Multiple sequence alignment - TraesCS5B01G512500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G512500 chr5B 100.000 4540 0 0 1 4540 677672155 677676694 0.000000e+00 8384.0
1 TraesCS5B01G512500 chr5B 96.958 263 8 0 636 898 147458702 147458964 4.170000e-120 442.0
2 TraesCS5B01G512500 chr5B 95.865 266 10 1 639 904 670793302 670793038 3.250000e-116 429.0
3 TraesCS5B01G512500 chr5B 81.553 103 16 3 2320 2421 88352502 88352602 1.050000e-11 82.4
4 TraesCS5B01G512500 chr4A 93.571 2520 111 18 2054 4540 634419220 634421721 0.000000e+00 3709.0
5 TraesCS5B01G512500 chr4A 93.413 2520 115 18 2054 4540 634451489 634453990 0.000000e+00 3687.0
6 TraesCS5B01G512500 chr4A 93.258 1157 49 9 900 2050 634418041 634419174 0.000000e+00 1677.0
7 TraesCS5B01G512500 chr4A 92.999 1157 52 9 900 2050 634450310 634451443 0.000000e+00 1661.0
8 TraesCS5B01G512500 chr4A 96.935 261 8 0 638 898 645738939 645739199 5.390000e-119 438.0
9 TraesCS5B01G512500 chr4A 90.071 141 11 2 500 640 634450082 634450219 3.610000e-41 180.0
10 TraesCS5B01G512500 chr5D 93.947 2478 106 14 2054 4507 536757367 536754910 0.000000e+00 3705.0
11 TraesCS5B01G512500 chr5D 93.271 1174 42 15 896 2053 536758562 536757410 0.000000e+00 1696.0
12 TraesCS5B01G512500 chr5D 75.684 658 141 15 1122 1771 511941291 511941937 1.230000e-80 311.0
13 TraesCS5B01G512500 chr5D 90.323 186 9 5 236 413 536758912 536758728 7.590000e-58 235.0
14 TraesCS5B01G512500 chr5D 86.316 95 11 2 2465 2557 437289966 437290060 8.040000e-18 102.0
15 TraesCS5B01G512500 chr5D 95.238 42 2 0 4488 4529 74742114 74742073 2.930000e-07 67.6
16 TraesCS5B01G512500 chr5D 95.238 42 2 0 4488 4529 460079558 460079599 2.930000e-07 67.6
17 TraesCS5B01G512500 chr4B 97.308 260 7 0 639 898 652280705 652280964 4.170000e-120 442.0
18 TraesCS5B01G512500 chr4B 86.364 66 7 2 4466 4529 245320122 245320057 2.270000e-08 71.3
19 TraesCS5B01G512500 chr7B 96.947 262 8 0 638 899 123442144 123441883 1.500000e-119 440.0
20 TraesCS5B01G512500 chr7B 73.391 575 142 11 2961 3531 704114029 704114596 2.140000e-48 204.0
21 TraesCS5B01G512500 chr7A 96.935 261 8 0 638 898 233305544 233305284 5.390000e-119 438.0
22 TraesCS5B01G512500 chr7A 100.000 28 0 0 3878 3905 45063728 45063701 8.000000e-03 52.8
23 TraesCS5B01G512500 chr1A 96.935 261 8 0 638 898 4700256 4700516 5.390000e-119 438.0
24 TraesCS5B01G512500 chr1A 82.514 183 29 3 3919 4099 505343287 505343468 1.690000e-34 158.0
25 TraesCS5B01G512500 chr2B 96.591 264 8 1 639 902 57025349 57025087 1.940000e-118 436.0
26 TraesCS5B01G512500 chr2B 96.923 260 8 0 639 898 147482089 147482348 1.940000e-118 436.0
27 TraesCS5B01G512500 chr2B 72.494 858 202 25 1092 1932 7086484 7087324 3.510000e-61 246.0
28 TraesCS5B01G512500 chr2B 72.145 858 205 26 1092 1932 7160733 7161573 3.530000e-56 230.0
29 TraesCS5B01G512500 chr2B 96.875 32 0 1 3878 3909 592765301 592765271 8.000000e-03 52.8
30 TraesCS5B01G512500 chr5A 75.091 823 175 23 1122 1932 640273840 640274644 1.550000e-94 357.0
31 TraesCS5B01G512500 chr5A 78.601 243 48 4 2317 2558 3378416 3378655 1.690000e-34 158.0
32 TraesCS5B01G512500 chr3B 74.636 686 146 17 1093 1767 704134927 704135595 1.240000e-70 278.0
33 TraesCS5B01G512500 chr3B 83.482 224 33 4 2314 2534 752042491 752042269 5.950000e-49 206.0
34 TraesCS5B01G512500 chr3B 82.292 96 14 3 2320 2414 581090286 581090379 3.760000e-11 80.5
35 TraesCS5B01G512500 chr3A 76.762 525 101 10 1093 1611 667219095 667219604 1.610000e-69 274.0
36 TraesCS5B01G512500 chr3A 78.987 395 77 4 1099 1490 667262170 667262561 9.680000e-67 265.0
37 TraesCS5B01G512500 chrUn 72.372 818 196 23 1123 1931 329115388 329114592 9.820000e-57 231.0
38 TraesCS5B01G512500 chrUn 84.848 66 8 2 4466 4529 66175114 66175179 1.050000e-06 65.8
39 TraesCS5B01G512500 chr1B 89.655 174 18 0 59 232 207863027 207863200 5.910000e-54 222.0
40 TraesCS5B01G512500 chr1B 84.247 146 21 2 2323 2467 14498263 14498407 1.700000e-29 141.0
41 TraesCS5B01G512500 chr1B 86.239 109 15 0 59 167 207853648 207853756 7.980000e-23 119.0
42 TraesCS5B01G512500 chr1B 92.958 71 5 0 162 232 207855397 207855467 2.230000e-18 104.0
43 TraesCS5B01G512500 chr1D 88.506 174 20 0 59 232 357732806 357732633 1.280000e-50 211.0
44 TraesCS5B01G512500 chr1D 86.441 177 23 1 57 232 357714697 357714521 4.630000e-45 193.0
45 TraesCS5B01G512500 chr1D 81.319 182 32 2 4238 4418 409435143 409435323 3.660000e-31 147.0
46 TraesCS5B01G512500 chr2D 86.986 146 18 1 87 232 434524817 434524673 3.630000e-36 163.0
47 TraesCS5B01G512500 chr2D 86.301 146 19 1 87 232 434532622 434532478 1.690000e-34 158.0
48 TraesCS5B01G512500 chr6D 86.301 146 19 1 87 232 90315272 90315416 1.690000e-34 158.0
49 TraesCS5B01G512500 chr6D 100.000 28 0 0 3878 3905 38435506 38435479 8.000000e-03 52.8
50 TraesCS5B01G512500 chr6D 100.000 28 0 0 3878 3905 38448770 38448743 8.000000e-03 52.8
51 TraesCS5B01G512500 chr6A 78.173 197 34 7 4338 4529 473352802 473352994 2.870000e-22 117.0
52 TraesCS5B01G512500 chr6A 96.875 32 0 1 3878 3909 607397017 607396987 8.000000e-03 52.8
53 TraesCS5B01G512500 chr4D 82.759 87 8 6 2338 2421 372188764 372188846 2.270000e-08 71.3
54 TraesCS5B01G512500 chr6B 95.238 42 2 0 4488 4529 433557411 433557370 2.930000e-07 67.6
55 TraesCS5B01G512500 chr2A 95.238 42 2 0 4488 4529 333892651 333892610 2.930000e-07 67.6
56 TraesCS5B01G512500 chr3D 96.970 33 1 0 3939 3971 312861941 312861909 6.340000e-04 56.5
57 TraesCS5B01G512500 chr7D 100.000 29 0 0 3943 3971 100766060 100766032 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G512500 chr5B 677672155 677676694 4539 False 8384.000000 8384 100.000000 1 4540 1 chr5B.!!$F3 4539
1 TraesCS5B01G512500 chr4A 634418041 634421721 3680 False 2693.000000 3709 93.414500 900 4540 2 chr4A.!!$F2 3640
2 TraesCS5B01G512500 chr4A 634450082 634453990 3908 False 1842.666667 3687 92.161000 500 4540 3 chr4A.!!$F3 4040
3 TraesCS5B01G512500 chr5D 536754910 536758912 4002 True 1878.666667 3705 92.513667 236 4507 3 chr5D.!!$R2 4271
4 TraesCS5B01G512500 chr5D 511941291 511941937 646 False 311.000000 311 75.684000 1122 1771 1 chr5D.!!$F3 649
5 TraesCS5B01G512500 chr7B 704114029 704114596 567 False 204.000000 204 73.391000 2961 3531 1 chr7B.!!$F1 570
6 TraesCS5B01G512500 chr2B 7086484 7087324 840 False 246.000000 246 72.494000 1092 1932 1 chr2B.!!$F1 840
7 TraesCS5B01G512500 chr2B 7160733 7161573 840 False 230.000000 230 72.145000 1092 1932 1 chr2B.!!$F2 840
8 TraesCS5B01G512500 chr5A 640273840 640274644 804 False 357.000000 357 75.091000 1122 1932 1 chr5A.!!$F2 810
9 TraesCS5B01G512500 chr3B 704134927 704135595 668 False 278.000000 278 74.636000 1093 1767 1 chr3B.!!$F2 674
10 TraesCS5B01G512500 chr3A 667219095 667219604 509 False 274.000000 274 76.762000 1093 1611 1 chr3A.!!$F1 518
11 TraesCS5B01G512500 chrUn 329114592 329115388 796 True 231.000000 231 72.372000 1123 1931 1 chrUn.!!$R1 808

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
120 121 0.871722 CGTGAGAAAATCCGGCAACA 59.128 50.000 0.00 0.0 0.00 3.33 F
974 1074 1.064758 AGGCAGTTTGGTTGACAGACA 60.065 47.619 0.00 0.0 36.69 3.41 F
2040 2171 0.685097 GTGTTGCACACCCTCCTCTA 59.315 55.000 7.86 0.0 43.05 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1431 1538 0.321475 GCTTGGCACTCAGAAGCTCT 60.321 55.000 0.0 0.0 39.24 4.09 R
2359 2536 0.664224 CGGCCGTGTACTTTGGTTTT 59.336 50.000 19.5 0.0 0.00 2.43 R
3859 4058 1.582502 GTGCGTGTATGTAAGCGTCTC 59.417 52.381 0.0 0.0 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.766222 CATTCCAAAAGCATAGGTATCAGC 58.234 41.667 0.00 0.00 0.00 4.26
24 25 3.820557 TCCAAAAGCATAGGTATCAGCC 58.179 45.455 0.00 0.00 0.00 4.85
25 26 3.459598 TCCAAAAGCATAGGTATCAGCCT 59.540 43.478 0.00 0.00 42.43 4.58
26 27 3.817647 CCAAAAGCATAGGTATCAGCCTC 59.182 47.826 0.00 0.00 39.94 4.70
27 28 4.454678 CAAAAGCATAGGTATCAGCCTCA 58.545 43.478 0.00 0.00 39.94 3.86
28 29 4.989875 AAAGCATAGGTATCAGCCTCAT 57.010 40.909 0.00 0.00 39.94 2.90
29 30 4.989875 AAGCATAGGTATCAGCCTCATT 57.010 40.909 0.00 0.00 39.94 2.57
30 31 4.283363 AGCATAGGTATCAGCCTCATTG 57.717 45.455 0.00 0.00 39.94 2.82
31 32 3.649981 AGCATAGGTATCAGCCTCATTGT 59.350 43.478 0.00 0.00 39.94 2.71
32 33 4.103785 AGCATAGGTATCAGCCTCATTGTT 59.896 41.667 0.00 0.00 39.94 2.83
33 34 4.823989 GCATAGGTATCAGCCTCATTGTTT 59.176 41.667 0.00 0.00 39.94 2.83
34 35 5.300286 GCATAGGTATCAGCCTCATTGTTTT 59.700 40.000 0.00 0.00 39.94 2.43
35 36 6.486657 GCATAGGTATCAGCCTCATTGTTTTA 59.513 38.462 0.00 0.00 39.94 1.52
36 37 7.013274 GCATAGGTATCAGCCTCATTGTTTTAA 59.987 37.037 0.00 0.00 39.94 1.52
37 38 8.902806 CATAGGTATCAGCCTCATTGTTTTAAA 58.097 33.333 0.00 0.00 39.94 1.52
38 39 7.775053 AGGTATCAGCCTCATTGTTTTAAAA 57.225 32.000 0.00 0.00 32.39 1.52
39 40 7.602753 AGGTATCAGCCTCATTGTTTTAAAAC 58.397 34.615 21.66 21.66 35.21 2.43
40 41 7.232534 AGGTATCAGCCTCATTGTTTTAAAACA 59.767 33.333 26.05 26.05 39.76 2.83
51 52 5.517322 TGTTTTAAAACAACGGGCTATGT 57.483 34.783 27.26 0.00 45.17 2.29
52 53 5.521544 TGTTTTAAAACAACGGGCTATGTC 58.478 37.500 27.26 0.60 45.17 3.06
53 54 5.067413 TGTTTTAAAACAACGGGCTATGTCA 59.933 36.000 27.26 3.11 45.17 3.58
54 55 5.769484 TTTAAAACAACGGGCTATGTCAA 57.231 34.783 0.00 0.00 0.00 3.18
55 56 5.769484 TTAAAACAACGGGCTATGTCAAA 57.231 34.783 0.00 0.00 0.00 2.69
56 57 4.864704 AAAACAACGGGCTATGTCAAAT 57.135 36.364 0.00 0.00 0.00 2.32
57 58 5.968528 AAAACAACGGGCTATGTCAAATA 57.031 34.783 0.00 0.00 0.00 1.40
58 59 5.560966 AAACAACGGGCTATGTCAAATAG 57.439 39.130 0.00 0.00 0.00 1.73
59 60 4.481368 ACAACGGGCTATGTCAAATAGA 57.519 40.909 0.00 0.00 0.00 1.98
60 61 4.839121 ACAACGGGCTATGTCAAATAGAA 58.161 39.130 0.00 0.00 0.00 2.10
61 62 4.876107 ACAACGGGCTATGTCAAATAGAAG 59.124 41.667 0.00 0.00 0.00 2.85
62 63 4.073293 ACGGGCTATGTCAAATAGAAGG 57.927 45.455 0.00 0.00 0.00 3.46
63 64 3.709653 ACGGGCTATGTCAAATAGAAGGA 59.290 43.478 0.00 0.00 0.00 3.36
64 65 4.163458 ACGGGCTATGTCAAATAGAAGGAA 59.837 41.667 0.00 0.00 0.00 3.36
65 66 5.163195 ACGGGCTATGTCAAATAGAAGGAAT 60.163 40.000 0.00 0.00 0.00 3.01
66 67 5.180117 CGGGCTATGTCAAATAGAAGGAATG 59.820 44.000 0.00 0.00 0.00 2.67
67 68 6.064717 GGGCTATGTCAAATAGAAGGAATGT 58.935 40.000 0.00 0.00 0.00 2.71
68 69 6.547510 GGGCTATGTCAAATAGAAGGAATGTT 59.452 38.462 0.00 0.00 0.00 2.71
69 70 7.719633 GGGCTATGTCAAATAGAAGGAATGTTA 59.280 37.037 0.00 0.00 0.00 2.41
70 71 8.560374 GGCTATGTCAAATAGAAGGAATGTTAC 58.440 37.037 0.00 0.00 0.00 2.50
71 72 8.560374 GCTATGTCAAATAGAAGGAATGTTACC 58.440 37.037 0.00 0.00 0.00 2.85
72 73 9.613428 CTATGTCAAATAGAAGGAATGTTACCA 57.387 33.333 0.00 0.00 0.00 3.25
73 74 7.681939 TGTCAAATAGAAGGAATGTTACCAC 57.318 36.000 0.00 0.00 0.00 4.16
74 75 7.227873 TGTCAAATAGAAGGAATGTTACCACA 58.772 34.615 0.00 0.00 37.31 4.17
75 76 7.721842 TGTCAAATAGAAGGAATGTTACCACAA 59.278 33.333 0.00 0.00 36.16 3.33
76 77 8.573035 GTCAAATAGAAGGAATGTTACCACAAA 58.427 33.333 0.00 0.00 36.16 2.83
77 78 8.792633 TCAAATAGAAGGAATGTTACCACAAAG 58.207 33.333 0.00 0.00 36.16 2.77
78 79 8.792633 CAAATAGAAGGAATGTTACCACAAAGA 58.207 33.333 0.00 0.00 36.16 2.52
79 80 8.934023 AATAGAAGGAATGTTACCACAAAGAA 57.066 30.769 0.00 0.00 36.16 2.52
80 81 6.635030 AGAAGGAATGTTACCACAAAGAAC 57.365 37.500 0.00 0.00 36.16 3.01
81 82 6.126409 AGAAGGAATGTTACCACAAAGAACA 58.874 36.000 0.00 0.00 36.16 3.18
82 83 5.767816 AGGAATGTTACCACAAAGAACAC 57.232 39.130 0.00 0.00 35.99 3.32
83 84 5.197451 AGGAATGTTACCACAAAGAACACA 58.803 37.500 0.00 0.00 35.99 3.72
84 85 5.654650 AGGAATGTTACCACAAAGAACACAA 59.345 36.000 0.00 0.00 35.99 3.33
85 86 6.153680 AGGAATGTTACCACAAAGAACACAAA 59.846 34.615 0.00 0.00 35.99 2.83
86 87 6.254804 GGAATGTTACCACAAAGAACACAAAC 59.745 38.462 0.00 0.00 35.99 2.93
87 88 5.707242 TGTTACCACAAAGAACACAAACA 57.293 34.783 0.00 0.00 0.00 2.83
88 89 6.085555 TGTTACCACAAAGAACACAAACAA 57.914 33.333 0.00 0.00 0.00 2.83
89 90 6.513180 TGTTACCACAAAGAACACAAACAAA 58.487 32.000 0.00 0.00 0.00 2.83
90 91 6.421202 TGTTACCACAAAGAACACAAACAAAC 59.579 34.615 0.00 0.00 0.00 2.93
91 92 4.311606 ACCACAAAGAACACAAACAAACC 58.688 39.130 0.00 0.00 0.00 3.27
92 93 4.202264 ACCACAAAGAACACAAACAAACCA 60.202 37.500 0.00 0.00 0.00 3.67
93 94 4.752101 CCACAAAGAACACAAACAAACCAA 59.248 37.500 0.00 0.00 0.00 3.67
94 95 5.237344 CCACAAAGAACACAAACAAACCAAA 59.763 36.000 0.00 0.00 0.00 3.28
95 96 6.132724 CACAAAGAACACAAACAAACCAAAC 58.867 36.000 0.00 0.00 0.00 2.93
96 97 5.817816 ACAAAGAACACAAACAAACCAAACA 59.182 32.000 0.00 0.00 0.00 2.83
97 98 6.484977 ACAAAGAACACAAACAAACCAAACAT 59.515 30.769 0.00 0.00 0.00 2.71
98 99 6.479095 AAGAACACAAACAAACCAAACATG 57.521 33.333 0.00 0.00 0.00 3.21
99 100 4.391523 AGAACACAAACAAACCAAACATGC 59.608 37.500 0.00 0.00 0.00 4.06
100 101 3.936564 ACACAAACAAACCAAACATGCT 58.063 36.364 0.00 0.00 0.00 3.79
101 102 3.932089 ACACAAACAAACCAAACATGCTC 59.068 39.130 0.00 0.00 0.00 4.26
102 103 3.000122 CACAAACAAACCAAACATGCTCG 60.000 43.478 0.00 0.00 0.00 5.03
103 104 3.186119 CAAACAAACCAAACATGCTCGT 58.814 40.909 0.00 0.00 0.00 4.18
104 105 2.490328 ACAAACCAAACATGCTCGTG 57.510 45.000 0.00 0.00 0.00 4.35
105 106 2.020720 ACAAACCAAACATGCTCGTGA 58.979 42.857 0.00 0.00 0.00 4.35
106 107 2.033299 ACAAACCAAACATGCTCGTGAG 59.967 45.455 0.00 0.00 0.00 3.51
107 108 2.254546 AACCAAACATGCTCGTGAGA 57.745 45.000 0.00 0.00 39.12 3.27
108 109 2.254546 ACCAAACATGCTCGTGAGAA 57.745 45.000 0.00 0.00 41.32 2.87
109 110 2.571212 ACCAAACATGCTCGTGAGAAA 58.429 42.857 0.00 0.00 41.32 2.52
110 111 2.948979 ACCAAACATGCTCGTGAGAAAA 59.051 40.909 0.00 0.00 41.32 2.29
111 112 3.569701 ACCAAACATGCTCGTGAGAAAAT 59.430 39.130 0.00 0.00 41.32 1.82
112 113 4.161333 CCAAACATGCTCGTGAGAAAATC 58.839 43.478 0.00 0.00 41.32 2.17
113 114 4.161333 CAAACATGCTCGTGAGAAAATCC 58.839 43.478 0.00 0.00 41.32 3.01
114 115 2.002586 ACATGCTCGTGAGAAAATCCG 58.997 47.619 0.00 0.00 41.32 4.18
115 116 1.328680 CATGCTCGTGAGAAAATCCGG 59.671 52.381 0.00 0.00 41.32 5.14
116 117 1.019278 TGCTCGTGAGAAAATCCGGC 61.019 55.000 0.00 0.00 41.32 6.13
117 118 1.019278 GCTCGTGAGAAAATCCGGCA 61.019 55.000 0.00 0.00 41.32 5.69
118 119 1.438651 CTCGTGAGAAAATCCGGCAA 58.561 50.000 0.00 0.00 41.32 4.52
119 120 1.128692 CTCGTGAGAAAATCCGGCAAC 59.871 52.381 0.00 0.00 41.32 4.17
120 121 0.871722 CGTGAGAAAATCCGGCAACA 59.128 50.000 0.00 0.00 0.00 3.33
121 122 1.265635 CGTGAGAAAATCCGGCAACAA 59.734 47.619 0.00 0.00 0.00 2.83
122 123 2.665519 CGTGAGAAAATCCGGCAACAAG 60.666 50.000 0.00 0.00 0.00 3.16
123 124 2.293399 GTGAGAAAATCCGGCAACAAGT 59.707 45.455 0.00 0.00 0.00 3.16
124 125 2.552315 TGAGAAAATCCGGCAACAAGTC 59.448 45.455 0.00 0.00 0.00 3.01
125 126 1.886542 AGAAAATCCGGCAACAAGTCC 59.113 47.619 0.00 0.00 0.00 3.85
126 127 1.886542 GAAAATCCGGCAACAAGTCCT 59.113 47.619 0.00 0.00 0.00 3.85
127 128 1.995376 AAATCCGGCAACAAGTCCTT 58.005 45.000 0.00 0.00 0.00 3.36
128 129 1.995376 AATCCGGCAACAAGTCCTTT 58.005 45.000 0.00 0.00 0.00 3.11
129 130 2.871096 ATCCGGCAACAAGTCCTTTA 57.129 45.000 0.00 0.00 0.00 1.85
130 131 2.871096 TCCGGCAACAAGTCCTTTAT 57.129 45.000 0.00 0.00 0.00 1.40
131 132 3.985019 TCCGGCAACAAGTCCTTTATA 57.015 42.857 0.00 0.00 0.00 0.98
132 133 3.602483 TCCGGCAACAAGTCCTTTATAC 58.398 45.455 0.00 0.00 0.00 1.47
133 134 2.681344 CCGGCAACAAGTCCTTTATACC 59.319 50.000 0.00 0.00 0.00 2.73
134 135 2.350498 CGGCAACAAGTCCTTTATACCG 59.650 50.000 0.00 0.00 0.00 4.02
135 136 3.340928 GGCAACAAGTCCTTTATACCGT 58.659 45.455 0.00 0.00 0.00 4.83
136 137 3.754850 GGCAACAAGTCCTTTATACCGTT 59.245 43.478 0.00 0.00 0.00 4.44
137 138 4.379082 GGCAACAAGTCCTTTATACCGTTG 60.379 45.833 0.00 0.00 35.46 4.10
138 139 4.379082 GCAACAAGTCCTTTATACCGTTGG 60.379 45.833 0.00 0.00 34.09 3.77
139 140 4.895668 ACAAGTCCTTTATACCGTTGGA 57.104 40.909 0.00 0.00 0.00 3.53
140 141 4.572909 ACAAGTCCTTTATACCGTTGGAC 58.427 43.478 0.00 0.00 45.31 4.02
141 142 4.040706 ACAAGTCCTTTATACCGTTGGACA 59.959 41.667 12.16 0.00 46.81 4.02
142 143 5.183228 CAAGTCCTTTATACCGTTGGACAT 58.817 41.667 12.16 0.00 46.81 3.06
143 144 5.019785 AGTCCTTTATACCGTTGGACATC 57.980 43.478 12.16 0.00 46.81 3.06
144 145 4.124970 GTCCTTTATACCGTTGGACATCC 58.875 47.826 0.00 0.00 44.59 3.51
145 146 3.775866 TCCTTTATACCGTTGGACATCCA 59.224 43.478 0.00 0.00 45.94 3.41
146 147 4.410883 TCCTTTATACCGTTGGACATCCAT 59.589 41.667 0.34 0.00 46.97 3.41
147 148 4.515191 CCTTTATACCGTTGGACATCCATG 59.485 45.833 0.34 0.00 46.97 3.66
148 149 4.764050 TTATACCGTTGGACATCCATGT 57.236 40.909 0.34 2.84 46.97 3.21
159 160 3.090210 ACATCCATGTCAGGCAATTGA 57.910 42.857 10.34 0.00 35.87 2.57
160 161 3.021695 ACATCCATGTCAGGCAATTGAG 58.978 45.455 10.34 0.00 35.87 3.02
161 162 2.885135 TCCATGTCAGGCAATTGAGT 57.115 45.000 10.34 0.00 0.00 3.41
162 163 3.998913 TCCATGTCAGGCAATTGAGTA 57.001 42.857 10.34 0.00 0.00 2.59
163 164 4.299586 TCCATGTCAGGCAATTGAGTAA 57.700 40.909 10.34 0.00 0.00 2.24
164 165 4.661222 TCCATGTCAGGCAATTGAGTAAA 58.339 39.130 10.34 0.00 0.00 2.01
165 166 4.458989 TCCATGTCAGGCAATTGAGTAAAC 59.541 41.667 10.34 0.78 0.00 2.01
166 167 4.218200 CCATGTCAGGCAATTGAGTAAACA 59.782 41.667 10.34 6.60 0.00 2.83
167 168 5.396484 CATGTCAGGCAATTGAGTAAACAG 58.604 41.667 10.34 0.00 0.00 3.16
168 169 4.713553 TGTCAGGCAATTGAGTAAACAGA 58.286 39.130 10.34 0.00 0.00 3.41
169 170 4.756642 TGTCAGGCAATTGAGTAAACAGAG 59.243 41.667 10.34 0.00 0.00 3.35
170 171 3.753272 TCAGGCAATTGAGTAAACAGAGC 59.247 43.478 10.34 0.00 0.00 4.09
171 172 3.503363 CAGGCAATTGAGTAAACAGAGCA 59.497 43.478 10.34 0.00 0.00 4.26
172 173 4.157289 CAGGCAATTGAGTAAACAGAGCAT 59.843 41.667 10.34 0.00 0.00 3.79
173 174 5.355071 CAGGCAATTGAGTAAACAGAGCATA 59.645 40.000 10.34 0.00 0.00 3.14
174 175 6.039047 CAGGCAATTGAGTAAACAGAGCATAT 59.961 38.462 10.34 0.00 0.00 1.78
175 176 7.227314 CAGGCAATTGAGTAAACAGAGCATATA 59.773 37.037 10.34 0.00 0.00 0.86
176 177 7.941238 AGGCAATTGAGTAAACAGAGCATATAT 59.059 33.333 10.34 0.00 0.00 0.86
177 178 8.571336 GGCAATTGAGTAAACAGAGCATATATT 58.429 33.333 10.34 0.00 0.00 1.28
178 179 9.604626 GCAATTGAGTAAACAGAGCATATATTC 57.395 33.333 10.34 0.00 0.00 1.75
199 200 7.812690 ATTCATAATATCACAAGCAGAAGCA 57.187 32.000 0.00 0.00 45.49 3.91
200 201 7.812690 TTCATAATATCACAAGCAGAAGCAT 57.187 32.000 0.00 0.00 45.49 3.79
201 202 7.812690 TCATAATATCACAAGCAGAAGCATT 57.187 32.000 0.00 0.00 45.49 3.56
202 203 8.907222 TCATAATATCACAAGCAGAAGCATTA 57.093 30.769 0.00 0.00 45.49 1.90
203 204 9.341078 TCATAATATCACAAGCAGAAGCATTAA 57.659 29.630 0.00 0.00 45.49 1.40
204 205 9.955208 CATAATATCACAAGCAGAAGCATTAAA 57.045 29.630 0.00 0.00 45.49 1.52
205 206 9.956720 ATAATATCACAAGCAGAAGCATTAAAC 57.043 29.630 0.00 0.00 45.49 2.01
206 207 5.710513 ATCACAAGCAGAAGCATTAAACA 57.289 34.783 0.00 0.00 45.49 2.83
207 208 5.512753 TCACAAGCAGAAGCATTAAACAA 57.487 34.783 0.00 0.00 45.49 2.83
208 209 5.522456 TCACAAGCAGAAGCATTAAACAAG 58.478 37.500 0.00 0.00 45.49 3.16
209 210 4.149396 CACAAGCAGAAGCATTAAACAAGC 59.851 41.667 0.00 0.00 45.49 4.01
210 211 4.038402 ACAAGCAGAAGCATTAAACAAGCT 59.962 37.500 0.00 0.00 45.49 3.74
211 212 4.431661 AGCAGAAGCATTAAACAAGCTC 57.568 40.909 0.00 0.00 45.49 4.09
212 213 3.822735 AGCAGAAGCATTAAACAAGCTCA 59.177 39.130 0.00 0.00 45.49 4.26
213 214 4.461781 AGCAGAAGCATTAAACAAGCTCAT 59.538 37.500 0.00 0.00 45.49 2.90
214 215 5.649395 AGCAGAAGCATTAAACAAGCTCATA 59.351 36.000 0.00 0.00 45.49 2.15
215 216 5.741040 GCAGAAGCATTAAACAAGCTCATAC 59.259 40.000 0.00 0.00 41.58 2.39
216 217 6.623549 GCAGAAGCATTAAACAAGCTCATACA 60.624 38.462 0.00 0.00 41.58 2.29
217 218 7.307694 CAGAAGCATTAAACAAGCTCATACAA 58.692 34.615 0.00 0.00 37.70 2.41
218 219 7.272084 CAGAAGCATTAAACAAGCTCATACAAC 59.728 37.037 0.00 0.00 37.70 3.32
219 220 5.954335 AGCATTAAACAAGCTCATACAACC 58.046 37.500 0.00 0.00 32.05 3.77
220 221 5.476599 AGCATTAAACAAGCTCATACAACCA 59.523 36.000 0.00 0.00 32.05 3.67
221 222 6.015519 AGCATTAAACAAGCTCATACAACCAA 60.016 34.615 0.00 0.00 32.05 3.67
222 223 6.813152 GCATTAAACAAGCTCATACAACCAAT 59.187 34.615 0.00 0.00 0.00 3.16
223 224 7.201461 GCATTAAACAAGCTCATACAACCAATG 60.201 37.037 0.00 0.00 0.00 2.82
224 225 5.789643 AAACAAGCTCATACAACCAATGT 57.210 34.783 0.00 0.00 46.36 2.71
297 298 6.780198 TTATCTATACTGGCCATTTTCCCT 57.220 37.500 5.51 0.00 0.00 4.20
298 299 4.706842 TCTATACTGGCCATTTTCCCTC 57.293 45.455 5.51 0.00 0.00 4.30
299 300 4.307259 TCTATACTGGCCATTTTCCCTCT 58.693 43.478 5.51 0.00 0.00 3.69
300 301 2.806945 TACTGGCCATTTTCCCTCTG 57.193 50.000 5.51 0.00 0.00 3.35
301 302 1.075601 ACTGGCCATTTTCCCTCTGA 58.924 50.000 5.51 0.00 0.00 3.27
302 303 1.642762 ACTGGCCATTTTCCCTCTGAT 59.357 47.619 5.51 0.00 0.00 2.90
308 309 6.248433 TGGCCATTTTCCCTCTGATAATATC 58.752 40.000 0.00 0.00 0.00 1.63
342 346 4.755123 CACCCTTCGTGTGTCTTTTCTATT 59.245 41.667 0.00 0.00 37.73 1.73
344 348 6.425721 CACCCTTCGTGTGTCTTTTCTATTAA 59.574 38.462 0.00 0.00 37.73 1.40
413 421 4.369182 CGTCGGCTAAGTAAGATTCCATT 58.631 43.478 0.00 0.00 0.00 3.16
415 423 5.276868 CGTCGGCTAAGTAAGATTCCATTTG 60.277 44.000 0.00 0.00 0.00 2.32
416 424 4.574828 TCGGCTAAGTAAGATTCCATTTGC 59.425 41.667 0.00 0.00 0.00 3.68
417 425 4.576463 CGGCTAAGTAAGATTCCATTTGCT 59.424 41.667 0.00 0.00 0.00 3.91
418 426 5.277538 CGGCTAAGTAAGATTCCATTTGCTC 60.278 44.000 0.00 0.00 0.00 4.26
421 429 6.540189 GCTAAGTAAGATTCCATTTGCTCTGA 59.460 38.462 0.00 0.00 0.00 3.27
422 430 6.998968 AAGTAAGATTCCATTTGCTCTGAG 57.001 37.500 0.00 0.00 0.00 3.35
423 431 6.059787 AGTAAGATTCCATTTGCTCTGAGT 57.940 37.500 6.53 0.00 0.00 3.41
424 432 7.187824 AGTAAGATTCCATTTGCTCTGAGTA 57.812 36.000 6.53 0.00 0.00 2.59
425 433 7.271511 AGTAAGATTCCATTTGCTCTGAGTAG 58.728 38.462 6.53 0.00 0.00 2.57
426 434 4.450053 AGATTCCATTTGCTCTGAGTAGC 58.550 43.478 6.53 0.00 43.08 3.58
427 435 3.988976 TTCCATTTGCTCTGAGTAGCT 57.011 42.857 6.53 0.00 43.19 3.32
428 436 3.988976 TCCATTTGCTCTGAGTAGCTT 57.011 42.857 6.53 0.00 43.19 3.74
429 437 3.603532 TCCATTTGCTCTGAGTAGCTTG 58.396 45.455 6.53 1.38 43.19 4.01
430 438 3.008375 TCCATTTGCTCTGAGTAGCTTGT 59.992 43.478 6.53 0.00 43.19 3.16
431 439 4.222810 TCCATTTGCTCTGAGTAGCTTGTA 59.777 41.667 6.53 0.00 43.19 2.41
432 440 4.331168 CCATTTGCTCTGAGTAGCTTGTAC 59.669 45.833 6.53 0.00 43.19 2.90
433 441 4.873746 TTTGCTCTGAGTAGCTTGTACT 57.126 40.909 6.53 0.00 43.19 2.73
434 442 5.977489 TTTGCTCTGAGTAGCTTGTACTA 57.023 39.130 6.53 0.00 43.19 1.82
435 443 6.531503 TTTGCTCTGAGTAGCTTGTACTAT 57.468 37.500 6.53 0.00 43.19 2.12
436 444 7.640597 TTTGCTCTGAGTAGCTTGTACTATA 57.359 36.000 6.53 0.00 43.19 1.31
437 445 6.621316 TGCTCTGAGTAGCTTGTACTATAC 57.379 41.667 6.53 0.00 43.19 1.47
438 446 5.531659 TGCTCTGAGTAGCTTGTACTATACC 59.468 44.000 6.53 0.00 43.19 2.73
439 447 5.048573 GCTCTGAGTAGCTTGTACTATACCC 60.049 48.000 6.53 0.00 39.50 3.69
440 448 5.061853 TCTGAGTAGCTTGTACTATACCCG 58.938 45.833 0.00 0.00 0.00 5.28
441 449 3.567164 TGAGTAGCTTGTACTATACCCGC 59.433 47.826 0.00 0.00 0.00 6.13
442 450 3.559069 AGTAGCTTGTACTATACCCGCA 58.441 45.455 0.00 0.00 0.00 5.69
443 451 3.956199 AGTAGCTTGTACTATACCCGCAA 59.044 43.478 0.00 0.00 0.00 4.85
444 452 3.899052 AGCTTGTACTATACCCGCAAA 57.101 42.857 0.00 0.00 0.00 3.68
445 453 4.210724 AGCTTGTACTATACCCGCAAAA 57.789 40.909 0.00 0.00 0.00 2.44
446 454 4.581868 AGCTTGTACTATACCCGCAAAAA 58.418 39.130 0.00 0.00 0.00 1.94
492 500 1.448985 TGAAGACACTTATTGGCGCC 58.551 50.000 22.73 22.73 38.90 6.53
555 563 4.381612 CGCCAGTCGTAACCATGGATATAT 60.382 45.833 21.47 1.32 34.60 0.86
556 564 5.163591 CGCCAGTCGTAACCATGGATATATA 60.164 44.000 21.47 0.30 34.60 0.86
568 576 8.098963 ACCATGGATATATACTACTAGGACGA 57.901 38.462 21.47 0.00 0.00 4.20
569 577 8.554870 ACCATGGATATATACTACTAGGACGAA 58.445 37.037 21.47 0.00 0.00 3.85
574 582 8.485392 GGATATATACTACTAGGACGAAGGTCT 58.515 40.741 0.00 0.00 42.97 3.85
575 583 9.889128 GATATATACTACTAGGACGAAGGTCTT 57.111 37.037 0.00 0.00 42.97 3.01
591 599 9.638176 ACGAAGGTCTTAATTCTCCTAGTATTA 57.362 33.333 0.00 0.00 0.00 0.98
629 638 2.196776 GGGTCCCATCCCATGCAG 59.803 66.667 1.78 0.00 46.30 4.41
637 646 1.605753 CATCCCATGCAGACCTGATG 58.394 55.000 0.47 0.00 0.00 3.07
638 647 1.133884 CATCCCATGCAGACCTGATGT 60.134 52.381 0.47 0.00 0.00 3.06
639 648 1.878211 TCCCATGCAGACCTGATGTA 58.122 50.000 0.47 0.00 0.00 2.29
640 649 1.486310 TCCCATGCAGACCTGATGTAC 59.514 52.381 0.47 0.00 0.00 2.90
641 650 1.487976 CCCATGCAGACCTGATGTACT 59.512 52.381 0.47 0.00 0.00 2.73
642 651 2.484417 CCCATGCAGACCTGATGTACTC 60.484 54.545 0.47 0.00 0.00 2.59
643 652 2.484417 CCATGCAGACCTGATGTACTCC 60.484 54.545 0.47 0.00 0.00 3.85
644 653 1.195115 TGCAGACCTGATGTACTCCC 58.805 55.000 0.47 0.00 0.00 4.30
645 654 1.273267 TGCAGACCTGATGTACTCCCT 60.273 52.381 0.47 0.00 0.00 4.20
646 655 1.410882 GCAGACCTGATGTACTCCCTC 59.589 57.143 0.47 0.00 0.00 4.30
647 656 2.035632 CAGACCTGATGTACTCCCTCC 58.964 57.143 0.00 0.00 0.00 4.30
648 657 1.933765 AGACCTGATGTACTCCCTCCT 59.066 52.381 0.00 0.00 0.00 3.69
649 658 2.316372 AGACCTGATGTACTCCCTCCTT 59.684 50.000 0.00 0.00 0.00 3.36
650 659 2.696187 GACCTGATGTACTCCCTCCTTC 59.304 54.545 0.00 0.00 0.00 3.46
651 660 2.316372 ACCTGATGTACTCCCTCCTTCT 59.684 50.000 0.00 0.00 0.00 2.85
652 661 2.962421 CCTGATGTACTCCCTCCTTCTC 59.038 54.545 0.00 0.00 0.00 2.87
653 662 3.628513 CCTGATGTACTCCCTCCTTCTCA 60.629 52.174 0.00 0.00 0.00 3.27
654 663 4.026744 CTGATGTACTCCCTCCTTCTCAA 58.973 47.826 0.00 0.00 0.00 3.02
655 664 4.425772 TGATGTACTCCCTCCTTCTCAAA 58.574 43.478 0.00 0.00 0.00 2.69
656 665 4.844085 TGATGTACTCCCTCCTTCTCAAAA 59.156 41.667 0.00 0.00 0.00 2.44
657 666 5.488919 TGATGTACTCCCTCCTTCTCAAAAT 59.511 40.000 0.00 0.00 0.00 1.82
658 667 6.672218 TGATGTACTCCCTCCTTCTCAAAATA 59.328 38.462 0.00 0.00 0.00 1.40
659 668 7.348274 TGATGTACTCCCTCCTTCTCAAAATAT 59.652 37.037 0.00 0.00 0.00 1.28
660 669 8.798975 ATGTACTCCCTCCTTCTCAAAATATA 57.201 34.615 0.00 0.00 0.00 0.86
661 670 8.618240 TGTACTCCCTCCTTCTCAAAATATAA 57.382 34.615 0.00 0.00 0.00 0.98
662 671 8.705594 TGTACTCCCTCCTTCTCAAAATATAAG 58.294 37.037 0.00 0.00 0.00 1.73
663 672 7.142995 ACTCCCTCCTTCTCAAAATATAAGG 57.857 40.000 0.00 0.00 39.93 2.69
664 673 5.941788 TCCCTCCTTCTCAAAATATAAGGC 58.058 41.667 0.00 0.00 38.70 4.35
665 674 4.757149 CCCTCCTTCTCAAAATATAAGGCG 59.243 45.833 0.00 0.00 38.70 5.52
666 675 4.214332 CCTCCTTCTCAAAATATAAGGCGC 59.786 45.833 0.00 0.00 38.70 6.53
667 676 3.807622 TCCTTCTCAAAATATAAGGCGCG 59.192 43.478 0.00 0.00 38.70 6.86
668 677 3.807622 CCTTCTCAAAATATAAGGCGCGA 59.192 43.478 12.10 0.00 32.66 5.87
669 678 4.452455 CCTTCTCAAAATATAAGGCGCGAT 59.548 41.667 12.10 0.00 32.66 4.58
670 679 5.049405 CCTTCTCAAAATATAAGGCGCGATT 60.049 40.000 12.10 6.21 32.66 3.34
671 680 5.342806 TCTCAAAATATAAGGCGCGATTG 57.657 39.130 12.10 0.12 0.00 2.67
672 681 5.053811 TCTCAAAATATAAGGCGCGATTGA 58.946 37.500 12.10 4.62 0.00 2.57
673 682 5.700832 TCTCAAAATATAAGGCGCGATTGAT 59.299 36.000 12.10 0.00 0.00 2.57
674 683 6.204688 TCTCAAAATATAAGGCGCGATTGATT 59.795 34.615 12.10 5.56 0.00 2.57
675 684 6.734137 TCAAAATATAAGGCGCGATTGATTT 58.266 32.000 12.10 11.02 0.00 2.17
676 685 7.199766 TCAAAATATAAGGCGCGATTGATTTT 58.800 30.769 12.10 15.66 0.00 1.82
677 686 7.704472 TCAAAATATAAGGCGCGATTGATTTTT 59.296 29.630 12.10 8.41 0.00 1.94
695 704 4.902443 TTTTTACGGTCTTTGATGCACA 57.098 36.364 0.00 0.00 0.00 4.57
696 705 4.902443 TTTTACGGTCTTTGATGCACAA 57.098 36.364 0.00 0.00 36.65 3.33
697 706 3.889196 TTACGGTCTTTGATGCACAAC 57.111 42.857 0.00 0.00 38.29 3.32
698 707 1.967319 ACGGTCTTTGATGCACAACT 58.033 45.000 0.00 0.00 38.29 3.16
699 708 2.297701 ACGGTCTTTGATGCACAACTT 58.702 42.857 0.00 0.00 38.29 2.66
700 709 2.687935 ACGGTCTTTGATGCACAACTTT 59.312 40.909 0.00 0.00 38.29 2.66
701 710 3.044986 CGGTCTTTGATGCACAACTTTG 58.955 45.455 0.00 0.00 38.29 2.77
702 711 3.243035 CGGTCTTTGATGCACAACTTTGA 60.243 43.478 0.00 0.00 38.29 2.69
703 712 4.044426 GGTCTTTGATGCACAACTTTGAC 58.956 43.478 0.00 2.64 38.29 3.18
704 713 4.044426 GTCTTTGATGCACAACTTTGACC 58.956 43.478 0.00 0.00 38.29 4.02
705 714 3.698539 TCTTTGATGCACAACTTTGACCA 59.301 39.130 0.00 0.00 38.29 4.02
706 715 3.435105 TTGATGCACAACTTTGACCAC 57.565 42.857 0.00 0.00 33.18 4.16
707 716 2.653726 TGATGCACAACTTTGACCACT 58.346 42.857 0.00 0.00 0.00 4.00
708 717 3.814625 TGATGCACAACTTTGACCACTA 58.185 40.909 0.00 0.00 0.00 2.74
709 718 4.203226 TGATGCACAACTTTGACCACTAA 58.797 39.130 0.00 0.00 0.00 2.24
710 719 4.826733 TGATGCACAACTTTGACCACTAAT 59.173 37.500 0.00 0.00 0.00 1.73
711 720 6.000840 TGATGCACAACTTTGACCACTAATA 58.999 36.000 0.00 0.00 0.00 0.98
712 721 6.658816 TGATGCACAACTTTGACCACTAATAT 59.341 34.615 0.00 0.00 0.00 1.28
713 722 7.826744 TGATGCACAACTTTGACCACTAATATA 59.173 33.333 0.00 0.00 0.00 0.86
714 723 8.752005 ATGCACAACTTTGACCACTAATATAT 57.248 30.769 0.00 0.00 0.00 0.86
715 724 9.845740 ATGCACAACTTTGACCACTAATATATA 57.154 29.630 0.00 0.00 0.00 0.86
716 725 9.845740 TGCACAACTTTGACCACTAATATATAT 57.154 29.630 0.00 0.00 0.00 0.86
752 761 8.558700 TGGATTGAACATGTATAAATGACATCG 58.441 33.333 10.00 0.00 35.31 3.84
753 762 7.535258 GGATTGAACATGTATAAATGACATCGC 59.465 37.037 10.00 3.13 35.31 4.58
754 763 7.552458 TTGAACATGTATAAATGACATCGCT 57.448 32.000 10.00 0.00 35.31 4.93
755 764 6.947258 TGAACATGTATAAATGACATCGCTG 58.053 36.000 10.00 0.00 35.31 5.18
756 765 6.538381 TGAACATGTATAAATGACATCGCTGT 59.462 34.615 10.00 0.00 35.31 4.40
757 766 7.708752 TGAACATGTATAAATGACATCGCTGTA 59.291 33.333 10.00 0.00 35.31 2.74
758 767 8.607441 AACATGTATAAATGACATCGCTGTAT 57.393 30.769 10.00 0.00 35.31 2.29
759 768 8.607441 ACATGTATAAATGACATCGCTGTATT 57.393 30.769 10.00 0.00 35.31 1.89
760 769 9.056005 ACATGTATAAATGACATCGCTGTATTT 57.944 29.630 10.00 2.68 35.31 1.40
761 770 9.321590 CATGTATAAATGACATCGCTGTATTTG 57.678 33.333 0.00 0.00 35.31 2.32
762 771 8.432110 TGTATAAATGACATCGCTGTATTTGT 57.568 30.769 12.76 10.27 35.14 2.83
763 772 8.547894 TGTATAAATGACATCGCTGTATTTGTC 58.452 33.333 12.76 0.00 39.11 3.18
764 773 7.792374 ATAAATGACATCGCTGTATTTGTCT 57.208 32.000 12.76 1.98 39.33 3.41
765 774 6.500684 AAATGACATCGCTGTATTTGTCTT 57.499 33.333 0.00 0.00 39.33 3.01
766 775 4.926860 TGACATCGCTGTATTTGTCTTG 57.073 40.909 0.00 0.00 39.33 3.02
767 776 3.125146 TGACATCGCTGTATTTGTCTTGC 59.875 43.478 0.00 0.00 39.33 4.01
768 777 3.073678 ACATCGCTGTATTTGTCTTGCA 58.926 40.909 0.00 0.00 32.49 4.08
769 778 3.501828 ACATCGCTGTATTTGTCTTGCAA 59.498 39.130 0.00 0.00 32.49 4.08
770 779 5.842780 GACATCGCTGTATTTGTCTTGCAAA 60.843 40.000 0.00 0.00 42.47 3.68
771 780 7.586187 GACATCGCTGTATTTGTCTTGCAAAG 61.586 42.308 0.00 0.00 42.00 2.77
848 857 7.851822 AAAATATAGTCAAAGTTGTGCAACG 57.148 32.000 9.10 0.00 45.50 4.10
849 858 6.795098 AATATAGTCAAAGTTGTGCAACGA 57.205 33.333 9.10 0.00 45.50 3.85
850 859 6.795098 ATATAGTCAAAGTTGTGCAACGAA 57.205 33.333 9.10 0.00 45.50 3.85
851 860 3.405170 AGTCAAAGTTGTGCAACGAAG 57.595 42.857 9.10 4.04 45.50 3.79
852 861 3.006940 AGTCAAAGTTGTGCAACGAAGA 58.993 40.909 9.10 6.01 45.50 2.87
853 862 3.627577 AGTCAAAGTTGTGCAACGAAGAT 59.372 39.130 9.10 0.00 45.50 2.40
854 863 3.968724 GTCAAAGTTGTGCAACGAAGATC 59.031 43.478 9.10 0.00 45.50 2.75
855 864 3.625313 TCAAAGTTGTGCAACGAAGATCA 59.375 39.130 9.10 0.00 45.50 2.92
856 865 3.885484 AAGTTGTGCAACGAAGATCAG 57.115 42.857 9.10 0.00 45.50 2.90
857 866 3.111853 AGTTGTGCAACGAAGATCAGA 57.888 42.857 9.10 0.00 45.50 3.27
858 867 3.466836 AGTTGTGCAACGAAGATCAGAA 58.533 40.909 9.10 0.00 45.50 3.02
859 868 3.876914 AGTTGTGCAACGAAGATCAGAAA 59.123 39.130 9.10 0.00 45.50 2.52
860 869 4.335315 AGTTGTGCAACGAAGATCAGAAAA 59.665 37.500 9.10 0.00 45.50 2.29
861 870 4.472691 TGTGCAACGAAGATCAGAAAAG 57.527 40.909 0.00 0.00 42.39 2.27
862 871 3.876914 TGTGCAACGAAGATCAGAAAAGT 59.123 39.130 0.00 0.00 42.39 2.66
863 872 4.024893 TGTGCAACGAAGATCAGAAAAGTC 60.025 41.667 0.00 0.00 42.39 3.01
864 873 4.024893 GTGCAACGAAGATCAGAAAAGTCA 60.025 41.667 0.00 0.00 0.00 3.41
865 874 4.574421 TGCAACGAAGATCAGAAAAGTCAA 59.426 37.500 0.00 0.00 0.00 3.18
866 875 5.065859 TGCAACGAAGATCAGAAAAGTCAAA 59.934 36.000 0.00 0.00 0.00 2.69
867 876 5.396654 GCAACGAAGATCAGAAAAGTCAAAC 59.603 40.000 0.00 0.00 0.00 2.93
868 877 5.674933 ACGAAGATCAGAAAAGTCAAACC 57.325 39.130 0.00 0.00 0.00 3.27
869 878 4.211374 ACGAAGATCAGAAAAGTCAAACCG 59.789 41.667 0.00 0.00 0.00 4.44
870 879 4.211374 CGAAGATCAGAAAAGTCAAACCGT 59.789 41.667 0.00 0.00 0.00 4.83
871 880 5.424121 AAGATCAGAAAAGTCAAACCGTG 57.576 39.130 0.00 0.00 0.00 4.94
872 881 3.251004 AGATCAGAAAAGTCAAACCGTGC 59.749 43.478 0.00 0.00 0.00 5.34
873 882 1.673920 TCAGAAAAGTCAAACCGTGCC 59.326 47.619 0.00 0.00 0.00 5.01
874 883 1.676006 CAGAAAAGTCAAACCGTGCCT 59.324 47.619 0.00 0.00 0.00 4.75
875 884 2.099098 CAGAAAAGTCAAACCGTGCCTT 59.901 45.455 0.00 0.00 0.00 4.35
876 885 3.314080 CAGAAAAGTCAAACCGTGCCTTA 59.686 43.478 0.00 0.00 0.00 2.69
877 886 4.023193 CAGAAAAGTCAAACCGTGCCTTAT 60.023 41.667 0.00 0.00 0.00 1.73
878 887 5.180492 CAGAAAAGTCAAACCGTGCCTTATA 59.820 40.000 0.00 0.00 0.00 0.98
879 888 5.944007 AGAAAAGTCAAACCGTGCCTTATAT 59.056 36.000 0.00 0.00 0.00 0.86
880 889 6.433093 AGAAAAGTCAAACCGTGCCTTATATT 59.567 34.615 0.00 0.00 0.00 1.28
881 890 6.584185 AAAGTCAAACCGTGCCTTATATTT 57.416 33.333 0.00 0.00 0.00 1.40
882 891 6.584185 AAGTCAAACCGTGCCTTATATTTT 57.416 33.333 0.00 0.00 0.00 1.82
883 892 5.949735 AGTCAAACCGTGCCTTATATTTTG 58.050 37.500 0.00 0.00 0.00 2.44
884 893 5.099575 GTCAAACCGTGCCTTATATTTTGG 58.900 41.667 0.00 0.00 0.00 3.28
885 894 4.158764 TCAAACCGTGCCTTATATTTTGGG 59.841 41.667 0.00 0.00 0.00 4.12
886 895 3.655615 ACCGTGCCTTATATTTTGGGA 57.344 42.857 0.00 0.00 0.00 4.37
887 896 3.970842 ACCGTGCCTTATATTTTGGGAA 58.029 40.909 0.00 0.00 0.00 3.97
888 897 3.951680 ACCGTGCCTTATATTTTGGGAAG 59.048 43.478 0.00 0.00 0.00 3.46
889 898 3.317993 CCGTGCCTTATATTTTGGGAAGG 59.682 47.826 0.00 0.00 41.26 3.46
890 899 4.204012 CGTGCCTTATATTTTGGGAAGGA 58.796 43.478 3.71 0.00 40.88 3.36
891 900 4.275936 CGTGCCTTATATTTTGGGAAGGAG 59.724 45.833 3.71 0.00 40.88 3.69
892 901 4.584743 GTGCCTTATATTTTGGGAAGGAGG 59.415 45.833 3.71 0.00 40.88 4.30
893 902 4.152647 GCCTTATATTTTGGGAAGGAGGG 58.847 47.826 3.71 0.00 40.88 4.30
894 903 4.141018 GCCTTATATTTTGGGAAGGAGGGA 60.141 45.833 3.71 0.00 40.88 4.20
924 1022 8.365938 CGTACTATAAGTATGCATCACATTTCG 58.634 37.037 0.19 0.00 40.38 3.46
932 1030 2.030096 TGCATCACATTTCGCACACATT 60.030 40.909 0.00 0.00 0.00 2.71
974 1074 1.064758 AGGCAGTTTGGTTGACAGACA 60.065 47.619 0.00 0.00 36.69 3.41
975 1075 1.334869 GGCAGTTTGGTTGACAGACAG 59.665 52.381 0.00 0.00 36.69 3.51
1050 1157 1.267806 CTTGTTGCCTTAGCCACAGTG 59.732 52.381 0.00 0.00 44.60 3.66
1053 1160 2.304470 TGTTGCCTTAGCCACAGTGATA 59.696 45.455 0.62 0.00 39.56 2.15
1067 1174 5.392380 CCACAGTGATAATCTTTGCTTGGTC 60.392 44.000 0.62 0.00 0.00 4.02
1323 1430 1.738099 GCATGACCTCACGTTCGCT 60.738 57.895 0.00 0.00 0.00 4.93
1383 1490 1.812093 CGGCAAGGGAATCGCGTTA 60.812 57.895 5.77 0.00 0.00 3.18
1431 1538 3.592898 ATGCGGAAGATATGCATCGTA 57.407 42.857 0.19 0.00 45.68 3.43
1443 1550 2.095461 TGCATCGTAGAGCTTCTGAGT 58.905 47.619 0.00 0.00 43.63 3.41
1804 1929 2.358003 GCAAGGCTGAGCGTGAGT 60.358 61.111 10.49 0.00 0.00 3.41
1805 1930 2.386660 GCAAGGCTGAGCGTGAGTC 61.387 63.158 10.49 0.00 0.00 3.36
1806 1931 1.739562 CAAGGCTGAGCGTGAGTCC 60.740 63.158 0.00 0.00 0.00 3.85
1807 1932 2.948720 AAGGCTGAGCGTGAGTCCC 61.949 63.158 0.00 0.00 0.00 4.46
1808 1933 3.695606 GGCTGAGCGTGAGTCCCA 61.696 66.667 0.00 0.00 0.00 4.37
1809 1934 2.433318 GCTGAGCGTGAGTCCCAC 60.433 66.667 0.00 0.00 42.30 4.61
1884 2015 1.738099 CAAGGAGGACTCGTTGGCG 60.738 63.158 21.02 2.62 46.06 5.69
1939 2070 5.239306 GTCATCTCTGTGAGTATCCTCTCTG 59.761 48.000 0.00 0.00 38.61 3.35
1940 2071 4.163441 TCTCTGTGAGTATCCTCTCTGG 57.837 50.000 0.00 0.00 38.61 3.86
1942 2073 2.024941 TCTGTGAGTATCCTCTCTGGCA 60.025 50.000 0.00 0.00 38.61 4.92
1943 2074 2.964464 CTGTGAGTATCCTCTCTGGCAT 59.036 50.000 0.00 0.00 38.61 4.40
1944 2075 4.141158 TCTGTGAGTATCCTCTCTGGCATA 60.141 45.833 0.00 0.00 38.61 3.14
1945 2076 4.745351 TGTGAGTATCCTCTCTGGCATAT 58.255 43.478 0.00 0.00 38.61 1.78
1972 2103 6.557110 AGATTAACTCTGTCTTTCGTCTAGC 58.443 40.000 0.00 0.00 31.12 3.42
1973 2104 5.961396 TTAACTCTGTCTTTCGTCTAGCT 57.039 39.130 0.00 0.00 0.00 3.32
1974 2105 7.553402 AGATTAACTCTGTCTTTCGTCTAGCTA 59.447 37.037 0.00 0.00 31.12 3.32
1975 2106 5.554822 AACTCTGTCTTTCGTCTAGCTAG 57.445 43.478 15.01 15.01 0.00 3.42
1992 2123 7.174253 GTCTAGCTAGTGTTATAGACTCTGCAT 59.826 40.741 20.10 0.00 40.52 3.96
1993 2124 6.083098 AGCTAGTGTTATAGACTCTGCATG 57.917 41.667 0.00 0.00 34.21 4.06
1994 2125 4.683781 GCTAGTGTTATAGACTCTGCATGC 59.316 45.833 11.82 11.82 34.21 4.06
1995 2126 4.743057 AGTGTTATAGACTCTGCATGCA 57.257 40.909 21.29 21.29 31.22 3.96
2040 2171 0.685097 GTGTTGCACACCCTCCTCTA 59.315 55.000 7.86 0.00 43.05 2.43
2050 2181 5.316987 CACACCCTCCTCTATTTTCTTGTT 58.683 41.667 0.00 0.00 0.00 2.83
2195 2368 6.649973 AGCTAGCATCATGAACAATCATAGTC 59.350 38.462 18.83 0.00 44.53 2.59
2291 2468 7.663081 ACTTGACAAACTCATAGATTGTGACAT 59.337 33.333 7.22 0.00 40.59 3.06
2341 2518 1.487142 TCGAAACAGACTTTCACCCCA 59.513 47.619 0.00 0.00 0.00 4.96
2395 2572 4.232221 CGGCCGAACGATACAATATAGTT 58.768 43.478 24.07 0.00 35.47 2.24
2402 2579 7.148639 CCGAACGATACAATATAGTTGGAATGG 60.149 40.741 0.00 0.00 0.00 3.16
2403 2580 7.148639 CGAACGATACAATATAGTTGGAATGGG 60.149 40.741 0.00 0.00 0.00 4.00
2429 2606 7.201857 GCCCTTACAAAGCAGATCAAAAGATAT 60.202 37.037 0.00 0.00 0.00 1.63
2430 2607 9.342308 CCCTTACAAAGCAGATCAAAAGATATA 57.658 33.333 0.00 0.00 0.00 0.86
2440 2617 7.040892 GCAGATCAAAAGATATAACATGAGCCA 60.041 37.037 0.00 0.00 0.00 4.75
2449 2626 4.708726 ATAACATGAGCCAAGAACAAGC 57.291 40.909 0.00 0.00 0.00 4.01
2451 2628 0.529378 CATGAGCCAAGAACAAGCCC 59.471 55.000 0.00 0.00 0.00 5.19
2463 2640 3.884774 AAGCCCAACACCTCGCCA 61.885 61.111 0.00 0.00 0.00 5.69
2497 2674 2.111384 GACCCCTGAGCTCTATGACAA 58.889 52.381 16.19 0.00 0.00 3.18
2537 2715 2.049063 GAAGCGTCGCCACTGTCT 60.049 61.111 14.86 0.00 0.00 3.41
2703 2893 4.941873 GTGACATGGGGTAAGGAGTTTAAG 59.058 45.833 0.00 0.00 0.00 1.85
2744 2934 4.588106 TGAAAGCAGTTGAAATCATGGGAA 59.412 37.500 0.00 0.00 0.00 3.97
2854 3044 7.773690 GGTATTTTATCACCTGTGGTCTACATT 59.226 37.037 0.00 0.00 38.92 2.71
2952 3142 5.815581 ACATATTTGGAGCTGGTAGTGAAA 58.184 37.500 0.00 0.00 0.00 2.69
3014 3204 1.250840 AAAACCCTGAAGCGATGGCC 61.251 55.000 0.00 0.00 41.24 5.36
3105 3295 5.817816 GGTGAACTCCATTACTTACAGATGG 59.182 44.000 0.00 0.00 41.32 3.51
3146 3336 4.168283 AGGTTACATCCTCCTGCTACTCTA 59.832 45.833 0.00 0.00 31.32 2.43
3293 3483 6.441088 ACCTTCAAACCAGAGAGATTTAGT 57.559 37.500 0.00 0.00 0.00 2.24
3398 3588 2.225091 TGGCACATCAACCTTGGAGATT 60.225 45.455 0.00 0.00 0.00 2.40
3584 3776 1.132262 CGTGGAAATGCACATGGGTAC 59.868 52.381 5.90 0.00 0.00 3.34
3630 3828 2.495409 TGCGAGTGTTTACGTCTTGA 57.505 45.000 0.00 0.00 0.00 3.02
3689 3887 5.243426 TGTTGCAACTCTGGTTTCTTAAC 57.757 39.130 28.61 0.00 32.73 2.01
3777 3975 3.181477 CCGCATTCATATTGGCCAGAAAA 60.181 43.478 5.11 0.00 0.00 2.29
3859 4058 7.837202 TTTTATAGAAACACAGTATGGACGG 57.163 36.000 0.00 0.00 43.62 4.79
3887 4086 0.613260 ACATACACGCACTCACCCAT 59.387 50.000 0.00 0.00 0.00 4.00
3889 4088 2.434336 ACATACACGCACTCACCCATAT 59.566 45.455 0.00 0.00 0.00 1.78
3890 4089 2.595124 TACACGCACTCACCCATATG 57.405 50.000 0.00 0.00 0.00 1.78
3902 4105 1.012343 CCATATGAACGCACGCACG 60.012 57.895 3.65 0.00 39.50 5.34
3940 4143 3.311106 ACGAAAATTGACAAGCATGCAG 58.689 40.909 21.98 14.52 0.00 4.41
4018 4225 8.860128 GGAATTGGATTCTTTACAATCGTTTTC 58.140 33.333 1.21 0.00 39.24 2.29
4027 4234 9.872757 TTCTTTACAATCGTTTTCAGATAACAC 57.127 29.630 4.82 0.00 0.00 3.32
4166 4373 1.253800 CTTGCGTCAATCATCGTCGAG 59.746 52.381 0.00 0.00 0.00 4.04
4219 4426 2.884367 CCGGTTTGCGCAATGGAT 59.116 55.556 25.64 0.00 0.00 3.41
4230 4437 1.433064 CAATGGATTTCGGCACCGG 59.567 57.895 9.58 0.00 40.25 5.28
4262 4469 4.382254 CCCCTTGTAGTGCTTGATTACGTA 60.382 45.833 0.00 0.00 0.00 3.57
4284 4491 6.237675 CGTAGTTCTATGTTGATGCTGTGAAG 60.238 42.308 0.00 0.00 0.00 3.02
4307 4514 8.712285 AAGCGCTTGTAATAAGTATTTGAGTA 57.288 30.769 24.40 0.00 0.00 2.59
4365 4573 8.359642 TGCACTTCCAATTTATCTATATTTGCC 58.640 33.333 0.00 0.00 0.00 4.52
4477 4685 4.140536 TGTTCTCATGCACATAAACCACA 58.859 39.130 0.00 0.00 0.00 4.17
4517 4725 4.718774 AGCATCCATACCTACCTATCATGG 59.281 45.833 0.00 0.00 37.98 3.66
4518 4726 4.471386 GCATCCATACCTACCTATCATGGT 59.529 45.833 0.00 0.00 43.66 3.55
4532 4740 8.511748 ACCTATCATGGTATTTTCATAGTCCT 57.488 34.615 0.00 0.00 38.79 3.85
4533 4741 9.615660 ACCTATCATGGTATTTTCATAGTCCTA 57.384 33.333 0.00 0.00 38.79 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.278660 GGCTGATACCTATGCTTTTGGAATG 60.279 44.000 0.00 0.00 0.00 2.67
2 3 4.079787 AGGCTGATACCTATGCTTTTGGAA 60.080 41.667 0.00 0.00 38.67 3.53
3 4 3.459598 AGGCTGATACCTATGCTTTTGGA 59.540 43.478 0.00 0.00 38.67 3.53
4 5 3.817647 GAGGCTGATACCTATGCTTTTGG 59.182 47.826 0.00 0.00 41.32 3.28
5 6 4.454678 TGAGGCTGATACCTATGCTTTTG 58.545 43.478 0.00 0.00 41.32 2.44
6 7 4.778213 TGAGGCTGATACCTATGCTTTT 57.222 40.909 0.00 0.00 41.32 2.27
7 8 4.989875 ATGAGGCTGATACCTATGCTTT 57.010 40.909 0.00 0.00 41.32 3.51
8 9 4.103785 ACAATGAGGCTGATACCTATGCTT 59.896 41.667 0.00 0.00 41.32 3.91
9 10 3.649981 ACAATGAGGCTGATACCTATGCT 59.350 43.478 0.00 0.00 41.32 3.79
10 11 4.013267 ACAATGAGGCTGATACCTATGC 57.987 45.455 0.00 0.00 41.32 3.14
11 12 6.949352 AAAACAATGAGGCTGATACCTATG 57.051 37.500 0.00 0.00 41.32 2.23
12 13 9.474313 TTTTAAAACAATGAGGCTGATACCTAT 57.526 29.630 0.00 0.00 41.32 2.57
13 14 8.736244 GTTTTAAAACAATGAGGCTGATACCTA 58.264 33.333 23.12 0.00 38.32 3.08
14 15 7.232534 TGTTTTAAAACAATGAGGCTGATACCT 59.767 33.333 27.26 0.00 45.17 3.08
15 16 7.375053 TGTTTTAAAACAATGAGGCTGATACC 58.625 34.615 27.26 0.00 45.17 2.73
29 30 5.067413 TGACATAGCCCGTTGTTTTAAAACA 59.933 36.000 26.05 26.05 46.35 2.83
30 31 5.521544 TGACATAGCCCGTTGTTTTAAAAC 58.478 37.500 21.66 21.66 39.33 2.43
31 32 5.769484 TGACATAGCCCGTTGTTTTAAAA 57.231 34.783 0.00 0.00 0.00 1.52
32 33 5.769484 TTGACATAGCCCGTTGTTTTAAA 57.231 34.783 0.00 0.00 0.00 1.52
33 34 5.769484 TTTGACATAGCCCGTTGTTTTAA 57.231 34.783 0.00 0.00 0.00 1.52
34 35 5.968528 ATTTGACATAGCCCGTTGTTTTA 57.031 34.783 0.00 0.00 0.00 1.52
35 36 4.864704 ATTTGACATAGCCCGTTGTTTT 57.135 36.364 0.00 0.00 0.00 2.43
36 37 5.250200 TCTATTTGACATAGCCCGTTGTTT 58.750 37.500 0.00 0.00 0.00 2.83
37 38 4.839121 TCTATTTGACATAGCCCGTTGTT 58.161 39.130 0.00 0.00 0.00 2.83
38 39 4.481368 TCTATTTGACATAGCCCGTTGT 57.519 40.909 0.00 0.00 0.00 3.32
39 40 4.273480 CCTTCTATTTGACATAGCCCGTTG 59.727 45.833 0.00 0.00 0.00 4.10
40 41 4.163458 TCCTTCTATTTGACATAGCCCGTT 59.837 41.667 0.00 0.00 0.00 4.44
41 42 3.709653 TCCTTCTATTTGACATAGCCCGT 59.290 43.478 0.00 0.00 0.00 5.28
42 43 4.336889 TCCTTCTATTTGACATAGCCCG 57.663 45.455 0.00 0.00 0.00 6.13
43 44 6.064717 ACATTCCTTCTATTTGACATAGCCC 58.935 40.000 0.00 0.00 0.00 5.19
44 45 7.573968 AACATTCCTTCTATTTGACATAGCC 57.426 36.000 0.00 0.00 0.00 3.93
45 46 8.560374 GGTAACATTCCTTCTATTTGACATAGC 58.440 37.037 0.00 0.00 0.00 2.97
46 47 9.613428 TGGTAACATTCCTTCTATTTGACATAG 57.387 33.333 0.00 0.00 46.17 2.23
66 67 6.128769 GGTTTGTTTGTGTTCTTTGTGGTAAC 60.129 38.462 0.00 0.00 0.00 2.50
67 68 5.927115 GGTTTGTTTGTGTTCTTTGTGGTAA 59.073 36.000 0.00 0.00 0.00 2.85
68 69 5.010719 TGGTTTGTTTGTGTTCTTTGTGGTA 59.989 36.000 0.00 0.00 0.00 3.25
69 70 4.202264 TGGTTTGTTTGTGTTCTTTGTGGT 60.202 37.500 0.00 0.00 0.00 4.16
70 71 4.310769 TGGTTTGTTTGTGTTCTTTGTGG 58.689 39.130 0.00 0.00 0.00 4.17
71 72 5.914085 TTGGTTTGTTTGTGTTCTTTGTG 57.086 34.783 0.00 0.00 0.00 3.33
72 73 5.817816 TGTTTGGTTTGTTTGTGTTCTTTGT 59.182 32.000 0.00 0.00 0.00 2.83
73 74 6.292389 TGTTTGGTTTGTTTGTGTTCTTTG 57.708 33.333 0.00 0.00 0.00 2.77
74 75 6.567511 GCATGTTTGGTTTGTTTGTGTTCTTT 60.568 34.615 0.00 0.00 0.00 2.52
75 76 5.106752 GCATGTTTGGTTTGTTTGTGTTCTT 60.107 36.000 0.00 0.00 0.00 2.52
76 77 4.391523 GCATGTTTGGTTTGTTTGTGTTCT 59.608 37.500 0.00 0.00 0.00 3.01
77 78 4.391523 AGCATGTTTGGTTTGTTTGTGTTC 59.608 37.500 0.00 0.00 0.00 3.18
78 79 4.322567 AGCATGTTTGGTTTGTTTGTGTT 58.677 34.783 0.00 0.00 0.00 3.32
79 80 3.932089 GAGCATGTTTGGTTTGTTTGTGT 59.068 39.130 0.00 0.00 32.62 3.72
80 81 3.000122 CGAGCATGTTTGGTTTGTTTGTG 60.000 43.478 0.00 0.00 32.62 3.33
81 82 3.186119 CGAGCATGTTTGGTTTGTTTGT 58.814 40.909 0.00 0.00 32.62 2.83
82 83 3.000122 CACGAGCATGTTTGGTTTGTTTG 60.000 43.478 1.52 0.00 32.62 2.93
83 84 3.119316 TCACGAGCATGTTTGGTTTGTTT 60.119 39.130 1.52 0.00 32.62 2.83
84 85 2.425312 TCACGAGCATGTTTGGTTTGTT 59.575 40.909 1.52 0.00 32.62 2.83
85 86 2.020720 TCACGAGCATGTTTGGTTTGT 58.979 42.857 1.52 0.00 32.62 2.83
86 87 2.290367 TCTCACGAGCATGTTTGGTTTG 59.710 45.455 1.52 0.00 32.62 2.93
87 88 2.571212 TCTCACGAGCATGTTTGGTTT 58.429 42.857 1.52 0.00 32.62 3.27
88 89 2.254546 TCTCACGAGCATGTTTGGTT 57.745 45.000 1.52 0.00 32.62 3.67
89 90 2.254546 TTCTCACGAGCATGTTTGGT 57.745 45.000 1.52 0.00 35.95 3.67
90 91 3.624326 TTTTCTCACGAGCATGTTTGG 57.376 42.857 1.52 0.00 0.00 3.28
91 92 4.161333 GGATTTTCTCACGAGCATGTTTG 58.839 43.478 0.00 0.00 0.00 2.93
92 93 3.120199 CGGATTTTCTCACGAGCATGTTT 60.120 43.478 0.00 0.00 0.00 2.83
93 94 2.416547 CGGATTTTCTCACGAGCATGTT 59.583 45.455 0.00 0.00 0.00 2.71
94 95 2.002586 CGGATTTTCTCACGAGCATGT 58.997 47.619 0.00 0.00 0.00 3.21
95 96 1.328680 CCGGATTTTCTCACGAGCATG 59.671 52.381 0.00 0.00 0.00 4.06
96 97 1.656652 CCGGATTTTCTCACGAGCAT 58.343 50.000 0.00 0.00 0.00 3.79
97 98 1.019278 GCCGGATTTTCTCACGAGCA 61.019 55.000 5.05 0.00 0.00 4.26
98 99 1.019278 TGCCGGATTTTCTCACGAGC 61.019 55.000 5.05 0.00 0.00 5.03
99 100 1.128692 GTTGCCGGATTTTCTCACGAG 59.871 52.381 5.05 0.00 0.00 4.18
100 101 1.153353 GTTGCCGGATTTTCTCACGA 58.847 50.000 5.05 0.00 0.00 4.35
101 102 0.871722 TGTTGCCGGATTTTCTCACG 59.128 50.000 5.05 0.00 0.00 4.35
102 103 2.293399 ACTTGTTGCCGGATTTTCTCAC 59.707 45.455 5.05 0.00 0.00 3.51
103 104 2.552315 GACTTGTTGCCGGATTTTCTCA 59.448 45.455 5.05 0.00 0.00 3.27
104 105 2.095212 GGACTTGTTGCCGGATTTTCTC 60.095 50.000 5.05 0.00 0.00 2.87
105 106 1.886542 GGACTTGTTGCCGGATTTTCT 59.113 47.619 5.05 0.00 0.00 2.52
106 107 1.886542 AGGACTTGTTGCCGGATTTTC 59.113 47.619 5.05 0.00 0.00 2.29
107 108 1.995376 AGGACTTGTTGCCGGATTTT 58.005 45.000 5.05 0.00 0.00 1.82
108 109 1.995376 AAGGACTTGTTGCCGGATTT 58.005 45.000 5.05 0.00 0.00 2.17
109 110 1.995376 AAAGGACTTGTTGCCGGATT 58.005 45.000 5.05 0.00 0.00 3.01
110 111 2.871096 TAAAGGACTTGTTGCCGGAT 57.129 45.000 5.05 0.00 0.00 4.18
111 112 2.871096 ATAAAGGACTTGTTGCCGGA 57.129 45.000 5.05 0.00 0.00 5.14
112 113 2.681344 GGTATAAAGGACTTGTTGCCGG 59.319 50.000 0.00 0.00 0.00 6.13
113 114 2.350498 CGGTATAAAGGACTTGTTGCCG 59.650 50.000 8.70 8.70 31.42 5.69
114 115 3.340928 ACGGTATAAAGGACTTGTTGCC 58.659 45.455 0.00 0.00 0.00 4.52
115 116 4.379082 CCAACGGTATAAAGGACTTGTTGC 60.379 45.833 5.61 0.00 34.60 4.17
116 117 4.998672 TCCAACGGTATAAAGGACTTGTTG 59.001 41.667 0.00 0.00 35.15 3.33
117 118 4.999311 GTCCAACGGTATAAAGGACTTGTT 59.001 41.667 0.00 0.00 44.10 2.83
118 119 4.040706 TGTCCAACGGTATAAAGGACTTGT 59.959 41.667 8.24 0.00 46.81 3.16
119 120 4.571919 TGTCCAACGGTATAAAGGACTTG 58.428 43.478 8.24 0.00 46.81 3.16
120 121 4.895668 TGTCCAACGGTATAAAGGACTT 57.104 40.909 8.24 0.00 46.81 3.01
121 122 4.141779 GGATGTCCAACGGTATAAAGGACT 60.142 45.833 8.24 0.00 46.81 3.85
122 123 4.124970 GGATGTCCAACGGTATAAAGGAC 58.875 47.826 0.04 0.04 46.86 3.85
123 124 3.775866 TGGATGTCCAACGGTATAAAGGA 59.224 43.478 0.00 0.00 44.35 3.36
124 125 4.145365 TGGATGTCCAACGGTATAAAGG 57.855 45.455 0.00 0.00 44.35 3.11
139 140 3.021695 CTCAATTGCCTGACATGGATGT 58.978 45.455 0.00 0.00 45.16 3.06
140 141 3.021695 ACTCAATTGCCTGACATGGATG 58.978 45.455 0.00 0.00 0.00 3.51
141 142 3.377253 ACTCAATTGCCTGACATGGAT 57.623 42.857 0.00 0.00 0.00 3.41
142 143 2.885135 ACTCAATTGCCTGACATGGA 57.115 45.000 0.00 0.00 0.00 3.41
143 144 4.218200 TGTTTACTCAATTGCCTGACATGG 59.782 41.667 0.00 0.00 0.00 3.66
144 145 5.181811 TCTGTTTACTCAATTGCCTGACATG 59.818 40.000 0.00 0.00 0.00 3.21
145 146 5.316167 TCTGTTTACTCAATTGCCTGACAT 58.684 37.500 0.00 0.00 0.00 3.06
146 147 4.713553 TCTGTTTACTCAATTGCCTGACA 58.286 39.130 0.00 1.51 0.00 3.58
147 148 4.378874 GCTCTGTTTACTCAATTGCCTGAC 60.379 45.833 0.00 0.00 0.00 3.51
148 149 3.753272 GCTCTGTTTACTCAATTGCCTGA 59.247 43.478 0.00 0.00 0.00 3.86
149 150 3.503363 TGCTCTGTTTACTCAATTGCCTG 59.497 43.478 0.00 0.00 0.00 4.85
150 151 3.754965 TGCTCTGTTTACTCAATTGCCT 58.245 40.909 0.00 0.00 0.00 4.75
151 152 4.708726 ATGCTCTGTTTACTCAATTGCC 57.291 40.909 0.00 0.00 0.00 4.52
152 153 9.604626 GAATATATGCTCTGTTTACTCAATTGC 57.395 33.333 0.00 0.00 0.00 3.56
173 174 9.511272 TGCTTCTGCTTGTGATATTATGAATAT 57.489 29.630 0.00 0.00 40.48 1.28
174 175 8.907222 TGCTTCTGCTTGTGATATTATGAATA 57.093 30.769 0.00 0.00 40.48 1.75
175 176 7.812690 TGCTTCTGCTTGTGATATTATGAAT 57.187 32.000 0.00 0.00 40.48 2.57
176 177 7.812690 ATGCTTCTGCTTGTGATATTATGAA 57.187 32.000 0.00 0.00 40.48 2.57
177 178 7.812690 AATGCTTCTGCTTGTGATATTATGA 57.187 32.000 0.00 0.00 40.48 2.15
178 179 9.955208 TTTAATGCTTCTGCTTGTGATATTATG 57.045 29.630 0.00 0.00 40.48 1.90
179 180 9.956720 GTTTAATGCTTCTGCTTGTGATATTAT 57.043 29.630 0.00 0.00 40.48 1.28
180 181 8.955388 TGTTTAATGCTTCTGCTTGTGATATTA 58.045 29.630 0.00 0.00 40.48 0.98
181 182 7.829725 TGTTTAATGCTTCTGCTTGTGATATT 58.170 30.769 0.00 0.00 40.48 1.28
182 183 7.395190 TGTTTAATGCTTCTGCTTGTGATAT 57.605 32.000 0.00 0.00 40.48 1.63
183 184 6.816134 TGTTTAATGCTTCTGCTTGTGATA 57.184 33.333 0.00 0.00 40.48 2.15
184 185 5.710513 TGTTTAATGCTTCTGCTTGTGAT 57.289 34.783 0.00 0.00 40.48 3.06
185 186 5.512753 TTGTTTAATGCTTCTGCTTGTGA 57.487 34.783 0.00 0.00 40.48 3.58
186 187 4.149396 GCTTGTTTAATGCTTCTGCTTGTG 59.851 41.667 0.00 0.00 40.48 3.33
187 188 4.038402 AGCTTGTTTAATGCTTCTGCTTGT 59.962 37.500 0.00 0.00 40.48 3.16
188 189 4.553323 AGCTTGTTTAATGCTTCTGCTTG 58.447 39.130 0.00 0.00 40.48 4.01
189 190 4.279169 TGAGCTTGTTTAATGCTTCTGCTT 59.721 37.500 0.00 0.00 40.48 3.91
190 191 3.822735 TGAGCTTGTTTAATGCTTCTGCT 59.177 39.130 0.00 0.00 40.48 4.24
191 192 4.164822 TGAGCTTGTTTAATGCTTCTGC 57.835 40.909 0.00 0.00 37.16 4.26
192 193 6.845302 TGTATGAGCTTGTTTAATGCTTCTG 58.155 36.000 0.00 0.00 37.16 3.02
193 194 7.308435 GTTGTATGAGCTTGTTTAATGCTTCT 58.692 34.615 0.00 0.00 37.16 2.85
194 195 6.528072 GGTTGTATGAGCTTGTTTAATGCTTC 59.472 38.462 0.00 0.00 37.16 3.86
195 196 6.015519 TGGTTGTATGAGCTTGTTTAATGCTT 60.016 34.615 0.00 0.00 37.16 3.91
196 197 5.476599 TGGTTGTATGAGCTTGTTTAATGCT 59.523 36.000 0.00 0.00 40.02 3.79
197 198 5.708948 TGGTTGTATGAGCTTGTTTAATGC 58.291 37.500 0.00 0.00 0.00 3.56
198 199 7.814107 ACATTGGTTGTATGAGCTTGTTTAATG 59.186 33.333 0.00 0.00 36.57 1.90
199 200 7.895759 ACATTGGTTGTATGAGCTTGTTTAAT 58.104 30.769 0.00 0.00 36.57 1.40
200 201 7.283625 ACATTGGTTGTATGAGCTTGTTTAA 57.716 32.000 0.00 0.00 36.57 1.52
201 202 6.892658 ACATTGGTTGTATGAGCTTGTTTA 57.107 33.333 0.00 0.00 36.57 2.01
202 203 5.789643 ACATTGGTTGTATGAGCTTGTTT 57.210 34.783 0.00 0.00 36.57 2.83
203 204 6.237901 TCTACATTGGTTGTATGAGCTTGTT 58.762 36.000 0.00 0.00 40.02 2.83
204 205 5.804639 TCTACATTGGTTGTATGAGCTTGT 58.195 37.500 0.00 0.00 40.02 3.16
205 206 5.220739 GCTCTACATTGGTTGTATGAGCTTG 60.221 44.000 18.95 0.00 45.87 4.01
206 207 4.878397 GCTCTACATTGGTTGTATGAGCTT 59.122 41.667 18.95 0.00 45.87 3.74
207 208 4.446371 GCTCTACATTGGTTGTATGAGCT 58.554 43.478 18.95 0.00 45.87 4.09
208 209 4.802876 GCTCTACATTGGTTGTATGAGC 57.197 45.455 15.02 15.02 44.80 4.26
209 210 5.877012 ACTTGCTCTACATTGGTTGTATGAG 59.123 40.000 0.00 0.00 40.02 2.90
210 211 5.804639 ACTTGCTCTACATTGGTTGTATGA 58.195 37.500 0.00 0.00 40.02 2.15
211 212 7.609760 TTACTTGCTCTACATTGGTTGTATG 57.390 36.000 0.00 0.00 40.02 2.39
212 213 9.326413 GTATTACTTGCTCTACATTGGTTGTAT 57.674 33.333 0.00 0.00 40.02 2.29
213 214 7.767198 GGTATTACTTGCTCTACATTGGTTGTA 59.233 37.037 0.00 0.00 39.87 2.41
214 215 6.598064 GGTATTACTTGCTCTACATTGGTTGT 59.402 38.462 0.00 0.00 42.62 3.32
215 216 6.823689 AGGTATTACTTGCTCTACATTGGTTG 59.176 38.462 0.00 0.00 0.00 3.77
216 217 6.958767 AGGTATTACTTGCTCTACATTGGTT 58.041 36.000 0.00 0.00 0.00 3.67
217 218 6.561519 AGGTATTACTTGCTCTACATTGGT 57.438 37.500 0.00 0.00 0.00 3.67
218 219 7.865706 AAAGGTATTACTTGCTCTACATTGG 57.134 36.000 0.00 0.00 0.00 3.16
220 221 9.953565 TGTAAAAGGTATTACTTGCTCTACATT 57.046 29.630 0.00 0.00 36.84 2.71
222 223 9.378551 CATGTAAAAGGTATTACTTGCTCTACA 57.621 33.333 0.00 0.00 35.50 2.74
223 224 9.379791 ACATGTAAAAGGTATTACTTGCTCTAC 57.620 33.333 0.00 0.00 41.23 2.59
224 225 9.378551 CACATGTAAAAGGTATTACTTGCTCTA 57.621 33.333 0.00 0.00 41.23 2.43
225 226 8.100791 TCACATGTAAAAGGTATTACTTGCTCT 58.899 33.333 0.00 0.00 41.23 4.09
226 227 8.263940 TCACATGTAAAAGGTATTACTTGCTC 57.736 34.615 0.00 0.00 41.23 4.26
227 228 8.807948 ATCACATGTAAAAGGTATTACTTGCT 57.192 30.769 0.00 0.72 41.23 3.91
228 229 9.855021 AAATCACATGTAAAAGGTATTACTTGC 57.145 29.630 0.00 0.00 41.23 4.01
363 367 9.941325 CTGAGCCTTAAGAACTCATATAATCAT 57.059 33.333 21.33 0.00 39.57 2.45
393 401 4.574828 GCAAATGGAATCTTACTTAGCCGA 59.425 41.667 0.00 0.00 0.00 5.54
401 409 6.018343 GCTACTCAGAGCAAATGGAATCTTAC 60.018 42.308 0.00 0.00 42.36 2.34
413 421 6.039493 GGTATAGTACAAGCTACTCAGAGCAA 59.961 42.308 0.00 0.00 45.43 3.91
415 423 5.048573 GGGTATAGTACAAGCTACTCAGAGC 60.049 48.000 0.00 0.00 43.19 4.09
416 424 5.179742 CGGGTATAGTACAAGCTACTCAGAG 59.820 48.000 0.00 0.00 0.00 3.35
417 425 5.061853 CGGGTATAGTACAAGCTACTCAGA 58.938 45.833 0.00 0.00 0.00 3.27
418 426 4.320348 GCGGGTATAGTACAAGCTACTCAG 60.320 50.000 0.00 0.00 32.43 3.35
421 429 3.559069 TGCGGGTATAGTACAAGCTACT 58.441 45.455 0.00 0.00 34.94 2.57
422 430 3.996150 TGCGGGTATAGTACAAGCTAC 57.004 47.619 0.00 0.00 34.94 3.58
423 431 5.341872 TTTTGCGGGTATAGTACAAGCTA 57.658 39.130 0.00 0.00 34.94 3.32
424 432 3.899052 TTTGCGGGTATAGTACAAGCT 57.101 42.857 0.00 0.00 34.94 3.74
425 433 4.950434 TTTTTGCGGGTATAGTACAAGC 57.050 40.909 0.00 0.00 34.61 4.01
479 487 2.774799 GCCAGGGCGCCAATAAGTG 61.775 63.158 30.85 14.30 0.00 3.16
555 563 8.270744 AGAATTAAGACCTTCGTCCTAGTAGTA 58.729 37.037 0.00 0.00 40.12 1.82
556 564 7.118060 AGAATTAAGACCTTCGTCCTAGTAGT 58.882 38.462 0.00 0.00 40.12 2.73
591 599 4.094146 CCCGCAAACAAAAATGAACAAGTT 59.906 37.500 0.00 0.00 0.00 2.66
599 607 1.202580 TGGGACCCGCAAACAAAAATG 60.203 47.619 5.91 0.00 0.00 2.32
629 638 2.463047 AGGAGGGAGTACATCAGGTC 57.537 55.000 0.00 0.00 0.00 3.85
637 646 8.151596 CCTTATATTTTGAGAAGGAGGGAGTAC 58.848 40.741 0.00 0.00 40.88 2.73
638 647 7.202102 GCCTTATATTTTGAGAAGGAGGGAGTA 60.202 40.741 3.71 0.00 40.88 2.59
639 648 6.409810 GCCTTATATTTTGAGAAGGAGGGAGT 60.410 42.308 3.71 0.00 40.88 3.85
640 649 6.000840 GCCTTATATTTTGAGAAGGAGGGAG 58.999 44.000 3.71 0.00 40.88 4.30
641 650 5.454755 CGCCTTATATTTTGAGAAGGAGGGA 60.455 44.000 3.71 0.00 40.88 4.20
642 651 4.757149 CGCCTTATATTTTGAGAAGGAGGG 59.243 45.833 3.71 0.00 40.88 4.30
643 652 4.214332 GCGCCTTATATTTTGAGAAGGAGG 59.786 45.833 0.00 0.00 40.88 4.30
644 653 4.084328 CGCGCCTTATATTTTGAGAAGGAG 60.084 45.833 0.00 1.55 40.88 3.69
645 654 3.807622 CGCGCCTTATATTTTGAGAAGGA 59.192 43.478 0.00 0.00 40.88 3.36
646 655 3.807622 TCGCGCCTTATATTTTGAGAAGG 59.192 43.478 0.00 0.00 41.26 3.46
647 656 5.597813 ATCGCGCCTTATATTTTGAGAAG 57.402 39.130 0.00 0.00 0.00 2.85
648 657 5.525745 TCAATCGCGCCTTATATTTTGAGAA 59.474 36.000 0.00 0.00 0.00 2.87
649 658 5.053811 TCAATCGCGCCTTATATTTTGAGA 58.946 37.500 0.00 0.00 0.00 3.27
650 659 5.342806 TCAATCGCGCCTTATATTTTGAG 57.657 39.130 0.00 0.00 0.00 3.02
651 660 5.940192 ATCAATCGCGCCTTATATTTTGA 57.060 34.783 0.00 0.31 0.00 2.69
652 661 6.991485 AAATCAATCGCGCCTTATATTTTG 57.009 33.333 0.00 0.00 0.00 2.44
674 683 4.902443 TGTGCATCAAAGACCGTAAAAA 57.098 36.364 0.00 0.00 0.00 1.94
675 684 4.336993 AGTTGTGCATCAAAGACCGTAAAA 59.663 37.500 0.00 0.00 37.81 1.52
676 685 3.880490 AGTTGTGCATCAAAGACCGTAAA 59.120 39.130 0.00 0.00 37.81 2.01
677 686 3.472652 AGTTGTGCATCAAAGACCGTAA 58.527 40.909 0.00 0.00 37.81 3.18
678 687 3.120321 AGTTGTGCATCAAAGACCGTA 57.880 42.857 0.00 0.00 37.81 4.02
679 688 1.967319 AGTTGTGCATCAAAGACCGT 58.033 45.000 0.00 0.00 37.81 4.83
680 689 3.044986 CAAAGTTGTGCATCAAAGACCG 58.955 45.455 0.00 0.00 37.81 4.79
681 690 4.044426 GTCAAAGTTGTGCATCAAAGACC 58.956 43.478 0.00 0.00 37.81 3.85
682 691 4.044426 GGTCAAAGTTGTGCATCAAAGAC 58.956 43.478 0.00 3.76 37.81 3.01
683 692 3.698539 TGGTCAAAGTTGTGCATCAAAGA 59.301 39.130 0.00 0.00 37.81 2.52
684 693 3.798337 GTGGTCAAAGTTGTGCATCAAAG 59.202 43.478 0.00 0.00 37.81 2.77
685 694 3.446873 AGTGGTCAAAGTTGTGCATCAAA 59.553 39.130 0.00 0.00 37.81 2.69
686 695 3.023119 AGTGGTCAAAGTTGTGCATCAA 58.977 40.909 0.00 0.00 0.00 2.57
687 696 2.653726 AGTGGTCAAAGTTGTGCATCA 58.346 42.857 0.00 0.00 0.00 3.07
688 697 4.829064 TTAGTGGTCAAAGTTGTGCATC 57.171 40.909 0.00 0.00 0.00 3.91
689 698 8.752005 ATATATTAGTGGTCAAAGTTGTGCAT 57.248 30.769 0.00 0.00 0.00 3.96
690 699 9.845740 ATATATATTAGTGGTCAAAGTTGTGCA 57.154 29.630 0.00 0.00 0.00 4.57
726 735 8.558700 CGATGTCATTTATACATGTTCAATCCA 58.441 33.333 2.30 0.59 37.69 3.41
727 736 7.535258 GCGATGTCATTTATACATGTTCAATCC 59.465 37.037 2.30 0.00 37.69 3.01
728 737 8.285394 AGCGATGTCATTTATACATGTTCAATC 58.715 33.333 2.30 0.00 37.69 2.67
729 738 8.071967 CAGCGATGTCATTTATACATGTTCAAT 58.928 33.333 2.30 0.00 37.69 2.57
730 739 7.065683 ACAGCGATGTCATTTATACATGTTCAA 59.934 33.333 2.30 0.00 37.69 2.69
731 740 6.538381 ACAGCGATGTCATTTATACATGTTCA 59.462 34.615 2.30 0.00 37.69 3.18
732 741 6.948353 ACAGCGATGTCATTTATACATGTTC 58.052 36.000 2.30 0.00 37.69 3.18
733 742 6.925610 ACAGCGATGTCATTTATACATGTT 57.074 33.333 2.30 0.00 37.69 2.71
734 743 8.607441 AATACAGCGATGTCATTTATACATGT 57.393 30.769 10.82 2.69 37.69 3.21
735 744 9.321590 CAAATACAGCGATGTCATTTATACATG 57.678 33.333 10.82 0.00 37.69 3.21
736 745 9.056005 ACAAATACAGCGATGTCATTTATACAT 57.944 29.630 10.82 0.00 40.23 2.29
737 746 8.432110 ACAAATACAGCGATGTCATTTATACA 57.568 30.769 10.82 0.00 0.00 2.29
738 747 8.765219 AGACAAATACAGCGATGTCATTTATAC 58.235 33.333 10.82 9.25 43.53 1.47
739 748 8.887036 AGACAAATACAGCGATGTCATTTATA 57.113 30.769 10.82 0.00 43.53 0.98
740 749 7.792374 AGACAAATACAGCGATGTCATTTAT 57.208 32.000 10.82 4.47 43.53 1.40
741 750 7.463544 CAAGACAAATACAGCGATGTCATTTA 58.536 34.615 10.82 0.00 43.53 1.40
742 751 6.317088 CAAGACAAATACAGCGATGTCATTT 58.683 36.000 10.82 11.89 43.53 2.32
743 752 5.674569 GCAAGACAAATACAGCGATGTCATT 60.675 40.000 10.82 3.56 43.53 2.57
744 753 4.201851 GCAAGACAAATACAGCGATGTCAT 60.202 41.667 10.82 0.00 43.53 3.06
745 754 3.125146 GCAAGACAAATACAGCGATGTCA 59.875 43.478 10.82 0.00 43.53 3.58
746 755 3.125146 TGCAAGACAAATACAGCGATGTC 59.875 43.478 10.82 0.00 41.88 3.06
747 756 3.073678 TGCAAGACAAATACAGCGATGT 58.926 40.909 12.53 12.53 0.00 3.06
748 757 3.745332 TGCAAGACAAATACAGCGATG 57.255 42.857 0.00 0.00 0.00 3.84
749 758 4.726416 CTTTGCAAGACAAATACAGCGAT 58.274 39.130 0.00 0.00 46.90 4.58
750 759 3.609175 GCTTTGCAAGACAAATACAGCGA 60.609 43.478 0.00 0.00 46.90 4.93
751 760 2.658325 GCTTTGCAAGACAAATACAGCG 59.342 45.455 0.00 0.00 46.90 5.18
752 761 3.641648 TGCTTTGCAAGACAAATACAGC 58.358 40.909 0.00 2.99 46.90 4.40
823 832 8.132362 TCGTTGCACAACTTTGACTATATTTTT 58.868 29.630 11.44 0.00 39.08 1.94
824 833 7.644490 TCGTTGCACAACTTTGACTATATTTT 58.356 30.769 11.44 0.00 39.08 1.82
825 834 7.197071 TCGTTGCACAACTTTGACTATATTT 57.803 32.000 11.44 0.00 39.08 1.40
826 835 6.795098 TCGTTGCACAACTTTGACTATATT 57.205 33.333 11.44 0.00 39.08 1.28
827 836 6.649141 TCTTCGTTGCACAACTTTGACTATAT 59.351 34.615 11.44 0.00 39.08 0.86
828 837 5.986741 TCTTCGTTGCACAACTTTGACTATA 59.013 36.000 11.44 0.00 39.08 1.31
829 838 4.814234 TCTTCGTTGCACAACTTTGACTAT 59.186 37.500 11.44 0.00 39.08 2.12
830 839 4.185394 TCTTCGTTGCACAACTTTGACTA 58.815 39.130 11.44 0.00 39.08 2.59
831 840 3.006940 TCTTCGTTGCACAACTTTGACT 58.993 40.909 11.44 0.00 39.08 3.41
832 841 3.398954 TCTTCGTTGCACAACTTTGAC 57.601 42.857 11.44 0.00 39.08 3.18
833 842 3.625313 TGATCTTCGTTGCACAACTTTGA 59.375 39.130 11.44 6.77 39.08 2.69
834 843 3.951306 TGATCTTCGTTGCACAACTTTG 58.049 40.909 11.44 2.05 39.08 2.77
835 844 3.876914 TCTGATCTTCGTTGCACAACTTT 59.123 39.130 11.44 0.00 39.08 2.66
836 845 3.466836 TCTGATCTTCGTTGCACAACTT 58.533 40.909 11.44 0.00 39.08 2.66
837 846 3.111853 TCTGATCTTCGTTGCACAACT 57.888 42.857 11.44 0.00 39.08 3.16
838 847 3.878086 TTCTGATCTTCGTTGCACAAC 57.122 42.857 3.37 3.37 37.92 3.32
839 848 4.335315 ACTTTTCTGATCTTCGTTGCACAA 59.665 37.500 0.00 0.00 0.00 3.33
840 849 3.876914 ACTTTTCTGATCTTCGTTGCACA 59.123 39.130 0.00 0.00 0.00 4.57
841 850 4.024893 TGACTTTTCTGATCTTCGTTGCAC 60.025 41.667 0.00 0.00 0.00 4.57
842 851 4.126437 TGACTTTTCTGATCTTCGTTGCA 58.874 39.130 0.00 0.00 0.00 4.08
843 852 4.732285 TGACTTTTCTGATCTTCGTTGC 57.268 40.909 0.00 0.00 0.00 4.17
844 853 5.909610 GGTTTGACTTTTCTGATCTTCGTTG 59.090 40.000 0.00 0.00 0.00 4.10
845 854 5.277345 CGGTTTGACTTTTCTGATCTTCGTT 60.277 40.000 0.00 0.00 0.00 3.85
846 855 4.211374 CGGTTTGACTTTTCTGATCTTCGT 59.789 41.667 0.00 0.00 0.00 3.85
847 856 4.211374 ACGGTTTGACTTTTCTGATCTTCG 59.789 41.667 0.00 0.00 0.00 3.79
848 857 5.444122 CACGGTTTGACTTTTCTGATCTTC 58.556 41.667 0.00 0.00 0.00 2.87
849 858 4.261197 GCACGGTTTGACTTTTCTGATCTT 60.261 41.667 0.00 0.00 0.00 2.40
850 859 3.251004 GCACGGTTTGACTTTTCTGATCT 59.749 43.478 0.00 0.00 0.00 2.75
851 860 3.555518 GCACGGTTTGACTTTTCTGATC 58.444 45.455 0.00 0.00 0.00 2.92
852 861 2.293399 GGCACGGTTTGACTTTTCTGAT 59.707 45.455 0.00 0.00 0.00 2.90
853 862 1.673920 GGCACGGTTTGACTTTTCTGA 59.326 47.619 0.00 0.00 0.00 3.27
854 863 1.676006 AGGCACGGTTTGACTTTTCTG 59.324 47.619 0.00 0.00 43.43 3.02
855 864 2.052782 AGGCACGGTTTGACTTTTCT 57.947 45.000 0.00 0.00 43.43 2.52
861 870 5.099575 CCAAAATATAAGGCACGGTTTGAC 58.900 41.667 0.00 0.00 0.00 3.18
862 871 4.158764 CCCAAAATATAAGGCACGGTTTGA 59.841 41.667 0.00 0.00 0.00 2.69
863 872 4.158764 TCCCAAAATATAAGGCACGGTTTG 59.841 41.667 0.00 0.00 0.00 2.93
864 873 4.345854 TCCCAAAATATAAGGCACGGTTT 58.654 39.130 0.00 0.00 0.00 3.27
865 874 3.970842 TCCCAAAATATAAGGCACGGTT 58.029 40.909 0.00 0.00 0.00 4.44
866 875 3.655615 TCCCAAAATATAAGGCACGGT 57.344 42.857 0.00 0.00 0.00 4.83
867 876 3.317993 CCTTCCCAAAATATAAGGCACGG 59.682 47.826 0.00 0.00 32.66 4.94
868 877 4.204012 TCCTTCCCAAAATATAAGGCACG 58.796 43.478 0.00 0.00 38.70 5.34
869 878 4.584743 CCTCCTTCCCAAAATATAAGGCAC 59.415 45.833 0.00 0.00 38.70 5.01
870 879 4.387437 CCCTCCTTCCCAAAATATAAGGCA 60.387 45.833 0.00 0.00 38.70 4.75
871 880 4.141018 TCCCTCCTTCCCAAAATATAAGGC 60.141 45.833 0.00 0.00 38.70 4.35
872 881 5.134509 ACTCCCTCCTTCCCAAAATATAAGG 59.865 44.000 0.00 0.00 39.93 2.69
873 882 6.267492 ACTCCCTCCTTCCCAAAATATAAG 57.733 41.667 0.00 0.00 0.00 1.73
874 883 6.183361 CGTACTCCCTCCTTCCCAAAATATAA 60.183 42.308 0.00 0.00 0.00 0.98
875 884 5.306160 CGTACTCCCTCCTTCCCAAAATATA 59.694 44.000 0.00 0.00 0.00 0.86
876 885 4.102681 CGTACTCCCTCCTTCCCAAAATAT 59.897 45.833 0.00 0.00 0.00 1.28
877 886 3.453353 CGTACTCCCTCCTTCCCAAAATA 59.547 47.826 0.00 0.00 0.00 1.40
878 887 2.238898 CGTACTCCCTCCTTCCCAAAAT 59.761 50.000 0.00 0.00 0.00 1.82
879 888 1.626825 CGTACTCCCTCCTTCCCAAAA 59.373 52.381 0.00 0.00 0.00 2.44
880 889 1.272807 CGTACTCCCTCCTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
881 890 0.115745 ACGTACTCCCTCCTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
882 891 1.002069 TACGTACTCCCTCCTTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
883 892 1.064091 AGTACGTACTCCCTCCTTCCC 60.064 57.143 22.45 0.00 0.00 3.97
884 893 2.433662 AGTACGTACTCCCTCCTTCC 57.566 55.000 22.45 0.00 0.00 3.46
885 894 6.295249 ACTTATAGTACGTACTCCCTCCTTC 58.705 44.000 30.53 0.00 37.73 3.46
886 895 6.259346 ACTTATAGTACGTACTCCCTCCTT 57.741 41.667 30.53 8.23 37.73 3.36
887 896 5.903198 ACTTATAGTACGTACTCCCTCCT 57.097 43.478 30.53 8.97 37.73 3.69
888 897 6.093357 GCATACTTATAGTACGTACTCCCTCC 59.907 46.154 30.53 8.72 37.73 4.30
889 898 6.652481 TGCATACTTATAGTACGTACTCCCTC 59.348 42.308 30.53 12.00 37.73 4.30
890 899 6.537355 TGCATACTTATAGTACGTACTCCCT 58.463 40.000 30.53 18.48 37.73 4.20
891 900 6.808008 TGCATACTTATAGTACGTACTCCC 57.192 41.667 30.53 10.43 37.73 4.30
892 901 7.961827 GTGATGCATACTTATAGTACGTACTCC 59.038 40.741 30.53 2.17 37.73 3.85
893 902 8.501580 TGTGATGCATACTTATAGTACGTACTC 58.498 37.037 30.53 13.92 37.73 2.59
894 903 8.387190 TGTGATGCATACTTATAGTACGTACT 57.613 34.615 29.62 29.62 40.24 2.73
924 1022 5.570589 GCAGATTTAAGTCAAGAATGTGTGC 59.429 40.000 0.44 0.00 0.00 4.57
932 1030 5.048504 CCTTGCTTGCAGATTTAAGTCAAGA 60.049 40.000 14.30 0.00 38.64 3.02
1050 1157 8.723942 TCTTAAGAGACCAAGCAAAGATTATC 57.276 34.615 0.00 0.00 0.00 1.75
1053 1160 6.072230 GCTTCTTAAGAGACCAAGCAAAGATT 60.072 38.462 17.39 0.00 34.73 2.40
1260 1367 4.314440 GCGCTGGAGACCACCACA 62.314 66.667 0.00 0.00 35.91 4.17
1431 1538 0.321475 GCTTGGCACTCAGAAGCTCT 60.321 55.000 0.00 0.00 39.24 4.09
1443 1550 2.979676 CGCTTCACCTGCTTGGCA 60.980 61.111 0.00 0.00 40.22 4.92
1627 1752 4.697756 CTGGCCCAGTTCGCGGAA 62.698 66.667 6.13 0.00 0.00 4.30
1806 1931 4.742201 CAGCCGACGTGGGAGTGG 62.742 72.222 21.99 1.84 38.63 4.00
1884 2015 3.703921 ACTCTCTGAGGTTAGAGGGAAC 58.296 50.000 9.48 0.00 46.19 3.62
1972 2103 5.836347 TGCATGCAGAGTCTATAACACTAG 58.164 41.667 18.46 0.00 0.00 2.57
1973 2104 5.360999 ACTGCATGCAGAGTCTATAACACTA 59.639 40.000 45.50 8.43 46.30 2.74
1974 2105 4.161189 ACTGCATGCAGAGTCTATAACACT 59.839 41.667 45.50 21.47 46.30 3.55
1975 2106 4.437239 ACTGCATGCAGAGTCTATAACAC 58.563 43.478 45.50 1.68 46.30 3.32
1992 2123 3.005578 TGCTTGCAAATCATGTAACTGCA 59.994 39.130 0.00 9.40 41.06 4.41
1993 2124 3.577667 TGCTTGCAAATCATGTAACTGC 58.422 40.909 0.00 0.00 30.00 4.40
1994 2125 5.118050 CACTTGCTTGCAAATCATGTAACTG 59.882 40.000 15.02 4.86 30.04 3.16
1995 2126 5.224888 CACTTGCTTGCAAATCATGTAACT 58.775 37.500 15.02 0.00 30.04 2.24
2050 2181 7.876068 ACATGAGGAACTTAGTTTCGTAAATGA 59.124 33.333 0.00 0.00 41.55 2.57
2169 2342 7.674120 ACTATGATTGTTCATGATGCTAGCTA 58.326 34.615 17.23 2.58 42.60 3.32
2195 2368 7.295952 AGAACGAACATTATTGAAGCTACTG 57.704 36.000 0.00 0.00 0.00 2.74
2237 2410 7.600375 AGGACGAACATTATTGATGCTACTATG 59.400 37.037 0.00 0.00 39.47 2.23
2359 2536 0.664224 CGGCCGTGTACTTTGGTTTT 59.336 50.000 19.50 0.00 0.00 2.43
2395 2572 1.894978 GCTTTGTAAGGGCCCATTCCA 60.895 52.381 27.56 12.16 0.00 3.53
2402 2579 2.128771 TGATCTGCTTTGTAAGGGCC 57.871 50.000 0.00 0.00 0.00 5.80
2403 2580 4.218417 TCTTTTGATCTGCTTTGTAAGGGC 59.782 41.667 0.00 0.00 0.00 5.19
2429 2606 2.819608 GGCTTGTTCTTGGCTCATGTTA 59.180 45.455 0.00 0.00 0.00 2.41
2430 2607 1.615392 GGCTTGTTCTTGGCTCATGTT 59.385 47.619 0.00 0.00 0.00 2.71
2440 2617 1.692411 GAGGTGTTGGGCTTGTTCTT 58.308 50.000 0.00 0.00 0.00 2.52
2449 2626 2.672996 CCTTGGCGAGGTGTTGGG 60.673 66.667 13.06 0.00 40.95 4.12
2463 2640 2.434774 GGTCTTTGTCCGGGCCTT 59.565 61.111 2.12 0.00 0.00 4.35
2471 2648 3.542046 GAGCTCAGGGGTCTTTGTC 57.458 57.895 9.40 0.00 39.18 3.18
2537 2715 5.984725 TGTCCTTTGTCTGTTCTCAAACTA 58.015 37.500 0.00 0.00 36.30 2.24
2660 2850 7.334858 TGTCACCATGTATGCTTAATCAGTAA 58.665 34.615 0.00 0.00 0.00 2.24
2703 2893 1.202440 TCATAACATACGCCCCGTGAC 60.202 52.381 0.00 0.00 41.39 3.67
2744 2934 1.747355 ACTAATCCGACGGTCAATCGT 59.253 47.619 14.79 2.37 46.83 3.73
3014 3204 4.253685 TCCGAACTTCTATTTGAGCCTTG 58.746 43.478 0.00 0.00 0.00 3.61
3105 3295 3.944087 ACCTAAGCACTTCCTTGATGAC 58.056 45.455 0.00 0.00 0.00 3.06
3256 3446 6.070538 TGGTTTGAAGGTTTCAGGATTTTCAA 60.071 34.615 0.00 0.00 41.38 2.69
3257 3447 5.423610 TGGTTTGAAGGTTTCAGGATTTTCA 59.576 36.000 0.00 0.00 41.38 2.69
3398 3588 5.521906 AGTAGAGAAGATTCGCTAATGCA 57.478 39.130 7.49 0.00 40.43 3.96
3455 3645 6.096987 ACTTCTCGGACATGTCTAATGTGTAT 59.903 38.462 24.50 1.81 31.52 2.29
3677 3875 7.084486 GCACAAAGGAATAGTTAAGAAACCAG 58.916 38.462 0.00 0.00 36.15 4.00
3767 3965 9.517868 AATTAATGAATCAAATTTTTCTGGCCA 57.482 25.926 4.71 4.71 0.00 5.36
3859 4058 1.582502 GTGCGTGTATGTAAGCGTCTC 59.417 52.381 0.00 0.00 0.00 3.36
3887 4086 2.310966 TTGCGTGCGTGCGTTCATA 61.311 52.632 3.11 0.00 37.81 2.15
3889 4088 4.583254 GTTGCGTGCGTGCGTTCA 62.583 61.111 3.11 0.00 37.81 3.18
3890 4089 4.583254 TGTTGCGTGCGTGCGTTC 62.583 61.111 3.11 0.00 37.81 3.95
3902 4105 3.226346 TCGTACTCCATACTGTGTTGC 57.774 47.619 0.00 0.00 0.00 4.17
3910 4113 6.128391 TGCTTGTCAATTTTCGTACTCCATAC 60.128 38.462 0.00 0.00 0.00 2.39
3940 4143 7.385778 TGCAAGTTTTTATCTATACCACCAC 57.614 36.000 0.00 0.00 0.00 4.16
4018 4225 8.969267 GTTCATCTATTACTTCCGTGTTATCTG 58.031 37.037 0.00 0.00 0.00 2.90
4026 4233 6.538742 CCAACATGTTCATCTATTACTTCCGT 59.461 38.462 8.48 0.00 0.00 4.69
4027 4234 6.538742 ACCAACATGTTCATCTATTACTTCCG 59.461 38.462 8.48 0.00 0.00 4.30
4166 4373 6.474751 GTCGATGTCCTACTTACAATTACCAC 59.525 42.308 0.00 0.00 0.00 4.16
4219 4426 1.227883 TAGTTTGCCGGTGCCGAAA 60.228 52.632 12.71 2.88 42.83 3.46
4262 4469 4.394300 GCTTCACAGCATCAACATAGAACT 59.606 41.667 0.00 0.00 46.49 3.01
4284 4491 9.931210 AAATACTCAAATACTTATTACAAGCGC 57.069 29.630 0.00 0.00 0.00 5.92
4365 4573 1.372087 GCTGGATGCCGAAGAGGTTG 61.372 60.000 0.00 0.00 43.70 3.77
4388 4596 3.473923 TGACTTGATGTGAGAGTGCAA 57.526 42.857 0.00 0.00 0.00 4.08
4390 4598 2.676839 CCATGACTTGATGTGAGAGTGC 59.323 50.000 0.00 0.00 0.00 4.40
4485 4693 5.417580 GGTAGGTATGGATGCTGTTTTGAAA 59.582 40.000 0.00 0.00 0.00 2.69
4486 4694 4.947388 GGTAGGTATGGATGCTGTTTTGAA 59.053 41.667 0.00 0.00 0.00 2.69
4493 4701 5.396101 CCATGATAGGTAGGTATGGATGCTG 60.396 48.000 0.00 0.00 40.52 4.41
4497 4705 8.933522 AAATACCATGATAGGTAGGTATGGAT 57.066 34.615 8.42 0.00 46.63 3.41
4498 4706 8.751215 AAAATACCATGATAGGTAGGTATGGA 57.249 34.615 8.42 0.00 46.63 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.