 4.393062 ACTTGTTCACGAATGATGATGGTC 59.607 41.667 0.00 0.00 33.85 4.02
3797 5286 4.206477 TGTTCACGAATGATGATGGTCT 57.794 40.909 0.00 0.00 33.85 3.85
3798 5287 4.578871 TGTTCACGAATGATGATGGTCTT 58.421 39.130 0.00 0.00 33.85 3.01
3799 5288 4.631377 TGTTCACGAATGATGATGGTCTTC 59.369 41.667 0.00 0.00 33.85 2.87
3800 5289 4.743057 TCACGAATGATGATGGTCTTCT 57.257 40.909 0.00 0.00 0.00 2.85
3801 5290 5.089970 TCACGAATGATGATGGTCTTCTT 57.910 39.130 0.00 0.00 0.00 2.52
3802 5291 6.220726 TCACGAATGATGATGGTCTTCTTA 57.779 37.500 0.00 0.00 0.00 2.10
3803 5292 6.639563 TCACGAATGATGATGGTCTTCTTAA 58.360 36.000 0.00 0.00 0.00 1.85
3804 5293 6.535150 TCACGAATGATGATGGTCTTCTTAAC 59.465 38.462 0.00 0.00 0.00 2.01
3805 5294 6.313658 CACGAATGATGATGGTCTTCTTAACA 59.686 38.462 0.00 0.00 0.00 2.41
3806 5295 7.011763 CACGAATGATGATGGTCTTCTTAACAT 59.988 37.037 0.00 0.00 0.00 2.71
3807 5296 7.011763 ACGAATGATGATGGTCTTCTTAACATG 59.988 37.037 0.00 0.00 0.00 3.21
3808 5297 7.225341 CGAATGATGATGGTCTTCTTAACATGA 59.775 37.037 0.00 0.00 0.00 3.07
3809 5298 7.798596 ATGATGATGGTCTTCTTAACATGAC 57.201 36.000 0.00 0.00 0.00 3.06
3810 5299 6.115446 TGATGATGGTCTTCTTAACATGACC 58.885 40.000 0.00 8.36 46.53 4.02
3811 5300 4.843728 TGATGGTCTTCTTAACATGACCC 58.156 43.478 11.62 1.15 45.98 4.46
3812 5301 4.536090 TGATGGTCTTCTTAACATGACCCT 59.464 41.667 11.62 4.03 45.98 4.34
3813 5302 4.286297 TGGTCTTCTTAACATGACCCTG 57.714 45.455 11.62 0.00 45.98 4.45
3814 5303 3.907474 TGGTCTTCTTAACATGACCCTGA 59.093 43.478 11.62 0.00 45.98 3.86
3815 5304 4.536090 TGGTCTTCTTAACATGACCCTGAT 59.464 41.667 11.62 0.00 45.98 2.90
3816 5305 5.724370 TGGTCTTCTTAACATGACCCTGATA 59.276 40.000 11.62 0.00 45.98 2.15
3817 5306 6.386927 TGGTCTTCTTAACATGACCCTGATAT 59.613 38.462 11.62 0.00 45.98 1.63
3818 5307 7.092444 TGGTCTTCTTAACATGACCCTGATATT 60.092 37.037 11.62 0.00 45.98 1.28
3819 5308 7.227512 GGTCTTCTTAACATGACCCTGATATTG 59.772 40.741 0.00 0.00 42.11 1.90
3820 5309 6.767902 TCTTCTTAACATGACCCTGATATTGC 59.232 38.462 0.00 0.00 0.00 3.56
3821 5310 5.376625 TCTTAACATGACCCTGATATTGCC 58.623 41.667 0.00 0.00 0.00 4.52
3822 5311 2.664402 ACATGACCCTGATATTGCCC 57.336 50.000 0.00 0.00 0.00 5.36
3823 5312 2.138542 ACATGACCCTGATATTGCCCT 58.861 47.619 0.00 0.00 0.00 5.19
3824 5313 2.515429 ACATGACCCTGATATTGCCCTT 59.485 45.455 0.00 0.00 0.00 3.95
3825 5314 2.734755 TGACCCTGATATTGCCCTTG 57.265 50.000 0.00 0.00 0.00 3.61
3826 5315 1.922447 TGACCCTGATATTGCCCTTGT 59.078 47.619 0.00 0.00 0.00 3.16
3827 5316 3.119319 TGACCCTGATATTGCCCTTGTA 58.881 45.455 0.00 0.00 0.00 2.41
3828 5317 3.525609 TGACCCTGATATTGCCCTTGTAA 59.474 43.478 0.00 0.00 0.00 2.41
3829 5318 4.017958 TGACCCTGATATTGCCCTTGTAAA 60.018 41.667 0.00 0.00 0.00 2.01
3830 5319 4.536765 ACCCTGATATTGCCCTTGTAAAG 58.463 43.478 0.00 0.00 45.69 1.85
3831 5320 3.319122 CCCTGATATTGCCCTTGTAAAGC 59.681 47.826 0.00 0.00 44.44 3.51
3832 5321 3.319122 CCTGATATTGCCCTTGTAAAGCC 59.681 47.826 0.00 0.00 44.44 4.35
3833 5322 4.210331 CTGATATTGCCCTTGTAAAGCCT 58.790 43.478 0.00 0.00 44.44 4.58
3834 5323 4.609301 TGATATTGCCCTTGTAAAGCCTT 58.391 39.130 0.00 0.00 44.44 4.35
3835 5324 4.644685 TGATATTGCCCTTGTAAAGCCTTC 59.355 41.667 0.00 0.00 44.44 3.46
3836 5325 1.627864 TTGCCCTTGTAAAGCCTTCC 58.372 50.000 0.00 0.00 44.44 3.46
3837 5326 0.608035 TGCCCTTGTAAAGCCTTCCG 60.608 55.000 0.00 0.00 44.44 4.30
3838 5327 1.313091 GCCCTTGTAAAGCCTTCCGG 61.313 60.000 0.00 0.00 44.44 5.14
3868 5357 4.608073 GCAATTTCAATGCATGCAATCA 57.392 36.364 26.68 0.00 43.29 2.57
3869 5358 4.975788 GCAATTTCAATGCATGCAATCAA 58.024 34.783 26.68 15.17 43.29 2.57
3870 5359 5.027737 GCAATTTCAATGCATGCAATCAAG 58.972 37.500 26.68 12.65 43.29 3.02
3871 5360 5.163804 GCAATTTCAATGCATGCAATCAAGA 60.164 36.000 26.68 14.77 43.29 3.02
3872 5361 6.477742 CAATTTCAATGCATGCAATCAAGAG 58.522 36.000 26.68 3.91 0.00 2.85
3873 5362 5.394224 TTTCAATGCATGCAATCAAGAGA 57.606 34.783 26.68 6.55 0.00 3.10
3874 5363 5.592104 TTCAATGCATGCAATCAAGAGAT 57.408 34.783 26.68 0.80 35.53 2.75
3875 5364 5.183014 TCAATGCATGCAATCAAGAGATC 57.817 39.130 26.68 0.00 31.90 2.75
3876 5365 4.037565 TCAATGCATGCAATCAAGAGATCC 59.962 41.667 26.68 0.00 31.90 3.36
3877 5366 3.007473 TGCATGCAATCAAGAGATCCA 57.993 42.857 20.30 0.00 31.90 3.41
3878 5367 3.358118 TGCATGCAATCAAGAGATCCAA 58.642 40.909 20.30 0.00 31.90 3.53
3879 5368 3.380320 TGCATGCAATCAAGAGATCCAAG 59.620 43.478 20.30 0.00 31.90 3.61
3880 5369 3.795826 GCATGCAATCAAGAGATCCAAGC 60.796 47.826 14.21 0.00 31.90 4.01
3881 5370 3.076079 TGCAATCAAGAGATCCAAGCA 57.924 42.857 0.00 0.00 31.90 3.91
3882 5371 3.423749 TGCAATCAAGAGATCCAAGCAA 58.576 40.909 0.00 0.00 31.90 3.91
3883 5372 3.827876 TGCAATCAAGAGATCCAAGCAAA 59.172 39.130 0.00 0.00 31.90 3.68
3884 5373 4.171754 GCAATCAAGAGATCCAAGCAAAC 58.828 43.478 0.00 0.00 31.90 2.93
3885 5374 4.082354 GCAATCAAGAGATCCAAGCAAACT 60.082 41.667 0.00 0.00 31.90 2.66
3886 5375 5.566230 GCAATCAAGAGATCCAAGCAAACTT 60.566 40.000 0.00 0.00 32.09 2.66
3887 5376 5.862323 CAATCAAGAGATCCAAGCAAACTTG 59.138 40.000 0.00 0.00 42.43 3.16
3894 5383 3.549730 AAGCAAACTTGGCCACCC 58.450 55.556 3.88 0.00 33.84 4.61
3895 5384 1.075301 AAGCAAACTTGGCCACCCT 60.075 52.632 3.88 0.00 33.84 4.34
3896 5385 1.115326 AAGCAAACTTGGCCACCCTC 61.115 55.000 3.88 0.00 33.84 4.30
3897 5386 1.531602 GCAAACTTGGCCACCCTCT 60.532 57.895 3.88 0.00 0.00 3.69
3898 5387 1.115326 GCAAACTTGGCCACCCTCTT 61.115 55.000 3.88 0.00 0.00 2.85
3899 5388 1.821666 GCAAACTTGGCCACCCTCTTA 60.822 52.381 3.88 0.00 0.00 2.10
3900 5389 1.886542 CAAACTTGGCCACCCTCTTAC 59.113 52.381 3.88 0.00 0.00 2.34
3901 5390 1.446016 AACTTGGCCACCCTCTTACT 58.554 50.000 3.88 0.00 0.00 2.24
3902 5391 1.446016 ACTTGGCCACCCTCTTACTT 58.554 50.000 3.88 0.00 0.00 2.24
3903 5392 2.627933 ACTTGGCCACCCTCTTACTTA 58.372 47.619 3.88 0.00 0.00 2.24
3904 5393 3.190439 ACTTGGCCACCCTCTTACTTAT 58.810 45.455 3.88 0.00 0.00 1.73
3905 5394 3.054361 ACTTGGCCACCCTCTTACTTATG 60.054 47.826 3.88 0.00 0.00 1.90
3906 5395 2.840511 TGGCCACCCTCTTACTTATGA 58.159 47.619 0.00 0.00 0.00 2.15
3907 5396 2.771943 TGGCCACCCTCTTACTTATGAG 59.228 50.000 0.00 0.00 0.00 2.90
3908 5397 3.039011 GGCCACCCTCTTACTTATGAGA 58.961 50.000 0.00 0.00 32.44 3.27
3909 5398 3.648545 GGCCACCCTCTTACTTATGAGAT 59.351 47.826 0.00 0.00 32.44 2.75
3910 5399 4.103311 GGCCACCCTCTTACTTATGAGATT 59.897 45.833 0.00 0.00 32.44 2.40
3911 5400 5.059833 GCCACCCTCTTACTTATGAGATTG 58.940 45.833 0.00 0.00 32.44 2.67
3912 5401 5.059833 CCACCCTCTTACTTATGAGATTGC 58.940 45.833 0.00 0.00 32.44 3.56
3913 5402 5.059833 CACCCTCTTACTTATGAGATTGCC 58.940 45.833 0.00 0.00 32.44 4.52
3914 5403 4.721776 ACCCTCTTACTTATGAGATTGCCA 59.278 41.667 0.00 0.00 32.44 4.92
3915 5404 5.191722 ACCCTCTTACTTATGAGATTGCCAA 59.808 40.000 0.00 0.00 32.44 4.52
3916 5405 5.762218 CCCTCTTACTTATGAGATTGCCAAG 59.238 44.000 0.00 0.00 32.44 3.61
3917 5406 6.408548 CCCTCTTACTTATGAGATTGCCAAGA 60.409 42.308 0.00 0.00 32.44 3.02
3918 5407 6.705381 CCTCTTACTTATGAGATTGCCAAGAG 59.295 42.308 0.00 0.00 37.36 2.85
3919 5408 6.051717 TCTTACTTATGAGATTGCCAAGAGC 58.948 40.000 0.00 0.00 44.14 4.09
3920 5409 3.549794 ACTTATGAGATTGCCAAGAGCC 58.450 45.455 0.00 0.00 42.71 4.70
3921 5410 3.201708 ACTTATGAGATTGCCAAGAGCCT 59.798 43.478 0.00 0.00 42.71 4.58
3922 5411 2.345124 ATGAGATTGCCAAGAGCCTC 57.655 50.000 0.00 0.00 42.71 4.70
3923 5412 1.283347 TGAGATTGCCAAGAGCCTCT 58.717 50.000 0.00 0.00 42.71 3.69
3924 5413 1.209019 TGAGATTGCCAAGAGCCTCTC 59.791 52.381 0.00 0.00 44.06 3.20
3925 5414 0.177604 AGATTGCCAAGAGCCTCTCG 59.822 55.000 0.00 0.00 42.71 4.04
3926 5415 0.813210 GATTGCCAAGAGCCTCTCGG 60.813 60.000 0.00 0.00 42.71 4.63
3927 5416 1.557269 ATTGCCAAGAGCCTCTCGGT 61.557 55.000 0.00 0.00 42.71 4.69
3928 5417 2.125350 GCCAAGAGCCTCTCGGTG 60.125 66.667 0.00 0.00 35.36 4.94
3929 5418 2.948720 GCCAAGAGCCTCTCGGTGT 61.949 63.158 0.00 0.00 35.36 4.16
3930 5419 1.674057 CCAAGAGCCTCTCGGTGTT 59.326 57.895 0.00 0.00 35.36 3.32
3931 5420 0.035458 CCAAGAGCCTCTCGGTGTTT 59.965 55.000 0.00 0.00 35.36 2.83
3932 5421 1.151668 CAAGAGCCTCTCGGTGTTTG 58.848 55.000 0.00 0.00 35.36 2.93
3933 5422 0.603975 AAGAGCCTCTCGGTGTTTGC 60.604 55.000 0.00 0.00 35.36 3.68
3934 5423 2.032681 AGCCTCTCGGTGTTTGCC 59.967 61.111 0.00 0.00 0.00 4.52
3935 5424 2.281484 GCCTCTCGGTGTTTGCCA 60.281 61.111 0.00 0.00 0.00 4.92
3936 5425 2.617274 GCCTCTCGGTGTTTGCCAC 61.617 63.158 0.00 0.00 43.74 5.01
3937 5426 1.227823 CCTCTCGGTGTTTGCCACA 60.228 57.895 0.00 0.00 46.44 4.17
3938 5427 1.230635 CCTCTCGGTGTTTGCCACAG 61.231 60.000 0.00 0.00 46.44 3.66
3939 5428 0.532862 CTCTCGGTGTTTGCCACAGT 60.533 55.000 0.00 0.00 46.44 3.55
3940 5429 0.107410 TCTCGGTGTTTGCCACAGTT 60.107 50.000 0.00 0.00 46.44 3.16
3941 5430 0.029300 CTCGGTGTTTGCCACAGTTG 59.971 55.000 0.00 0.00 46.44 3.16
3942 5431 1.065600 CGGTGTTTGCCACAGTTGG 59.934 57.895 0.00 0.00 46.44 3.77
3943 5432 1.662438 CGGTGTTTGCCACAGTTGGT 61.662 55.000 0.00 0.00 46.44 3.67
3944 5433 0.534873 GGTGTTTGCCACAGTTGGTT 59.465 50.000 0.00 0.00 46.44 3.67
3945 5434 1.470805 GGTGTTTGCCACAGTTGGTTC 60.471 52.381 0.00 0.00 46.44 3.62
3946 5435 1.476488 GTGTTTGCCACAGTTGGTTCT 59.524 47.619 0.00 0.00 45.98 3.01
3947 5436 1.748493 TGTTTGCCACAGTTGGTTCTC 59.252 47.619 0.00 0.00 45.98 2.87
3948 5437 2.024414 GTTTGCCACAGTTGGTTCTCT 58.976 47.619 0.00 0.00 45.98 3.10
3949 5438 1.967319 TTGCCACAGTTGGTTCTCTC 58.033 50.000 0.00 0.00 45.98 3.20
3950 5439 0.836606 TGCCACAGTTGGTTCTCTCA 59.163 50.000 0.00 0.00 45.98 3.27
3951 5440 1.202687 TGCCACAGTTGGTTCTCTCAG 60.203 52.381 0.00 0.00 45.98 3.35
3952 5441 1.879796 GCCACAGTTGGTTCTCTCAGG 60.880 57.143 0.00 0.00 45.98 3.86
3953 5442 1.417890 CCACAGTTGGTTCTCTCAGGT 59.582 52.381 0.00 0.00 38.23 4.00
3954 5443 2.632996 CCACAGTTGGTTCTCTCAGGTA 59.367 50.000 0.00 0.00 38.23 3.08
3955 5444 3.555168 CCACAGTTGGTTCTCTCAGGTAC 60.555 52.174 0.00 0.00 38.23 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 7.040478 GCCTCTCTACTCTATGATAGGCATATG 60.040 44.444 12.44 0.00 45.82 1.78
86 87 3.119919 GCTTTGTCTCAGAATGCTCAAGG 60.120 47.826 0.00 0.00 34.76 3.61
87 88 3.424565 CGCTTTGTCTCAGAATGCTCAAG 60.425 47.826 0.00 0.00 34.76 3.02
92 93 1.135859 CACCGCTTTGTCTCAGAATGC 60.136 52.381 0.00 0.00 34.76 3.56
93 94 1.466167 CCACCGCTTTGTCTCAGAATG 59.534 52.381 0.00 0.00 37.54 2.67
94 95 1.347707 TCCACCGCTTTGTCTCAGAAT 59.652 47.619 0.00 0.00 0.00 2.40
96 97 0.976641 ATCCACCGCTTTGTCTCAGA 59.023 50.000 0.00 0.00 0.00 3.27
98 99 0.396435 ACATCCACCGCTTTGTCTCA 59.604 50.000 0.00 0.00 0.00 3.27
101 102 0.605319 TCCACATCCACCGCTTTGTC 60.605 55.000 0.00 0.00 0.00 3.18
103 104 0.452987 CATCCACATCCACCGCTTTG 59.547 55.000 0.00 0.00 0.00 2.77
104 105 0.038166 ACATCCACATCCACCGCTTT 59.962 50.000 0.00 0.00 0.00 3.51
106 107 1.078214 CACATCCACATCCACCGCT 60.078 57.895 0.00 0.00 0.00 5.52
107 108 2.114670 CCACATCCACATCCACCGC 61.115 63.158 0.00 0.00 0.00 5.68
108 109 0.744414 GACCACATCCACATCCACCG 60.744 60.000 0.00 0.00 0.00 4.94
109 110 0.327924 TGACCACATCCACATCCACC 59.672 55.000 0.00 0.00 0.00 4.61
111 112 0.327924 GGTGACCACATCCACATCCA 59.672 55.000 0.00 0.00 35.13 3.41
112 113 0.620556 AGGTGACCACATCCACATCC 59.379 55.000 3.63 0.00 35.13 3.51
113 114 2.766263 TCTAGGTGACCACATCCACATC 59.234 50.000 3.63 0.00 35.13 3.06
115 116 2.319025 TCTAGGTGACCACATCCACA 57.681 50.000 3.63 0.00 35.13 4.17
116 117 3.034635 AGATCTAGGTGACCACATCCAC 58.965 50.000 3.63 0.00 0.00 4.02
117 118 3.404869 AGATCTAGGTGACCACATCCA 57.595 47.619 3.63 0.00 0.00 3.41
118 119 5.046950 GGATTAGATCTAGGTGACCACATCC 60.047 48.000 3.63 5.67 0.00 3.51
119 120 5.777732 AGGATTAGATCTAGGTGACCACATC 59.222 44.000 3.63 1.74 0.00 3.06
120 121 5.541868 CAGGATTAGATCTAGGTGACCACAT 59.458 44.000 3.63 0.00 0.00 3.21
121 122 4.895889 CAGGATTAGATCTAGGTGACCACA 59.104 45.833 3.63 0.00 0.00 4.17
122 123 4.282195 CCAGGATTAGATCTAGGTGACCAC 59.718 50.000 3.63 0.00 0.00 4.16
123 124 4.483950 CCAGGATTAGATCTAGGTGACCA 58.516 47.826 3.63 0.00 0.00 4.02
124 125 3.259625 GCCAGGATTAGATCTAGGTGACC 59.740 52.174 2.02 0.00 0.00 4.02
131 132 5.960811 CCTTATGAGGCCAGGATTAGATCTA 59.039 44.000 5.01 0.00 35.94 1.98
162 163 6.918022 GTGTGATGGGTTGTAAAGAAGAAAAG 59.082 38.462 0.00 0.00 0.00 2.27
223 409 0.251297 CCATCTCAGTTTGCCCCACA 60.251 55.000 0.00 0.00 0.00 4.17
244 430 6.818644 GCTTCATAAGAGTCTGTAATGTTCCA 59.181 38.462 0.00 0.00 0.00 3.53
247 433 7.148340 GCAAGCTTCATAAGAGTCTGTAATGTT 60.148 37.037 0.00 0.00 0.00 2.71
248 434 6.314896 GCAAGCTTCATAAGAGTCTGTAATGT 59.685 38.462 0.00 0.00 0.00 2.71
249 435 6.538021 AGCAAGCTTCATAAGAGTCTGTAATG 59.462 38.462 0.00 0.00 0.00 1.90
283 494 5.045066 AGGGAAGCATGTGCATATATCTCAT 60.045 40.000 7.83 0.00 45.16 2.90
349 564 5.507985 GCTTTGTTTTAGAGCAATCACTGGT 60.508 40.000 0.00 0.00 38.89 4.00
403 1116 6.218019 TGATCACATTCTTCTTTGCCTTTTG 58.782 36.000 0.00 0.00 0.00 2.44
445 1158 7.756722 GTGTTCGTTGTAATACTGGTACATACT 59.243 37.037 0.00 0.00 38.20 2.12
447 1160 7.541783 GTGTGTTCGTTGTAATACTGGTACATA 59.458 37.037 0.00 0.00 38.20 2.29
456 1169 5.910637 TCCTTGTGTGTTCGTTGTAATAC 57.089 39.130 0.00 0.00 0.00 1.89
536 1307 0.244450 TGTTCGTGGTACGGTGATCC 59.756 55.000 1.24 0.00 42.81 3.36
541 1312 0.316204 CCTCTTGTTCGTGGTACGGT 59.684 55.000 1.24 0.00 42.81 4.83
545 1316 1.689813 TCTTGCCTCTTGTTCGTGGTA 59.310 47.619 0.00 0.00 0.00 3.25
547 1318 1.593196 TTCTTGCCTCTTGTTCGTGG 58.407 50.000 0.00 0.00 0.00 4.94
548 1319 3.365364 GGAATTCTTGCCTCTTGTTCGTG 60.365 47.826 5.23 0.00 0.00 4.35
549 1320 2.814336 GGAATTCTTGCCTCTTGTTCGT 59.186 45.455 5.23 0.00 0.00 3.85
550 1321 3.077359 AGGAATTCTTGCCTCTTGTTCG 58.923 45.455 5.23 0.00 0.00 3.95
551 1322 4.693538 GAGGAATTCTTGCCTCTTGTTC 57.306 45.455 5.23 0.00 45.72 3.18
594 1365 9.635404 TCTTTACCTTTGTTTTTAGGATTCTCA 57.365 29.630 0.00 0.00 35.45 3.27
637 1408 2.160417 CCCTGCTCTCAATCGAAACAAC 59.840 50.000 0.00 0.00 0.00 3.32
693 1464 2.421424 AGAGCTTTCATTTGATGCCGTC 59.579 45.455 0.00 0.00 0.00 4.79
698 1469 4.384846 GCACAACAGAGCTTTCATTTGATG 59.615 41.667 0.00 0.00 0.00 3.07
720 1491 2.981140 GAGAGAGTACGACAACTTGTGC 59.019 50.000 0.00 0.00 0.00 4.57
738 1513 9.753674 AATATGTGAAGTAAAAGGAAATGGAGA 57.246 29.630 0.00 0.00 0.00 3.71
745 1520 7.593273 CGCAACAAATATGTGAAGTAAAAGGAA 59.407 33.333 0.00 0.00 40.46 3.36
756 1531 3.580731 TCGAGACGCAACAAATATGTGA 58.419 40.909 0.00 0.00 40.46 3.58
770 1545 4.374707 CGTTGGAAAGTTTAACTCGAGACG 60.375 45.833 21.68 9.71 0.00 4.18
780 1555 7.600960 ACTTTGGTTAAACGTTGGAAAGTTTA 58.399 30.769 0.00 6.56 40.54 2.01
838 1613 6.535540 TGCCTTTGTGATGTAAAGTAGGTTA 58.464 36.000 0.00 0.00 34.20 2.85
882 2075 9.212641 GGATGACCATATATATACATGATGCAC 57.787 37.037 2.43 0.00 35.97 4.57
985 2256 0.529833 CCCATGCATGCGGTGTTTTA 59.470 50.000 21.69 0.00 0.00 1.52
1014 2296 0.528901 CATCCCACCATTGCATTGCG 60.529 55.000 3.84 0.18 0.00 4.85
1047 2329 0.536006 GGCTGCACAAGACAAGGACT 60.536 55.000 0.50 0.00 32.10 3.85
1069 2351 6.941857 AGAAGAAGAGGAAGAACTGGATAAC 58.058 40.000 0.00 0.00 0.00 1.89
1070 2352 6.957020 AGAGAAGAAGAGGAAGAACTGGATAA 59.043 38.462 0.00 0.00 0.00 1.75
1072 2354 5.187576 CAGAGAAGAAGAGGAAGAACTGGAT 59.812 44.000 0.00 0.00 0.00 3.41
1088 2370 1.371183 CGCACCCAACCAGAGAAGA 59.629 57.895 0.00 0.00 0.00 2.87
1161 2443 3.405093 GATCGCCAGTGCATCCCCA 62.405 63.158 0.00 0.00 37.32 4.96
1226 2508 1.899437 GAGGGCGTCACTCCCATCAA 61.899 60.000 5.41 0.00 46.36 2.57
1230 2512 4.671590 TCGAGGGCGTCACTCCCA 62.672 66.667 5.41 0.00 46.36 4.37
1236 2518 0.823769 ATATGAGCTCGAGGGCGTCA 60.824 55.000 15.58 7.74 38.98 4.35
1295 2577 1.737838 TTCGAGGCTGTAGGCAATTG 58.262 50.000 8.22 0.00 44.01 2.32
1298 2580 1.202710 TGTTTTCGAGGCTGTAGGCAA 60.203 47.619 8.22 0.00 44.01 4.52
1325 2616 2.819608 GTTATGGCATACCGCATCCATT 59.180 45.455 6.72 0.00 45.17 3.16
1336 2627 1.493022 GGACACCAGGGTTATGGCATA 59.507 52.381 2.32 2.32 44.80 3.14
1360 2651 1.019278 ATGTACAAGGCAACCGCGAG 61.019 55.000 8.23 0.00 39.92 5.03
1368 2659 5.647658 CCAATTGTAGAAGATGTACAAGGCA 59.352 40.000 0.00 0.00 42.23 4.75
1385 2676 0.540365 CTGCCCAGACCACCAATTGT 60.540 55.000 4.43 0.00 0.00 2.71
1389 2680 1.059584 TCTTCTGCCCAGACCACCAA 61.060 55.000 0.00 0.00 37.14 3.67
1446 2737 7.232118 TGACTTCTCACTGAACTTGATGATA 57.768 36.000 0.00 0.00 0.00 2.15
1450 2741 5.243981 CCATGACTTCTCACTGAACTTGAT 58.756 41.667 0.00 0.00 0.00 2.57
1468 2759 2.586245 CCTCTTGAGCGCCCATGA 59.414 61.111 2.29 5.39 0.00 3.07
1476 2767 0.035056 TAAAGCTGGCCCTCTTGAGC 60.035 55.000 0.00 0.10 0.00 4.26
1527 2818 6.595682 TGGAGGAATGGATCTATTTTCACTC 58.404 40.000 5.71 10.66 0.00 3.51
1530 2821 9.524496 CAATATGGAGGAATGGATCTATTTTCA 57.476 33.333 5.71 0.00 0.00 2.69
1553 2844 1.541147 CCGAAGTGCACAATGTCCAAT 59.459 47.619 21.04 0.00 0.00 3.16
1588 2879 5.047802 CCTCTCCTTTATGCTTTGCTGAAAA 60.048 40.000 0.00 0.00 0.00 2.29
1602 2893 5.130350 CAGTGGTGTTTTTCCTCTCCTTTA 58.870 41.667 0.00 0.00 0.00 1.85
1615 2909 2.094234 GTGAAAGGTTGCAGTGGTGTTT 60.094 45.455 0.00 0.00 0.00 2.83
1623 2918 3.629398 AGTCTTCAAGTGAAAGGTTGCAG 59.371 43.478 0.00 0.00 33.07 4.41
1651 2946 3.814842 TGTACAATCTTGTGTGCCTCTTG 59.185 43.478 5.84 0.00 42.31 3.02
1660 2955 3.679980 CCCGTCTCTTGTACAATCTTGTG 59.320 47.826 9.13 0.00 42.31 3.33
1662 2957 3.056107 TCCCCGTCTCTTGTACAATCTTG 60.056 47.826 9.13 0.00 0.00 3.02
1686 2996 2.497273 AGCTGCTTTTTGGTCACTTGTT 59.503 40.909 0.00 0.00 0.00 2.83
1687 2997 2.102578 AGCTGCTTTTTGGTCACTTGT 58.897 42.857 0.00 0.00 0.00 3.16
1702 3012 5.559035 CGGCAGTAAACTTGATAATAGCTGC 60.559 44.000 0.00 0.00 43.98 5.25
1707 3017 6.575267 TGTAGCGGCAGTAAACTTGATAATA 58.425 36.000 1.45 0.00 0.00 0.98
1721 3031 1.134818 TGTAGTCCATTGTAGCGGCAG 60.135 52.381 1.45 0.00 0.00 4.85
1772 3086 6.946165 AGATAGTTGAGACGAACATAGTACG 58.054 40.000 0.00 0.00 0.00 3.67
1778 3092 7.548097 ACATTGTAGATAGTTGAGACGAACAT 58.452 34.615 0.00 0.00 0.00 2.71
1788 3102 6.655003 ACTGGTGGAAACATTGTAGATAGTTG 59.345 38.462 0.00 0.00 46.14 3.16
1800 3114 1.628340 TCATCCGACTGGTGGAAACAT 59.372 47.619 0.00 0.00 46.14 2.71
1802 3116 1.439679 GTCATCCGACTGGTGGAAAC 58.560 55.000 0.00 0.00 39.39 2.78
1808 3122 1.676529 CATACTCGTCATCCGACTGGT 59.323 52.381 0.00 0.00 41.60 4.00
1810 3124 1.947456 TCCATACTCGTCATCCGACTG 59.053 52.381 0.00 0.00 41.60 3.51
1814 3128 1.404035 TGTGTCCATACTCGTCATCCG 59.596 52.381 0.00 0.00 38.13 4.18
1839 3153 8.964476 ATGTATTCCTAATCCACACTTGTAAG 57.036 34.615 0.00 0.00 0.00 2.34
1844 3158 7.939039 CACCATATGTATTCCTAATCCACACTT 59.061 37.037 1.24 0.00 0.00 3.16
1845 3159 7.453393 CACCATATGTATTCCTAATCCACACT 58.547 38.462 1.24 0.00 0.00 3.55
1846 3160 6.149474 GCACCATATGTATTCCTAATCCACAC 59.851 42.308 1.24 0.00 0.00 3.82
1908 3222 0.466922 ATAACCATGAGCAGCAGCCC 60.467 55.000 0.00 0.00 43.56 5.19
1938 3252 1.274703 CCAGGGAAGCTAAGGCCAGA 61.275 60.000 5.01 0.00 39.73 3.86
2042 3356 4.210331 GAGCAACCAGGGTGATAATTGAT 58.790 43.478 9.41 0.00 0.00 2.57
2049 3363 2.671070 CCGAGCAACCAGGGTGAT 59.329 61.111 9.41 0.00 0.00 3.06
2069 3395 2.476051 CGCACCACATCTCGCAAC 59.524 61.111 0.00 0.00 0.00 4.17
2174 3506 5.754890 GGACACATGAAAGCAACAATTTTCT 59.245 36.000 0.00 0.00 35.02 2.52
2305 3640 1.961394 TCTGTATGCGGTAGGATCACC 59.039 52.381 0.00 0.00 35.04 4.02
2317 3658 9.674824 CCTGAAATTATTGAATCTTCTGTATGC 57.325 33.333 0.00 0.00 0.00 3.14
2460 3819 1.144913 CCACTTGGACCTTGGGAGAAA 59.855 52.381 0.00 0.00 37.39 2.52
2462 3821 0.104672 TCCACTTGGACCTTGGGAGA 60.105 55.000 0.00 0.00 39.78 3.71
2534 3896 1.257750 TAGCATCTCAGGGCACACGT 61.258 55.000 0.00 0.00 0.00 4.49
2577 3939 4.961435 TTCATCGCAAGCATATGTGAAA 57.039 36.364 4.29 0.00 42.57 2.69
2584 3946 4.035558 GTCCTTGATTTCATCGCAAGCATA 59.964 41.667 0.00 0.00 38.10 3.14
2585 3947 3.018856 TCCTTGATTTCATCGCAAGCAT 58.981 40.909 0.00 0.00 38.10 3.79
2598 3960 3.600388 GTCCGTGAGAATGTCCTTGATT 58.400 45.455 0.00 0.00 0.00 2.57
2658 4020 9.739276 ACTCCTTTAAGTTGATCATGTTTCATA 57.261 29.630 0.00 0.00 0.00 2.15
2712 4080 0.615331 GGTGTTCCATGAGCTCCTCA 59.385 55.000 12.15 0.00 44.99 3.86
2713 4081 0.107459 GGGTGTTCCATGAGCTCCTC 60.107 60.000 12.15 0.00 35.00 3.71
2859 4227 2.649331 ACGACCATAAGAACCAGACG 57.351 50.000 0.00 0.00 0.00 4.18
3001 4429 9.305555 AGGAAAATGAATGAAGAGAAAATCAGA 57.694 29.630 0.00 0.00 0.00 3.27
3020 4448 6.016276 ACGCACTCAACTCAAAATAGGAAAAT 60.016 34.615 0.00 0.00 0.00 1.82
3188 4621 2.286523 ACAGCTAGAACCAGGCGCT 61.287 57.895 7.64 0.00 0.00 5.92
3196 4629 0.253044 TGCCATCCCACAGCTAGAAC 59.747 55.000 0.00 0.00 0.00 3.01
3219 4652 2.033299 CGGCGCCATGATTCTTTTGTAT 59.967 45.455 28.98 0.00 0.00 2.29
3317 4772 1.076024 AGACAAGTTGGGGCACATCAT 59.924 47.619 7.96 0.00 0.00 2.45
3378 4856 8.454106 ACAGTTTAGAAGTAATGCTAGCAAATG 58.546 33.333 23.54 12.65 0.00 2.32
3560 5049 1.202031 GGCTTCTTAACATCCGCAACG 60.202 52.381 0.00 0.00 0.00 4.10
3565 5054 1.571919 CGAGGGCTTCTTAACATCCG 58.428 55.000 0.00 0.00 0.00 4.18
3566 5055 1.485066 TCCGAGGGCTTCTTAACATCC 59.515 52.381 0.00 0.00 0.00 3.51
3575 5064 1.931635 ATCTATCCTCCGAGGGCTTC 58.068 55.000 14.76 0.00 35.59 3.86
3576 5065 2.557901 GGTATCTATCCTCCGAGGGCTT 60.558 54.545 14.76 2.99 35.59 4.35
3577 5066 1.006162 GGTATCTATCCTCCGAGGGCT 59.994 57.143 14.76 5.25 35.59 5.19
3578 5067 1.272536 TGGTATCTATCCTCCGAGGGC 60.273 57.143 14.76 0.00 35.59 5.19
3579 5068 2.901338 TGGTATCTATCCTCCGAGGG 57.099 55.000 14.76 0.00 35.59 4.30
3580 5069 2.946329 CGATGGTATCTATCCTCCGAGG 59.054 54.545 8.30 8.30 36.46 4.63
3581 5070 3.623960 GTCGATGGTATCTATCCTCCGAG 59.376 52.174 0.00 0.00 33.36 4.63
3582 5071 3.263681 AGTCGATGGTATCTATCCTCCGA 59.736 47.826 0.00 0.00 0.00 4.55
3583 5072 3.611970 AGTCGATGGTATCTATCCTCCG 58.388 50.000 0.00 0.00 0.00 4.63
3584 5073 5.991861 TCTAGTCGATGGTATCTATCCTCC 58.008 45.833 0.00 0.00 0.00 4.30
3585 5074 8.426489 ACTATCTAGTCGATGGTATCTATCCTC 58.574 40.741 0.00 0.00 41.44 3.71
3586 5075 8.326765 ACTATCTAGTCGATGGTATCTATCCT 57.673 38.462 0.00 0.00 41.44 3.24
3587 5076 9.701098 CTACTATCTAGTCGATGGTATCTATCC 57.299 40.741 2.01 0.00 42.77 2.59
3588 5077 9.199982 GCTACTATCTAGTCGATGGTATCTATC 57.800 40.741 2.01 0.00 42.77 2.08
3589 5078 8.152246 GGCTACTATCTAGTCGATGGTATCTAT 58.848 40.741 2.01 0.00 42.77 1.98
3590 5079 7.125356 TGGCTACTATCTAGTCGATGGTATCTA 59.875 40.741 2.01 0.00 42.77 1.98
3591 5080 6.070136 TGGCTACTATCTAGTCGATGGTATCT 60.070 42.308 2.01 0.00 42.77 1.98
3592 5081 6.114089 TGGCTACTATCTAGTCGATGGTATC 58.886 44.000 2.01 0.00 42.77 2.24
3593 5082 6.063496 TGGCTACTATCTAGTCGATGGTAT 57.937 41.667 2.01 0.00 42.77 2.73
3594 5083 5.494390 TGGCTACTATCTAGTCGATGGTA 57.506 43.478 0.00 1.70 41.44 3.25
3595 5084 4.368565 TGGCTACTATCTAGTCGATGGT 57.631 45.455 0.00 0.00 44.76 3.55
3596 5085 5.241949 ACTTTGGCTACTATCTAGTCGATGG 59.758 44.000 0.00 0.00 37.73 3.51
3597 5086 6.320494 ACTTTGGCTACTATCTAGTCGATG 57.680 41.667 0.00 0.00 37.73 3.84
3598 5087 6.321690 ACAACTTTGGCTACTATCTAGTCGAT 59.678 38.462 0.00 0.00 37.73 3.59
3599 5088 5.651139 ACAACTTTGGCTACTATCTAGTCGA 59.349 40.000 0.00 0.00 37.73 4.20
3600 5089 5.892568 ACAACTTTGGCTACTATCTAGTCG 58.107 41.667 0.00 0.00 37.73 4.18
3601 5090 7.998580 AGTACAACTTTGGCTACTATCTAGTC 58.001 38.462 0.00 0.00 37.73 2.59
3602 5091 7.614583 TGAGTACAACTTTGGCTACTATCTAGT 59.385 37.037 0.00 0.00 40.24 2.57
3603 5092 7.997482 TGAGTACAACTTTGGCTACTATCTAG 58.003 38.462 0.00 0.00 0.00 2.43
3604 5093 7.949690 TGAGTACAACTTTGGCTACTATCTA 57.050 36.000 0.00 0.00 0.00 1.98
3605 5094 6.852420 TGAGTACAACTTTGGCTACTATCT 57.148 37.500 0.00 0.00 0.00 1.98
3606 5095 7.042335 ACATGAGTACAACTTTGGCTACTATC 58.958 38.462 0.00 0.00 0.00 2.08
3607 5096 6.947464 ACATGAGTACAACTTTGGCTACTAT 58.053 36.000 0.00 0.00 0.00 2.12
3608 5097 6.354794 ACATGAGTACAACTTTGGCTACTA 57.645 37.500 0.00 0.00 0.00 1.82
3609 5098 5.228945 ACATGAGTACAACTTTGGCTACT 57.771 39.130 0.00 0.00 0.00 2.57
3610 5099 4.392138 GGACATGAGTACAACTTTGGCTAC 59.608 45.833 0.00 0.00 0.00 3.58
3611 5100 4.041075 TGGACATGAGTACAACTTTGGCTA 59.959 41.667 0.00 0.00 35.05 3.93
3612 5101 3.181445 TGGACATGAGTACAACTTTGGCT 60.181 43.478 0.00 0.00 35.05 4.75
3613 5102 3.146066 TGGACATGAGTACAACTTTGGC 58.854 45.455 0.00 0.00 35.05 4.52
3614 5103 5.473162 TCAATGGACATGAGTACAACTTTGG 59.527 40.000 0.00 0.00 43.15 3.28
3615 5104 6.373779 GTCAATGGACATGAGTACAACTTTG 58.626 40.000 0.00 0.00 43.15 2.77
3616 5105 6.560253 GTCAATGGACATGAGTACAACTTT 57.440 37.500 0.00 0.00 43.15 2.66
3630 5119 4.137116 TGCCACTATACTGTCAATGGAC 57.863 45.455 0.00 0.00 44.57 4.02
3631 5120 4.384098 CCTTGCCACTATACTGTCAATGGA 60.384 45.833 4.92 0.00 0.00 3.41
3632 5121 3.879295 CCTTGCCACTATACTGTCAATGG 59.121 47.826 0.00 0.00 0.00 3.16
3633 5122 4.769688 TCCTTGCCACTATACTGTCAATG 58.230 43.478 0.00 0.00 0.00 2.82
3634 5123 4.141620 CCTCCTTGCCACTATACTGTCAAT 60.142 45.833 0.00 0.00 0.00 2.57
3635 5124 3.197766 CCTCCTTGCCACTATACTGTCAA 59.802 47.826 0.00 0.00 0.00 3.18
3636 5125 2.766263 CCTCCTTGCCACTATACTGTCA 59.234 50.000 0.00 0.00 0.00 3.58
3637 5126 3.031736 TCCTCCTTGCCACTATACTGTC 58.968 50.000 0.00 0.00 0.00 3.51
3638 5127 3.034635 CTCCTCCTTGCCACTATACTGT 58.965 50.000 0.00 0.00 0.00 3.55
3639 5128 2.224161 GCTCCTCCTTGCCACTATACTG 60.224 54.545 0.00 0.00 0.00 2.74
3640 5129 2.043227 GCTCCTCCTTGCCACTATACT 58.957 52.381 0.00 0.00 0.00 2.12
3641 5130 2.043227 AGCTCCTCCTTGCCACTATAC 58.957 52.381 0.00 0.00 0.00 1.47
3642 5131 2.478872 AGCTCCTCCTTGCCACTATA 57.521 50.000 0.00 0.00 0.00 1.31
3643 5132 1.589414 AAGCTCCTCCTTGCCACTAT 58.411 50.000 0.00 0.00 0.00 2.12
3644 5133 1.362224 AAAGCTCCTCCTTGCCACTA 58.638 50.000 0.00 0.00 0.00 2.74
3645 5134 0.480252 AAAAGCTCCTCCTTGCCACT 59.520 50.000 0.00 0.00 0.00 4.00
3646 5135 0.884514 GAAAAGCTCCTCCTTGCCAC 59.115 55.000 0.00 0.00 0.00 5.01
3647 5136 0.251341 GGAAAAGCTCCTCCTTGCCA 60.251 55.000 6.77 0.00 41.61 4.92
3648 5137 2.572733 GGAAAAGCTCCTCCTTGCC 58.427 57.895 6.77 0.00 41.61 4.52
3656 5145 2.155279 GGTGACTGAAGGAAAAGCTCC 58.845 52.381 0.00 0.00 45.81 4.70
3657 5146 3.133141 AGGTGACTGAAGGAAAAGCTC 57.867 47.619 0.00 0.00 41.13 4.09
3658 5147 3.481453 GAAGGTGACTGAAGGAAAAGCT 58.519 45.455 0.00 0.00 42.68 3.74
3659 5148 2.224314 CGAAGGTGACTGAAGGAAAAGC 59.776 50.000 0.00 0.00 42.68 3.51
3660 5149 2.224314 GCGAAGGTGACTGAAGGAAAAG 59.776 50.000 0.00 0.00 42.68 2.27
3661 5150 2.218603 GCGAAGGTGACTGAAGGAAAA 58.781 47.619 0.00 0.00 42.68 2.29
3662 5151 1.140052 TGCGAAGGTGACTGAAGGAAA 59.860 47.619 0.00 0.00 42.68 3.13
3663 5152 0.756294 TGCGAAGGTGACTGAAGGAA 59.244 50.000 0.00 0.00 42.68 3.36
3664 5153 0.756294 TTGCGAAGGTGACTGAAGGA 59.244 50.000 0.00 0.00 42.68 3.36
3665 5154 1.264288 GTTTGCGAAGGTGACTGAAGG 59.736 52.381 0.00 0.00 42.68 3.46
3666 5155 1.939934 TGTTTGCGAAGGTGACTGAAG 59.060 47.619 0.00 0.00 42.68 3.02
3667 5156 2.031258 TGTTTGCGAAGGTGACTGAA 57.969 45.000 0.00 0.00 42.68 3.02
3668 5157 1.668751 GTTGTTTGCGAAGGTGACTGA 59.331 47.619 0.00 0.00 42.68 3.41
3669 5158 1.594518 CGTTGTTTGCGAAGGTGACTG 60.595 52.381 0.00 0.00 42.68 3.51
3671 5160 0.316689 CCGTTGTTTGCGAAGGTGAC 60.317 55.000 0.00 0.00 0.00 3.67
3672 5161 0.745128 ACCGTTGTTTGCGAAGGTGA 60.745 50.000 0.00 0.00 39.03 4.02
3673 5162 0.591236 CACCGTTGTTTGCGAAGGTG 60.591 55.000 8.10 8.10 46.74 4.00
3674 5163 0.745128 TCACCGTTGTTTGCGAAGGT 60.745 50.000 0.00 0.00 40.76 3.50
3675 5164 0.591170 ATCACCGTTGTTTGCGAAGG 59.409 50.000 0.00 0.00 34.35 3.46
3676 5165 2.043411 CAATCACCGTTGTTTGCGAAG 58.957 47.619 0.00 0.00 0.00 3.79
3677 5166 1.402259 ACAATCACCGTTGTTTGCGAA 59.598 42.857 3.91 0.00 39.15 4.70
3678 5167 1.018148 ACAATCACCGTTGTTTGCGA 58.982 45.000 3.91 0.00 39.15 5.10
3679 5168 1.516453 CAACAATCACCGTTGTTTGCG 59.484 47.619 3.91 0.00 46.96 4.85
3680 5169 1.257675 GCAACAATCACCGTTGTTTGC 59.742 47.619 3.91 6.05 46.96 3.68
3681 5170 1.516453 CGCAACAATCACCGTTGTTTG 59.484 47.619 2.57 2.57 46.96 2.93
3682 5171 1.535015 CCGCAACAATCACCGTTGTTT 60.535 47.619 2.53 0.00 46.96 2.83
3684 5173 1.652012 CCGCAACAATCACCGTTGT 59.348 52.632 5.08 0.00 44.49 3.32
3685 5174 1.729131 GCCGCAACAATCACCGTTG 60.729 57.895 0.00 0.00 45.25 4.10
3686 5175 2.190170 TGCCGCAACAATCACCGTT 61.190 52.632 0.00 0.00 0.00 4.44
3687 5176 2.593148 TGCCGCAACAATCACCGT 60.593 55.556 0.00 0.00 0.00 4.83
3688 5177 2.126888 GTGCCGCAACAATCACCG 60.127 61.111 0.00 0.00 0.00 4.94
3689 5178 0.038343 AATGTGCCGCAACAATCACC 60.038 50.000 0.00 0.00 32.81 4.02
3690 5179 2.627863 TAATGTGCCGCAACAATCAC 57.372 45.000 0.00 0.00 32.81 3.06
3691 5180 3.056962 ACATTAATGTGCCGCAACAATCA 60.057 39.130 20.19 0.00 40.03 2.57
3692 5181 3.510719 ACATTAATGTGCCGCAACAATC 58.489 40.909 20.19 0.00 40.03 2.67
3693 5182 3.056962 TGACATTAATGTGCCGCAACAAT 60.057 39.130 25.42 0.00 41.95 2.71
3694 5183 2.294512 TGACATTAATGTGCCGCAACAA 59.705 40.909 25.42 0.00 41.95 2.83
3695 5184 1.882623 TGACATTAATGTGCCGCAACA 59.117 42.857 25.42 12.13 41.95 3.33
3696 5185 2.627863 TGACATTAATGTGCCGCAAC 57.372 45.000 25.42 9.69 41.95 4.17
3697 5186 3.056962 ACAATGACATTAATGTGCCGCAA 60.057 39.130 25.42 4.77 41.95 4.85
3698 5187 2.491298 ACAATGACATTAATGTGCCGCA 59.509 40.909 25.42 16.52 41.95 5.69
3699 5188 2.853594 CACAATGACATTAATGTGCCGC 59.146 45.455 25.42 11.44 41.95 6.53
3700 5189 4.345288 CTCACAATGACATTAATGTGCCG 58.655 43.478 25.42 12.80 41.95 5.69
3701 5190 4.675510 CCTCACAATGACATTAATGTGCC 58.324 43.478 25.42 12.49 41.95 5.01
3702 5191 4.107622 GCCTCACAATGACATTAATGTGC 58.892 43.478 25.42 14.60 41.95 4.57
3703 5192 4.440525 GGGCCTCACAATGACATTAATGTG 60.441 45.833 25.42 13.24 41.95 3.21
3704 5193 3.701040 GGGCCTCACAATGACATTAATGT 59.299 43.478 20.93 20.93 45.16 2.71
3705 5194 3.243168 CGGGCCTCACAATGACATTAATG 60.243 47.826 14.01 14.01 0.00 1.90
3706 5195 2.951642 CGGGCCTCACAATGACATTAAT 59.048 45.455 0.84 0.00 0.00 1.40
3707 5196 2.364632 CGGGCCTCACAATGACATTAA 58.635 47.619 0.84 0.00 0.00 1.40
3708 5197 1.408127 CCGGGCCTCACAATGACATTA 60.408 52.381 0.84 0.00 0.00 1.90
3709 5198 0.680921 CCGGGCCTCACAATGACATT 60.681 55.000 0.84 0.00 0.00 2.71
3710 5199 1.077501 CCGGGCCTCACAATGACAT 60.078 57.895 0.84 0.00 0.00 3.06
3711 5200 2.220586 TCCGGGCCTCACAATGACA 61.221 57.895 0.84 0.00 0.00 3.58
3712 5201 1.745489 GTCCGGGCCTCACAATGAC 60.745 63.158 0.84 0.00 0.00 3.06
3713 5202 1.561769 ATGTCCGGGCCTCACAATGA 61.562 55.000 2.12 0.00 0.00 2.57
3714 5203 1.077501 ATGTCCGGGCCTCACAATG 60.078 57.895 2.12 0.00 0.00 2.82
3715 5204 1.077501 CATGTCCGGGCCTCACAAT 60.078 57.895 2.12 0.00 0.00 2.71
3716 5205 2.350895 CATGTCCGGGCCTCACAA 59.649 61.111 2.12 0.00 0.00 3.33
3717 5206 4.408821 GCATGTCCGGGCCTCACA 62.409 66.667 2.12 4.19 0.00 3.58
3718 5207 2.252072 TTAGCATGTCCGGGCCTCAC 62.252 60.000 2.12 0.00 0.00 3.51
3719 5208 1.558167 TTTAGCATGTCCGGGCCTCA 61.558 55.000 2.12 0.00 0.00 3.86
3720 5209 0.815615 CTTTAGCATGTCCGGGCCTC 60.816 60.000 2.12 0.00 0.00 4.70
3721 5210 1.224592 CTTTAGCATGTCCGGGCCT 59.775 57.895 2.12 0.00 0.00 5.19
3722 5211 0.393808 TTCTTTAGCATGTCCGGGCC 60.394 55.000 2.12 0.00 0.00 5.80
3723 5212 1.401905 CTTTCTTTAGCATGTCCGGGC 59.598 52.381 0.00 0.00 0.00 6.13
3724 5213 1.401905 GCTTTCTTTAGCATGTCCGGG 59.598 52.381 0.00 0.00 40.89 5.73
3725 5214 2.083774 TGCTTTCTTTAGCATGTCCGG 58.916 47.619 0.00 0.00 45.72 5.14
3733 5222 4.142315 TGGATCTTGCATGCTTTCTTTAGC 60.142 41.667 20.33 0.15 41.59 3.09
3734 5223 5.571784 TGGATCTTGCATGCTTTCTTTAG 57.428 39.130 20.33 5.03 0.00 1.85
3735 5224 5.981088 TTGGATCTTGCATGCTTTCTTTA 57.019 34.783 20.33 0.00 0.00 1.85
3736 5225 4.877378 TTGGATCTTGCATGCTTTCTTT 57.123 36.364 20.33 0.00 0.00 2.52
3737 5226 4.525487 TCTTTGGATCTTGCATGCTTTCTT 59.475 37.500 20.33 0.00 0.00 2.52
3738 5227 4.084287 TCTTTGGATCTTGCATGCTTTCT 58.916 39.130 20.33 0.85 0.00 2.52
3739 5228 4.445452 TCTTTGGATCTTGCATGCTTTC 57.555 40.909 20.33 9.86 0.00 2.62
3740 5229 4.464951 TGATCTTTGGATCTTGCATGCTTT 59.535 37.500 20.33 0.26 46.18 3.51
3741 5230 4.021229 TGATCTTTGGATCTTGCATGCTT 58.979 39.130 20.33 0.66 46.18 3.91
3742 5231 3.628008 TGATCTTTGGATCTTGCATGCT 58.372 40.909 20.33 0.00 46.18 3.79
3743 5232 4.299155 CATGATCTTTGGATCTTGCATGC 58.701 43.478 11.82 11.82 46.18 4.06
3749 5238 5.198207 TGCATCACATGATCTTTGGATCTT 58.802 37.500 0.00 0.00 46.18 2.40
3750 5239 4.788679 TGCATCACATGATCTTTGGATCT 58.211 39.130 0.00 0.00 46.18 2.75
3751 5240 5.067413 AGTTGCATCACATGATCTTTGGATC 59.933 40.000 0.00 0.00 46.20 3.36
3752 5241 4.954202 AGTTGCATCACATGATCTTTGGAT 59.046 37.500 0.00 0.00 31.21 3.41
3753 5242 4.338012 AGTTGCATCACATGATCTTTGGA 58.662 39.130 0.00 0.00 31.21 3.53
3754 5243 4.713824 AGTTGCATCACATGATCTTTGG 57.286 40.909 0.00 0.00 31.21 3.28
3755 5244 5.466819 ACAAGTTGCATCACATGATCTTTG 58.533 37.500 1.81 0.00 31.21 2.77
3756 5245 5.717078 ACAAGTTGCATCACATGATCTTT 57.283 34.783 1.81 0.00 31.21 2.52
3757 5246 5.242171 TGAACAAGTTGCATCACATGATCTT 59.758 36.000 1.81 0.00 31.21 2.40
3758 5247 4.763279 TGAACAAGTTGCATCACATGATCT 59.237 37.500 1.81 0.00 31.21 2.75
3759 5248 4.855388 GTGAACAAGTTGCATCACATGATC 59.145 41.667 25.85 4.51 37.42 2.92
3760 5249 4.614306 CGTGAACAAGTTGCATCACATGAT 60.614 41.667 28.04 0.00 37.36 2.45
3761 5250 3.303924 CGTGAACAAGTTGCATCACATGA 60.304 43.478 28.04 3.75 37.36 3.07
3762 5251 2.975193 CGTGAACAAGTTGCATCACATG 59.025 45.455 28.04 16.70 37.36 3.21
3763 5252 2.877786 TCGTGAACAAGTTGCATCACAT 59.122 40.909 28.04 0.00 37.36 3.21
3764 5253 2.284190 TCGTGAACAAGTTGCATCACA 58.716 42.857 28.04 18.42 37.36 3.58
3765 5254 3.332761 TTCGTGAACAAGTTGCATCAC 57.667 42.857 23.01 23.01 35.46 3.06
3766 5255 3.563390 TCATTCGTGAACAAGTTGCATCA 59.437 39.130 1.81 5.32 0.00 3.07
3767 5256 4.145876 TCATTCGTGAACAAGTTGCATC 57.854 40.909 1.81 2.52 0.00 3.91
3768 5257 4.216042 TCATCATTCGTGAACAAGTTGCAT 59.784 37.500 1.81 0.00 0.00 3.96
3769 5258 3.563390 TCATCATTCGTGAACAAGTTGCA 59.437 39.130 1.81 0.00 0.00 4.08
3770 5259 4.145876 TCATCATTCGTGAACAAGTTGC 57.854 40.909 1.81 0.00 0.00 4.17
3771 5260 5.090757 CCATCATCATTCGTGAACAAGTTG 58.909 41.667 0.00 0.00 0.00 3.16
3772 5261 4.761739 ACCATCATCATTCGTGAACAAGTT 59.238 37.500 0.00 0.00 0.00 2.66
3773 5262 4.326826 ACCATCATCATTCGTGAACAAGT 58.673 39.130 0.00 0.00 0.00 3.16
3774 5263 4.633126 AGACCATCATCATTCGTGAACAAG 59.367 41.667 0.00 0.00 0.00 3.16
3775 5264 4.578871 AGACCATCATCATTCGTGAACAA 58.421 39.130 0.00 0.00 0.00 2.83
3776 5265 4.206477 AGACCATCATCATTCGTGAACA 57.794 40.909 0.00 0.00 0.00 3.18
3777 5266 4.872691 AGAAGACCATCATCATTCGTGAAC 59.127 41.667 0.00 0.00 0.00 3.18
3778 5267 5.089970 AGAAGACCATCATCATTCGTGAA 57.910 39.130 0.00 0.00 0.00 3.18
3779 5268 4.743057 AGAAGACCATCATCATTCGTGA 57.257 40.909 0.00 0.00 0.00 4.35
3780 5269 6.313658 TGTTAAGAAGACCATCATCATTCGTG 59.686 38.462 0.00 0.00 0.00 4.35
3781 5270 6.406370 TGTTAAGAAGACCATCATCATTCGT 58.594 36.000 0.00 0.00 0.00 3.85
3782 5271 6.908870 TGTTAAGAAGACCATCATCATTCG 57.091 37.500 0.00 0.00 0.00 3.34
3783 5272 8.341173 GTCATGTTAAGAAGACCATCATCATTC 58.659 37.037 0.00 0.00 0.00 2.67
3784 5273 8.218338 GTCATGTTAAGAAGACCATCATCATT 57.782 34.615 0.00 0.00 0.00 2.57
3785 5274 7.798596 GTCATGTTAAGAAGACCATCATCAT 57.201 36.000 0.00 0.00 0.00 2.45
3794 5283 7.254932 GCAATATCAGGGTCATGTTAAGAAGAC 60.255 40.741 0.00 0.00 0.00 3.01
3795 5284 6.767902 GCAATATCAGGGTCATGTTAAGAAGA 59.232 38.462 0.00 0.00 0.00 2.87
3796 5285 6.016777 GGCAATATCAGGGTCATGTTAAGAAG 60.017 42.308 0.00 0.00 0.00 2.85
3797 5286 5.827797 GGCAATATCAGGGTCATGTTAAGAA 59.172 40.000 0.00 0.00 0.00 2.52
3798 5287 5.376625 GGCAATATCAGGGTCATGTTAAGA 58.623 41.667 0.00 0.00 0.00 2.10
3799 5288 4.520492 GGGCAATATCAGGGTCATGTTAAG 59.480 45.833 0.00 0.00 0.00 1.85
3800 5289 4.167892 AGGGCAATATCAGGGTCATGTTAA 59.832 41.667 0.00 0.00 0.00 2.01
3801 5290 3.721575 AGGGCAATATCAGGGTCATGTTA 59.278 43.478 0.00 0.00 0.00 2.41
3802 5291 2.515429 AGGGCAATATCAGGGTCATGTT 59.485 45.455 0.00 0.00 0.00 2.71
3803 5292 2.138542 AGGGCAATATCAGGGTCATGT 58.861 47.619 0.00 0.00 0.00 3.21
3804 5293 2.889045 CAAGGGCAATATCAGGGTCATG 59.111 50.000 0.00 0.00 0.00 3.07
3805 5294 2.515429 ACAAGGGCAATATCAGGGTCAT 59.485 45.455 0.00 0.00 0.00 3.06
3806 5295 1.922447 ACAAGGGCAATATCAGGGTCA 59.078 47.619 0.00 0.00 0.00 4.02
3807 5296 2.736670 ACAAGGGCAATATCAGGGTC 57.263 50.000 0.00 0.00 0.00 4.46
3808 5297 4.536765 CTTTACAAGGGCAATATCAGGGT 58.463 43.478 0.00 0.00 0.00 4.34
3809 5298 3.319122 GCTTTACAAGGGCAATATCAGGG 59.681 47.826 0.00 0.00 0.00 4.45
3810 5299 3.319122 GGCTTTACAAGGGCAATATCAGG 59.681 47.826 0.00 0.00 0.00 3.86
3811 5300 4.210331 AGGCTTTACAAGGGCAATATCAG 58.790 43.478 0.63 0.00 0.00 2.90
3812 5301 4.249638 AGGCTTTACAAGGGCAATATCA 57.750 40.909 0.63 0.00 0.00 2.15
3813 5302 4.038042 GGAAGGCTTTACAAGGGCAATATC 59.962 45.833 0.00 0.00 0.00 1.63
3814 5303 3.960755 GGAAGGCTTTACAAGGGCAATAT 59.039 43.478 0.00 0.00 0.00 1.28
3815 5304 3.361786 GGAAGGCTTTACAAGGGCAATA 58.638 45.455 0.00 0.00 0.00 1.90
3816 5305 2.179427 GGAAGGCTTTACAAGGGCAAT 58.821 47.619 0.00 0.00 0.00 3.56
3817 5306 1.627864 GGAAGGCTTTACAAGGGCAA 58.372 50.000 0.00 0.00 0.00 4.52
3818 5307 0.608035 CGGAAGGCTTTACAAGGGCA 60.608 55.000 0.00 0.00 0.00 5.36
3819 5308 2.180674 CGGAAGGCTTTACAAGGGC 58.819 57.895 0.00 0.00 0.00 5.19
3839 5328 5.617609 CATGCATTGAAATTGCAAGAACTG 58.382 37.500 4.94 0.00 42.12 3.16
3840 5329 4.153475 GCATGCATTGAAATTGCAAGAACT 59.847 37.500 14.21 0.00 42.12 3.01
3841 5330 4.083749 TGCATGCATTGAAATTGCAAGAAC 60.084 37.500 18.46 0.00 42.12 3.01
3842 5331 4.065789 TGCATGCATTGAAATTGCAAGAA 58.934 34.783 18.46 0.00 42.12 2.52
3843 5332 3.665190 TGCATGCATTGAAATTGCAAGA 58.335 36.364 18.46 0.00 42.12 3.02
3844 5333 4.411993 TTGCATGCATTGAAATTGCAAG 57.588 36.364 23.37 0.00 45.42 4.01
3846 5335 4.003648 TGATTGCATGCATTGAAATTGCA 58.996 34.783 23.37 7.45 41.22 4.08
3847 5336 4.608073 TGATTGCATGCATTGAAATTGC 57.392 36.364 23.37 4.81 33.38 3.56
3848 5337 6.312672 TCTCTTGATTGCATGCATTGAAATTG 59.687 34.615 23.37 10.66 33.38 2.32
3849 5338 6.403049 TCTCTTGATTGCATGCATTGAAATT 58.597 32.000 23.37 0.43 33.38 1.82
3850 5339 5.972935 TCTCTTGATTGCATGCATTGAAAT 58.027 33.333 23.37 11.73 36.18 2.17
3851 5340 5.394224 TCTCTTGATTGCATGCATTGAAA 57.606 34.783 23.37 12.62 0.00 2.69
3852 5341 5.451381 GGATCTCTTGATTGCATGCATTGAA 60.451 40.000 23.37 17.10 32.19 2.69
3853 5342 4.037565 GGATCTCTTGATTGCATGCATTGA 59.962 41.667 23.37 9.70 32.19 2.57
3854 5343 4.202111 TGGATCTCTTGATTGCATGCATTG 60.202 41.667 23.37 10.06 32.19 2.82
3855 5344 3.958147 TGGATCTCTTGATTGCATGCATT 59.042 39.130 23.37 18.66 32.19 3.56
3856 5345 3.562182 TGGATCTCTTGATTGCATGCAT 58.438 40.909 23.37 11.80 32.19 3.96
3857 5346 3.007473 TGGATCTCTTGATTGCATGCA 57.993 42.857 18.46 18.46 32.19 3.96
3858 5347 3.795826 GCTTGGATCTCTTGATTGCATGC 60.796 47.826 11.82 11.82 32.19 4.06
3859 5348 3.380320 TGCTTGGATCTCTTGATTGCATG 59.620 43.478 0.00 0.00 32.19 4.06
3860 5349 3.628008 TGCTTGGATCTCTTGATTGCAT 58.372 40.909 0.00 0.00 32.19 3.96
3861 5350 3.076079 TGCTTGGATCTCTTGATTGCA 57.924 42.857 0.00 0.00 32.19 4.08
3862 5351 4.082354 AGTTTGCTTGGATCTCTTGATTGC 60.082 41.667 0.00 0.00 32.19 3.56
3863 5352 5.640189 AGTTTGCTTGGATCTCTTGATTG 57.360 39.130 0.00 0.00 32.19 2.67
3864 5353 6.022163 CAAGTTTGCTTGGATCTCTTGATT 57.978 37.500 0.00 0.00 46.17 2.57
3865 5354 5.640189 CAAGTTTGCTTGGATCTCTTGAT 57.360 39.130 0.00 0.00 46.17 2.57
3877 5366 1.075301 AGGGTGGCCAAGTTTGCTT 60.075 52.632 7.24 0.00 34.82 3.91
3878 5367 1.531602 GAGGGTGGCCAAGTTTGCT 60.532 57.895 7.24 0.00 0.00 3.91
3879 5368 1.115326 AAGAGGGTGGCCAAGTTTGC 61.115 55.000 7.24 0.00 0.00 3.68
3880 5369 1.886542 GTAAGAGGGTGGCCAAGTTTG 59.113 52.381 7.24 0.00 0.00 2.93
3881 5370 1.780919 AGTAAGAGGGTGGCCAAGTTT 59.219 47.619 7.24 0.29 0.00 2.66
3882 5371 1.446016 AGTAAGAGGGTGGCCAAGTT 58.554 50.000 7.24 0.00 0.00 2.66
3883 5372 1.446016 AAGTAAGAGGGTGGCCAAGT 58.554 50.000 7.24 0.00 0.00 3.16
3884 5373 3.199946 TCATAAGTAAGAGGGTGGCCAAG 59.800 47.826 7.24 0.00 0.00 3.61
3885 5374 3.186283 TCATAAGTAAGAGGGTGGCCAA 58.814 45.455 7.24 0.00 0.00 4.52
3886 5375 2.771943 CTCATAAGTAAGAGGGTGGCCA 59.228 50.000 0.00 0.00 0.00 5.36
3887 5376 3.039011 TCTCATAAGTAAGAGGGTGGCC 58.961 50.000 0.00 0.00 32.76 5.36
3888 5377 4.965200 ATCTCATAAGTAAGAGGGTGGC 57.035 45.455 0.00 0.00 32.76 5.01
3889 5378 5.059833 GCAATCTCATAAGTAAGAGGGTGG 58.940 45.833 0.00 0.00 32.76 4.61
3890 5379 5.059833 GGCAATCTCATAAGTAAGAGGGTG 58.940 45.833 0.00 0.00 32.76 4.61
3891 5380 4.721776 TGGCAATCTCATAAGTAAGAGGGT 59.278 41.667 0.00 0.00 32.76 4.34
3892 5381 5.296151 TGGCAATCTCATAAGTAAGAGGG 57.704 43.478 0.00 0.00 32.76 4.30
3893 5382 6.586344 TCTTGGCAATCTCATAAGTAAGAGG 58.414 40.000 0.00 0.00 32.76 3.69
3894 5383 6.202570 GCTCTTGGCAATCTCATAAGTAAGAG 59.797 42.308 0.00 0.00 40.73 2.85
3895 5384 6.051717 GCTCTTGGCAATCTCATAAGTAAGA 58.948 40.000 0.00 0.00 41.35 2.10
3896 5385 5.238214 GGCTCTTGGCAATCTCATAAGTAAG 59.762 44.000 0.00 0.00 44.01 2.34
3897 5386 5.104360 AGGCTCTTGGCAATCTCATAAGTAA 60.104 40.000 0.00 0.00 44.01 2.24
3898 5387 4.410228 AGGCTCTTGGCAATCTCATAAGTA 59.590 41.667 0.00 0.00 44.01 2.24
3899 5388 3.201708 AGGCTCTTGGCAATCTCATAAGT 59.798 43.478 0.00 0.00 44.01 2.24
3900 5389 3.814283 GAGGCTCTTGGCAATCTCATAAG 59.186 47.826 7.40 0.00 44.01 1.73
3901 5390 3.457380 AGAGGCTCTTGGCAATCTCATAA 59.543 43.478 12.24 0.00 44.01 1.90
3902 5391 3.044156 AGAGGCTCTTGGCAATCTCATA 58.956 45.455 12.24 0.00 44.01 2.15
3903 5392 1.845143 AGAGGCTCTTGGCAATCTCAT 59.155 47.619 12.24 0.00 44.01 2.90
3904 5393 1.209019 GAGAGGCTCTTGGCAATCTCA 59.791 52.381 19.80 0.00 46.01 3.27
3905 5394 1.805871 CGAGAGGCTCTTGGCAATCTC 60.806 57.143 22.02 14.80 44.65 2.75
3906 5395 0.177604 CGAGAGGCTCTTGGCAATCT 59.822 55.000 22.02 0.00 44.01 2.40
3907 5396 2.687842 CGAGAGGCTCTTGGCAATC 58.312 57.895 22.02 5.79 44.01 2.67
3908 5397 4.950479 CGAGAGGCTCTTGGCAAT 57.050 55.556 22.02 0.00 44.01 3.56
3934 5423 2.918712 ACCTGAGAGAACCAACTGTG 57.081 50.000 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.