Multiple sequence alignment - TraesCS5B01G519000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G519000 chr5B 100.000 3198 0 0 1 3198 681817973 681814776 0.000000e+00 5906
1 TraesCS5B01G519000 chr5B 83.772 1596 171 47 685 2209 681780115 681778537 0.000000e+00 1432
2 TraesCS5B01G519000 chr5B 82.025 395 46 18 147 519 429636893 429636502 2.400000e-81 313
3 TraesCS5B01G519000 chr5B 86.190 210 21 3 132 338 232292951 232292747 1.490000e-53 220
4 TraesCS5B01G519000 chr5D 95.432 2255 74 11 685 2913 539814656 539812405 0.000000e+00 3567
5 TraesCS5B01G519000 chr5D 85.021 1442 147 32 685 2061 539786451 539785014 0.000000e+00 1402
6 TraesCS5B01G519000 chr5D 96.491 114 4 0 3085 3198 247603468 247603355 4.210000e-44 189
7 TraesCS5B01G519000 chr4A 95.650 1770 57 10 518 2268 628622341 628624109 0.000000e+00 2824
8 TraesCS5B01G519000 chr4A 83.488 1405 160 30 854 2209 628635507 628636888 0.000000e+00 1243
9 TraesCS5B01G519000 chr4A 88.626 422 34 6 2318 2731 628624103 628624518 4.760000e-138 501
10 TraesCS5B01G519000 chr4A 86.589 343 34 7 2736 3078 628624555 628624885 5.040000e-98 368
11 TraesCS5B01G519000 chr4A 81.776 214 32 6 682 890 628635295 628635506 4.240000e-39 172
12 TraesCS5B01G519000 chr7A 95.402 174 5 3 345 515 36366118 36365945 1.130000e-69 274
13 TraesCS5B01G519000 chr3D 94.318 176 6 4 344 517 146133614 146133787 1.890000e-67 267
14 TraesCS5B01G519000 chr1B 94.286 175 8 2 345 517 626698076 626697902 1.890000e-67 267
15 TraesCS5B01G519000 chr1B 88.776 196 15 2 148 340 681723971 681723780 1.920000e-57 233
16 TraesCS5B01G519000 chr1D 94.706 170 8 1 350 518 345443395 345443564 2.450000e-66 263
17 TraesCS5B01G519000 chr7D 93.750 176 8 3 345 517 638624008 638623833 8.800000e-66 261
18 TraesCS5B01G519000 chr7D 89.175 194 12 4 148 338 406269999 406270186 1.920000e-57 233
19 TraesCS5B01G519000 chr7D 88.601 193 14 3 154 343 574916563 574916376 8.920000e-56 228
20 TraesCS5B01G519000 chr4D 93.714 175 9 2 345 517 28782158 28781984 8.800000e-66 261
21 TraesCS5B01G519000 chr2B 93.714 175 9 2 345 517 680064249 680064075 8.800000e-66 261
22 TraesCS5B01G519000 chr2B 98.246 114 2 0 3085 3198 367594773 367594886 1.950000e-47 200
23 TraesCS5B01G519000 chr7B 93.182 176 9 3 345 517 517332911 517333086 4.090000e-64 255
24 TraesCS5B01G519000 chr7B 88.889 198 15 3 146 340 686216328 686216135 1.480000e-58 237
25 TraesCS5B01G519000 chr3A 90.306 196 12 2 148 340 596695817 596696008 1.900000e-62 250
26 TraesCS5B01G519000 chr6D 90.306 196 10 3 148 340 392516925 392517114 6.850000e-62 248
27 TraesCS5B01G519000 chr6D 89.175 194 13 2 148 338 386472648 386472836 5.330000e-58 235
28 TraesCS5B01G519000 chr2D 88.718 195 14 3 145 336 422345546 422345735 6.900000e-57 231
29 TraesCS5B01G519000 chr4B 97.391 115 3 0 3084 3198 381058828 381058714 2.520000e-46 196
30 TraesCS5B01G519000 chr4B 96.552 116 3 1 3084 3198 388824423 388824308 1.170000e-44 191
31 TraesCS5B01G519000 chr4B 96.491 114 3 1 3085 3198 192578725 192578837 1.510000e-43 187
32 TraesCS5B01G519000 chr3B 97.368 114 3 0 3085 3198 19356707 19356594 9.050000e-46 195
33 TraesCS5B01G519000 chr3B 96.522 115 4 0 3084 3198 673216017 673216131 1.170000e-44 191
34 TraesCS5B01G519000 chr3B 96.491 114 4 0 3085 3198 221962144 221962031 4.210000e-44 189
35 TraesCS5B01G519000 chr6B 96.491 114 4 0 3085 3198 56881087 56880974 4.210000e-44 189
36 TraesCS5B01G519000 chrUn 83.036 112 16 2 1 110 37078203 37078313 7.300000e-17 99


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G519000 chr5B 681814776 681817973 3197 True 5906.0 5906 100.000000 1 3198 1 chr5B.!!$R4 3197
1 TraesCS5B01G519000 chr5B 681778537 681780115 1578 True 1432.0 1432 83.772000 685 2209 1 chr5B.!!$R3 1524
2 TraesCS5B01G519000 chr5D 539812405 539814656 2251 True 3567.0 3567 95.432000 685 2913 1 chr5D.!!$R3 2228
3 TraesCS5B01G519000 chr5D 539785014 539786451 1437 True 1402.0 1402 85.021000 685 2061 1 chr5D.!!$R2 1376
4 TraesCS5B01G519000 chr4A 628622341 628624885 2544 False 1231.0 2824 90.288333 518 3078 3 chr4A.!!$F1 2560
5 TraesCS5B01G519000 chr4A 628635295 628636888 1593 False 707.5 1243 82.632000 682 2209 2 chr4A.!!$F2 1527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
189 190 0.105504 GCTCCATGGGGGCCTTTATT 60.106 55.0 15.13 0.0 36.21 1.40 F
354 355 0.182299 GGCCTAGAGCAGCCTCATTT 59.818 55.0 0.00 0.0 46.14 2.32 F
1658 1737 0.392193 CTGAGCTTCCATGGCTTCGT 60.392 55.0 6.96 0.0 40.40 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1839 1927 0.041684 TCTCCTCCTCATCCAGCACA 59.958 55.0 0.00 0.0 0.0 4.57 R
2184 2308 1.661341 GACATGTCATGAGAGCCACC 58.339 55.0 21.07 0.0 0.0 4.61 R
3115 3280 0.105142 TGCCTCTCCATACCTACCCC 60.105 60.0 0.00 0.0 0.0 4.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.753319 TGGGCTGCTGTGTAGTACA 58.247 52.632 0.00 0.00 37.78 2.90
19 20 1.275666 TGGGCTGCTGTGTAGTACAT 58.724 50.000 6.21 0.00 38.92 2.29
20 21 1.066215 TGGGCTGCTGTGTAGTACATG 60.066 52.381 6.21 4.25 38.92 3.21
21 22 1.009829 GGCTGCTGTGTAGTACATGC 58.990 55.000 18.45 18.45 38.92 4.06
22 23 1.675714 GGCTGCTGTGTAGTACATGCA 60.676 52.381 23.30 23.30 39.45 3.96
23 24 2.076100 GCTGCTGTGTAGTACATGCAA 58.924 47.619 24.21 14.14 40.41 4.08
24 25 2.483877 GCTGCTGTGTAGTACATGCAAA 59.516 45.455 24.21 10.90 40.41 3.68
25 26 3.058293 GCTGCTGTGTAGTACATGCAAAA 60.058 43.478 24.21 10.41 40.41 2.44
26 27 4.556501 GCTGCTGTGTAGTACATGCAAAAA 60.557 41.667 24.21 10.16 40.41 1.94
27 28 5.702865 CTGCTGTGTAGTACATGCAAAAAT 58.297 37.500 24.21 0.00 40.41 1.82
28 29 5.459768 TGCTGTGTAGTACATGCAAAAATG 58.540 37.500 22.90 3.32 39.09 2.32
29 30 4.324402 GCTGTGTAGTACATGCAAAAATGC 59.676 41.667 19.64 6.42 38.92 3.56
30 31 5.702865 CTGTGTAGTACATGCAAAAATGCT 58.297 37.500 6.21 0.00 38.92 3.79
31 32 6.622679 GCTGTGTAGTACATGCAAAAATGCTA 60.623 38.462 19.64 0.00 38.92 3.49
32 33 6.607689 TGTGTAGTACATGCAAAAATGCTAC 58.392 36.000 6.21 0.91 33.42 3.58
33 34 6.205658 TGTGTAGTACATGCAAAAATGCTACA 59.794 34.615 6.21 13.13 33.98 2.74
34 35 7.081349 GTGTAGTACATGCAAAAATGCTACAA 58.919 34.615 16.55 5.17 36.12 2.41
35 36 7.060633 GTGTAGTACATGCAAAAATGCTACAAC 59.939 37.037 16.55 10.64 36.12 3.32
36 37 5.153513 AGTACATGCAAAAATGCTACAACG 58.846 37.500 0.00 0.00 35.49 4.10
37 38 3.976169 ACATGCAAAAATGCTACAACGT 58.024 36.364 0.00 0.00 35.49 3.99
38 39 4.367450 ACATGCAAAAATGCTACAACGTT 58.633 34.783 0.00 0.00 35.49 3.99
39 40 5.524284 ACATGCAAAAATGCTACAACGTTA 58.476 33.333 0.00 0.00 35.49 3.18
40 41 6.155827 ACATGCAAAAATGCTACAACGTTAT 58.844 32.000 0.00 0.00 35.49 1.89
41 42 6.644592 ACATGCAAAAATGCTACAACGTTATT 59.355 30.769 0.00 0.00 35.49 1.40
42 43 7.170658 ACATGCAAAAATGCTACAACGTTATTT 59.829 29.630 0.00 0.00 35.49 1.40
43 44 7.470289 TGCAAAAATGCTACAACGTTATTTT 57.530 28.000 11.21 11.21 33.71 1.82
44 45 7.340699 TGCAAAAATGCTACAACGTTATTTTG 58.659 30.769 15.71 15.60 38.73 2.44
45 46 7.010552 TGCAAAAATGCTACAACGTTATTTTGT 59.989 29.630 15.71 7.16 40.34 2.83
46 47 7.848539 GCAAAAATGCTACAACGTTATTTTGTT 59.151 29.630 15.71 3.27 38.21 2.83
47 48 9.695884 CAAAAATGCTACAACGTTATTTTGTTT 57.304 25.926 15.71 5.97 38.21 2.83
50 51 7.790861 ATGCTACAACGTTATTTTGTTTAGC 57.209 32.000 0.00 2.85 38.21 3.09
51 52 6.726230 TGCTACAACGTTATTTTGTTTAGCA 58.274 32.000 0.00 5.60 39.48 3.49
52 53 7.364200 TGCTACAACGTTATTTTGTTTAGCAT 58.636 30.769 0.00 0.00 38.38 3.79
53 54 7.535940 TGCTACAACGTTATTTTGTTTAGCATC 59.464 33.333 0.00 0.00 38.38 3.91
54 55 6.904954 ACAACGTTATTTTGTTTAGCATCG 57.095 33.333 0.00 0.00 33.23 3.84
55 56 5.854338 ACAACGTTATTTTGTTTAGCATCGG 59.146 36.000 0.00 0.00 33.23 4.18
56 57 5.866335 ACGTTATTTTGTTTAGCATCGGA 57.134 34.783 0.00 0.00 0.00 4.55
57 58 6.243811 ACGTTATTTTGTTTAGCATCGGAA 57.756 33.333 0.00 0.00 0.00 4.30
58 59 6.848451 ACGTTATTTTGTTTAGCATCGGAAT 58.152 32.000 0.00 0.00 0.00 3.01
59 60 7.976826 ACGTTATTTTGTTTAGCATCGGAATA 58.023 30.769 0.00 0.00 0.00 1.75
60 61 8.120465 ACGTTATTTTGTTTAGCATCGGAATAG 58.880 33.333 0.00 0.00 0.00 1.73
61 62 7.111593 CGTTATTTTGTTTAGCATCGGAATAGC 59.888 37.037 0.00 0.00 0.00 2.97
62 63 5.888691 TTTTGTTTAGCATCGGAATAGCA 57.111 34.783 3.82 0.00 0.00 3.49
63 64 4.875544 TTGTTTAGCATCGGAATAGCAC 57.124 40.909 3.82 0.00 0.00 4.40
64 65 2.863740 TGTTTAGCATCGGAATAGCACG 59.136 45.455 3.82 0.00 0.00 5.34
65 66 1.497991 TTAGCATCGGAATAGCACGC 58.502 50.000 3.82 0.00 0.00 5.34
66 67 0.673985 TAGCATCGGAATAGCACGCT 59.326 50.000 0.00 0.00 0.00 5.07
67 68 0.673985 AGCATCGGAATAGCACGCTA 59.326 50.000 0.39 0.39 0.00 4.26
68 69 1.273606 AGCATCGGAATAGCACGCTAT 59.726 47.619 5.72 5.72 40.63 2.97
69 70 2.492088 AGCATCGGAATAGCACGCTATA 59.508 45.455 11.80 0.00 38.20 1.31
70 71 3.056821 AGCATCGGAATAGCACGCTATAA 60.057 43.478 11.80 0.00 38.20 0.98
71 72 3.060895 GCATCGGAATAGCACGCTATAAC 59.939 47.826 11.80 9.15 38.20 1.89
72 73 3.994204 TCGGAATAGCACGCTATAACA 57.006 42.857 11.80 0.00 38.20 2.41
73 74 4.514781 TCGGAATAGCACGCTATAACAT 57.485 40.909 11.80 0.00 38.20 2.71
74 75 4.234574 TCGGAATAGCACGCTATAACATG 58.765 43.478 11.80 0.00 38.20 3.21
75 76 4.022676 TCGGAATAGCACGCTATAACATGA 60.023 41.667 11.80 8.39 38.20 3.07
76 77 4.684242 CGGAATAGCACGCTATAACATGAA 59.316 41.667 11.80 0.00 38.20 2.57
77 78 5.348724 CGGAATAGCACGCTATAACATGAAT 59.651 40.000 11.80 0.00 38.20 2.57
78 79 6.530181 CGGAATAGCACGCTATAACATGAATA 59.470 38.462 11.80 0.00 38.20 1.75
79 80 7.222805 CGGAATAGCACGCTATAACATGAATAT 59.777 37.037 11.80 0.17 38.20 1.28
80 81 8.543774 GGAATAGCACGCTATAACATGAATATC 58.456 37.037 11.80 2.50 38.20 1.63
81 82 9.087424 GAATAGCACGCTATAACATGAATATCA 57.913 33.333 11.80 0.00 38.20 2.15
82 83 6.957984 AGCACGCTATAACATGAATATCAG 57.042 37.500 0.00 0.00 0.00 2.90
83 84 5.349817 AGCACGCTATAACATGAATATCAGC 59.650 40.000 0.00 7.05 0.00 4.26
84 85 5.120674 GCACGCTATAACATGAATATCAGCA 59.879 40.000 0.00 0.00 0.00 4.41
85 86 6.671641 GCACGCTATAACATGAATATCAGCAG 60.672 42.308 0.00 7.12 0.00 4.24
86 87 5.349817 ACGCTATAACATGAATATCAGCAGC 59.650 40.000 0.00 3.22 0.00 5.25
87 88 5.499812 CGCTATAACATGAATATCAGCAGCG 60.500 44.000 16.17 16.17 40.60 5.18
88 89 5.578336 GCTATAACATGAATATCAGCAGCGA 59.422 40.000 0.00 0.00 0.00 4.93
89 90 6.237781 GCTATAACATGAATATCAGCAGCGAG 60.238 42.308 0.00 0.00 0.00 5.03
90 91 2.141517 ACATGAATATCAGCAGCGAGC 58.858 47.619 0.00 0.00 46.19 5.03
102 103 3.405170 GCAGCGAGCAAAATTAGCTAA 57.595 42.857 8.99 8.99 43.58 3.09
103 104 3.758300 GCAGCGAGCAAAATTAGCTAAA 58.242 40.909 10.85 0.00 43.58 1.85
104 105 4.165779 GCAGCGAGCAAAATTAGCTAAAA 58.834 39.130 10.85 0.00 43.58 1.52
105 106 4.030641 GCAGCGAGCAAAATTAGCTAAAAC 59.969 41.667 10.85 0.00 43.58 2.43
106 107 4.260656 CAGCGAGCAAAATTAGCTAAAACG 59.739 41.667 10.85 9.39 43.58 3.60
107 108 4.083484 AGCGAGCAAAATTAGCTAAAACGT 60.083 37.500 10.85 0.00 43.58 3.99
108 109 5.121142 AGCGAGCAAAATTAGCTAAAACGTA 59.879 36.000 10.85 0.00 43.58 3.57
109 110 5.791480 GCGAGCAAAATTAGCTAAAACGTAA 59.209 36.000 10.85 0.00 43.58 3.18
110 111 6.468000 GCGAGCAAAATTAGCTAAAACGTAAT 59.532 34.615 10.85 0.00 43.58 1.89
111 112 7.637132 GCGAGCAAAATTAGCTAAAACGTAATA 59.363 33.333 10.85 0.00 43.58 0.98
112 113 9.646336 CGAGCAAAATTAGCTAAAACGTAATAT 57.354 29.630 10.85 0.00 43.58 1.28
121 122 9.525409 TTAGCTAAAACGTAATATGACTCTTCC 57.475 33.333 2.97 0.00 0.00 3.46
122 123 7.553334 AGCTAAAACGTAATATGACTCTTCCA 58.447 34.615 0.00 0.00 0.00 3.53
123 124 7.707035 AGCTAAAACGTAATATGACTCTTCCAG 59.293 37.037 0.00 0.00 0.00 3.86
124 125 7.705325 GCTAAAACGTAATATGACTCTTCCAGA 59.295 37.037 0.00 0.00 0.00 3.86
125 126 7.829378 AAAACGTAATATGACTCTTCCAGAC 57.171 36.000 0.00 0.00 0.00 3.51
126 127 6.525578 AACGTAATATGACTCTTCCAGACA 57.474 37.500 0.00 0.00 0.00 3.41
127 128 5.892568 ACGTAATATGACTCTTCCAGACAC 58.107 41.667 0.00 0.00 28.99 3.67
128 129 4.970611 CGTAATATGACTCTTCCAGACACG 59.029 45.833 0.00 0.00 28.99 4.49
129 130 2.941453 TATGACTCTTCCAGACACGC 57.059 50.000 0.00 0.00 28.99 5.34
130 131 1.261480 ATGACTCTTCCAGACACGCT 58.739 50.000 0.00 0.00 28.99 5.07
131 132 1.905637 TGACTCTTCCAGACACGCTA 58.094 50.000 0.00 0.00 0.00 4.26
132 133 2.447443 TGACTCTTCCAGACACGCTAT 58.553 47.619 0.00 0.00 0.00 2.97
133 134 3.617284 TGACTCTTCCAGACACGCTATA 58.383 45.455 0.00 0.00 0.00 1.31
134 135 4.014406 TGACTCTTCCAGACACGCTATAA 58.986 43.478 0.00 0.00 0.00 0.98
135 136 4.142447 TGACTCTTCCAGACACGCTATAAC 60.142 45.833 0.00 0.00 0.00 1.89
136 137 3.762288 ACTCTTCCAGACACGCTATAACA 59.238 43.478 0.00 0.00 0.00 2.41
137 138 4.402793 ACTCTTCCAGACACGCTATAACAT 59.597 41.667 0.00 0.00 0.00 2.71
138 139 4.933330 TCTTCCAGACACGCTATAACATC 58.067 43.478 0.00 0.00 0.00 3.06
139 140 4.401202 TCTTCCAGACACGCTATAACATCA 59.599 41.667 0.00 0.00 0.00 3.07
140 141 4.729227 TCCAGACACGCTATAACATCAA 57.271 40.909 0.00 0.00 0.00 2.57
141 142 4.682787 TCCAGACACGCTATAACATCAAG 58.317 43.478 0.00 0.00 0.00 3.02
142 143 4.401202 TCCAGACACGCTATAACATCAAGA 59.599 41.667 0.00 0.00 0.00 3.02
143 144 5.069119 TCCAGACACGCTATAACATCAAGAT 59.931 40.000 0.00 0.00 0.00 2.40
144 145 6.264518 TCCAGACACGCTATAACATCAAGATA 59.735 38.462 0.00 0.00 0.00 1.98
145 146 6.923508 CCAGACACGCTATAACATCAAGATAA 59.076 38.462 0.00 0.00 0.00 1.75
146 147 7.096023 CCAGACACGCTATAACATCAAGATAAC 60.096 40.741 0.00 0.00 0.00 1.89
147 148 6.637254 AGACACGCTATAACATCAAGATAACG 59.363 38.462 0.00 0.00 0.00 3.18
148 149 6.500910 ACACGCTATAACATCAAGATAACGA 58.499 36.000 0.00 0.00 0.00 3.85
149 150 6.637254 ACACGCTATAACATCAAGATAACGAG 59.363 38.462 0.00 0.00 0.00 4.18
150 151 6.856426 CACGCTATAACATCAAGATAACGAGA 59.144 38.462 0.00 0.00 0.00 4.04
151 152 7.378728 CACGCTATAACATCAAGATAACGAGAA 59.621 37.037 0.00 0.00 0.00 2.87
152 153 7.919091 ACGCTATAACATCAAGATAACGAGAAA 59.081 33.333 0.00 0.00 0.00 2.52
153 154 8.420945 CGCTATAACATCAAGATAACGAGAAAG 58.579 37.037 0.00 0.00 0.00 2.62
154 155 8.704234 GCTATAACATCAAGATAACGAGAAAGG 58.296 37.037 0.00 0.00 0.00 3.11
155 156 5.803020 AACATCAAGATAACGAGAAAGGC 57.197 39.130 0.00 0.00 0.00 4.35
156 157 3.865745 ACATCAAGATAACGAGAAAGGCG 59.134 43.478 0.00 0.00 0.00 5.52
157 158 3.587797 TCAAGATAACGAGAAAGGCGT 57.412 42.857 0.00 0.00 44.94 5.68
163 164 3.390003 ACGAGAAAGGCGTTTTGGA 57.610 47.368 5.76 0.00 39.18 3.53
164 165 1.226746 ACGAGAAAGGCGTTTTGGAG 58.773 50.000 5.76 1.67 39.18 3.86
165 166 1.202604 ACGAGAAAGGCGTTTTGGAGA 60.203 47.619 5.76 0.00 39.18 3.71
166 167 1.194772 CGAGAAAGGCGTTTTGGAGAC 59.805 52.381 5.76 0.00 0.00 3.36
167 168 1.535896 GAGAAAGGCGTTTTGGAGACC 59.464 52.381 5.76 0.00 0.00 3.85
168 169 0.237498 GAAAGGCGTTTTGGAGACCG 59.763 55.000 5.76 0.00 0.00 4.79
169 170 1.170290 AAAGGCGTTTTGGAGACCGG 61.170 55.000 0.00 0.00 0.00 5.28
170 171 3.053896 GGCGTTTTGGAGACCGGG 61.054 66.667 6.32 0.00 0.00 5.73
171 172 3.733960 GCGTTTTGGAGACCGGGC 61.734 66.667 6.32 0.52 0.00 6.13
172 173 2.032071 CGTTTTGGAGACCGGGCT 59.968 61.111 11.50 11.50 0.00 5.19
173 174 2.033194 CGTTTTGGAGACCGGGCTC 61.033 63.158 30.53 30.53 0.00 4.70
179 180 3.866582 GAGACCGGGCTCCATGGG 61.867 72.222 28.29 3.69 0.00 4.00
186 187 4.079961 GGCTCCATGGGGGCCTTT 62.080 66.667 27.75 0.00 43.38 3.11
187 188 2.700185 GGCTCCATGGGGGCCTTTA 61.700 63.158 27.75 0.00 43.38 1.85
188 189 1.543690 GCTCCATGGGGGCCTTTAT 59.456 57.895 15.13 0.00 36.21 1.40
189 190 0.105504 GCTCCATGGGGGCCTTTATT 60.106 55.000 15.13 0.00 36.21 1.40
190 191 1.692441 GCTCCATGGGGGCCTTTATTT 60.692 52.381 15.13 0.00 36.21 1.40
191 192 2.763039 CTCCATGGGGGCCTTTATTTT 58.237 47.619 13.02 0.00 36.21 1.82
192 193 3.114606 CTCCATGGGGGCCTTTATTTTT 58.885 45.455 13.02 0.00 36.21 1.94
193 194 2.843113 TCCATGGGGGCCTTTATTTTTG 59.157 45.455 13.02 0.00 36.21 2.44
194 195 2.843113 CCATGGGGGCCTTTATTTTTGA 59.157 45.455 2.85 0.00 0.00 2.69
195 196 3.265479 CCATGGGGGCCTTTATTTTTGAA 59.735 43.478 2.85 0.00 0.00 2.69
196 197 4.263683 CCATGGGGGCCTTTATTTTTGAAA 60.264 41.667 2.85 0.00 0.00 2.69
197 198 5.320277 CATGGGGGCCTTTATTTTTGAAAA 58.680 37.500 0.84 0.00 0.00 2.29
198 199 5.388599 TGGGGGCCTTTATTTTTGAAAAA 57.611 34.783 5.47 5.47 0.00 1.94
264 265 9.903682 ATATACGTGTATGTAAGGATGTAACAC 57.096 33.333 3.79 0.00 34.00 3.32
265 266 6.028146 ACGTGTATGTAAGGATGTAACACA 57.972 37.500 0.00 0.00 36.43 3.72
266 267 5.865552 ACGTGTATGTAAGGATGTAACACAC 59.134 40.000 0.00 0.00 36.43 3.82
267 268 5.865013 CGTGTATGTAAGGATGTAACACACA 59.135 40.000 0.00 0.00 42.69 3.72
304 305 9.807649 AATTCATAATGAAATACCTTGAGTTGC 57.192 29.630 0.00 0.00 40.12 4.17
305 306 7.015226 TCATAATGAAATACCTTGAGTTGCG 57.985 36.000 0.00 0.00 0.00 4.85
306 307 6.821160 TCATAATGAAATACCTTGAGTTGCGA 59.179 34.615 0.00 0.00 0.00 5.10
307 308 4.946784 ATGAAATACCTTGAGTTGCGAC 57.053 40.909 0.00 0.00 0.00 5.19
308 309 3.071479 TGAAATACCTTGAGTTGCGACC 58.929 45.455 0.00 0.00 0.00 4.79
309 310 3.244422 TGAAATACCTTGAGTTGCGACCT 60.244 43.478 0.00 0.00 0.00 3.85
310 311 4.020928 TGAAATACCTTGAGTTGCGACCTA 60.021 41.667 0.00 0.00 0.00 3.08
311 312 4.755266 AATACCTTGAGTTGCGACCTAT 57.245 40.909 0.00 0.00 0.00 2.57
312 313 5.864418 AATACCTTGAGTTGCGACCTATA 57.136 39.130 0.00 0.00 0.00 1.31
313 314 3.521947 ACCTTGAGTTGCGACCTATAC 57.478 47.619 0.00 0.00 0.00 1.47
314 315 2.829720 ACCTTGAGTTGCGACCTATACA 59.170 45.455 0.00 0.00 0.00 2.29
315 316 3.259876 ACCTTGAGTTGCGACCTATACAA 59.740 43.478 0.00 0.09 0.00 2.41
316 317 4.250464 CCTTGAGTTGCGACCTATACAAA 58.750 43.478 0.00 0.00 0.00 2.83
317 318 4.876107 CCTTGAGTTGCGACCTATACAAAT 59.124 41.667 0.00 0.00 0.00 2.32
318 319 6.046593 CCTTGAGTTGCGACCTATACAAATA 58.953 40.000 0.00 0.00 0.00 1.40
319 320 6.537301 CCTTGAGTTGCGACCTATACAAATAA 59.463 38.462 0.00 0.00 0.00 1.40
320 321 7.065324 CCTTGAGTTGCGACCTATACAAATAAA 59.935 37.037 0.00 0.00 0.00 1.40
321 322 7.908827 TGAGTTGCGACCTATACAAATAAAA 57.091 32.000 0.00 0.00 0.00 1.52
322 323 8.325421 TGAGTTGCGACCTATACAAATAAAAA 57.675 30.769 0.00 0.00 0.00 1.94
342 343 6.916360 AAAAAGACAAATTCATGGCCTAGA 57.084 33.333 3.32 0.00 0.00 2.43
343 344 6.521151 AAAAGACAAATTCATGGCCTAGAG 57.479 37.500 3.32 0.00 0.00 2.43
344 345 3.549794 AGACAAATTCATGGCCTAGAGC 58.450 45.455 3.32 0.00 42.60 4.09
345 346 3.054139 AGACAAATTCATGGCCTAGAGCA 60.054 43.478 3.32 0.00 46.50 4.26
346 347 3.285484 ACAAATTCATGGCCTAGAGCAG 58.715 45.455 3.32 0.00 46.50 4.24
347 348 1.978454 AATTCATGGCCTAGAGCAGC 58.022 50.000 3.32 0.00 46.50 5.25
352 353 3.560989 GGCCTAGAGCAGCCTCAT 58.439 61.111 0.00 0.00 46.14 2.90
353 354 1.835693 GGCCTAGAGCAGCCTCATT 59.164 57.895 0.00 0.00 46.14 2.57
354 355 0.182299 GGCCTAGAGCAGCCTCATTT 59.818 55.000 0.00 0.00 46.14 2.32
355 356 1.409381 GGCCTAGAGCAGCCTCATTTT 60.409 52.381 0.00 0.00 46.14 1.82
356 357 1.674962 GCCTAGAGCAGCCTCATTTTG 59.325 52.381 0.00 0.00 42.97 2.44
357 358 2.681976 GCCTAGAGCAGCCTCATTTTGA 60.682 50.000 0.00 0.00 42.97 2.69
358 359 3.818180 CCTAGAGCAGCCTCATTTTGAT 58.182 45.455 0.00 0.00 40.68 2.57
359 360 4.744867 GCCTAGAGCAGCCTCATTTTGATA 60.745 45.833 0.00 0.00 42.97 2.15
360 361 5.558818 CCTAGAGCAGCCTCATTTTGATAT 58.441 41.667 0.00 0.00 40.68 1.63
361 362 6.705302 CCTAGAGCAGCCTCATTTTGATATA 58.295 40.000 0.00 0.00 40.68 0.86
362 363 7.337167 CCTAGAGCAGCCTCATTTTGATATAT 58.663 38.462 0.00 0.00 40.68 0.86
363 364 7.828223 CCTAGAGCAGCCTCATTTTGATATATT 59.172 37.037 0.00 0.00 40.68 1.28
364 365 9.228949 CTAGAGCAGCCTCATTTTGATATATTT 57.771 33.333 0.00 0.00 40.68 1.40
365 366 8.474710 AGAGCAGCCTCATTTTGATATATTTT 57.525 30.769 0.00 0.00 40.68 1.82
366 367 8.358148 AGAGCAGCCTCATTTTGATATATTTTG 58.642 33.333 0.00 0.00 40.68 2.44
367 368 8.241497 AGCAGCCTCATTTTGATATATTTTGA 57.759 30.769 0.00 0.00 0.00 2.69
368 369 8.698210 AGCAGCCTCATTTTGATATATTTTGAA 58.302 29.630 0.00 0.00 0.00 2.69
369 370 8.758715 GCAGCCTCATTTTGATATATTTTGAAC 58.241 33.333 0.00 0.00 0.00 3.18
388 389 8.994429 TTTGAACTGAAAATTTACACACATGT 57.006 26.923 0.00 0.00 43.30 3.21
403 404 4.707030 CACATGTGTGTTATGCCTTCAT 57.293 40.909 18.03 0.00 40.96 2.57
404 405 4.417506 CACATGTGTGTTATGCCTTCATG 58.582 43.478 18.03 0.00 40.96 3.07
405 406 4.081406 ACATGTGTGTTATGCCTTCATGT 58.919 39.130 0.00 0.00 39.25 3.21
406 407 5.123661 CACATGTGTGTTATGCCTTCATGTA 59.876 40.000 18.03 0.00 41.14 2.29
407 408 5.123820 ACATGTGTGTTATGCCTTCATGTAC 59.876 40.000 0.00 0.00 41.23 2.90
408 409 4.646572 TGTGTGTTATGCCTTCATGTACA 58.353 39.130 0.00 0.00 34.22 2.90
409 410 5.252547 TGTGTGTTATGCCTTCATGTACAT 58.747 37.500 1.41 1.41 33.90 2.29
410 411 5.353956 TGTGTGTTATGCCTTCATGTACATC 59.646 40.000 5.07 0.00 33.90 3.06
411 412 5.586243 GTGTGTTATGCCTTCATGTACATCT 59.414 40.000 5.07 0.00 33.90 2.90
412 413 5.585844 TGTGTTATGCCTTCATGTACATCTG 59.414 40.000 5.07 0.00 33.90 2.90
413 414 5.586243 GTGTTATGCCTTCATGTACATCTGT 59.414 40.000 5.07 0.00 33.90 3.41
414 415 6.761242 GTGTTATGCCTTCATGTACATCTGTA 59.239 38.462 5.07 0.00 33.90 2.74
415 416 7.442364 GTGTTATGCCTTCATGTACATCTGTAT 59.558 37.037 5.07 2.83 33.90 2.29
416 417 7.992608 TGTTATGCCTTCATGTACATCTGTATT 59.007 33.333 5.07 0.00 34.22 1.89
417 418 8.840321 GTTATGCCTTCATGTACATCTGTATTT 58.160 33.333 5.07 0.00 34.22 1.40
418 419 7.886629 ATGCCTTCATGTACATCTGTATTTT 57.113 32.000 5.07 0.00 32.54 1.82
419 420 7.701539 TGCCTTCATGTACATCTGTATTTTT 57.298 32.000 5.07 0.00 32.54 1.94
488 489 5.767277 AAATTTGAATTTGGAGGCCTCAT 57.233 34.783 33.29 16.40 37.24 2.90
489 490 5.767277 AATTTGAATTTGGAGGCCTCATT 57.233 34.783 33.29 23.58 0.00 2.57
490 491 4.540359 TTTGAATTTGGAGGCCTCATTG 57.460 40.909 33.29 0.00 0.00 2.82
491 492 2.459644 TGAATTTGGAGGCCTCATTGG 58.540 47.619 33.29 0.00 39.35 3.16
492 493 2.042842 TGAATTTGGAGGCCTCATTGGA 59.957 45.455 33.29 14.64 38.35 3.53
493 494 2.449137 ATTTGGAGGCCTCATTGGAG 57.551 50.000 33.29 0.00 41.02 3.86
501 502 2.906458 CTCATTGGAGGCCGAGCT 59.094 61.111 0.00 0.00 37.51 4.09
502 503 1.227497 CTCATTGGAGGCCGAGCTC 60.227 63.158 2.73 2.73 37.51 4.09
503 504 2.203126 CATTGGAGGCCGAGCTCC 60.203 66.667 8.47 0.00 40.05 4.70
504 505 2.688666 ATTGGAGGCCGAGCTCCA 60.689 61.111 8.47 7.35 46.84 3.86
506 507 2.927856 TGGAGGCCGAGCTCCAAA 60.928 61.111 8.96 0.00 45.68 3.28
507 508 2.351276 GGAGGCCGAGCTCCAAAA 59.649 61.111 8.47 0.00 39.45 2.44
508 509 1.746991 GGAGGCCGAGCTCCAAAAG 60.747 63.158 8.47 0.00 39.45 2.27
509 510 1.746991 GAGGCCGAGCTCCAAAAGG 60.747 63.158 8.47 4.02 0.00 3.11
510 511 2.751837 GGCCGAGCTCCAAAAGGG 60.752 66.667 8.47 3.22 38.37 3.95
511 512 2.034221 GCCGAGCTCCAAAAGGGT 59.966 61.111 8.47 0.00 38.11 4.34
512 513 1.603739 GCCGAGCTCCAAAAGGGTT 60.604 57.895 8.47 0.00 38.11 4.11
513 514 1.179174 GCCGAGCTCCAAAAGGGTTT 61.179 55.000 8.47 0.00 38.11 3.27
514 515 0.881796 CCGAGCTCCAAAAGGGTTTC 59.118 55.000 8.47 0.00 38.11 2.78
515 516 0.881796 CGAGCTCCAAAAGGGTTTCC 59.118 55.000 8.47 0.00 38.11 3.13
516 517 0.881796 GAGCTCCAAAAGGGTTTCCG 59.118 55.000 0.87 0.00 38.33 4.30
526 527 0.899720 AGGGTTTCCGCGAGATAACA 59.100 50.000 8.23 0.00 38.33 2.41
613 614 8.682710 GGCACCATGTACTTTGATATAAGAAAA 58.317 33.333 0.00 0.00 0.00 2.29
635 636 9.994432 GAAAATCTCAGTCAAATTGTATACAGG 57.006 33.333 5.56 0.00 0.00 4.00
655 656 3.595173 GGCAGAACCTTTTTGTTGTTGT 58.405 40.909 0.00 0.00 34.51 3.32
656 657 4.749976 GGCAGAACCTTTTTGTTGTTGTA 58.250 39.130 0.00 0.00 34.51 2.41
659 660 6.238076 GGCAGAACCTTTTTGTTGTTGTAATG 60.238 38.462 0.00 0.00 34.51 1.90
911 958 7.389790 ACCACCCTATATATATCATCCCCATT 58.610 38.462 0.00 0.00 0.00 3.16
1143 1195 1.420138 ACAACGAGACCCAAAGACCAT 59.580 47.619 0.00 0.00 0.00 3.55
1215 1270 2.334977 ACCACACCACCATCTCTACAA 58.665 47.619 0.00 0.00 0.00 2.41
1508 1581 2.879372 TTGCACACTCCACAGCAAA 58.121 47.368 0.00 0.00 43.24 3.68
1509 1582 0.455410 TTGCACACTCCACAGCAAAC 59.545 50.000 0.00 0.00 43.24 2.93
1545 1624 6.016777 GCTCATTTTATTCATACCCACTCCTG 60.017 42.308 0.00 0.00 0.00 3.86
1658 1737 0.392193 CTGAGCTTCCATGGCTTCGT 60.392 55.000 6.96 0.00 40.40 3.85
1693 1775 1.725931 GCGAAGATGCCAAGAACAACG 60.726 52.381 0.00 0.00 0.00 4.10
1697 1779 0.874390 GATGCCAAGAACAACGCTGA 59.126 50.000 0.00 0.00 0.00 4.26
1740 1828 2.594303 CAACAACCCTCGCCTGCA 60.594 61.111 0.00 0.00 0.00 4.41
1839 1927 2.467946 CTTCACCGTCGCTACACCGT 62.468 60.000 0.00 0.00 0.00 4.83
1893 1981 2.124151 GTTGGGGAGCGGCATGAT 60.124 61.111 1.45 0.00 0.00 2.45
2095 2211 7.426606 AAGTTGTTGTACCCAAATTAAGGTT 57.573 32.000 4.75 0.00 37.59 3.50
2184 2308 2.844839 GGGAGGATGGGACGAGGG 60.845 72.222 0.00 0.00 0.00 4.30
2280 2404 4.792528 GCTGAATAGCTGAAGTGTGATC 57.207 45.455 0.00 0.00 46.57 2.92
2305 2429 2.092699 GGAAGAATTGCCCACTCTAGCT 60.093 50.000 0.00 0.00 0.00 3.32
2384 2508 2.222729 GCGTCCAAGTTATAGCGTGTTG 60.223 50.000 2.23 0.00 0.00 3.33
2391 2515 6.038382 TCCAAGTTATAGCGTGTTGTTTTCAA 59.962 34.615 2.23 0.00 37.48 2.69
2465 2596 1.047002 AGCAGAGAAGTGTGAGCTGT 58.953 50.000 0.00 0.00 0.00 4.40
2683 2815 4.927425 TGTCTACACGGAAATTGCTAAGAC 59.073 41.667 0.00 0.00 0.00 3.01
2758 2922 1.405821 GACGTCCCTGGTCTATCTGTG 59.594 57.143 3.51 0.00 0.00 3.66
2845 3010 4.401925 AGGCAGACAACAATAGAAAGCTT 58.598 39.130 0.00 0.00 0.00 3.74
2881 3046 1.003573 CACTCTTAGCCCCCTCCCT 59.996 63.158 0.00 0.00 0.00 4.20
2882 3047 0.621862 CACTCTTAGCCCCCTCCCTT 60.622 60.000 0.00 0.00 0.00 3.95
2921 3086 4.782019 TTGTCTGCCTTATCGCAATTTT 57.218 36.364 0.00 0.00 38.56 1.82
2925 3090 3.111098 CTGCCTTATCGCAATTTTGAGC 58.889 45.455 0.00 0.00 38.56 4.26
2927 3092 2.719798 CCTTATCGCAATTTTGAGCCG 58.280 47.619 0.00 0.00 0.00 5.52
2929 3094 0.380378 TATCGCAATTTTGAGCCGGC 59.620 50.000 21.89 21.89 0.00 6.13
2935 3100 2.753296 CAATTTTGAGCCGGCAAAGAA 58.247 42.857 31.54 17.60 38.80 2.52
2937 3102 3.683365 ATTTTGAGCCGGCAAAGAATT 57.317 38.095 31.54 5.22 38.80 2.17
2939 3104 0.521291 TTGAGCCGGCAAAGAATTCG 59.479 50.000 31.54 0.00 0.00 3.34
2941 3106 1.922135 GAGCCGGCAAAGAATTCGCA 61.922 55.000 31.54 0.00 0.00 5.10
2945 3110 1.215382 GGCAAAGAATTCGCACCCC 59.785 57.895 0.00 0.00 0.00 4.95
2947 3112 1.250840 GCAAAGAATTCGCACCCCCT 61.251 55.000 0.00 0.00 0.00 4.79
2948 3113 0.811281 CAAAGAATTCGCACCCCCTC 59.189 55.000 0.00 0.00 0.00 4.30
2949 3114 0.698818 AAAGAATTCGCACCCCCTCT 59.301 50.000 0.00 0.00 0.00 3.69
2950 3115 0.253327 AAGAATTCGCACCCCCTCTC 59.747 55.000 0.00 0.00 0.00 3.20
2951 3116 1.153147 GAATTCGCACCCCCTCTCC 60.153 63.158 0.00 0.00 0.00 3.71
2952 3117 2.610532 GAATTCGCACCCCCTCTCCC 62.611 65.000 0.00 0.00 0.00 4.30
2961 3126 4.693915 CCCTCTCCCCCACCCCAA 62.694 72.222 0.00 0.00 0.00 4.12
2962 3127 2.287194 CCTCTCCCCCACCCCAAT 60.287 66.667 0.00 0.00 0.00 3.16
2963 3128 1.935931 CCTCTCCCCCACCCCAATT 60.936 63.158 0.00 0.00 0.00 2.32
2964 3129 1.307647 CTCTCCCCCACCCCAATTG 59.692 63.158 0.00 0.00 0.00 2.32
2991 3156 2.388310 TGCCATGCCATGATTTTGTG 57.612 45.000 6.18 0.00 0.00 3.33
2997 3162 2.596346 TGCCATGATTTTGTGTCACCT 58.404 42.857 0.00 0.00 0.00 4.00
3004 3169 0.817634 TTTTGTGTCACCTCGCCAGG 60.818 55.000 0.00 0.00 46.87 4.45
3055 3220 1.084370 AGTCGGCTACAAGCGAATGC 61.084 55.000 0.00 0.00 43.62 3.56
3059 3224 2.823829 GCTACAAGCGAATGCCCCG 61.824 63.158 0.00 0.00 44.31 5.73
3078 3243 0.788391 GCACCGTGGTCGTTTTAGAG 59.212 55.000 0.00 0.00 35.01 2.43
3079 3244 1.603678 GCACCGTGGTCGTTTTAGAGA 60.604 52.381 0.00 0.00 35.01 3.10
3080 3245 2.746269 CACCGTGGTCGTTTTAGAGAA 58.254 47.619 0.00 0.00 35.01 2.87
3081 3246 3.323243 CACCGTGGTCGTTTTAGAGAAT 58.677 45.455 0.00 0.00 35.01 2.40
3082 3247 3.122948 CACCGTGGTCGTTTTAGAGAATG 59.877 47.826 0.00 0.00 35.01 2.67
3083 3248 3.243975 ACCGTGGTCGTTTTAGAGAATGT 60.244 43.478 0.00 0.00 35.01 2.71
3084 3249 3.744426 CCGTGGTCGTTTTAGAGAATGTT 59.256 43.478 0.00 0.00 35.01 2.71
3085 3250 4.377022 CCGTGGTCGTTTTAGAGAATGTTG 60.377 45.833 0.00 0.00 35.01 3.33
3086 3251 4.210537 CGTGGTCGTTTTAGAGAATGTTGT 59.789 41.667 0.00 0.00 0.00 3.32
3087 3252 5.611844 CGTGGTCGTTTTAGAGAATGTTGTC 60.612 44.000 0.00 0.00 0.00 3.18
3088 3253 4.446385 TGGTCGTTTTAGAGAATGTTGTCG 59.554 41.667 0.00 0.00 0.00 4.35
3089 3254 4.446719 GGTCGTTTTAGAGAATGTTGTCGT 59.553 41.667 0.00 0.00 0.00 4.34
3090 3255 5.363517 GTCGTTTTAGAGAATGTTGTCGTG 58.636 41.667 0.00 0.00 0.00 4.35
3091 3256 4.446385 TCGTTTTAGAGAATGTTGTCGTGG 59.554 41.667 0.00 0.00 0.00 4.94
3092 3257 4.210537 CGTTTTAGAGAATGTTGTCGTGGT 59.789 41.667 0.00 0.00 0.00 4.16
3093 3258 5.277154 CGTTTTAGAGAATGTTGTCGTGGTT 60.277 40.000 0.00 0.00 0.00 3.67
3094 3259 5.917541 TTTAGAGAATGTTGTCGTGGTTC 57.082 39.130 0.00 0.00 0.00 3.62
3095 3260 3.753294 AGAGAATGTTGTCGTGGTTCT 57.247 42.857 0.00 0.00 32.23 3.01
3096 3261 4.866508 AGAGAATGTTGTCGTGGTTCTA 57.133 40.909 0.00 0.00 29.89 2.10
3097 3262 5.209818 AGAGAATGTTGTCGTGGTTCTAA 57.790 39.130 0.00 0.00 29.89 2.10
3098 3263 5.230942 AGAGAATGTTGTCGTGGTTCTAAG 58.769 41.667 0.00 0.00 29.89 2.18
3099 3264 5.010719 AGAGAATGTTGTCGTGGTTCTAAGA 59.989 40.000 0.00 0.00 29.89 2.10
3100 3265 4.989168 AGAATGTTGTCGTGGTTCTAAGAC 59.011 41.667 0.00 0.00 0.00 3.01
3101 3266 4.602340 ATGTTGTCGTGGTTCTAAGACT 57.398 40.909 4.39 0.00 34.92 3.24
3102 3267 3.713288 TGTTGTCGTGGTTCTAAGACTG 58.287 45.455 4.39 0.00 34.92 3.51
3103 3268 3.382227 TGTTGTCGTGGTTCTAAGACTGA 59.618 43.478 4.39 0.00 34.92 3.41
3104 3269 3.637998 TGTCGTGGTTCTAAGACTGAC 57.362 47.619 4.39 0.00 34.92 3.51
3105 3270 2.953648 TGTCGTGGTTCTAAGACTGACA 59.046 45.455 4.39 0.00 34.92 3.58
3106 3271 3.004419 TGTCGTGGTTCTAAGACTGACAG 59.996 47.826 0.00 0.00 34.92 3.51
3107 3272 3.004524 GTCGTGGTTCTAAGACTGACAGT 59.995 47.826 8.12 8.12 0.00 3.55
3108 3273 4.214971 GTCGTGGTTCTAAGACTGACAGTA 59.785 45.833 8.41 0.00 0.00 2.74
3109 3274 4.454847 TCGTGGTTCTAAGACTGACAGTAG 59.545 45.833 8.41 2.63 0.00 2.57
3110 3275 4.454847 CGTGGTTCTAAGACTGACAGTAGA 59.545 45.833 8.41 5.24 0.00 2.59
3111 3276 5.048921 CGTGGTTCTAAGACTGACAGTAGAA 60.049 44.000 8.41 11.30 31.72 2.10
3112 3277 6.514541 CGTGGTTCTAAGACTGACAGTAGAAA 60.515 42.308 17.07 4.55 35.07 2.52
3113 3278 6.864165 GTGGTTCTAAGACTGACAGTAGAAAG 59.136 42.308 17.07 9.57 35.07 2.62
3114 3279 6.015350 TGGTTCTAAGACTGACAGTAGAAAGG 60.015 42.308 17.07 4.38 35.07 3.11
3115 3280 6.391537 GTTCTAAGACTGACAGTAGAAAGGG 58.608 44.000 17.07 3.11 35.07 3.95
3116 3281 5.017490 TCTAAGACTGACAGTAGAAAGGGG 58.983 45.833 8.41 0.00 0.00 4.79
3117 3282 2.541466 AGACTGACAGTAGAAAGGGGG 58.459 52.381 8.41 0.00 0.00 5.40
3132 3297 3.477783 GGGGGTAGGTATGGAGAGG 57.522 63.158 0.00 0.00 0.00 3.69
3133 3298 0.836830 GGGGGTAGGTATGGAGAGGC 60.837 65.000 0.00 0.00 0.00 4.70
3134 3299 0.105142 GGGGTAGGTATGGAGAGGCA 60.105 60.000 0.00 0.00 0.00 4.75
3135 3300 1.694693 GGGGTAGGTATGGAGAGGCAA 60.695 57.143 0.00 0.00 0.00 4.52
3136 3301 1.694696 GGGTAGGTATGGAGAGGCAAG 59.305 57.143 0.00 0.00 0.00 4.01
3137 3302 2.679082 GGTAGGTATGGAGAGGCAAGA 58.321 52.381 0.00 0.00 0.00 3.02
3138 3303 2.365941 GGTAGGTATGGAGAGGCAAGAC 59.634 54.545 0.00 0.00 0.00 3.01
3139 3304 1.501582 AGGTATGGAGAGGCAAGACC 58.498 55.000 0.00 0.00 39.61 3.85
3149 3314 3.393472 GGCAAGACCTCAGCTATGG 57.607 57.895 2.93 2.93 34.51 2.74
3150 3315 0.543749 GGCAAGACCTCAGCTATGGT 59.456 55.000 9.28 9.28 39.60 3.55
3151 3316 1.661341 GCAAGACCTCAGCTATGGTG 58.339 55.000 13.70 2.55 36.59 4.17
3152 3317 1.208052 GCAAGACCTCAGCTATGGTGA 59.792 52.381 13.70 0.00 37.74 4.02
3153 3318 2.355108 GCAAGACCTCAGCTATGGTGAA 60.355 50.000 13.70 0.00 39.59 3.18
3154 3319 3.529533 CAAGACCTCAGCTATGGTGAAG 58.470 50.000 13.70 0.00 39.59 3.02
3155 3320 2.114616 AGACCTCAGCTATGGTGAAGG 58.885 52.381 13.70 7.13 39.59 3.46
3156 3321 1.834263 GACCTCAGCTATGGTGAAGGT 59.166 52.381 13.70 15.28 40.92 3.50
3157 3322 1.556911 ACCTCAGCTATGGTGAAGGTG 59.443 52.381 8.79 0.00 39.59 4.00
3158 3323 1.556911 CCTCAGCTATGGTGAAGGTGT 59.443 52.381 1.22 0.00 41.92 4.16
3159 3324 2.766263 CCTCAGCTATGGTGAAGGTGTA 59.234 50.000 1.22 0.00 41.92 2.90
3160 3325 3.430929 CCTCAGCTATGGTGAAGGTGTAC 60.431 52.174 1.22 0.00 41.92 2.90
3161 3326 3.169908 TCAGCTATGGTGAAGGTGTACA 58.830 45.455 0.00 0.00 41.92 2.90
3162 3327 3.056107 TCAGCTATGGTGAAGGTGTACAC 60.056 47.826 18.01 18.01 41.92 2.90
3163 3328 2.903784 AGCTATGGTGAAGGTGTACACA 59.096 45.455 26.51 5.44 38.57 3.72
3164 3329 3.000727 GCTATGGTGAAGGTGTACACAC 58.999 50.000 26.51 15.80 45.72 3.82
3165 3330 7.755444 CAGCTATGGTGAAGGTGTACACACA 62.755 48.000 26.51 19.01 39.80 3.72
3175 3340 3.631145 GTGTACACACAGGAGTTACGA 57.369 47.619 21.14 0.00 45.75 3.43
3176 3341 3.562505 GTGTACACACAGGAGTTACGAG 58.437 50.000 21.14 0.00 45.75 4.18
3177 3342 3.004106 GTGTACACACAGGAGTTACGAGT 59.996 47.826 21.14 0.00 45.75 4.18
3178 3343 3.633525 TGTACACACAGGAGTTACGAGTT 59.366 43.478 0.00 0.00 0.00 3.01
3179 3344 3.366440 ACACACAGGAGTTACGAGTTC 57.634 47.619 0.00 0.00 0.00 3.01
3180 3345 2.691526 ACACACAGGAGTTACGAGTTCA 59.308 45.455 0.00 0.00 0.00 3.18
3181 3346 3.243434 ACACACAGGAGTTACGAGTTCAG 60.243 47.826 0.00 0.00 0.00 3.02
3182 3347 2.296471 ACACAGGAGTTACGAGTTCAGG 59.704 50.000 0.00 0.00 0.00 3.86
3183 3348 1.272769 ACAGGAGTTACGAGTTCAGGC 59.727 52.381 0.00 0.00 0.00 4.85
3184 3349 0.896226 AGGAGTTACGAGTTCAGGCC 59.104 55.000 0.00 0.00 0.00 5.19
3185 3350 0.108281 GGAGTTACGAGTTCAGGCCC 60.108 60.000 0.00 0.00 0.00 5.80
3186 3351 0.896226 GAGTTACGAGTTCAGGCCCT 59.104 55.000 0.00 0.00 0.00 5.19
3187 3352 1.275573 GAGTTACGAGTTCAGGCCCTT 59.724 52.381 0.00 0.00 0.00 3.95
3188 3353 1.275573 AGTTACGAGTTCAGGCCCTTC 59.724 52.381 0.00 0.00 0.00 3.46
3189 3354 0.245539 TTACGAGTTCAGGCCCTTCG 59.754 55.000 0.00 4.69 37.31 3.79
3190 3355 2.221906 TACGAGTTCAGGCCCTTCGC 62.222 60.000 0.00 0.00 34.84 4.70
3191 3356 2.815647 GAGTTCAGGCCCTTCGCG 60.816 66.667 0.00 0.00 38.94 5.87
3192 3357 4.394712 AGTTCAGGCCCTTCGCGG 62.395 66.667 6.13 0.00 38.94 6.46
3193 3358 4.388499 GTTCAGGCCCTTCGCGGA 62.388 66.667 6.13 0.00 38.94 5.54
3194 3359 4.082523 TTCAGGCCCTTCGCGGAG 62.083 66.667 7.67 7.67 38.94 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.066215 CATGTACTACACAGCAGCCCA 60.066 52.381 0.00 0.00 41.51 5.36
1 2 1.656652 CATGTACTACACAGCAGCCC 58.343 55.000 0.00 0.00 41.51 5.19
2 3 1.009829 GCATGTACTACACAGCAGCC 58.990 55.000 9.51 0.00 41.51 4.85
3 4 1.725641 TGCATGTACTACACAGCAGC 58.274 50.000 12.04 4.20 41.51 5.25
4 5 4.747540 TTTTGCATGTACTACACAGCAG 57.252 40.909 14.43 0.00 41.51 4.24
5 6 5.459768 CATTTTTGCATGTACTACACAGCA 58.540 37.500 12.04 12.04 41.51 4.41
6 7 4.324402 GCATTTTTGCATGTACTACACAGC 59.676 41.667 8.02 8.02 41.51 4.40
7 8 5.702865 AGCATTTTTGCATGTACTACACAG 58.297 37.500 0.33 0.00 41.51 3.66
8 9 5.703978 AGCATTTTTGCATGTACTACACA 57.296 34.783 0.33 0.00 42.69 3.72
9 10 6.607689 TGTAGCATTTTTGCATGTACTACAC 58.392 36.000 5.85 0.00 35.18 2.90
10 11 6.809630 TGTAGCATTTTTGCATGTACTACA 57.190 33.333 5.85 5.85 37.12 2.74
11 12 6.248420 CGTTGTAGCATTTTTGCATGTACTAC 59.752 38.462 0.33 0.00 37.25 2.73
12 13 6.072948 ACGTTGTAGCATTTTTGCATGTACTA 60.073 34.615 0.33 0.00 37.25 1.82
13 14 5.153513 CGTTGTAGCATTTTTGCATGTACT 58.846 37.500 0.33 0.00 37.25 2.73
14 15 4.915085 ACGTTGTAGCATTTTTGCATGTAC 59.085 37.500 0.33 0.00 37.25 2.90
15 16 5.114785 ACGTTGTAGCATTTTTGCATGTA 57.885 34.783 0.33 0.00 37.25 2.29
16 17 3.976169 ACGTTGTAGCATTTTTGCATGT 58.024 36.364 0.33 0.00 37.25 3.21
17 18 4.970472 AACGTTGTAGCATTTTTGCATG 57.030 36.364 0.00 0.00 37.25 4.06
18 19 7.650834 AAATAACGTTGTAGCATTTTTGCAT 57.349 28.000 11.99 0.00 37.25 3.96
19 20 7.010552 ACAAAATAACGTTGTAGCATTTTTGCA 59.989 29.630 11.99 0.00 37.44 4.08
20 21 7.341446 ACAAAATAACGTTGTAGCATTTTTGC 58.659 30.769 11.99 0.00 37.44 3.68
21 22 9.695884 AAACAAAATAACGTTGTAGCATTTTTG 57.304 25.926 11.99 12.62 38.24 2.44
24 25 8.696175 GCTAAACAAAATAACGTTGTAGCATTT 58.304 29.630 11.99 5.60 38.24 2.32
25 26 7.863375 TGCTAAACAAAATAACGTTGTAGCATT 59.137 29.630 11.99 0.00 38.24 3.56
26 27 7.364200 TGCTAAACAAAATAACGTTGTAGCAT 58.636 30.769 11.99 0.00 38.24 3.79
27 28 6.726230 TGCTAAACAAAATAACGTTGTAGCA 58.274 32.000 11.99 11.38 38.24 3.49
28 29 7.252865 CGATGCTAAACAAAATAACGTTGTAGC 60.253 37.037 11.99 8.80 38.24 3.58
29 30 7.215568 CCGATGCTAAACAAAATAACGTTGTAG 59.784 37.037 11.99 0.82 38.24 2.74
30 31 7.016466 CCGATGCTAAACAAAATAACGTTGTA 58.984 34.615 11.99 0.00 38.24 2.41
31 32 5.854338 CCGATGCTAAACAAAATAACGTTGT 59.146 36.000 11.99 0.00 40.92 3.32
32 33 6.081049 TCCGATGCTAAACAAAATAACGTTG 58.919 36.000 11.99 0.00 0.00 4.10
33 34 6.243811 TCCGATGCTAAACAAAATAACGTT 57.756 33.333 5.88 5.88 0.00 3.99
34 35 5.866335 TCCGATGCTAAACAAAATAACGT 57.134 34.783 0.00 0.00 0.00 3.99
35 36 7.111593 GCTATTCCGATGCTAAACAAAATAACG 59.888 37.037 0.00 0.00 0.00 3.18
36 37 7.913297 TGCTATTCCGATGCTAAACAAAATAAC 59.087 33.333 0.00 0.00 0.00 1.89
37 38 7.913297 GTGCTATTCCGATGCTAAACAAAATAA 59.087 33.333 0.00 0.00 0.00 1.40
38 39 7.414436 GTGCTATTCCGATGCTAAACAAAATA 58.586 34.615 0.00 0.00 0.00 1.40
39 40 6.265577 GTGCTATTCCGATGCTAAACAAAAT 58.734 36.000 0.00 0.00 0.00 1.82
40 41 5.636837 GTGCTATTCCGATGCTAAACAAAA 58.363 37.500 0.00 0.00 0.00 2.44
41 42 4.201773 CGTGCTATTCCGATGCTAAACAAA 60.202 41.667 0.00 0.00 0.00 2.83
42 43 3.308595 CGTGCTATTCCGATGCTAAACAA 59.691 43.478 0.00 0.00 0.00 2.83
43 44 2.863740 CGTGCTATTCCGATGCTAAACA 59.136 45.455 0.00 0.00 0.00 2.83
44 45 2.348591 GCGTGCTATTCCGATGCTAAAC 60.349 50.000 0.00 0.00 0.00 2.01
45 46 1.864711 GCGTGCTATTCCGATGCTAAA 59.135 47.619 0.00 0.00 0.00 1.85
46 47 1.068588 AGCGTGCTATTCCGATGCTAA 59.931 47.619 0.00 0.00 0.00 3.09
47 48 0.673985 AGCGTGCTATTCCGATGCTA 59.326 50.000 0.00 0.00 0.00 3.49
48 49 0.673985 TAGCGTGCTATTCCGATGCT 59.326 50.000 0.00 0.00 35.12 3.79
49 50 1.714794 ATAGCGTGCTATTCCGATGC 58.285 50.000 8.54 0.00 35.92 3.91
50 51 4.234574 TGTTATAGCGTGCTATTCCGATG 58.765 43.478 18.62 0.00 39.65 3.84
51 52 4.514781 TGTTATAGCGTGCTATTCCGAT 57.485 40.909 18.62 0.00 39.65 4.18
52 53 3.994204 TGTTATAGCGTGCTATTCCGA 57.006 42.857 18.62 0.00 39.65 4.55
53 54 4.234574 TCATGTTATAGCGTGCTATTCCG 58.765 43.478 18.62 5.26 39.65 4.30
54 55 6.727824 ATTCATGTTATAGCGTGCTATTCC 57.272 37.500 18.62 10.57 39.65 3.01
55 56 9.087424 TGATATTCATGTTATAGCGTGCTATTC 57.913 33.333 18.62 12.80 39.65 1.75
56 57 9.091784 CTGATATTCATGTTATAGCGTGCTATT 57.908 33.333 18.62 4.72 39.65 1.73
57 58 7.223582 GCTGATATTCATGTTATAGCGTGCTAT 59.776 37.037 17.65 17.65 41.58 2.97
58 59 6.531594 GCTGATATTCATGTTATAGCGTGCTA 59.468 38.462 3.73 3.73 0.00 3.49
59 60 5.349817 GCTGATATTCATGTTATAGCGTGCT 59.650 40.000 4.03 0.00 0.00 4.40
60 61 5.120674 TGCTGATATTCATGTTATAGCGTGC 59.879 40.000 4.03 5.07 32.88 5.34
61 62 6.671641 GCTGCTGATATTCATGTTATAGCGTG 60.672 42.308 2.54 2.54 32.88 5.34
62 63 5.349817 GCTGCTGATATTCATGTTATAGCGT 59.650 40.000 0.00 0.00 32.88 5.07
63 64 5.499812 CGCTGCTGATATTCATGTTATAGCG 60.500 44.000 13.55 13.55 42.14 4.26
64 65 5.578336 TCGCTGCTGATATTCATGTTATAGC 59.422 40.000 0.00 0.00 0.00 2.97
65 66 6.237781 GCTCGCTGCTGATATTCATGTTATAG 60.238 42.308 0.00 0.00 38.95 1.31
66 67 5.578336 GCTCGCTGCTGATATTCATGTTATA 59.422 40.000 0.00 0.00 38.95 0.98
67 68 4.391216 GCTCGCTGCTGATATTCATGTTAT 59.609 41.667 0.00 0.00 38.95 1.89
68 69 3.742882 GCTCGCTGCTGATATTCATGTTA 59.257 43.478 0.00 0.00 38.95 2.41
69 70 2.547211 GCTCGCTGCTGATATTCATGTT 59.453 45.455 0.00 0.00 38.95 2.71
70 71 2.141517 GCTCGCTGCTGATATTCATGT 58.858 47.619 0.00 0.00 38.95 3.21
71 72 2.140717 TGCTCGCTGCTGATATTCATG 58.859 47.619 0.00 0.00 43.37 3.07
72 73 2.538512 TGCTCGCTGCTGATATTCAT 57.461 45.000 0.00 0.00 43.37 2.57
73 74 2.314323 TTGCTCGCTGCTGATATTCA 57.686 45.000 0.00 0.00 43.37 2.57
74 75 3.680642 TTTTGCTCGCTGCTGATATTC 57.319 42.857 0.00 0.00 43.37 1.75
75 76 4.644103 AATTTTGCTCGCTGCTGATATT 57.356 36.364 0.00 0.00 43.37 1.28
76 77 4.320057 GCTAATTTTGCTCGCTGCTGATAT 60.320 41.667 0.00 0.00 43.37 1.63
77 78 3.002656 GCTAATTTTGCTCGCTGCTGATA 59.997 43.478 0.00 0.00 43.37 2.15
78 79 2.223433 GCTAATTTTGCTCGCTGCTGAT 60.223 45.455 0.00 0.00 43.37 2.90
79 80 1.131126 GCTAATTTTGCTCGCTGCTGA 59.869 47.619 0.00 0.00 43.37 4.26
80 81 1.131883 AGCTAATTTTGCTCGCTGCTG 59.868 47.619 0.00 0.00 43.37 4.41
81 82 1.457346 AGCTAATTTTGCTCGCTGCT 58.543 45.000 0.00 0.00 43.37 4.24
82 83 3.405170 TTAGCTAATTTTGCTCGCTGC 57.595 42.857 8.62 0.00 41.46 5.25
83 84 4.260656 CGTTTTAGCTAATTTTGCTCGCTG 59.739 41.667 7.08 0.00 41.46 5.18
84 85 4.083484 ACGTTTTAGCTAATTTTGCTCGCT 60.083 37.500 7.08 0.00 41.46 4.93
85 86 4.156182 ACGTTTTAGCTAATTTTGCTCGC 58.844 39.130 7.08 0.00 41.46 5.03
86 87 7.948513 ATTACGTTTTAGCTAATTTTGCTCG 57.051 32.000 7.08 8.88 41.46 5.03
95 96 9.525409 GGAAGAGTCATATTACGTTTTAGCTAA 57.475 33.333 0.86 0.86 0.00 3.09
96 97 8.689061 TGGAAGAGTCATATTACGTTTTAGCTA 58.311 33.333 0.00 0.00 0.00 3.32
97 98 7.553334 TGGAAGAGTCATATTACGTTTTAGCT 58.447 34.615 0.00 0.00 0.00 3.32
98 99 7.705325 TCTGGAAGAGTCATATTACGTTTTAGC 59.295 37.037 0.00 0.00 38.67 3.09
116 117 4.401202 TGATGTTATAGCGTGTCTGGAAGA 59.599 41.667 0.00 0.00 43.69 2.87
117 118 4.682787 TGATGTTATAGCGTGTCTGGAAG 58.317 43.478 0.00 0.00 0.00 3.46
118 119 4.729227 TGATGTTATAGCGTGTCTGGAA 57.271 40.909 0.00 0.00 0.00 3.53
119 120 4.401202 TCTTGATGTTATAGCGTGTCTGGA 59.599 41.667 0.00 0.00 0.00 3.86
120 121 4.682787 TCTTGATGTTATAGCGTGTCTGG 58.317 43.478 0.00 0.00 0.00 3.86
121 122 7.357613 CGTTATCTTGATGTTATAGCGTGTCTG 60.358 40.741 0.00 0.00 0.00 3.51
122 123 6.637254 CGTTATCTTGATGTTATAGCGTGTCT 59.363 38.462 0.00 0.00 0.00 3.41
123 124 6.635641 TCGTTATCTTGATGTTATAGCGTGTC 59.364 38.462 0.00 0.00 33.34 3.67
124 125 6.500910 TCGTTATCTTGATGTTATAGCGTGT 58.499 36.000 0.00 0.00 33.34 4.49
125 126 6.856426 TCTCGTTATCTTGATGTTATAGCGTG 59.144 38.462 0.00 0.00 33.34 5.34
126 127 6.967135 TCTCGTTATCTTGATGTTATAGCGT 58.033 36.000 0.00 0.00 33.34 5.07
127 128 7.853377 TTCTCGTTATCTTGATGTTATAGCG 57.147 36.000 0.00 0.00 33.00 4.26
128 129 8.704234 CCTTTCTCGTTATCTTGATGTTATAGC 58.296 37.037 0.00 0.00 0.00 2.97
129 130 8.704234 GCCTTTCTCGTTATCTTGATGTTATAG 58.296 37.037 0.00 0.00 0.00 1.31
130 131 7.381408 CGCCTTTCTCGTTATCTTGATGTTATA 59.619 37.037 0.00 0.00 0.00 0.98
131 132 6.201044 CGCCTTTCTCGTTATCTTGATGTTAT 59.799 38.462 0.00 0.00 0.00 1.89
132 133 5.518847 CGCCTTTCTCGTTATCTTGATGTTA 59.481 40.000 0.00 0.00 0.00 2.41
133 134 4.330074 CGCCTTTCTCGTTATCTTGATGTT 59.670 41.667 0.00 0.00 0.00 2.71
134 135 3.865745 CGCCTTTCTCGTTATCTTGATGT 59.134 43.478 0.00 0.00 0.00 3.06
135 136 3.865745 ACGCCTTTCTCGTTATCTTGATG 59.134 43.478 0.00 0.00 36.72 3.07
136 137 4.124851 ACGCCTTTCTCGTTATCTTGAT 57.875 40.909 0.00 0.00 36.72 2.57
137 138 3.587797 ACGCCTTTCTCGTTATCTTGA 57.412 42.857 0.00 0.00 36.72 3.02
145 146 1.202604 TCTCCAAAACGCCTTTCTCGT 60.203 47.619 0.00 0.00 42.54 4.18
146 147 1.194772 GTCTCCAAAACGCCTTTCTCG 59.805 52.381 0.00 0.00 0.00 4.04
147 148 1.535896 GGTCTCCAAAACGCCTTTCTC 59.464 52.381 0.00 0.00 0.00 2.87
148 149 1.605753 GGTCTCCAAAACGCCTTTCT 58.394 50.000 0.00 0.00 0.00 2.52
149 150 0.237498 CGGTCTCCAAAACGCCTTTC 59.763 55.000 0.00 0.00 0.00 2.62
150 151 1.170290 CCGGTCTCCAAAACGCCTTT 61.170 55.000 0.00 0.00 0.00 3.11
151 152 1.599797 CCGGTCTCCAAAACGCCTT 60.600 57.895 0.00 0.00 0.00 4.35
152 153 2.032071 CCGGTCTCCAAAACGCCT 59.968 61.111 0.00 0.00 0.00 5.52
153 154 3.053896 CCCGGTCTCCAAAACGCC 61.054 66.667 0.00 0.00 0.00 5.68
154 155 3.733960 GCCCGGTCTCCAAAACGC 61.734 66.667 0.00 0.00 0.00 4.84
155 156 2.032071 AGCCCGGTCTCCAAAACG 59.968 61.111 0.00 0.00 0.00 3.60
156 157 3.982829 GAGCCCGGTCTCCAAAAC 58.017 61.111 0.00 0.00 0.00 2.43
162 163 3.866582 CCCATGGAGCCCGGTCTC 61.867 72.222 15.22 3.23 0.00 3.36
169 170 2.023760 ATAAAGGCCCCCATGGAGCC 62.024 60.000 29.12 29.12 44.16 4.70
170 171 0.105504 AATAAAGGCCCCCATGGAGC 60.106 55.000 15.22 15.79 35.39 4.70
171 172 2.477104 AAATAAAGGCCCCCATGGAG 57.523 50.000 15.22 0.00 35.39 3.86
172 173 2.843113 CAAAAATAAAGGCCCCCATGGA 59.157 45.455 15.22 0.00 35.39 3.41
173 174 2.843113 TCAAAAATAAAGGCCCCCATGG 59.157 45.455 4.14 4.14 37.09 3.66
174 175 4.566426 TTCAAAAATAAAGGCCCCCATG 57.434 40.909 0.00 0.00 0.00 3.66
175 176 5.590976 TTTTCAAAAATAAAGGCCCCCAT 57.409 34.783 0.00 0.00 0.00 4.00
176 177 5.388599 TTTTTCAAAAATAAAGGCCCCCA 57.611 34.783 0.00 0.00 0.00 4.96
238 239 9.903682 GTGTTACATCCTTACATACACGTATAT 57.096 33.333 0.00 0.00 0.00 0.86
239 240 8.901793 TGTGTTACATCCTTACATACACGTATA 58.098 33.333 0.00 0.00 37.73 1.47
240 241 7.703621 GTGTGTTACATCCTTACATACACGTAT 59.296 37.037 0.00 0.00 37.73 3.06
241 242 7.028962 GTGTGTTACATCCTTACATACACGTA 58.971 38.462 0.00 0.00 37.73 3.57
242 243 5.865552 GTGTGTTACATCCTTACATACACGT 59.134 40.000 0.00 0.00 37.73 4.49
243 244 5.865013 TGTGTGTTACATCCTTACATACACG 59.135 40.000 0.00 0.00 38.44 4.49
278 279 9.807649 GCAACTCAAGGTATTTCATTATGAATT 57.192 29.630 8.56 7.89 36.11 2.17
279 280 8.131100 CGCAACTCAAGGTATTTCATTATGAAT 58.869 33.333 8.56 2.44 36.11 2.57
280 281 7.335673 TCGCAACTCAAGGTATTTCATTATGAA 59.664 33.333 3.20 3.20 34.03 2.57
281 282 6.821160 TCGCAACTCAAGGTATTTCATTATGA 59.179 34.615 0.00 0.00 0.00 2.15
282 283 6.907212 GTCGCAACTCAAGGTATTTCATTATG 59.093 38.462 0.00 0.00 0.00 1.90
283 284 6.038271 GGTCGCAACTCAAGGTATTTCATTAT 59.962 38.462 0.00 0.00 0.00 1.28
284 285 5.353123 GGTCGCAACTCAAGGTATTTCATTA 59.647 40.000 0.00 0.00 0.00 1.90
285 286 4.156008 GGTCGCAACTCAAGGTATTTCATT 59.844 41.667 0.00 0.00 0.00 2.57
286 287 3.689649 GGTCGCAACTCAAGGTATTTCAT 59.310 43.478 0.00 0.00 0.00 2.57
287 288 3.071479 GGTCGCAACTCAAGGTATTTCA 58.929 45.455 0.00 0.00 0.00 2.69
288 289 3.335579 AGGTCGCAACTCAAGGTATTTC 58.664 45.455 0.00 0.00 0.00 2.17
289 290 3.418684 AGGTCGCAACTCAAGGTATTT 57.581 42.857 0.00 0.00 0.00 1.40
290 291 4.755266 ATAGGTCGCAACTCAAGGTATT 57.245 40.909 0.00 0.00 0.00 1.89
291 292 4.647853 TGTATAGGTCGCAACTCAAGGTAT 59.352 41.667 0.00 0.00 0.00 2.73
292 293 4.018490 TGTATAGGTCGCAACTCAAGGTA 58.982 43.478 0.00 0.00 0.00 3.08
293 294 2.829720 TGTATAGGTCGCAACTCAAGGT 59.170 45.455 0.00 0.00 0.00 3.50
294 295 3.520290 TGTATAGGTCGCAACTCAAGG 57.480 47.619 0.00 0.00 0.00 3.61
295 296 7.534085 TTATTTGTATAGGTCGCAACTCAAG 57.466 36.000 0.00 0.00 0.00 3.02
296 297 7.908827 TTTATTTGTATAGGTCGCAACTCAA 57.091 32.000 0.00 0.00 0.00 3.02
297 298 7.908827 TTTTATTTGTATAGGTCGCAACTCA 57.091 32.000 0.00 0.00 0.00 3.41
319 320 6.573094 GCTCTAGGCCATGAATTTGTCTTTTT 60.573 38.462 5.01 0.00 34.27 1.94
320 321 5.105595 GCTCTAGGCCATGAATTTGTCTTTT 60.106 40.000 5.01 0.00 34.27 2.27
321 322 4.400567 GCTCTAGGCCATGAATTTGTCTTT 59.599 41.667 5.01 0.00 34.27 2.52
322 323 3.950395 GCTCTAGGCCATGAATTTGTCTT 59.050 43.478 5.01 0.00 34.27 3.01
323 324 3.054139 TGCTCTAGGCCATGAATTTGTCT 60.054 43.478 5.01 0.00 40.92 3.41
324 325 3.282021 TGCTCTAGGCCATGAATTTGTC 58.718 45.455 5.01 0.00 40.92 3.18
325 326 3.285484 CTGCTCTAGGCCATGAATTTGT 58.715 45.455 5.01 0.00 40.92 2.83
326 327 2.034305 GCTGCTCTAGGCCATGAATTTG 59.966 50.000 5.01 0.00 40.92 2.32
327 328 2.305009 GCTGCTCTAGGCCATGAATTT 58.695 47.619 5.01 0.00 40.92 1.82
328 329 1.478288 GGCTGCTCTAGGCCATGAATT 60.478 52.381 5.01 0.00 46.84 2.17
329 330 0.110104 GGCTGCTCTAGGCCATGAAT 59.890 55.000 5.01 0.00 46.84 2.57
330 331 1.528824 GGCTGCTCTAGGCCATGAA 59.471 57.895 5.01 0.00 46.84 2.57
331 332 3.234349 GGCTGCTCTAGGCCATGA 58.766 61.111 5.01 0.71 46.84 3.07
337 338 3.272574 TCAAAATGAGGCTGCTCTAGG 57.727 47.619 0.00 0.00 0.00 3.02
338 339 8.789825 AATATATCAAAATGAGGCTGCTCTAG 57.210 34.615 0.00 0.00 0.00 2.43
339 340 9.578576 AAAATATATCAAAATGAGGCTGCTCTA 57.421 29.630 0.00 0.00 0.00 2.43
340 341 8.358148 CAAAATATATCAAAATGAGGCTGCTCT 58.642 33.333 0.00 0.00 0.00 4.09
341 342 8.355169 TCAAAATATATCAAAATGAGGCTGCTC 58.645 33.333 0.00 0.00 0.00 4.26
342 343 8.241497 TCAAAATATATCAAAATGAGGCTGCT 57.759 30.769 0.00 0.00 0.00 4.24
343 344 8.758715 GTTCAAAATATATCAAAATGAGGCTGC 58.241 33.333 0.00 0.00 0.00 5.25
362 363 9.429359 ACATGTGTGTAAATTTTCAGTTCAAAA 57.571 25.926 0.00 0.00 36.63 2.44
363 364 8.867935 CACATGTGTGTAAATTTTCAGTTCAAA 58.132 29.630 18.03 0.00 40.96 2.69
364 365 8.404889 CACATGTGTGTAAATTTTCAGTTCAA 57.595 30.769 18.03 0.00 40.96 2.69
365 366 7.984002 CACATGTGTGTAAATTTTCAGTTCA 57.016 32.000 18.03 0.00 40.96 3.18
380 381 6.126914 CATGAAGGCATAACACACATGTGTG 61.127 44.000 43.01 43.01 44.88 3.82
381 382 4.082625 CATGAAGGCATAACACACATGTGT 60.083 41.667 25.76 25.76 46.35 3.72
382 383 4.082625 ACATGAAGGCATAACACACATGTG 60.083 41.667 24.25 24.25 42.90 3.21
383 384 4.081406 ACATGAAGGCATAACACACATGT 58.919 39.130 0.00 0.00 40.84 3.21
384 385 4.707030 ACATGAAGGCATAACACACATG 57.293 40.909 0.00 0.00 39.27 3.21
385 386 5.252547 TGTACATGAAGGCATAACACACAT 58.747 37.500 0.00 0.00 32.27 3.21
386 387 4.646572 TGTACATGAAGGCATAACACACA 58.353 39.130 0.00 0.00 32.27 3.72
387 388 5.586243 AGATGTACATGAAGGCATAACACAC 59.414 40.000 14.43 0.00 34.40 3.82
388 389 5.585844 CAGATGTACATGAAGGCATAACACA 59.414 40.000 14.43 0.00 34.40 3.72
389 390 5.586243 ACAGATGTACATGAAGGCATAACAC 59.414 40.000 14.43 0.00 34.40 3.32
390 391 5.744171 ACAGATGTACATGAAGGCATAACA 58.256 37.500 14.43 0.00 35.39 2.41
391 392 7.969536 ATACAGATGTACATGAAGGCATAAC 57.030 36.000 14.43 0.00 32.72 1.89
392 393 8.978874 AAATACAGATGTACATGAAGGCATAA 57.021 30.769 14.43 0.00 32.72 1.90
393 394 8.978874 AAAATACAGATGTACATGAAGGCATA 57.021 30.769 14.43 0.00 32.72 3.14
394 395 7.886629 AAAATACAGATGTACATGAAGGCAT 57.113 32.000 14.43 0.00 32.72 4.40
395 396 7.701539 AAAAATACAGATGTACATGAAGGCA 57.298 32.000 14.43 0.00 32.72 4.75
466 467 5.767277 ATGAGGCCTCCAAATTCAAATTT 57.233 34.783 29.95 0.00 39.07 1.82
467 468 5.493809 CAATGAGGCCTCCAAATTCAAATT 58.506 37.500 29.95 15.80 0.00 1.82
468 469 4.080751 CCAATGAGGCCTCCAAATTCAAAT 60.081 41.667 29.95 10.40 0.00 2.32
469 470 3.261390 CCAATGAGGCCTCCAAATTCAAA 59.739 43.478 29.95 8.27 0.00 2.69
470 471 2.833338 CCAATGAGGCCTCCAAATTCAA 59.167 45.455 29.95 9.07 0.00 2.69
471 472 2.042842 TCCAATGAGGCCTCCAAATTCA 59.957 45.455 29.95 10.85 37.29 2.57
472 473 2.692041 CTCCAATGAGGCCTCCAAATTC 59.308 50.000 29.95 4.45 37.29 2.17
473 474 2.743553 CTCCAATGAGGCCTCCAAATT 58.256 47.619 29.95 19.39 37.29 1.82
474 475 2.449137 CTCCAATGAGGCCTCCAAAT 57.551 50.000 29.95 14.27 37.29 2.32
475 476 3.985410 CTCCAATGAGGCCTCCAAA 57.015 52.632 29.95 12.34 37.29 3.28
484 485 1.227497 GAGCTCGGCCTCCAATGAG 60.227 63.158 0.00 0.00 38.42 2.90
485 486 2.903357 GAGCTCGGCCTCCAATGA 59.097 61.111 0.00 0.00 0.00 2.57
491 492 1.746991 CCTTTTGGAGCTCGGCCTC 60.747 63.158 7.83 0.00 44.07 4.70
492 493 2.352805 CCTTTTGGAGCTCGGCCT 59.647 61.111 7.83 0.00 44.07 5.19
493 494 2.751837 CCCTTTTGGAGCTCGGCC 60.752 66.667 7.83 0.00 44.07 6.13
494 495 1.179174 AAACCCTTTTGGAGCTCGGC 61.179 55.000 7.83 0.00 44.07 5.54
495 496 0.881796 GAAACCCTTTTGGAGCTCGG 59.118 55.000 7.83 4.50 44.07 4.63
496 497 0.881796 GGAAACCCTTTTGGAGCTCG 59.118 55.000 7.83 0.00 44.07 5.03
497 498 0.881796 CGGAAACCCTTTTGGAGCTC 59.118 55.000 4.71 4.71 44.07 4.09
498 499 1.179174 GCGGAAACCCTTTTGGAGCT 61.179 55.000 0.00 0.00 44.07 4.09
499 500 1.289066 GCGGAAACCCTTTTGGAGC 59.711 57.895 0.00 0.00 44.07 4.70
500 501 0.887387 TCGCGGAAACCCTTTTGGAG 60.887 55.000 6.13 0.00 44.07 3.86
501 502 0.887387 CTCGCGGAAACCCTTTTGGA 60.887 55.000 6.13 0.00 44.07 3.53
502 503 0.887387 TCTCGCGGAAACCCTTTTGG 60.887 55.000 6.13 0.00 41.37 3.28
503 504 1.165270 ATCTCGCGGAAACCCTTTTG 58.835 50.000 6.13 0.00 0.00 2.44
504 505 2.745821 GTTATCTCGCGGAAACCCTTTT 59.254 45.455 6.13 0.00 0.00 2.27
505 506 2.289819 TGTTATCTCGCGGAAACCCTTT 60.290 45.455 6.13 0.00 0.00 3.11
506 507 1.276989 TGTTATCTCGCGGAAACCCTT 59.723 47.619 6.13 0.00 0.00 3.95
507 508 0.899720 TGTTATCTCGCGGAAACCCT 59.100 50.000 6.13 0.00 0.00 4.34
508 509 1.004595 GTGTTATCTCGCGGAAACCC 58.995 55.000 6.13 0.00 0.00 4.11
509 510 0.643820 CGTGTTATCTCGCGGAAACC 59.356 55.000 6.13 0.28 37.62 3.27
510 511 0.024619 GCGTGTTATCTCGCGGAAAC 59.975 55.000 6.13 6.56 44.23 2.78
511 512 2.365823 GCGTGTTATCTCGCGGAAA 58.634 52.632 6.13 0.00 44.23 3.13
512 513 4.082192 GCGTGTTATCTCGCGGAA 57.918 55.556 6.13 0.00 44.23 4.30
526 527 6.865726 TGCAAATATCAACAACAAAATAGCGT 59.134 30.769 0.00 0.00 0.00 5.07
584 585 7.998383 TCTTATATCAAAGTACATGGTGCCAAT 59.002 33.333 0.00 0.00 0.00 3.16
613 614 6.653020 TGCCTGTATACAATTTGACTGAGAT 58.347 36.000 7.06 0.00 0.00 2.75
635 636 6.312672 ACATTACAACAACAAAAAGGTTCTGC 59.687 34.615 0.00 0.00 0.00 4.26
650 651 8.129840 ACAACGCTGTTTAATAACATTACAACA 58.870 29.630 0.00 0.00 43.02 3.33
653 654 7.173562 AGGACAACGCTGTTTAATAACATTACA 59.826 33.333 0.00 0.00 43.02 2.41
655 656 7.675962 AGGACAACGCTGTTTAATAACATTA 57.324 32.000 0.00 0.00 43.02 1.90
656 657 6.569179 AGGACAACGCTGTTTAATAACATT 57.431 33.333 0.00 0.00 43.02 2.71
911 958 1.003347 GGGAGGGTAGGGAGAGGGTA 61.003 65.000 0.00 0.00 0.00 3.69
1143 1195 1.001020 GGTGCCCATGGTGATGTGA 60.001 57.895 11.73 0.00 0.00 3.58
1215 1270 2.124193 TTGTGTGGCTGCTGCTGT 60.124 55.556 15.64 0.00 39.59 4.40
1526 1602 3.785887 AGGCAGGAGTGGGTATGAATAAA 59.214 43.478 0.00 0.00 0.00 1.40
1535 1611 1.151899 TGGTAAGGCAGGAGTGGGT 60.152 57.895 0.00 0.00 0.00 4.51
1545 1624 0.889186 CTGGTGGTGTGTGGTAAGGC 60.889 60.000 0.00 0.00 0.00 4.35
1693 1775 3.475575 GAGGAGGATCAAAGGAATCAGC 58.524 50.000 0.00 0.00 36.25 4.26
1697 1779 2.482494 ACGGAGGAGGATCAAAGGAAT 58.518 47.619 0.00 0.00 36.25 3.01
1740 1828 2.372837 GGAGTAGACCGAGTAGGAGGAT 59.627 54.545 0.00 0.00 45.00 3.24
1839 1927 0.041684 TCTCCTCCTCATCCAGCACA 59.958 55.000 0.00 0.00 0.00 4.57
1893 1981 1.719709 CGTGTCGCTCCACTCGATA 59.280 57.895 0.00 0.00 38.29 2.92
2184 2308 1.661341 GACATGTCATGAGAGCCACC 58.339 55.000 21.07 0.00 0.00 4.61
2265 2389 4.824479 TCCATTGATCACACTTCAGCTA 57.176 40.909 0.00 0.00 0.00 3.32
2271 2395 5.337009 GGCAATTCTTCCATTGATCACACTT 60.337 40.000 0.00 0.00 36.39 3.16
2280 2404 3.094572 AGAGTGGGCAATTCTTCCATTG 58.905 45.455 0.00 0.00 37.23 2.82
2340 2464 5.970023 GCAGTAAAGTAGTAGTACATGGTCG 59.030 44.000 10.33 0.00 0.00 4.79
2465 2596 3.030415 CATGGCTCCATGCATGCTA 57.970 52.632 21.69 8.63 45.71 3.49
2640 2771 9.783256 GTAGACACAAGAACTTAAACATGTTTT 57.217 29.630 27.66 10.94 34.23 2.43
2758 2922 3.440173 TGGATCTCAAAGAAATTGACGGC 59.560 43.478 0.00 0.00 43.08 5.68
2803 2967 5.209818 CCTAACGGGCTAAATGATGTCTA 57.790 43.478 0.00 0.00 0.00 2.59
2845 3010 5.026121 AGAGTGGTCATGATGTTCTAAGGA 58.974 41.667 0.00 0.00 0.00 3.36
2881 3046 5.588648 AGACAAATTTCGGAGTTGACAAGAA 59.411 36.000 6.84 0.00 36.83 2.52
2882 3047 5.007626 CAGACAAATTTCGGAGTTGACAAGA 59.992 40.000 6.84 0.00 36.83 3.02
2921 3086 1.922135 GCGAATTCTTTGCCGGCTCA 61.922 55.000 29.70 11.92 33.83 4.26
2925 3090 1.154035 GGTGCGAATTCTTTGCCGG 60.154 57.895 0.00 0.00 39.39 6.13
2927 3092 1.215382 GGGGTGCGAATTCTTTGCC 59.785 57.895 3.52 0.76 39.39 4.52
2929 3094 0.811281 GAGGGGGTGCGAATTCTTTG 59.189 55.000 3.52 0.00 0.00 2.77
2935 3100 3.090532 GGGAGAGGGGGTGCGAAT 61.091 66.667 0.00 0.00 0.00 3.34
2945 3110 1.935931 AATTGGGGTGGGGGAGAGG 60.936 63.158 0.00 0.00 0.00 3.69
2947 3112 1.077298 AACAATTGGGGTGGGGGAGA 61.077 55.000 10.83 0.00 0.00 3.71
2948 3113 0.178906 AAACAATTGGGGTGGGGGAG 60.179 55.000 10.83 0.00 0.00 4.30
2949 3114 0.269173 AAAACAATTGGGGTGGGGGA 59.731 50.000 10.83 0.00 0.00 4.81
2950 3115 0.399833 CAAAACAATTGGGGTGGGGG 59.600 55.000 10.83 0.00 0.00 5.40
2951 3116 0.250684 GCAAAACAATTGGGGTGGGG 60.251 55.000 10.83 0.00 0.00 4.96
2952 3117 0.471617 TGCAAAACAATTGGGGTGGG 59.528 50.000 10.83 0.00 0.00 4.61
2953 3118 2.152830 CATGCAAAACAATTGGGGTGG 58.847 47.619 10.83 0.00 0.00 4.61
2954 3119 1.536331 GCATGCAAAACAATTGGGGTG 59.464 47.619 14.21 5.35 0.00 4.61
2955 3120 1.545204 GGCATGCAAAACAATTGGGGT 60.545 47.619 21.36 0.00 0.00 4.95
2956 3121 1.166989 GGCATGCAAAACAATTGGGG 58.833 50.000 21.36 0.00 0.00 4.96
2957 3122 1.893544 TGGCATGCAAAACAATTGGG 58.106 45.000 21.36 0.00 0.00 4.12
2958 3123 3.479505 CATGGCATGCAAAACAATTGG 57.520 42.857 21.36 0.00 0.00 3.16
3004 3169 1.004440 GCTGGTCAGAGGTGTGGAC 60.004 63.158 1.65 0.00 0.00 4.02
3010 3175 1.056700 AGTTGTGGCTGGTCAGAGGT 61.057 55.000 1.65 0.00 0.00 3.85
3059 3224 0.788391 CTCTAAAACGACCACGGTGC 59.212 55.000 1.68 0.00 44.46 5.01
3061 3226 3.243975 ACATTCTCTAAAACGACCACGGT 60.244 43.478 0.00 0.00 44.46 4.83
3073 3238 5.209818 AGAACCACGACAACATTCTCTAA 57.790 39.130 0.00 0.00 0.00 2.10
3078 3243 4.989168 AGTCTTAGAACCACGACAACATTC 59.011 41.667 0.00 0.00 0.00 2.67
3079 3244 4.750098 CAGTCTTAGAACCACGACAACATT 59.250 41.667 0.00 0.00 0.00 2.71
3080 3245 4.038763 TCAGTCTTAGAACCACGACAACAT 59.961 41.667 0.00 0.00 0.00 2.71
3081 3246 3.382227 TCAGTCTTAGAACCACGACAACA 59.618 43.478 0.00 0.00 0.00 3.33
3082 3247 3.734735 GTCAGTCTTAGAACCACGACAAC 59.265 47.826 0.00 0.00 0.00 3.32
3083 3248 3.382227 TGTCAGTCTTAGAACCACGACAA 59.618 43.478 0.00 0.00 0.00 3.18
3084 3249 2.953648 TGTCAGTCTTAGAACCACGACA 59.046 45.455 0.00 0.00 0.00 4.35
3085 3250 3.004524 ACTGTCAGTCTTAGAACCACGAC 59.995 47.826 0.00 0.00 0.00 4.34
3086 3251 3.220110 ACTGTCAGTCTTAGAACCACGA 58.780 45.455 0.00 0.00 0.00 4.35
3087 3252 3.644884 ACTGTCAGTCTTAGAACCACG 57.355 47.619 0.00 0.00 0.00 4.94
3088 3253 5.961396 TCTACTGTCAGTCTTAGAACCAC 57.039 43.478 9.26 0.00 0.00 4.16
3089 3254 6.015350 CCTTTCTACTGTCAGTCTTAGAACCA 60.015 42.308 9.26 0.00 0.00 3.67
3090 3255 6.391537 CCTTTCTACTGTCAGTCTTAGAACC 58.608 44.000 9.26 0.00 0.00 3.62
3091 3256 6.391537 CCCTTTCTACTGTCAGTCTTAGAAC 58.608 44.000 9.26 0.00 0.00 3.01
3092 3257 5.480772 CCCCTTTCTACTGTCAGTCTTAGAA 59.519 44.000 9.26 10.43 0.00 2.10
3093 3258 5.017490 CCCCTTTCTACTGTCAGTCTTAGA 58.983 45.833 9.26 4.23 0.00 2.10
3094 3259 4.160626 CCCCCTTTCTACTGTCAGTCTTAG 59.839 50.000 9.26 1.56 0.00 2.18
3095 3260 4.094476 CCCCCTTTCTACTGTCAGTCTTA 58.906 47.826 9.26 0.00 0.00 2.10
3096 3261 2.907042 CCCCCTTTCTACTGTCAGTCTT 59.093 50.000 9.26 0.00 0.00 3.01
3097 3262 2.541466 CCCCCTTTCTACTGTCAGTCT 58.459 52.381 9.26 0.00 0.00 3.24
3114 3279 0.836830 GCCTCTCCATACCTACCCCC 60.837 65.000 0.00 0.00 0.00 5.40
3115 3280 0.105142 TGCCTCTCCATACCTACCCC 60.105 60.000 0.00 0.00 0.00 4.95
3116 3281 1.694696 CTTGCCTCTCCATACCTACCC 59.305 57.143 0.00 0.00 0.00 3.69
3117 3282 2.365941 GTCTTGCCTCTCCATACCTACC 59.634 54.545 0.00 0.00 0.00 3.18
3118 3283 2.365941 GGTCTTGCCTCTCCATACCTAC 59.634 54.545 0.00 0.00 0.00 3.18
3119 3284 2.247635 AGGTCTTGCCTCTCCATACCTA 59.752 50.000 0.00 0.00 46.96 3.08
3120 3285 1.008938 AGGTCTTGCCTCTCCATACCT 59.991 52.381 0.00 0.00 46.96 3.08
3121 3286 1.501582 AGGTCTTGCCTCTCCATACC 58.498 55.000 0.00 0.00 46.96 2.73
3131 3296 0.543749 ACCATAGCTGAGGTCTTGCC 59.456 55.000 6.12 0.00 30.79 4.52
3132 3297 1.208052 TCACCATAGCTGAGGTCTTGC 59.792 52.381 8.78 0.00 35.52 4.01
3133 3298 3.529533 CTTCACCATAGCTGAGGTCTTG 58.470 50.000 8.78 0.03 35.52 3.02
3134 3299 2.503356 CCTTCACCATAGCTGAGGTCTT 59.497 50.000 8.78 0.00 35.52 3.01
3135 3300 2.114616 CCTTCACCATAGCTGAGGTCT 58.885 52.381 8.78 0.00 35.52 3.85
3136 3301 1.834263 ACCTTCACCATAGCTGAGGTC 59.166 52.381 8.78 0.00 35.52 3.85
3137 3302 1.556911 CACCTTCACCATAGCTGAGGT 59.443 52.381 6.12 6.12 39.10 3.85
3138 3303 1.556911 ACACCTTCACCATAGCTGAGG 59.443 52.381 0.00 0.00 0.00 3.86
3139 3304 3.195610 TGTACACCTTCACCATAGCTGAG 59.804 47.826 0.00 0.00 0.00 3.35
3140 3305 3.056107 GTGTACACCTTCACCATAGCTGA 60.056 47.826 15.42 0.00 0.00 4.26
3141 3306 3.262420 GTGTACACCTTCACCATAGCTG 58.738 50.000 15.42 0.00 0.00 4.24
3142 3307 2.903784 TGTGTACACCTTCACCATAGCT 59.096 45.455 22.91 0.00 34.14 3.32
3143 3308 3.000727 GTGTGTACACCTTCACCATAGC 58.999 50.000 22.91 0.00 40.85 2.97
3144 3309 4.245660 CTGTGTGTACACCTTCACCATAG 58.754 47.826 22.91 6.64 45.88 2.23
3145 3310 3.007506 CCTGTGTGTACACCTTCACCATA 59.992 47.826 22.91 0.00 45.88 2.74
3146 3311 2.224523 CCTGTGTGTACACCTTCACCAT 60.225 50.000 22.91 0.00 45.88 3.55
3147 3312 1.140052 CCTGTGTGTACACCTTCACCA 59.860 52.381 22.91 8.94 45.88 4.17
3148 3313 1.414919 TCCTGTGTGTACACCTTCACC 59.585 52.381 22.91 5.00 45.88 4.02
3149 3314 2.102588 ACTCCTGTGTGTACACCTTCAC 59.897 50.000 22.91 14.49 45.88 3.18
3150 3315 2.394632 ACTCCTGTGTGTACACCTTCA 58.605 47.619 22.91 16.86 45.88 3.02
3151 3316 3.470645 AACTCCTGTGTGTACACCTTC 57.529 47.619 22.91 13.46 45.88 3.46
3152 3317 3.243636 CGTAACTCCTGTGTGTACACCTT 60.244 47.826 22.91 7.19 45.88 3.50
3153 3318 2.295349 CGTAACTCCTGTGTGTACACCT 59.705 50.000 22.91 1.14 45.88 4.00
3154 3319 2.294233 TCGTAACTCCTGTGTGTACACC 59.706 50.000 22.91 14.38 45.88 4.16
3155 3320 3.004106 ACTCGTAACTCCTGTGTGTACAC 59.996 47.826 19.36 19.36 46.59 2.90
3156 3321 3.216800 ACTCGTAACTCCTGTGTGTACA 58.783 45.455 0.00 0.00 35.08 2.90
3157 3322 3.911661 ACTCGTAACTCCTGTGTGTAC 57.088 47.619 0.00 0.00 0.00 2.90
3158 3323 3.884693 TGAACTCGTAACTCCTGTGTGTA 59.115 43.478 0.00 0.00 0.00 2.90
3159 3324 2.691526 TGAACTCGTAACTCCTGTGTGT 59.308 45.455 0.00 0.00 0.00 3.72
3160 3325 3.309388 CTGAACTCGTAACTCCTGTGTG 58.691 50.000 0.00 0.00 0.00 3.82
3161 3326 2.296471 CCTGAACTCGTAACTCCTGTGT 59.704 50.000 0.00 0.00 0.00 3.72
3162 3327 2.927014 GCCTGAACTCGTAACTCCTGTG 60.927 54.545 0.00 0.00 0.00 3.66
3163 3328 1.272769 GCCTGAACTCGTAACTCCTGT 59.727 52.381 0.00 0.00 0.00 4.00
3164 3329 1.404315 GGCCTGAACTCGTAACTCCTG 60.404 57.143 0.00 0.00 0.00 3.86
3165 3330 0.896226 GGCCTGAACTCGTAACTCCT 59.104 55.000 0.00 0.00 0.00 3.69
3166 3331 0.108281 GGGCCTGAACTCGTAACTCC 60.108 60.000 0.84 0.00 0.00 3.85
3167 3332 0.896226 AGGGCCTGAACTCGTAACTC 59.104 55.000 4.50 0.00 0.00 3.01
3168 3333 1.275573 GAAGGGCCTGAACTCGTAACT 59.724 52.381 6.92 0.00 0.00 2.24
3169 3334 1.723220 GAAGGGCCTGAACTCGTAAC 58.277 55.000 6.92 0.00 0.00 2.50
3170 3335 0.245539 CGAAGGGCCTGAACTCGTAA 59.754 55.000 6.92 0.00 0.00 3.18
3171 3336 1.888018 CGAAGGGCCTGAACTCGTA 59.112 57.895 6.92 0.00 0.00 3.43
3172 3337 2.657237 CGAAGGGCCTGAACTCGT 59.343 61.111 6.92 0.00 0.00 4.18
3173 3338 2.815647 GCGAAGGGCCTGAACTCG 60.816 66.667 18.63 18.63 34.80 4.18
3174 3339 2.815647 CGCGAAGGGCCTGAACTC 60.816 66.667 6.92 0.00 38.94 3.01
3175 3340 4.394712 CCGCGAAGGGCCTGAACT 62.395 66.667 6.92 0.00 40.02 3.01
3176 3341 4.388499 TCCGCGAAGGGCCTGAAC 62.388 66.667 6.92 0.58 41.52 3.18
3177 3342 4.082523 CTCCGCGAAGGGCCTGAA 62.083 66.667 6.92 0.00 41.52 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.