Multiple sequence alignment - TraesCS5B01G511500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G511500 chr5B 100.000 5959 0 0 1 5959 676919907 676925865 0.000000e+00 11005.0
1 TraesCS5B01G511500 chr5B 99.415 171 1 0 3209 3379 469968617 469968447 1.610000e-80 311.0
2 TraesCS5B01G511500 chr5B 89.610 77 3 3 3490 3561 703543028 703542952 6.360000e-15 93.5
3 TraesCS5B01G511500 chr5B 100.000 35 0 0 1865 1899 676921726 676921760 1.390000e-06 65.8
4 TraesCS5B01G511500 chr5B 100.000 35 0 0 1820 1854 676921771 676921805 1.390000e-06 65.8
5 TraesCS5B01G511500 chr5D 92.255 1756 101 17 285 2039 536408843 536410564 0.000000e+00 2457.0
6 TraesCS5B01G511500 chr5D 90.678 1652 84 34 3586 5208 536412463 536414073 0.000000e+00 2134.0
7 TraesCS5B01G511500 chr5D 87.980 1015 41 26 2046 3006 536410772 536411759 0.000000e+00 1123.0
8 TraesCS5B01G511500 chr5D 91.930 285 21 2 5 289 536405920 536406202 1.200000e-106 398.0
9 TraesCS5B01G511500 chr5D 92.342 222 14 2 3381 3600 536412132 536412352 4.480000e-81 313.0
10 TraesCS5B01G511500 chr5D 91.176 204 4 4 3005 3208 536411945 536412134 1.270000e-66 265.0
11 TraesCS5B01G511500 chr5D 77.698 278 46 13 2171 2436 512977230 512976957 8.000000e-34 156.0
12 TraesCS5B01G511500 chr5D 90.909 88 8 0 5337 5424 386689182 386689095 1.050000e-22 119.0
13 TraesCS5B01G511500 chr5D 100.000 35 0 0 1865 1899 536410349 536410383 1.390000e-06 65.8
14 TraesCS5B01G511500 chr5D 100.000 35 0 0 1820 1854 536410394 536410428 1.390000e-06 65.8
15 TraesCS5B01G511500 chr4A 94.509 1111 47 8 958 2060 634847657 634846553 0.000000e+00 1701.0
16 TraesCS5B01G511500 chr4A 87.657 1434 93 25 3816 5208 634845127 634843737 0.000000e+00 1591.0
17 TraesCS5B01G511500 chr4A 87.156 654 56 8 5315 5959 634843286 634842652 0.000000e+00 717.0
18 TraesCS5B01G511500 chr4A 85.491 448 36 17 2662 3101 634845998 634845572 1.970000e-119 440.0
19 TraesCS5B01G511500 chr4A 82.246 552 40 27 2051 2585 634846516 634846006 1.990000e-114 424.0
20 TraesCS5B01G511500 chr4A 100.000 168 0 0 3209 3376 38818670 38818503 1.610000e-80 311.0
21 TraesCS5B01G511500 chr4A 80.556 216 29 10 319 528 634848274 634848066 2.880000e-33 154.0
22 TraesCS5B01G511500 chr4A 77.154 267 45 12 2176 2430 678553675 678553413 2.240000e-29 141.0
23 TraesCS5B01G511500 chr4A 92.683 82 4 2 5345 5425 122051104 122051184 3.770000e-22 117.0
24 TraesCS5B01G511500 chr4A 75.000 268 42 17 2179 2436 117705959 117706211 3.800000e-17 100.0
25 TraesCS5B01G511500 chr4A 100.000 35 0 0 1820 1854 634846747 634846713 1.390000e-06 65.8
26 TraesCS5B01G511500 chr3D 99.435 177 1 0 3209 3385 582579730 582579554 7.450000e-84 322.0
27 TraesCS5B01G511500 chr7B 100.000 172 0 0 3208 3379 73338989 73339160 9.640000e-83 318.0
28 TraesCS5B01G511500 chr7B 89.474 95 10 0 5330 5424 564189673 564189767 2.920000e-23 121.0
29 TraesCS5B01G511500 chr6B 100.000 171 0 0 3209 3379 143748199 143748029 3.470000e-82 316.0
30 TraesCS5B01G511500 chr6B 92.045 88 7 0 5337 5424 5789028 5789115 2.250000e-24 124.0
31 TraesCS5B01G511500 chr6B 83.571 140 13 4 5295 5424 2069508 2069647 8.110000e-24 122.0
32 TraesCS5B01G511500 chr5A 100.000 171 0 0 3209 3379 678206300 678206470 3.470000e-82 316.0
33 TraesCS5B01G511500 chr5A 77.273 264 44 14 2175 2427 700861205 700861463 2.240000e-29 141.0
34 TraesCS5B01G511500 chr5A 89.773 88 9 0 5331 5418 440939616 440939529 4.880000e-21 113.0
35 TraesCS5B01G511500 chr4B 99.419 172 1 0 3209 3380 440928434 440928605 4.480000e-81 313.0
36 TraesCS5B01G511500 chr3B 98.864 176 1 1 3205 3379 225800689 225800514 4.480000e-81 313.0
37 TraesCS5B01G511500 chr3B 77.358 265 40 14 2176 2427 670769256 670769513 8.050000e-29 139.0
38 TraesCS5B01G511500 chrUn 96.491 171 4 1 3209 3379 83394069 83394237 1.260000e-71 281.0
39 TraesCS5B01G511500 chr7A 80.159 252 36 8 2180 2427 138530930 138531171 6.140000e-40 176.0
40 TraesCS5B01G511500 chr7A 85.897 78 11 0 5788 5865 74415821 74415898 3.830000e-12 84.2
41 TraesCS5B01G511500 chr7A 88.889 63 7 0 5787 5849 251743335 251743273 1.780000e-10 78.7
42 TraesCS5B01G511500 chr2B 89.216 102 11 0 5319 5420 740319762 740319863 1.740000e-25 128.0
43 TraesCS5B01G511500 chr2B 75.290 259 50 11 2180 2427 756731009 756731264 1.760000e-20 111.0
44 TraesCS5B01G511500 chr1D 84.328 134 13 5 5295 5420 6176783 6176916 2.250000e-24 124.0
45 TraesCS5B01G511500 chr3A 78.607 201 29 10 4429 4628 128579421 128579608 2.920000e-23 121.0
46 TraesCS5B01G511500 chr2D 89.362 94 10 0 5331 5424 586948679 586948586 1.050000e-22 119.0
47 TraesCS5B01G511500 chr6D 90.361 83 7 1 4556 4637 17828889 17828971 2.270000e-19 108.0
48 TraesCS5B01G511500 chr6A 86.747 83 10 1 4556 4637 18520632 18520550 2.290000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G511500 chr5B 676919907 676925865 5958 False 11005.000000 11005 100.000000 1 5959 1 chr5B.!!$F1 5958
1 TraesCS5B01G511500 chr5D 536405920 536414073 8153 False 852.700000 2457 93.295125 5 5208 8 chr5D.!!$F1 5203
2 TraesCS5B01G511500 chr4A 634842652 634848274 5622 True 727.542857 1701 88.230714 319 5959 7 chr4A.!!$R3 5640

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
293 294 0.035439 GGTGTGGTGGTAGTGGATGG 60.035 60.0 0.00 0.00 0.00 3.51 F
735 3385 0.178932 AGGGGTAGAGTGTGAGTGCA 60.179 55.0 0.00 0.00 0.00 4.57 F
1199 3987 0.584396 GACGACGGCAACAACAATGA 59.416 50.0 0.00 0.00 0.00 2.57 F
1345 4133 1.042559 GCTGCTGCTCTACCCTCTCT 61.043 60.0 8.53 0.00 36.03 3.10 F
3264 6550 0.093026 GCGAACGATACACAGTGTGC 59.907 55.0 23.21 5.31 36.98 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1187 3975 0.038343 ACCGCCATCATTGTTGTTGC 60.038 50.0 0.0 0.0 0.00 4.17 R
2020 4814 0.249911 AGACACGCTTGTTCTCACCC 60.250 55.0 0.0 0.0 35.47 4.61 R
2970 6071 0.179134 CACTGTAGGCGGACTGTAGC 60.179 60.0 0.0 0.0 31.10 3.58 R
3284 6570 0.038744 CATGCAGGAGGGAGTTGGTT 59.961 55.0 0.0 0.0 0.00 3.67 R
5043 8606 0.032130 CACTGTACACCGTCAGCAGT 59.968 55.0 0.0 0.0 40.54 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 5.919300 CTGAAATTACAGTGGCGTCAGCAT 61.919 45.833 0.00 0.00 37.84 3.79
71 72 2.490217 CGACGCCAAGACGGAGAT 59.510 61.111 0.00 0.00 38.12 2.75
72 73 1.874019 CGACGCCAAGACGGAGATG 60.874 63.158 0.00 0.00 38.12 2.90
110 111 1.827399 GAAGGACTTGGCCGTCTCCA 61.827 60.000 13.42 0.00 34.19 3.86
121 122 2.697761 CGTCTCCACGGGTCATCGT 61.698 63.158 0.00 0.00 42.73 3.73
135 136 2.711922 ATCGTCGTGGAGGACAGGC 61.712 63.158 0.00 0.00 36.73 4.85
173 174 0.953471 GTGTTGGGTGCGTGCTATCA 60.953 55.000 0.00 0.00 0.00 2.15
179 180 1.540607 GGTGCGTGCTATCATCGACG 61.541 60.000 0.00 0.00 34.93 5.12
182 183 1.299089 CGTGCTATCATCGACGCCA 60.299 57.895 0.00 0.00 0.00 5.69
289 290 0.249398 GCTAGGTGTGGTGGTAGTGG 59.751 60.000 0.00 0.00 0.00 4.00
290 291 1.933021 CTAGGTGTGGTGGTAGTGGA 58.067 55.000 0.00 0.00 0.00 4.02
292 293 0.984230 AGGTGTGGTGGTAGTGGATG 59.016 55.000 0.00 0.00 0.00 3.51
293 294 0.035439 GGTGTGGTGGTAGTGGATGG 60.035 60.000 0.00 0.00 0.00 3.51
294 295 0.676782 GTGTGGTGGTAGTGGATGGC 60.677 60.000 0.00 0.00 0.00 4.40
362 3007 1.175983 TTGTGGTCCGTTGGATTGCC 61.176 55.000 0.00 0.00 32.73 4.52
374 3019 2.771089 TGGATTGCCGATTAGATCAGC 58.229 47.619 0.00 0.00 36.79 4.26
379 3024 0.598562 GCCGATTAGATCAGCGGAGA 59.401 55.000 13.36 0.00 46.29 3.71
434 3083 1.069513 CGTGAAATAGTCGGCCCCATA 59.930 52.381 0.00 0.00 0.00 2.74
442 3091 6.630203 AATAGTCGGCCCCATATTATTACA 57.370 37.500 0.00 0.00 0.00 2.41
451 3100 5.106436 GCCCCATATTATTACACGGCTTTAC 60.106 44.000 0.00 0.00 32.31 2.01
457 3106 8.757789 CATATTATTACACGGCTTTACGAAAGA 58.242 33.333 10.34 0.00 41.02 2.52
476 3125 6.809196 CGAAAGATAGCAGAGTGTAGAAAAGT 59.191 38.462 0.00 0.00 0.00 2.66
544 3193 6.096673 TGTACTCTTAATGTGAACTGAGCA 57.903 37.500 0.00 0.00 0.00 4.26
552 3201 3.309961 TGTGAACTGAGCAGAGCTAAG 57.690 47.619 4.21 1.79 42.60 2.18
573 3222 5.520748 AGATGATTAGGTTCCTTGTGGTT 57.479 39.130 0.00 0.00 34.23 3.67
596 3245 2.306847 ACCAACACATCAGGGTTCAAC 58.693 47.619 0.00 0.00 0.00 3.18
599 3248 2.169832 ACACATCAGGGTTCAACTCG 57.830 50.000 0.00 0.00 0.00 4.18
652 3302 3.575687 GGATTTATTGGCCTTCCAGGATG 59.424 47.826 3.32 0.00 44.53 3.51
672 3322 2.993539 GCATTTAGCGGGAGGAGAC 58.006 57.895 0.00 0.00 0.00 3.36
677 3327 2.160721 TTAGCGGGAGGAGACATTCT 57.839 50.000 0.00 0.00 0.00 2.40
679 3329 0.324738 AGCGGGAGGAGACATTCTCA 60.325 55.000 5.58 0.00 45.12 3.27
687 3337 5.103290 GAGGAGACATTCTCATCGACTAC 57.897 47.826 5.58 0.00 43.14 2.73
688 3338 4.527944 AGGAGACATTCTCATCGACTACA 58.472 43.478 5.58 0.00 45.12 2.74
703 3353 4.581824 TCGACTACAAAGGCTCGGTATATT 59.418 41.667 0.00 0.00 0.00 1.28
713 3363 3.929610 GGCTCGGTATATTGAAGATGCTC 59.070 47.826 0.00 0.00 0.00 4.26
722 3372 3.414759 TTGAAGATGCTCCTAGGGGTA 57.585 47.619 11.24 6.10 0.00 3.69
728 3378 1.008403 TGCTCCTAGGGGTAGAGTGT 58.992 55.000 11.24 0.00 0.00 3.55
729 3379 1.342076 TGCTCCTAGGGGTAGAGTGTG 60.342 57.143 11.24 0.00 0.00 3.82
730 3380 1.063867 GCTCCTAGGGGTAGAGTGTGA 60.064 57.143 11.24 0.00 0.00 3.58
731 3381 2.938838 CTCCTAGGGGTAGAGTGTGAG 58.061 57.143 9.46 0.00 0.00 3.51
732 3382 2.242708 CTCCTAGGGGTAGAGTGTGAGT 59.757 54.545 9.46 0.00 0.00 3.41
735 3385 0.178932 AGGGGTAGAGTGTGAGTGCA 60.179 55.000 0.00 0.00 0.00 4.57
772 3422 6.720112 AGAGTTAAGTGTATATGCCGGTAA 57.280 37.500 1.90 0.00 0.00 2.85
774 3424 6.323225 AGAGTTAAGTGTATATGCCGGTAAGT 59.677 38.462 1.90 0.00 0.00 2.24
787 3437 3.002348 GCCGGTAAGTGAGCATTTGTATC 59.998 47.826 1.90 0.00 0.00 2.24
950 3738 4.158579 TCACCACATCTCAACACTAGCTAG 59.841 45.833 19.44 19.44 0.00 3.42
951 3739 4.081972 CACCACATCTCAACACTAGCTAGT 60.082 45.833 20.95 20.95 36.90 2.57
952 3740 5.125578 CACCACATCTCAACACTAGCTAGTA 59.874 44.000 25.63 10.08 34.13 1.82
953 3741 5.358442 ACCACATCTCAACACTAGCTAGTAG 59.642 44.000 25.63 18.71 34.13 2.57
954 3742 5.277825 CACATCTCAACACTAGCTAGTAGC 58.722 45.833 25.63 14.62 42.84 3.58
1119 3907 4.379243 ACCGAGAAGCTGCCACCG 62.379 66.667 0.00 0.00 0.00 4.94
1127 3915 2.669569 GCTGCCACCGTCACACAT 60.670 61.111 0.00 0.00 0.00 3.21
1132 3920 3.345011 CACCGTCACACATGCGCA 61.345 61.111 14.96 14.96 0.00 6.09
1199 3987 0.584396 GACGACGGCAACAACAATGA 59.416 50.000 0.00 0.00 0.00 2.57
1204 3992 2.740668 GGCAACAACAATGATGGCG 58.259 52.632 0.00 0.00 43.20 5.69
1207 3995 1.201181 GCAACAACAATGATGGCGGTA 59.799 47.619 0.00 0.00 30.54 4.02
1242 4030 2.426023 GTGTGCGAAGTGGAGGGT 59.574 61.111 0.00 0.00 0.00 4.34
1258 4046 2.821366 GTGGCCTGCTGATGTCCG 60.821 66.667 3.32 0.00 0.00 4.79
1345 4133 1.042559 GCTGCTGCTCTACCCTCTCT 61.043 60.000 8.53 0.00 36.03 3.10
1691 4479 3.827898 CGAGGTGGCGAGGAGGAC 61.828 72.222 0.00 0.00 0.00 3.85
1705 4493 2.360852 GGACGGACGTGGAGGAGA 60.361 66.667 0.53 0.00 0.00 3.71
1904 4695 9.647797 TGTTCTTGAAAATAAGCGAGATAAGTA 57.352 29.630 0.00 0.00 0.00 2.24
2148 5209 6.144402 CGAAAGTGTGCAATTCTAGCAAAATT 59.856 34.615 0.00 0.00 44.64 1.82
2154 5215 7.583762 GTGTGCAATTCTAGCAAAATTTTGTTC 59.416 33.333 27.13 14.64 44.64 3.18
2392 5457 6.360681 TCGAGCTTTACTACGTTTGACTTAAC 59.639 38.462 0.00 0.00 0.00 2.01
2393 5458 6.361748 CGAGCTTTACTACGTTTGACTTAACT 59.638 38.462 0.00 0.00 0.00 2.24
2394 5459 7.404139 AGCTTTACTACGTTTGACTTAACTG 57.596 36.000 0.00 0.00 0.00 3.16
2418 5483 9.869844 CTGAAATCTTATATGCGGACTAAAAAG 57.130 33.333 0.00 0.00 0.00 2.27
2429 5495 4.935808 GCGGACTAAAAAGAAATGGAGAGA 59.064 41.667 0.00 0.00 0.00 3.10
2431 5497 6.072673 GCGGACTAAAAAGAAATGGAGAGAAA 60.073 38.462 0.00 0.00 0.00 2.52
2432 5498 7.522374 CGGACTAAAAAGAAATGGAGAGAAAG 58.478 38.462 0.00 0.00 0.00 2.62
2434 5500 9.503399 GGACTAAAAAGAAATGGAGAGAAAGTA 57.497 33.333 0.00 0.00 0.00 2.24
2436 5502 8.989980 ACTAAAAAGAAATGGAGAGAAAGTACG 58.010 33.333 0.00 0.00 0.00 3.67
2477 5543 2.491693 GTGATGGTTGGGTGTTACATGG 59.508 50.000 0.00 0.00 0.00 3.66
2478 5544 2.109128 TGATGGTTGGGTGTTACATGGT 59.891 45.455 0.00 0.00 0.00 3.55
2479 5545 2.757894 TGGTTGGGTGTTACATGGTT 57.242 45.000 0.00 0.00 0.00 3.67
2480 5546 2.311463 TGGTTGGGTGTTACATGGTTG 58.689 47.619 0.00 0.00 0.00 3.77
2481 5547 2.091830 TGGTTGGGTGTTACATGGTTGA 60.092 45.455 0.00 0.00 0.00 3.18
2482 5548 3.161866 GGTTGGGTGTTACATGGTTGAT 58.838 45.455 0.00 0.00 0.00 2.57
2483 5549 3.056891 GGTTGGGTGTTACATGGTTGATG 60.057 47.826 0.00 0.00 38.15 3.07
2486 5552 2.752903 GGGTGTTACATGGTTGATGGTC 59.247 50.000 0.00 0.00 36.23 4.02
2497 5563 4.523083 TGGTTGATGGTCCTATTGCTTAC 58.477 43.478 0.00 0.00 0.00 2.34
2618 5706 1.887854 GCTAAGGATCGGAGGGAGTAC 59.112 57.143 0.00 0.00 0.00 2.73
2775 5869 6.648192 AGTAGATTTTTCCTGAGTGAGATGG 58.352 40.000 0.00 0.00 0.00 3.51
2804 5898 3.132289 TCCTAGCTAATTCGAGTGGTTGG 59.868 47.826 0.00 0.00 0.00 3.77
2934 6035 1.487976 ACCCTCGATCAGTGATTGCAT 59.512 47.619 14.72 0.00 0.00 3.96
2980 6081 0.747255 ATGCACCTAGCTACAGTCCG 59.253 55.000 0.00 0.00 45.94 4.79
3009 6110 5.578005 GTGTCTGCACAGTATCCTAGTTA 57.422 43.478 0.00 0.00 44.64 2.24
3010 6111 5.583495 GTGTCTGCACAGTATCCTAGTTAG 58.417 45.833 0.00 0.00 44.64 2.34
3011 6112 4.098044 TGTCTGCACAGTATCCTAGTTAGC 59.902 45.833 0.00 0.00 0.00 3.09
3013 6114 5.531659 GTCTGCACAGTATCCTAGTTAGCTA 59.468 44.000 0.00 0.00 0.00 3.32
3014 6115 5.765677 TCTGCACAGTATCCTAGTTAGCTAG 59.234 44.000 6.64 6.64 43.26 3.42
3102 6388 7.329717 CGTCAGCTTTCAAGAGAAAAGTAGTAT 59.670 37.037 0.00 0.00 42.78 2.12
3103 6389 9.640963 GTCAGCTTTCAAGAGAAAAGTAGTATA 57.359 33.333 0.00 0.00 42.78 1.47
3104 6390 9.862371 TCAGCTTTCAAGAGAAAAGTAGTATAG 57.138 33.333 0.00 0.00 42.78 1.31
3105 6391 9.646427 CAGCTTTCAAGAGAAAAGTAGTATAGT 57.354 33.333 0.00 0.00 42.78 2.12
3205 6491 5.215252 ACTATCCCCAACAGTATTCGATG 57.785 43.478 0.00 0.00 0.00 3.84
3206 6492 3.492102 ATCCCCAACAGTATTCGATGG 57.508 47.619 0.00 0.00 0.00 3.51
3207 6493 1.134220 TCCCCAACAGTATTCGATGGC 60.134 52.381 0.00 0.00 0.00 4.40
3208 6494 1.308998 CCCAACAGTATTCGATGGCC 58.691 55.000 0.00 0.00 0.00 5.36
3209 6495 0.937304 CCAACAGTATTCGATGGCCG 59.063 55.000 0.00 0.00 40.25 6.13
3210 6496 1.472552 CCAACAGTATTCGATGGCCGA 60.473 52.381 0.00 0.00 46.94 5.54
3225 6511 3.773117 CCGAAATGGCTTCACACAC 57.227 52.632 0.00 0.00 33.17 3.82
3226 6512 0.110238 CCGAAATGGCTTCACACACG 60.110 55.000 0.00 0.00 33.17 4.49
3227 6513 0.865111 CGAAATGGCTTCACACACGA 59.135 50.000 0.00 0.00 33.17 4.35
3228 6514 1.398451 CGAAATGGCTTCACACACGAC 60.398 52.381 0.00 0.00 33.17 4.34
3229 6515 1.601903 GAAATGGCTTCACACACGACA 59.398 47.619 0.00 0.00 33.86 4.35
3230 6516 0.944386 AATGGCTTCACACACGACAC 59.056 50.000 0.00 0.00 0.00 3.67
3231 6517 1.221466 ATGGCTTCACACACGACACG 61.221 55.000 0.00 0.00 0.00 4.49
3232 6518 2.594962 GGCTTCACACACGACACGG 61.595 63.158 0.00 0.00 0.00 4.94
3233 6519 1.590525 GCTTCACACACGACACGGA 60.591 57.895 0.00 0.00 0.00 4.69
3234 6520 1.818221 GCTTCACACACGACACGGAC 61.818 60.000 0.00 0.00 0.00 4.79
3235 6521 0.248907 CTTCACACACGACACGGACT 60.249 55.000 0.00 0.00 0.00 3.85
3236 6522 0.526739 TTCACACACGACACGGACTG 60.527 55.000 0.00 0.00 0.00 3.51
3237 6523 2.279252 ACACACGACACGGACTGC 60.279 61.111 0.00 0.00 0.00 4.40
3238 6524 2.279186 CACACGACACGGACTGCA 60.279 61.111 0.00 0.00 0.00 4.41
3239 6525 2.279252 ACACGACACGGACTGCAC 60.279 61.111 0.00 0.00 0.00 4.57
3240 6526 3.394874 CACGACACGGACTGCACG 61.395 66.667 0.00 0.00 37.36 5.34
3241 6527 3.588906 ACGACACGGACTGCACGA 61.589 61.111 1.86 0.00 34.93 4.35
3242 6528 2.126463 CGACACGGACTGCACGAT 60.126 61.111 1.86 0.00 34.93 3.73
3243 6529 2.152699 CGACACGGACTGCACGATC 61.153 63.158 1.86 0.00 34.93 3.69
3244 6530 1.213013 GACACGGACTGCACGATCT 59.787 57.895 1.86 0.00 34.93 2.75
3245 6531 1.073216 GACACGGACTGCACGATCTG 61.073 60.000 1.86 0.00 34.93 2.90
3253 6539 3.693245 GCACGATCTGCGAACGAT 58.307 55.556 13.18 0.00 44.57 3.73
3254 6540 2.868020 GCACGATCTGCGAACGATA 58.132 52.632 13.18 0.00 44.57 2.92
3255 6541 0.498927 GCACGATCTGCGAACGATAC 59.501 55.000 13.18 1.69 44.57 2.24
3256 6542 1.822581 CACGATCTGCGAACGATACA 58.177 50.000 13.18 0.00 44.57 2.29
3257 6543 1.513178 CACGATCTGCGAACGATACAC 59.487 52.381 13.18 0.00 44.57 2.90
3258 6544 1.131693 ACGATCTGCGAACGATACACA 59.868 47.619 13.18 0.00 44.57 3.72
3259 6545 1.775770 CGATCTGCGAACGATACACAG 59.224 52.381 0.00 0.00 44.57 3.66
3260 6546 2.791503 CGATCTGCGAACGATACACAGT 60.792 50.000 0.00 0.00 44.57 3.55
3261 6547 1.977188 TCTGCGAACGATACACAGTG 58.023 50.000 0.00 0.00 0.00 3.66
3262 6548 1.268625 TCTGCGAACGATACACAGTGT 59.731 47.619 11.87 11.87 0.00 3.55
3263 6549 1.386748 CTGCGAACGATACACAGTGTG 59.613 52.381 21.77 21.77 39.75 3.82
3264 6550 0.093026 GCGAACGATACACAGTGTGC 59.907 55.000 23.21 5.31 36.98 4.57
3265 6551 1.414378 CGAACGATACACAGTGTGCA 58.586 50.000 23.21 11.32 36.98 4.57
3266 6552 1.992667 CGAACGATACACAGTGTGCAT 59.007 47.619 23.21 16.15 36.98 3.96
3267 6553 2.222574 CGAACGATACACAGTGTGCATG 60.223 50.000 23.21 12.69 36.98 4.06
3268 6554 1.078709 ACGATACACAGTGTGCATGC 58.921 50.000 23.21 11.82 36.98 4.06
3269 6555 1.077915 CGATACACAGTGTGCATGCA 58.922 50.000 23.21 18.46 36.98 3.96
3270 6556 1.667212 CGATACACAGTGTGCATGCAT 59.333 47.619 25.64 8.42 36.98 3.96
3271 6557 2.286008 CGATACACAGTGTGCATGCATC 60.286 50.000 25.64 19.32 36.98 3.91
3272 6558 2.181954 TACACAGTGTGCATGCATCA 57.818 45.000 25.64 19.84 36.98 3.07
3273 6559 0.879090 ACACAGTGTGCATGCATCAG 59.121 50.000 25.64 18.14 36.98 2.90
3274 6560 0.456142 CACAGTGTGCATGCATCAGC 60.456 55.000 25.64 11.56 42.57 4.26
3275 6561 1.226295 CAGTGTGCATGCATCAGCG 60.226 57.895 25.64 12.70 46.23 5.18
3276 6562 2.101575 GTGTGCATGCATCAGCGG 59.898 61.111 25.64 0.00 46.23 5.52
3277 6563 2.046120 TGTGCATGCATCAGCGGA 60.046 55.556 25.64 0.00 46.23 5.54
3278 6564 2.400962 TGTGCATGCATCAGCGGAC 61.401 57.895 25.64 8.75 46.23 4.79
3279 6565 2.046120 TGCATGCATCAGCGGACA 60.046 55.556 18.46 0.00 46.23 4.02
3280 6566 2.110352 TGCATGCATCAGCGGACAG 61.110 57.895 18.46 0.00 46.23 3.51
3281 6567 1.816679 GCATGCATCAGCGGACAGA 60.817 57.895 14.21 0.00 46.23 3.41
3282 6568 1.371337 GCATGCATCAGCGGACAGAA 61.371 55.000 14.21 0.00 46.23 3.02
3283 6569 1.089112 CATGCATCAGCGGACAGAAA 58.911 50.000 0.00 0.00 46.23 2.52
3284 6570 1.469703 CATGCATCAGCGGACAGAAAA 59.530 47.619 0.00 0.00 46.23 2.29
3285 6571 1.603456 TGCATCAGCGGACAGAAAAA 58.397 45.000 0.00 0.00 46.23 1.94
3286 6572 1.266718 TGCATCAGCGGACAGAAAAAC 59.733 47.619 0.00 0.00 46.23 2.43
3287 6573 1.401539 GCATCAGCGGACAGAAAAACC 60.402 52.381 0.00 0.00 0.00 3.27
3288 6574 1.879380 CATCAGCGGACAGAAAAACCA 59.121 47.619 0.00 0.00 0.00 3.67
3289 6575 2.045561 TCAGCGGACAGAAAAACCAA 57.954 45.000 0.00 0.00 0.00 3.67
3290 6576 1.673920 TCAGCGGACAGAAAAACCAAC 59.326 47.619 0.00 0.00 0.00 3.77
3291 6577 1.676006 CAGCGGACAGAAAAACCAACT 59.324 47.619 0.00 0.00 0.00 3.16
3292 6578 1.947456 AGCGGACAGAAAAACCAACTC 59.053 47.619 0.00 0.00 0.00 3.01
3293 6579 1.001706 GCGGACAGAAAAACCAACTCC 60.002 52.381 0.00 0.00 0.00 3.85
3294 6580 1.607148 CGGACAGAAAAACCAACTCCC 59.393 52.381 0.00 0.00 0.00 4.30
3295 6581 2.748465 CGGACAGAAAAACCAACTCCCT 60.748 50.000 0.00 0.00 0.00 4.20
3296 6582 2.885266 GGACAGAAAAACCAACTCCCTC 59.115 50.000 0.00 0.00 0.00 4.30
3297 6583 2.885266 GACAGAAAAACCAACTCCCTCC 59.115 50.000 0.00 0.00 0.00 4.30
3298 6584 2.514160 ACAGAAAAACCAACTCCCTCCT 59.486 45.455 0.00 0.00 0.00 3.69
3299 6585 2.887152 CAGAAAAACCAACTCCCTCCTG 59.113 50.000 0.00 0.00 0.00 3.86
3300 6586 1.613925 GAAAAACCAACTCCCTCCTGC 59.386 52.381 0.00 0.00 0.00 4.85
3301 6587 0.555769 AAAACCAACTCCCTCCTGCA 59.444 50.000 0.00 0.00 0.00 4.41
3302 6588 0.779997 AAACCAACTCCCTCCTGCAT 59.220 50.000 0.00 0.00 0.00 3.96
3303 6589 0.038744 AACCAACTCCCTCCTGCATG 59.961 55.000 0.00 0.00 0.00 4.06
3304 6590 1.136329 ACCAACTCCCTCCTGCATGT 61.136 55.000 0.00 0.00 0.00 3.21
3305 6591 0.911769 CCAACTCCCTCCTGCATGTA 59.088 55.000 0.00 0.00 0.00 2.29
3306 6592 1.407437 CCAACTCCCTCCTGCATGTAC 60.407 57.143 0.00 0.00 0.00 2.90
3307 6593 0.537188 AACTCCCTCCTGCATGTACG 59.463 55.000 0.00 0.00 0.00 3.67
3308 6594 0.614979 ACTCCCTCCTGCATGTACGT 60.615 55.000 0.00 0.00 0.00 3.57
3309 6595 0.179100 CTCCCTCCTGCATGTACGTG 60.179 60.000 10.89 10.89 0.00 4.49
3310 6596 1.815421 CCCTCCTGCATGTACGTGC 60.815 63.158 29.29 29.29 45.25 5.34
3316 6602 3.490759 GCATGTACGTGCGCTGCT 61.491 61.111 23.44 0.00 35.10 4.24
3317 6603 2.396861 CATGTACGTGCGCTGCTG 59.603 61.111 9.73 0.00 0.00 4.41
3318 6604 2.048222 ATGTACGTGCGCTGCTGT 60.048 55.556 9.73 4.21 0.00 4.40
3319 6605 2.382746 ATGTACGTGCGCTGCTGTG 61.383 57.895 9.73 0.00 0.00 3.66
3333 6619 2.765279 TGTGCTGCCACATGGGAT 59.235 55.556 0.00 0.00 46.51 3.85
3334 6620 1.378911 TGTGCTGCCACATGGGATC 60.379 57.895 0.00 0.00 46.51 3.36
3335 6621 2.124612 TGCTGCCACATGGGATCG 60.125 61.111 0.00 0.00 40.01 3.69
3336 6622 2.124570 GCTGCCACATGGGATCGT 60.125 61.111 0.00 0.00 40.01 3.73
3337 6623 2.475466 GCTGCCACATGGGATCGTG 61.475 63.158 0.00 0.00 40.01 4.35
3338 6624 2.438254 TGCCACATGGGATCGTGC 60.438 61.111 0.00 0.00 40.01 5.34
3339 6625 2.438254 GCCACATGGGATCGTGCA 60.438 61.111 0.00 0.00 40.01 4.57
3340 6626 2.764314 GCCACATGGGATCGTGCAC 61.764 63.158 6.82 6.82 40.01 4.57
3341 6627 1.377072 CCACATGGGATCGTGCACA 60.377 57.895 18.64 4.45 40.01 4.57
3342 6628 1.647545 CCACATGGGATCGTGCACAC 61.648 60.000 18.64 7.37 40.01 3.82
3352 6638 4.961511 GTGCACACGTCGGCTGGA 62.962 66.667 13.17 0.00 0.00 3.86
3353 6639 4.662961 TGCACACGTCGGCTGGAG 62.663 66.667 9.15 0.00 0.00 3.86
3354 6640 4.664677 GCACACGTCGGCTGGAGT 62.665 66.667 0.00 0.00 0.00 3.85
3355 6641 2.029073 CACACGTCGGCTGGAGTT 59.971 61.111 0.00 0.00 0.00 3.01
3356 6642 1.594293 CACACGTCGGCTGGAGTTT 60.594 57.895 0.00 0.00 0.00 2.66
3357 6643 1.300697 ACACGTCGGCTGGAGTTTC 60.301 57.895 0.00 0.00 0.00 2.78
3358 6644 1.300620 CACGTCGGCTGGAGTTTCA 60.301 57.895 0.00 0.00 0.00 2.69
3359 6645 0.670546 CACGTCGGCTGGAGTTTCAT 60.671 55.000 0.00 0.00 0.00 2.57
3360 6646 0.389948 ACGTCGGCTGGAGTTTCATC 60.390 55.000 0.00 0.00 0.00 2.92
3361 6647 1.413767 CGTCGGCTGGAGTTTCATCG 61.414 60.000 0.00 0.00 0.00 3.84
3362 6648 0.389948 GTCGGCTGGAGTTTCATCGT 60.390 55.000 0.00 0.00 0.00 3.73
3363 6649 0.389817 TCGGCTGGAGTTTCATCGTG 60.390 55.000 0.00 0.00 0.00 4.35
3364 6650 0.670546 CGGCTGGAGTTTCATCGTGT 60.671 55.000 0.00 0.00 0.00 4.49
3365 6651 0.798776 GGCTGGAGTTTCATCGTGTG 59.201 55.000 0.00 0.00 0.00 3.82
3366 6652 1.512926 GCTGGAGTTTCATCGTGTGT 58.487 50.000 0.00 0.00 0.00 3.72
3367 6653 2.611971 GGCTGGAGTTTCATCGTGTGTA 60.612 50.000 0.00 0.00 0.00 2.90
3368 6654 3.262420 GCTGGAGTTTCATCGTGTGTAT 58.738 45.455 0.00 0.00 0.00 2.29
3369 6655 4.430007 GCTGGAGTTTCATCGTGTGTATA 58.570 43.478 0.00 0.00 0.00 1.47
3370 6656 4.504461 GCTGGAGTTTCATCGTGTGTATAG 59.496 45.833 0.00 0.00 0.00 1.31
3371 6657 4.430007 TGGAGTTTCATCGTGTGTATAGC 58.570 43.478 0.00 0.00 0.00 2.97
3372 6658 4.081917 TGGAGTTTCATCGTGTGTATAGCA 60.082 41.667 0.00 0.00 0.00 3.49
3373 6659 5.050490 GGAGTTTCATCGTGTGTATAGCAT 58.950 41.667 0.00 0.00 0.00 3.79
3374 6660 5.175856 GGAGTTTCATCGTGTGTATAGCATC 59.824 44.000 0.00 0.00 0.00 3.91
3375 6661 4.740205 AGTTTCATCGTGTGTATAGCATCG 59.260 41.667 0.00 0.00 0.00 3.84
3376 6662 2.661594 TCATCGTGTGTATAGCATCGC 58.338 47.619 0.00 0.00 0.00 4.58
3377 6663 2.293399 TCATCGTGTGTATAGCATCGCT 59.707 45.455 0.00 0.00 43.41 4.93
3378 6664 2.401017 TCGTGTGTATAGCATCGCTC 57.599 50.000 0.00 0.00 40.44 5.03
3379 6665 1.045477 CGTGTGTATAGCATCGCTCG 58.955 55.000 0.00 0.00 40.44 5.03
3408 6694 1.764571 TACTGGCCAGTTCAACGCCT 61.765 55.000 41.69 17.47 43.42 5.52
3413 6699 2.325082 CCAGTTCAACGCCTTCCGG 61.325 63.158 0.00 0.00 42.52 5.14
3416 6702 2.033194 GTTCAACGCCTTCCGGGAG 61.033 63.158 1.30 1.30 42.52 4.30
3418 6704 1.550130 TTCAACGCCTTCCGGGAGAT 61.550 55.000 12.85 0.00 42.52 2.75
3426 6712 1.133637 CCTTCCGGGAGATGAGAGAGA 60.134 57.143 12.85 0.00 37.23 3.10
3428 6714 3.245087 CCTTCCGGGAGATGAGAGAGATA 60.245 52.174 12.85 0.00 37.23 1.98
3454 6740 7.999545 AGTCCTATGTTACTATCTTGAGCAGTA 59.000 37.037 0.00 0.00 0.00 2.74
3482 6768 6.487331 CGATAGGTAGAGATACTGTCCAGTTT 59.513 42.308 5.10 0.00 42.54 2.66
3483 6769 5.923733 AGGTAGAGATACTGTCCAGTTTG 57.076 43.478 5.10 0.00 42.54 2.93
3523 6817 6.486056 TGAGAGAGATGGTTCTAGTAACACT 58.514 40.000 0.00 0.00 30.30 3.55
3613 7036 9.971744 TTACGCAATGATATGATCAAATATTCG 57.028 29.630 0.00 7.32 43.50 3.34
3627 7050 9.704098 GATCAAATATTCGGTGAAAAAGTAGAC 57.296 33.333 0.00 0.00 0.00 2.59
3632 7055 9.449719 AATATTCGGTGAAAAAGTAGACAGAAT 57.550 29.630 0.00 0.00 37.16 2.40
3663 7139 8.575454 GTTCGTCATCTTATGCATTTTAAACAC 58.425 33.333 3.54 0.00 0.00 3.32
3718 7205 5.541845 TCTATGAACTTGTGAGAAGGTGTG 58.458 41.667 0.00 0.00 0.00 3.82
3719 7206 2.288666 TGAACTTGTGAGAAGGTGTGC 58.711 47.619 0.00 0.00 0.00 4.57
3722 7218 0.890996 CTTGTGAGAAGGTGTGCCCC 60.891 60.000 0.00 0.00 34.57 5.80
3723 7219 1.352622 TTGTGAGAAGGTGTGCCCCT 61.353 55.000 0.00 0.00 35.96 4.79
3728 7224 2.378547 TGAGAAGGTGTGCCCCTAAATT 59.621 45.455 0.00 0.00 33.33 1.82
3729 7225 3.589735 TGAGAAGGTGTGCCCCTAAATTA 59.410 43.478 0.00 0.00 33.33 1.40
3754 7278 2.378507 CATGCACGCATGTACATCTG 57.621 50.000 21.25 3.81 46.20 2.90
3755 7279 1.935199 CATGCACGCATGTACATCTGA 59.065 47.619 21.25 0.00 46.20 3.27
3812 7338 3.432326 GCCGGGTGGATCTAATCATATCC 60.432 52.174 2.18 0.00 41.81 2.59
3936 7469 2.365582 ACATCCTGGCCGTTGATTAAC 58.634 47.619 0.00 0.00 0.00 2.01
3959 7492 8.893219 AACTCGAGCATATCTTCAATATTTCA 57.107 30.769 13.61 0.00 0.00 2.69
4058 7621 1.977056 CATGCATGCAGGAGGTGTAT 58.023 50.000 27.49 2.15 30.27 2.29
4235 7798 2.510691 CTCCGCACCGCCGTATTT 60.511 61.111 0.00 0.00 0.00 1.40
4238 7801 2.701006 CGCACCGCCGTATTTCTG 59.299 61.111 0.00 0.00 0.00 3.02
4241 7804 1.644786 GCACCGCCGTATTTCTGCTT 61.645 55.000 0.00 0.00 0.00 3.91
4247 7810 1.571919 CCGTATTTCTGCTTCTCCCG 58.428 55.000 0.00 0.00 0.00 5.14
4253 7816 1.338107 TTCTGCTTCTCCCGTTCTCA 58.662 50.000 0.00 0.00 0.00 3.27
4259 7822 2.442413 CTTCTCCCGTTCTCACTCTCT 58.558 52.381 0.00 0.00 0.00 3.10
4760 8323 4.789075 CCCGTGCCGTCGTACCTG 62.789 72.222 0.00 0.00 0.00 4.00
4767 8330 2.632544 CCGTCGTACCTGGTGCAGA 61.633 63.158 15.31 9.98 32.44 4.26
4774 8337 1.676678 TACCTGGTGCAGATCCTCGC 61.677 60.000 10.23 0.00 32.44 5.03
4781 8344 4.227134 CAGATCCTCGCCCCCGTG 62.227 72.222 0.00 0.00 35.54 4.94
4998 8561 4.529446 GCAGTCTACTATTGACGACTAGC 58.471 47.826 0.00 0.00 39.24 3.42
4999 8562 4.035324 GCAGTCTACTATTGACGACTAGCA 59.965 45.833 0.00 0.00 39.24 3.49
5007 8570 3.586100 TTGACGACTAGCAGTGCAATA 57.414 42.857 19.20 0.37 0.00 1.90
5016 8579 5.892568 ACTAGCAGTGCAATACAGTACTAC 58.107 41.667 19.20 0.00 32.49 2.73
5018 8581 5.147330 AGCAGTGCAATACAGTACTACAA 57.853 39.130 19.20 0.00 32.49 2.41
5019 8582 4.929808 AGCAGTGCAATACAGTACTACAAC 59.070 41.667 19.20 0.00 32.49 3.32
5020 8583 4.929808 GCAGTGCAATACAGTACTACAACT 59.070 41.667 11.09 0.00 32.49 3.16
5022 8585 6.034683 GCAGTGCAATACAGTACTACAACTAC 59.965 42.308 11.09 0.00 32.49 2.73
5024 8587 6.149973 AGTGCAATACAGTACTACAACTACGA 59.850 38.462 0.00 0.00 32.49 3.43
5025 8588 6.803320 GTGCAATACAGTACTACAACTACGAA 59.197 38.462 0.00 0.00 0.00 3.85
5026 8589 7.008086 GTGCAATACAGTACTACAACTACGAAG 59.992 40.741 0.00 0.00 0.00 3.79
5027 8590 6.020837 GCAATACAGTACTACAACTACGAAGC 60.021 42.308 0.00 0.00 0.00 3.86
5028 8591 6.998968 ATACAGTACTACAACTACGAAGCT 57.001 37.500 0.00 0.00 0.00 3.74
5029 8592 8.393366 CAATACAGTACTACAACTACGAAGCTA 58.607 37.037 0.00 0.00 0.00 3.32
5030 8593 6.419980 ACAGTACTACAACTACGAAGCTAG 57.580 41.667 0.00 0.00 0.00 3.42
5031 8594 5.163774 ACAGTACTACAACTACGAAGCTAGC 60.164 44.000 6.62 6.62 0.00 3.42
5032 8595 3.779271 ACTACAACTACGAAGCTAGCC 57.221 47.619 12.13 0.00 0.00 3.93
5043 8606 2.047274 GCTAGCCGCTTGTGGTCA 60.047 61.111 2.29 0.00 35.14 4.02
5051 8614 1.835483 CGCTTGTGGTCACTGCTGAC 61.835 60.000 0.00 0.00 45.54 3.51
5064 8628 2.372690 GCTGACGGTGTACAGTGCG 61.373 63.158 0.00 0.00 36.62 5.34
5066 8630 1.275471 CTGACGGTGTACAGTGCGTG 61.275 60.000 0.00 0.00 0.00 5.34
5067 8631 2.654912 GACGGTGTACAGTGCGTGC 61.655 63.158 0.00 0.00 0.00 5.34
5068 8632 2.660224 CGGTGTACAGTGCGTGCA 60.660 61.111 0.00 0.00 37.96 4.57
5069 8633 2.027073 CGGTGTACAGTGCGTGCAT 61.027 57.895 0.00 0.00 42.56 3.96
5070 8634 0.734597 CGGTGTACAGTGCGTGCATA 60.735 55.000 0.00 0.00 42.56 3.14
5071 8635 0.719465 GGTGTACAGTGCGTGCATAC 59.281 55.000 0.00 0.00 42.56 2.39
5082 8647 2.125713 TGCATACGCGTGTCCTGG 60.126 61.111 24.59 4.12 42.97 4.45
5098 8663 2.447244 CTGGCTCGTCAGGGATTATC 57.553 55.000 0.00 0.00 0.00 1.75
5112 8677 2.561569 GATTATCTGTGTTGTCCGGGG 58.438 52.381 0.00 0.00 0.00 5.73
5197 8770 3.721035 ACAGAGGTTTTGCTTGATTTGC 58.279 40.909 0.00 0.00 0.00 3.68
5218 8961 1.821216 TTTTTGGATCTGGCGTCTCC 58.179 50.000 0.00 0.00 0.00 3.71
5228 8971 0.968901 TGGCGTCTCCCGTGATTAGT 60.969 55.000 0.00 0.00 39.32 2.24
5238 8981 3.116300 CCCGTGATTAGTCAGACAATCG 58.884 50.000 2.66 2.56 34.36 3.34
5265 9018 5.408356 ACTCTTGAAATTTGCATGCATCTC 58.592 37.500 23.37 15.30 0.00 2.75
5267 9020 5.647589 TCTTGAAATTTGCATGCATCTCTC 58.352 37.500 23.37 15.99 0.00 3.20
5285 9038 5.871465 CTCTCAAAGAGAAAACTAAGGGC 57.129 43.478 0.00 0.00 45.07 5.19
5299 9052 4.208686 GGGCGTGGCTAGGTCTCG 62.209 72.222 0.00 0.00 0.00 4.04
5301 9054 3.450115 GCGTGGCTAGGTCTCGGT 61.450 66.667 0.00 0.00 0.00 4.69
5313 9066 5.335035 GCTAGGTCTCGGTCAAGTGATATAC 60.335 48.000 0.00 0.00 0.00 1.47
5373 9291 7.444629 TCATGCAAGATCAAAGGAATATAGC 57.555 36.000 0.00 0.00 0.00 2.97
5379 9297 7.623089 GCAAGATCAAAGGAATATAGCATCGAC 60.623 40.741 0.00 0.00 0.00 4.20
5381 9299 8.354711 AGATCAAAGGAATATAGCATCGACTA 57.645 34.615 0.00 0.00 0.00 2.59
5395 9313 5.066117 AGCATCGACTAAGACATAACGAAGA 59.934 40.000 0.00 0.00 33.77 2.87
5396 9314 5.171695 GCATCGACTAAGACATAACGAAGAC 59.828 44.000 0.00 0.00 33.77 3.01
5397 9315 6.487960 CATCGACTAAGACATAACGAAGACT 58.512 40.000 0.00 0.00 33.77 3.24
5398 9316 6.104439 TCGACTAAGACATAACGAAGACTC 57.896 41.667 0.00 0.00 0.00 3.36
5399 9317 5.640783 TCGACTAAGACATAACGAAGACTCA 59.359 40.000 0.00 0.00 0.00 3.41
5400 9318 5.960683 CGACTAAGACATAACGAAGACTCAG 59.039 44.000 0.00 0.00 0.00 3.35
5401 9319 6.402334 CGACTAAGACATAACGAAGACTCAGT 60.402 42.308 0.00 0.00 0.00 3.41
5402 9320 6.844254 ACTAAGACATAACGAAGACTCAGTC 58.156 40.000 0.00 0.00 0.00 3.51
5403 9321 4.343811 AGACATAACGAAGACTCAGTCG 57.656 45.455 0.00 0.00 42.91 4.18
5404 9322 4.001652 AGACATAACGAAGACTCAGTCGA 58.998 43.478 0.00 0.00 39.64 4.20
5405 9323 4.080969 ACATAACGAAGACTCAGTCGAC 57.919 45.455 7.70 7.70 39.64 4.20
5406 9324 3.752222 ACATAACGAAGACTCAGTCGACT 59.248 43.478 13.58 13.58 39.64 4.18
5407 9325 2.690173 AACGAAGACTCAGTCGACTG 57.310 50.000 34.76 34.76 45.08 3.51
5424 9342 3.612717 CGACTGAGACTTAGCAAAGCTGA 60.613 47.826 1.04 0.00 40.10 4.26
5438 9356 9.539825 TTAGCAAAGCTGAAAAACAAAATATCA 57.460 25.926 1.04 0.00 40.10 2.15
5506 9424 2.037772 CCCTCCGTCCTCAAATAGATGG 59.962 54.545 0.00 0.00 40.04 3.51
5508 9426 2.103094 CTCCGTCCTCAAATAGATGGCA 59.897 50.000 0.00 0.00 38.78 4.92
5516 9434 8.607459 CGTCCTCAAATAGATGGCATATAAATC 58.393 37.037 5.85 0.00 0.00 2.17
5547 9465 9.848172 CAAAAAGTCAATGTTTTCTAAATTCGG 57.152 29.630 0.00 0.00 0.00 4.30
5565 9483 7.466746 AATTCGGCCAAGCATATATACAAAT 57.533 32.000 2.24 0.00 0.00 2.32
5672 9590 6.642733 TGATATTTTTCTTCACCTCCCTCT 57.357 37.500 0.00 0.00 0.00 3.69
5673 9591 7.032598 TGATATTTTTCTTCACCTCCCTCTT 57.967 36.000 0.00 0.00 0.00 2.85
5753 9678 3.826157 AGTTATGGCTAGCTTGCAAAACA 59.174 39.130 21.53 10.51 34.04 2.83
5775 9700 5.104900 ACAGTCTTATATTGTGGGACAGACC 60.105 44.000 0.00 0.00 41.80 3.85
5785 9710 1.304217 GGACAGACCGACAGAGGGA 60.304 63.158 0.00 0.00 35.02 4.20
5791 9716 2.879646 CAGACCGACAGAGGGAGTATAC 59.120 54.545 0.00 0.00 35.02 1.47
5816 9741 7.439056 ACATTTGGTCAAACTTAGAAAGCATTG 59.561 33.333 0.00 0.00 32.51 2.82
5822 9747 6.479990 GTCAAACTTAGAAAGCATTGCCTTTT 59.520 34.615 4.70 0.00 35.31 2.27
5825 9750 8.825745 CAAACTTAGAAAGCATTGCCTTTTTAA 58.174 29.630 4.70 9.68 35.31 1.52
5827 9752 7.726216 ACTTAGAAAGCATTGCCTTTTTAACT 58.274 30.769 4.70 2.46 35.31 2.24
5828 9753 7.653311 ACTTAGAAAGCATTGCCTTTTTAACTG 59.347 33.333 4.70 4.23 35.31 3.16
5838 9763 9.353999 CATTGCCTTTTTAACTGAGTTTATACC 57.646 33.333 1.97 0.00 0.00 2.73
5852 9777 8.331931 TGAGTTTATACCTCATCTATTTGGGT 57.668 34.615 0.00 0.00 34.12 4.51
5859 9784 4.164988 ACCTCATCTATTTGGGTTCAGAGG 59.835 45.833 0.00 0.00 44.28 3.69
5880 9805 4.140423 AGGGAGTAGTCCATATAAAGGGCT 60.140 45.833 18.49 6.88 46.07 5.19
5912 9837 8.703604 TTGATTTGTAGTACTAATCTCTGTGC 57.296 34.615 26.81 9.65 39.77 4.57
5941 9866 3.851128 GCTAGTGAGGCGGGACCC 61.851 72.222 0.00 0.00 40.58 4.46
5956 9881 2.648059 GGACCCAGACTGATTGGATTG 58.352 52.381 3.32 0.00 37.96 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 2.677836 TCTCATAAAATGCTGACGCCAC 59.322 45.455 0.00 0.00 34.43 5.01
27 28 6.114187 TGCCTTCTTCTCACTCTCATAAAA 57.886 37.500 0.00 0.00 0.00 1.52
31 32 3.055240 CCTTGCCTTCTTCTCACTCTCAT 60.055 47.826 0.00 0.00 0.00 2.90
84 85 0.972471 GGCCAAGTCCTTCCCCATTG 60.972 60.000 0.00 0.00 0.00 2.82
85 86 1.388133 GGCCAAGTCCTTCCCCATT 59.612 57.895 0.00 0.00 0.00 3.16
110 111 2.674033 TCCACGACGATGACCCGT 60.674 61.111 0.00 0.00 46.43 5.28
113 114 1.139095 GTCCTCCACGACGATGACC 59.861 63.158 0.00 0.00 0.00 4.02
173 174 2.367567 ACCCACTATTAATGGCGTCGAT 59.632 45.455 0.00 0.00 35.74 3.59
179 180 3.222603 CCTCCAACCCACTATTAATGGC 58.777 50.000 0.00 0.00 35.74 4.40
182 183 4.106341 CCATCCCTCCAACCCACTATTAAT 59.894 45.833 0.00 0.00 0.00 1.40
277 278 0.676782 GTGCCATCCACTACCACCAC 60.677 60.000 0.00 0.00 41.35 4.16
289 290 0.384309 CATCATGCCACTGTGCCATC 59.616 55.000 0.63 0.00 0.00 3.51
290 291 0.323999 ACATCATGCCACTGTGCCAT 60.324 50.000 1.29 0.00 0.00 4.40
292 293 0.108992 CAACATCATGCCACTGTGCC 60.109 55.000 1.29 0.00 0.00 5.01
293 294 0.599558 ACAACATCATGCCACTGTGC 59.400 50.000 1.29 0.00 0.00 4.57
294 295 3.752747 TCTAACAACATCATGCCACTGTG 59.247 43.478 0.00 0.00 0.00 3.66
304 2949 5.087323 AGTCTTCTCCCTCTAACAACATCA 58.913 41.667 0.00 0.00 0.00 3.07
405 3054 0.322322 ACTATTTCACGGCCGTCCAA 59.678 50.000 31.80 23.98 0.00 3.53
415 3064 2.922740 TATGGGGCCGACTATTTCAC 57.077 50.000 0.00 0.00 0.00 3.18
434 3083 7.781548 ATCTTTCGTAAAGCCGTGTAATAAT 57.218 32.000 0.00 0.00 38.39 1.28
442 3091 3.119245 TCTGCTATCTTTCGTAAAGCCGT 60.119 43.478 0.00 0.00 38.39 5.68
451 3100 6.809196 ACTTTTCTACACTCTGCTATCTTTCG 59.191 38.462 0.00 0.00 0.00 3.46
457 3106 8.079211 TGGATTACTTTTCTACACTCTGCTAT 57.921 34.615 0.00 0.00 0.00 2.97
493 3142 6.874288 TGTTGTTGTGTCATGTATCATTGA 57.126 33.333 0.00 0.00 0.00 2.57
544 3193 6.385467 ACAAGGAACCTAATCATCTTAGCTCT 59.615 38.462 0.00 0.00 0.00 4.09
552 3201 5.253330 TCAACCACAAGGAACCTAATCATC 58.747 41.667 0.00 0.00 38.69 2.92
573 3222 2.746279 AACCCTGATGTGTTGGTTCA 57.254 45.000 0.00 0.00 36.36 3.18
583 3232 3.193691 AGTCTACGAGTTGAACCCTGATG 59.806 47.826 0.00 0.00 0.00 3.07
584 3233 3.432378 AGTCTACGAGTTGAACCCTGAT 58.568 45.455 0.00 0.00 0.00 2.90
585 3234 2.872732 AGTCTACGAGTTGAACCCTGA 58.127 47.619 0.00 0.00 0.00 3.86
596 3245 2.061773 CACAAGTGGCAAGTCTACGAG 58.938 52.381 0.00 0.00 0.00 4.18
599 3248 2.668457 CGATCACAAGTGGCAAGTCTAC 59.332 50.000 0.00 0.00 0.00 2.59
652 3302 0.178068 TCTCCTCCCGCTAAATGCAC 59.822 55.000 0.00 0.00 43.06 4.57
672 3322 4.437239 AGCCTTTGTAGTCGATGAGAATG 58.563 43.478 0.00 0.00 0.00 2.67
677 3327 1.134367 CCGAGCCTTTGTAGTCGATGA 59.866 52.381 0.00 0.00 34.28 2.92
679 3329 1.183549 ACCGAGCCTTTGTAGTCGAT 58.816 50.000 0.00 0.00 34.28 3.59
687 3337 5.334414 GCATCTTCAATATACCGAGCCTTTG 60.334 44.000 0.00 0.00 0.00 2.77
688 3338 4.757149 GCATCTTCAATATACCGAGCCTTT 59.243 41.667 0.00 0.00 0.00 3.11
703 3353 2.518407 TCTACCCCTAGGAGCATCTTCA 59.482 50.000 11.48 0.00 36.73 3.02
713 3363 2.379972 CACTCACACTCTACCCCTAGG 58.620 57.143 0.06 0.06 40.04 3.02
722 3372 1.450025 CATGCATGCACTCACACTCT 58.550 50.000 25.37 0.00 0.00 3.24
735 3385 5.923114 CACTTAACTCTATAGACGCATGCAT 59.077 40.000 19.57 0.36 0.00 3.96
745 3395 8.053026 ACCGGCATATACACTTAACTCTATAG 57.947 38.462 0.00 0.00 0.00 1.31
746 3396 9.519191 TTACCGGCATATACACTTAACTCTATA 57.481 33.333 0.00 0.00 0.00 1.31
748 3398 7.503566 ACTTACCGGCATATACACTTAACTCTA 59.496 37.037 0.00 0.00 0.00 2.43
772 3422 6.795098 TTAAACACGATACAAATGCTCACT 57.205 33.333 0.00 0.00 0.00 3.41
809 3459 7.506114 TGGTGTTTAATCTTGTCACTAAGAGT 58.494 34.615 0.00 0.00 39.81 3.24
811 3461 7.771361 TGTTGGTGTTTAATCTTGTCACTAAGA 59.229 33.333 0.00 0.00 40.65 2.10
812 3462 7.855904 GTGTTGGTGTTTAATCTTGTCACTAAG 59.144 37.037 0.00 0.00 32.19 2.18
813 3463 7.554835 AGTGTTGGTGTTTAATCTTGTCACTAA 59.445 33.333 0.00 0.00 31.09 2.24
814 3464 7.051623 AGTGTTGGTGTTTAATCTTGTCACTA 58.948 34.615 0.00 0.00 31.09 2.74
950 3738 0.393537 ATGTTGAGGCAGGCAGCTAC 60.394 55.000 0.81 0.00 44.79 3.58
951 3739 0.329261 AATGTTGAGGCAGGCAGCTA 59.671 50.000 0.81 0.00 44.79 3.32
952 3740 0.541296 AAATGTTGAGGCAGGCAGCT 60.541 50.000 0.81 0.00 44.79 4.24
953 3741 0.389426 CAAATGTTGAGGCAGGCAGC 60.389 55.000 0.00 0.00 44.65 5.25
954 3742 0.963962 ACAAATGTTGAGGCAGGCAG 59.036 50.000 0.00 0.00 0.00 4.85
955 3743 0.675083 CACAAATGTTGAGGCAGGCA 59.325 50.000 0.00 0.00 0.00 4.75
956 3744 0.037975 CCACAAATGTTGAGGCAGGC 60.038 55.000 0.00 0.00 34.68 4.85
1109 3897 3.182590 ATGTGTGACGGTGGCAGCT 62.183 57.895 15.48 1.59 0.00 4.24
1119 3907 1.154599 CGACTTGCGCATGTGTGAC 60.155 57.895 30.81 16.34 0.00 3.67
1132 3920 4.695231 CGGTGCCGTCGACGACTT 62.695 66.667 37.65 0.00 43.02 3.01
1187 3975 0.038343 ACCGCCATCATTGTTGTTGC 60.038 50.000 0.00 0.00 0.00 4.17
1194 3982 1.775039 CGCCAGTACCGCCATCATTG 61.775 60.000 0.00 0.00 0.00 2.82
1233 4021 4.990910 AGCAGGCCACCCTCCACT 62.991 66.667 5.01 0.00 40.33 4.00
1239 4027 2.439156 GACATCAGCAGGCCACCC 60.439 66.667 5.01 0.00 0.00 4.61
1242 4030 4.783621 GCGGACATCAGCAGGCCA 62.784 66.667 5.01 0.00 37.03 5.36
1258 4046 0.914902 AAGTAGGGGAAGGTGGAGGC 60.915 60.000 0.00 0.00 0.00 4.70
1373 4161 3.831883 CCATCACCATGGCCTTCG 58.168 61.111 13.04 0.00 43.55 3.79
1691 4479 0.747255 AATGATCTCCTCCACGTCCG 59.253 55.000 0.00 0.00 0.00 4.79
1705 4493 2.041612 GCCCTTGGCCCCAATGAT 60.042 61.111 0.00 0.00 44.06 2.45
1970 4764 6.630443 CGAATTTCAGTGACAGTTTCTTTCTG 59.370 38.462 0.00 0.00 38.68 3.02
2020 4814 0.249911 AGACACGCTTGTTCTCACCC 60.250 55.000 0.00 0.00 35.47 4.61
2148 5209 9.134734 GCAAATATAGTGAAAAATCGGAACAAA 57.865 29.630 0.00 0.00 0.00 2.83
2271 5334 7.905126 TCATGTTGCGTATTTCTAGTATTGTG 58.095 34.615 0.00 0.00 0.00 3.33
2287 5350 3.051327 TGCATCAAACTTTCATGTTGCG 58.949 40.909 0.00 0.00 42.41 4.85
2369 5434 7.380602 TCAGTTAAGTCAAACGTAGTAAAGCTC 59.619 37.037 0.00 0.00 45.00 4.09
2392 5457 9.869844 CTTTTTAGTCCGCATATAAGATTTCAG 57.130 33.333 0.00 0.00 0.00 3.02
2393 5458 9.607988 TCTTTTTAGTCCGCATATAAGATTTCA 57.392 29.630 0.00 0.00 0.00 2.69
2418 5483 3.933332 CACCCGTACTTTCTCTCCATTTC 59.067 47.826 0.00 0.00 0.00 2.17
2421 5486 2.233922 CACACCCGTACTTTCTCTCCAT 59.766 50.000 0.00 0.00 0.00 3.41
2422 5487 1.616865 CACACCCGTACTTTCTCTCCA 59.383 52.381 0.00 0.00 0.00 3.86
2429 5495 1.055551 TCCCACCACACCCGTACTTT 61.056 55.000 0.00 0.00 0.00 2.66
2431 5497 0.838987 ATTCCCACCACACCCGTACT 60.839 55.000 0.00 0.00 0.00 2.73
2432 5498 0.903942 TATTCCCACCACACCCGTAC 59.096 55.000 0.00 0.00 0.00 3.67
2434 5500 0.772384 TTTATTCCCACCACACCCGT 59.228 50.000 0.00 0.00 0.00 5.28
2435 5501 1.748493 CATTTATTCCCACCACACCCG 59.252 52.381 0.00 0.00 0.00 5.28
2436 5502 2.107366 CCATTTATTCCCACCACACCC 58.893 52.381 0.00 0.00 0.00 4.61
2477 5543 5.428253 TCTGTAAGCAATAGGACCATCAAC 58.572 41.667 0.00 0.00 0.00 3.18
2478 5544 5.692115 TCTGTAAGCAATAGGACCATCAA 57.308 39.130 0.00 0.00 0.00 2.57
2479 5545 5.189736 ACTTCTGTAAGCAATAGGACCATCA 59.810 40.000 0.00 0.00 36.05 3.07
2480 5546 5.525378 CACTTCTGTAAGCAATAGGACCATC 59.475 44.000 0.00 0.00 36.05 3.51
2481 5547 5.189736 TCACTTCTGTAAGCAATAGGACCAT 59.810 40.000 0.00 0.00 36.05 3.55
2482 5548 4.530553 TCACTTCTGTAAGCAATAGGACCA 59.469 41.667 0.00 0.00 36.05 4.02
2483 5549 4.870991 GTCACTTCTGTAAGCAATAGGACC 59.129 45.833 0.00 0.00 36.05 4.46
2486 5552 5.724328 TCAGTCACTTCTGTAAGCAATAGG 58.276 41.667 0.00 0.00 36.05 2.57
2544 5632 4.024556 CGATGAGAAGGTGTTGCATATTCC 60.025 45.833 0.00 0.00 0.00 3.01
2677 5767 8.641498 ATTGAACCTGACAGAGAAACATATTT 57.359 30.769 3.32 0.00 0.00 1.40
2767 5861 1.622811 CTAGGAGGATGCCCATCTCAC 59.377 57.143 8.06 0.00 37.92 3.51
2775 5869 2.563179 TCGAATTAGCTAGGAGGATGCC 59.437 50.000 0.00 0.00 0.00 4.40
2843 5937 1.236616 TGCAATGCAGTTCGACCAGG 61.237 55.000 2.72 0.00 33.32 4.45
2844 5938 0.806868 ATGCAATGCAGTTCGACCAG 59.193 50.000 14.98 0.00 43.65 4.00
2845 5939 0.522626 CATGCAATGCAGTTCGACCA 59.477 50.000 14.98 0.00 43.65 4.02
2915 6016 1.871676 CATGCAATCACTGATCGAGGG 59.128 52.381 0.00 0.00 0.00 4.30
2956 6057 2.167281 ACTGTAGCTAGGTGCATCAGTG 59.833 50.000 13.23 4.13 46.84 3.66
2958 6059 2.223923 GGACTGTAGCTAGGTGCATCAG 60.224 54.545 13.23 13.02 45.94 2.90
2959 6060 1.757118 GGACTGTAGCTAGGTGCATCA 59.243 52.381 13.23 2.62 45.94 3.07
2960 6061 1.269309 CGGACTGTAGCTAGGTGCATC 60.269 57.143 13.23 12.02 45.94 3.91
2962 6063 1.945354 GCGGACTGTAGCTAGGTGCA 61.945 60.000 12.27 12.27 45.94 4.57
2963 6064 1.227002 GCGGACTGTAGCTAGGTGC 60.227 63.158 4.27 3.46 43.29 5.01
2964 6065 1.038130 AGGCGGACTGTAGCTAGGTG 61.038 60.000 4.27 0.00 0.00 4.00
2965 6066 0.549950 TAGGCGGACTGTAGCTAGGT 59.450 55.000 0.00 0.00 0.00 3.08
2966 6067 0.953003 GTAGGCGGACTGTAGCTAGG 59.047 60.000 0.00 0.00 0.00 3.02
2967 6068 1.604755 CTGTAGGCGGACTGTAGCTAG 59.395 57.143 0.00 0.00 0.00 3.42
2968 6069 1.064906 ACTGTAGGCGGACTGTAGCTA 60.065 52.381 0.00 0.00 30.56 3.32
2969 6070 0.323542 ACTGTAGGCGGACTGTAGCT 60.324 55.000 0.00 0.00 30.56 3.32
2970 6071 0.179134 CACTGTAGGCGGACTGTAGC 60.179 60.000 0.00 0.00 31.10 3.58
3006 6107 2.762535 TCCACACAAGCCTAGCTAAC 57.237 50.000 0.00 0.00 38.25 2.34
3009 6110 2.774234 ACATATCCACACAAGCCTAGCT 59.226 45.455 0.00 0.00 42.56 3.32
3010 6111 3.199880 ACATATCCACACAAGCCTAGC 57.800 47.619 0.00 0.00 0.00 3.42
3011 6112 5.012046 TCCATACATATCCACACAAGCCTAG 59.988 44.000 0.00 0.00 0.00 3.02
3013 6114 3.716353 TCCATACATATCCACACAAGCCT 59.284 43.478 0.00 0.00 0.00 4.58
3014 6115 4.085357 TCCATACATATCCACACAAGCC 57.915 45.455 0.00 0.00 0.00 4.35
3015 6116 5.822519 TCTTTCCATACATATCCACACAAGC 59.177 40.000 0.00 0.00 0.00 4.01
3016 6117 6.017605 GCTCTTTCCATACATATCCACACAAG 60.018 42.308 0.00 0.00 0.00 3.16
3019 6120 4.757149 GGCTCTTTCCATACATATCCACAC 59.243 45.833 0.00 0.00 0.00 3.82
3021 6122 3.997021 CGGCTCTTTCCATACATATCCAC 59.003 47.826 0.00 0.00 0.00 4.02
3108 6394 6.420638 TGCTGAACATGTACTCCTAGTAGTA 58.579 40.000 0.00 0.00 30.12 1.82
3109 6395 5.262009 TGCTGAACATGTACTCCTAGTAGT 58.738 41.667 0.00 0.00 30.12 2.73
3110 6396 5.836821 TGCTGAACATGTACTCCTAGTAG 57.163 43.478 0.00 0.00 30.12 2.57
3111 6397 5.891551 TGATGCTGAACATGTACTCCTAGTA 59.108 40.000 0.00 0.00 39.84 1.82
3112 6398 4.711846 TGATGCTGAACATGTACTCCTAGT 59.288 41.667 0.00 0.00 39.84 2.57
3113 6399 5.268118 TGATGCTGAACATGTACTCCTAG 57.732 43.478 0.00 0.00 39.84 3.02
3114 6400 5.604565 CATGATGCTGAACATGTACTCCTA 58.395 41.667 0.00 0.00 39.84 2.94
3115 6401 4.449131 CATGATGCTGAACATGTACTCCT 58.551 43.478 0.00 0.00 39.84 3.69
3116 6402 4.808077 CATGATGCTGAACATGTACTCC 57.192 45.455 0.00 0.00 39.84 3.85
3122 6408 4.598062 GTGATCACATGATGCTGAACATG 58.402 43.478 21.07 0.00 46.11 3.21
3123 6409 3.311596 CGTGATCACATGATGCTGAACAT 59.688 43.478 24.93 0.00 43.54 2.71
3124 6410 2.674357 CGTGATCACATGATGCTGAACA 59.326 45.455 24.93 0.00 34.37 3.18
3207 6493 0.110238 CGTGTGTGAAGCCATTTCGG 60.110 55.000 0.00 0.00 38.71 4.30
3208 6494 0.865111 TCGTGTGTGAAGCCATTTCG 59.135 50.000 0.00 0.00 38.71 3.46
3209 6495 1.601903 TGTCGTGTGTGAAGCCATTTC 59.398 47.619 0.00 0.00 36.29 2.17
3210 6496 1.333619 GTGTCGTGTGTGAAGCCATTT 59.666 47.619 0.00 0.00 0.00 2.32
3211 6497 0.944386 GTGTCGTGTGTGAAGCCATT 59.056 50.000 0.00 0.00 0.00 3.16
3212 6498 1.221466 CGTGTCGTGTGTGAAGCCAT 61.221 55.000 0.00 0.00 0.00 4.40
3213 6499 1.880796 CGTGTCGTGTGTGAAGCCA 60.881 57.895 0.00 0.00 0.00 4.75
3214 6500 2.594962 CCGTGTCGTGTGTGAAGCC 61.595 63.158 0.00 0.00 0.00 4.35
3215 6501 1.590525 TCCGTGTCGTGTGTGAAGC 60.591 57.895 0.00 0.00 0.00 3.86
3216 6502 0.248907 AGTCCGTGTCGTGTGTGAAG 60.249 55.000 0.00 0.00 0.00 3.02
3217 6503 0.526739 CAGTCCGTGTCGTGTGTGAA 60.527 55.000 0.00 0.00 0.00 3.18
3218 6504 1.065109 CAGTCCGTGTCGTGTGTGA 59.935 57.895 0.00 0.00 0.00 3.58
3219 6505 2.585869 GCAGTCCGTGTCGTGTGTG 61.586 63.158 0.00 0.00 0.00 3.82
3220 6506 2.279252 GCAGTCCGTGTCGTGTGT 60.279 61.111 0.00 0.00 0.00 3.72
3221 6507 2.279186 TGCAGTCCGTGTCGTGTG 60.279 61.111 0.00 0.00 0.00 3.82
3222 6508 2.279252 GTGCAGTCCGTGTCGTGT 60.279 61.111 0.00 0.00 0.00 4.49
3223 6509 3.394874 CGTGCAGTCCGTGTCGTG 61.395 66.667 0.00 0.00 0.00 4.35
3224 6510 2.797866 GATCGTGCAGTCCGTGTCGT 62.798 60.000 0.00 0.00 0.00 4.34
3225 6511 2.126463 ATCGTGCAGTCCGTGTCG 60.126 61.111 0.00 0.00 0.00 4.35
3226 6512 1.073216 CAGATCGTGCAGTCCGTGTC 61.073 60.000 0.00 0.00 0.00 3.67
3227 6513 1.080501 CAGATCGTGCAGTCCGTGT 60.081 57.895 0.00 0.00 0.00 4.49
3228 6514 3.772636 CAGATCGTGCAGTCCGTG 58.227 61.111 0.00 0.00 0.00 4.94
3240 6526 2.531912 CACTGTGTATCGTTCGCAGATC 59.468 50.000 18.38 0.00 43.45 2.75
3241 6527 2.094700 ACACTGTGTATCGTTCGCAGAT 60.095 45.455 12.53 8.22 43.45 2.90
3242 6528 1.268625 ACACTGTGTATCGTTCGCAGA 59.731 47.619 12.53 0.00 43.45 4.26
3243 6529 1.386748 CACACTGTGTATCGTTCGCAG 59.613 52.381 13.89 12.99 45.37 5.18
3244 6530 1.414378 CACACTGTGTATCGTTCGCA 58.586 50.000 13.89 0.00 0.00 5.10
3245 6531 0.093026 GCACACTGTGTATCGTTCGC 59.907 55.000 13.89 7.24 35.75 4.70
3246 6532 1.414378 TGCACACTGTGTATCGTTCG 58.586 50.000 13.89 0.35 35.75 3.95
3247 6533 2.474526 GCATGCACACTGTGTATCGTTC 60.475 50.000 14.21 1.30 36.79 3.95
3248 6534 1.464608 GCATGCACACTGTGTATCGTT 59.535 47.619 14.21 0.00 36.79 3.85
3249 6535 1.078709 GCATGCACACTGTGTATCGT 58.921 50.000 14.21 7.14 36.79 3.73
3250 6536 1.077915 TGCATGCACACTGTGTATCG 58.922 50.000 18.46 2.65 36.79 2.92
3251 6537 2.679336 TGATGCATGCACACTGTGTATC 59.321 45.455 25.37 13.74 36.79 2.24
3252 6538 2.681344 CTGATGCATGCACACTGTGTAT 59.319 45.455 25.37 8.88 39.29 2.29
3253 6539 2.078392 CTGATGCATGCACACTGTGTA 58.922 47.619 25.37 6.73 35.75 2.90
3254 6540 0.879090 CTGATGCATGCACACTGTGT 59.121 50.000 25.37 7.80 35.75 3.72
3255 6541 0.456142 GCTGATGCATGCACACTGTG 60.456 55.000 25.37 11.14 39.41 3.66
3256 6542 1.880894 GCTGATGCATGCACACTGT 59.119 52.632 25.37 6.46 39.41 3.55
3257 6543 1.226295 CGCTGATGCATGCACACTG 60.226 57.895 25.37 22.41 39.64 3.66
3258 6544 2.404186 CCGCTGATGCATGCACACT 61.404 57.895 25.37 7.40 39.64 3.55
3259 6545 2.101575 CCGCTGATGCATGCACAC 59.898 61.111 25.37 20.04 39.64 3.82
3260 6546 2.046120 TCCGCTGATGCATGCACA 60.046 55.556 25.37 20.70 39.64 4.57
3261 6547 2.319011 CTGTCCGCTGATGCATGCAC 62.319 60.000 25.37 17.16 39.64 4.57
3262 6548 2.046120 TGTCCGCTGATGCATGCA 60.046 55.556 25.04 25.04 39.64 3.96
3263 6549 1.371337 TTCTGTCCGCTGATGCATGC 61.371 55.000 11.82 11.82 39.64 4.06
3264 6550 1.089112 TTTCTGTCCGCTGATGCATG 58.911 50.000 2.46 0.00 39.64 4.06
3265 6551 1.825090 TTTTCTGTCCGCTGATGCAT 58.175 45.000 0.00 0.00 39.64 3.96
3266 6552 1.266718 GTTTTTCTGTCCGCTGATGCA 59.733 47.619 0.00 0.00 39.64 3.96
3267 6553 1.401539 GGTTTTTCTGTCCGCTGATGC 60.402 52.381 0.00 0.00 0.00 3.91
3268 6554 1.879380 TGGTTTTTCTGTCCGCTGATG 59.121 47.619 0.00 0.00 0.00 3.07
3269 6555 2.270352 TGGTTTTTCTGTCCGCTGAT 57.730 45.000 0.00 0.00 0.00 2.90
3270 6556 1.673920 GTTGGTTTTTCTGTCCGCTGA 59.326 47.619 0.00 0.00 0.00 4.26
3271 6557 1.676006 AGTTGGTTTTTCTGTCCGCTG 59.324 47.619 0.00 0.00 0.00 5.18
3272 6558 1.947456 GAGTTGGTTTTTCTGTCCGCT 59.053 47.619 0.00 0.00 0.00 5.52
3273 6559 1.001706 GGAGTTGGTTTTTCTGTCCGC 60.002 52.381 0.00 0.00 0.00 5.54
3274 6560 1.607148 GGGAGTTGGTTTTTCTGTCCG 59.393 52.381 0.00 0.00 0.00 4.79
3275 6561 2.885266 GAGGGAGTTGGTTTTTCTGTCC 59.115 50.000 0.00 0.00 0.00 4.02
3276 6562 2.885266 GGAGGGAGTTGGTTTTTCTGTC 59.115 50.000 0.00 0.00 0.00 3.51
3277 6563 2.514160 AGGAGGGAGTTGGTTTTTCTGT 59.486 45.455 0.00 0.00 0.00 3.41
3278 6564 2.887152 CAGGAGGGAGTTGGTTTTTCTG 59.113 50.000 0.00 0.00 0.00 3.02
3279 6565 2.753168 GCAGGAGGGAGTTGGTTTTTCT 60.753 50.000 0.00 0.00 0.00 2.52
3280 6566 1.613925 GCAGGAGGGAGTTGGTTTTTC 59.386 52.381 0.00 0.00 0.00 2.29
3281 6567 1.063266 TGCAGGAGGGAGTTGGTTTTT 60.063 47.619 0.00 0.00 0.00 1.94
3282 6568 0.555769 TGCAGGAGGGAGTTGGTTTT 59.444 50.000 0.00 0.00 0.00 2.43
3283 6569 0.779997 ATGCAGGAGGGAGTTGGTTT 59.220 50.000 0.00 0.00 0.00 3.27
3284 6570 0.038744 CATGCAGGAGGGAGTTGGTT 59.961 55.000 0.00 0.00 0.00 3.67
3285 6571 1.136329 ACATGCAGGAGGGAGTTGGT 61.136 55.000 4.84 0.00 0.00 3.67
3286 6572 0.911769 TACATGCAGGAGGGAGTTGG 59.088 55.000 4.84 0.00 0.00 3.77
3287 6573 1.740380 CGTACATGCAGGAGGGAGTTG 60.740 57.143 4.84 0.00 0.00 3.16
3288 6574 0.537188 CGTACATGCAGGAGGGAGTT 59.463 55.000 4.84 0.00 0.00 3.01
3289 6575 0.614979 ACGTACATGCAGGAGGGAGT 60.615 55.000 4.84 0.00 0.00 3.85
3290 6576 0.179100 CACGTACATGCAGGAGGGAG 60.179 60.000 4.84 0.00 0.00 4.30
3291 6577 1.897423 CACGTACATGCAGGAGGGA 59.103 57.895 4.84 0.00 0.00 4.20
3292 6578 1.815421 GCACGTACATGCAGGAGGG 60.815 63.158 9.42 0.00 45.39 4.30
3293 6579 2.167219 CGCACGTACATGCAGGAGG 61.167 63.158 15.00 0.00 46.47 4.30
3294 6580 2.802667 GCGCACGTACATGCAGGAG 61.803 63.158 15.00 0.00 46.47 3.69
3295 6581 2.813474 GCGCACGTACATGCAGGA 60.813 61.111 15.00 0.00 46.47 3.86
3296 6582 2.815211 AGCGCACGTACATGCAGG 60.815 61.111 15.00 0.00 46.47 4.85
3297 6583 2.396861 CAGCGCACGTACATGCAG 59.603 61.111 15.00 7.96 46.47 4.41
3298 6584 3.787676 GCAGCGCACGTACATGCA 61.788 61.111 15.00 0.00 46.47 3.96
3299 6585 3.490759 AGCAGCGCACGTACATGC 61.491 61.111 11.47 9.07 42.48 4.06
3300 6586 2.382746 ACAGCAGCGCACGTACATG 61.383 57.895 11.47 0.00 0.00 3.21
3301 6587 2.048222 ACAGCAGCGCACGTACAT 60.048 55.556 11.47 0.00 0.00 2.29
3302 6588 3.035503 CACAGCAGCGCACGTACA 61.036 61.111 11.47 0.00 0.00 2.90
3303 6589 4.430423 GCACAGCAGCGCACGTAC 62.430 66.667 11.47 0.00 0.00 3.67
3304 6590 4.662961 AGCACAGCAGCGCACGTA 62.663 61.111 11.47 0.00 40.15 3.57
3311 6597 3.371063 ATGTGGCAGCACAGCAGC 61.371 61.111 0.00 0.00 40.31 5.25
3312 6598 2.566529 CATGTGGCAGCACAGCAG 59.433 61.111 0.00 0.00 38.59 4.24
3313 6599 2.986979 CCATGTGGCAGCACAGCA 60.987 61.111 0.00 0.00 38.59 4.41
3314 6600 3.755628 CCCATGTGGCAGCACAGC 61.756 66.667 0.00 0.00 38.59 4.40
3315 6601 1.379443 ATCCCATGTGGCAGCACAG 60.379 57.895 0.00 0.00 38.59 3.66
3316 6602 1.378911 GATCCCATGTGGCAGCACA 60.379 57.895 0.00 0.00 39.62 4.57
3317 6603 2.475466 CGATCCCATGTGGCAGCAC 61.475 63.158 0.00 0.00 0.00 4.40
3318 6604 2.124612 CGATCCCATGTGGCAGCA 60.125 61.111 0.00 0.00 0.00 4.41
3319 6605 2.124570 ACGATCCCATGTGGCAGC 60.125 61.111 0.00 0.00 0.00 5.25
3320 6606 2.475466 GCACGATCCCATGTGGCAG 61.475 63.158 0.00 0.00 36.61 4.85
3321 6607 2.438254 GCACGATCCCATGTGGCA 60.438 61.111 0.00 0.00 36.61 4.92
3322 6608 2.438254 TGCACGATCCCATGTGGC 60.438 61.111 0.00 0.00 36.61 5.01
3323 6609 1.377072 TGTGCACGATCCCATGTGG 60.377 57.895 13.13 0.00 36.61 4.17
3324 6610 1.796151 GTGTGCACGATCCCATGTG 59.204 57.895 13.13 0.00 39.10 3.21
3325 6611 4.301505 GTGTGCACGATCCCATGT 57.698 55.556 13.13 0.00 0.00 3.21
3335 6621 4.961511 TCCAGCCGACGTGTGCAC 62.962 66.667 10.75 10.75 0.00 4.57
3336 6622 4.662961 CTCCAGCCGACGTGTGCA 62.663 66.667 0.00 0.00 0.00 4.57
3337 6623 4.664677 ACTCCAGCCGACGTGTGC 62.665 66.667 0.00 0.00 0.00 4.57
3338 6624 1.557443 GAAACTCCAGCCGACGTGTG 61.557 60.000 0.00 0.00 0.00 3.82
3339 6625 1.300697 GAAACTCCAGCCGACGTGT 60.301 57.895 0.00 0.00 0.00 4.49
3340 6626 0.670546 ATGAAACTCCAGCCGACGTG 60.671 55.000 0.00 0.00 0.00 4.49
3341 6627 0.389948 GATGAAACTCCAGCCGACGT 60.390 55.000 0.00 0.00 0.00 4.34
3342 6628 1.413767 CGATGAAACTCCAGCCGACG 61.414 60.000 0.00 0.00 0.00 5.12
3343 6629 0.389948 ACGATGAAACTCCAGCCGAC 60.390 55.000 0.00 0.00 0.00 4.79
3344 6630 0.389817 CACGATGAAACTCCAGCCGA 60.390 55.000 0.00 0.00 0.00 5.54
3345 6631 0.670546 ACACGATGAAACTCCAGCCG 60.671 55.000 0.00 0.00 0.00 5.52
3346 6632 0.798776 CACACGATGAAACTCCAGCC 59.201 55.000 0.00 0.00 0.00 4.85
3347 6633 1.512926 ACACACGATGAAACTCCAGC 58.487 50.000 0.00 0.00 0.00 4.85
3348 6634 4.504461 GCTATACACACGATGAAACTCCAG 59.496 45.833 0.00 0.00 0.00 3.86
3349 6635 4.081917 TGCTATACACACGATGAAACTCCA 60.082 41.667 0.00 0.00 0.00 3.86
3350 6636 4.430007 TGCTATACACACGATGAAACTCC 58.570 43.478 0.00 0.00 0.00 3.85
3351 6637 5.108217 CGATGCTATACACACGATGAAACTC 60.108 44.000 0.00 0.00 34.64 3.01
3352 6638 4.740205 CGATGCTATACACACGATGAAACT 59.260 41.667 0.00 0.00 34.64 2.66
3353 6639 4.606232 GCGATGCTATACACACGATGAAAC 60.606 45.833 0.00 0.00 34.64 2.78
3354 6640 3.489416 GCGATGCTATACACACGATGAAA 59.511 43.478 0.00 0.00 34.64 2.69
3355 6641 3.049912 GCGATGCTATACACACGATGAA 58.950 45.455 0.00 0.00 34.64 2.57
3356 6642 2.293399 AGCGATGCTATACACACGATGA 59.707 45.455 0.00 0.00 36.99 2.92
3357 6643 2.658802 GAGCGATGCTATACACACGATG 59.341 50.000 0.00 0.00 39.88 3.84
3358 6644 2.665794 CGAGCGATGCTATACACACGAT 60.666 50.000 0.00 0.00 39.88 3.73
3359 6645 1.333791 CGAGCGATGCTATACACACGA 60.334 52.381 0.00 0.00 39.88 4.35
3360 6646 1.045477 CGAGCGATGCTATACACACG 58.955 55.000 0.00 0.00 39.88 4.49
3361 6647 1.409412 CCGAGCGATGCTATACACAC 58.591 55.000 0.00 0.00 39.88 3.82
3362 6648 0.313987 CCCGAGCGATGCTATACACA 59.686 55.000 0.00 0.00 39.88 3.72
3363 6649 1.009389 GCCCGAGCGATGCTATACAC 61.009 60.000 0.00 0.00 39.88 2.90
3364 6650 1.179174 AGCCCGAGCGATGCTATACA 61.179 55.000 5.33 0.00 46.67 2.29
3365 6651 0.809385 TAGCCCGAGCGATGCTATAC 59.191 55.000 9.08 0.00 46.67 1.47
3366 6652 1.095600 CTAGCCCGAGCGATGCTATA 58.904 55.000 12.19 0.00 46.67 1.31
3367 6653 0.609406 TCTAGCCCGAGCGATGCTAT 60.609 55.000 12.19 0.00 46.67 2.97
3368 6654 1.228154 TCTAGCCCGAGCGATGCTA 60.228 57.895 11.55 11.55 46.67 3.49
3369 6655 2.519541 TCTAGCCCGAGCGATGCT 60.520 61.111 10.68 10.68 46.67 3.79
3370 6656 2.049618 CTCTAGCCCGAGCGATGC 60.050 66.667 0.00 0.00 46.67 3.91
3371 6657 0.889638 TACCTCTAGCCCGAGCGATG 60.890 60.000 0.00 0.00 46.67 3.84
3372 6658 0.890090 GTACCTCTAGCCCGAGCGAT 60.890 60.000 0.00 0.00 46.67 4.58
3373 6659 1.525535 GTACCTCTAGCCCGAGCGA 60.526 63.158 0.00 0.00 46.67 4.93
3374 6660 1.526455 AGTACCTCTAGCCCGAGCG 60.526 63.158 0.00 0.00 46.67 5.03
3375 6661 1.457009 CCAGTACCTCTAGCCCGAGC 61.457 65.000 0.00 0.00 40.32 5.03
3376 6662 1.457009 GCCAGTACCTCTAGCCCGAG 61.457 65.000 0.00 0.00 0.00 4.63
3377 6663 1.455217 GCCAGTACCTCTAGCCCGA 60.455 63.158 0.00 0.00 0.00 5.14
3378 6664 2.499827 GGCCAGTACCTCTAGCCCG 61.500 68.421 0.00 0.00 43.47 6.13
3379 6665 3.552219 GGCCAGTACCTCTAGCCC 58.448 66.667 0.00 0.00 43.47 5.19
3408 6694 3.396276 ACTATCTCTCTCATCTCCCGGAA 59.604 47.826 0.73 0.00 0.00 4.30
3413 6699 6.721318 ACATAGGACTATCTCTCTCATCTCC 58.279 44.000 0.00 0.00 0.00 3.71
3426 6712 8.941995 TGCTCAAGATAGTAACATAGGACTAT 57.058 34.615 0.00 0.00 40.73 2.12
3428 6714 6.836527 ACTGCTCAAGATAGTAACATAGGACT 59.163 38.462 0.00 0.00 0.00 3.85
3454 6740 5.307456 TGGACAGTATCTCTACCTATCGAGT 59.693 44.000 0.00 0.00 0.00 4.18
3523 6817 2.990740 AATGAAAGGCCCAGGTGTTA 57.009 45.000 0.00 0.00 0.00 2.41
3611 7034 9.529325 CATATATTCTGTCTACTTTTTCACCGA 57.471 33.333 0.00 0.00 0.00 4.69
3621 7044 9.290988 AGATGACGAACATATATTCTGTCTACT 57.709 33.333 15.00 12.05 39.56 2.57
3627 7050 9.143631 TGCATAAGATGACGAACATATATTCTG 57.856 33.333 0.00 0.00 39.56 3.02
3718 7205 5.109210 GTGCATGAGTTTTAATTTAGGGGC 58.891 41.667 0.00 0.00 0.00 5.80
3719 7206 5.339990 CGTGCATGAGTTTTAATTTAGGGG 58.660 41.667 0.00 0.00 0.00 4.79
3754 7278 7.830099 ATCTTGGAGTATGATTGGGAAAATC 57.170 36.000 0.00 0.00 0.00 2.17
3755 7279 9.887862 ATTATCTTGGAGTATGATTGGGAAAAT 57.112 29.630 0.00 0.00 0.00 1.82
3793 7317 5.032846 TCTGGGATATGATTAGATCCACCC 58.967 45.833 12.69 0.00 44.75 4.61
3812 7338 1.379916 TGGGGACAGCAACATCTGG 59.620 57.895 0.00 0.00 38.36 3.86
3838 7364 3.292460 AGCCAGTATCTCTAGCTTTCGT 58.708 45.455 0.00 0.00 37.86 3.85
3936 7469 8.933807 ACATGAAATATTGAAGATATGCTCGAG 58.066 33.333 8.45 8.45 0.00 4.04
3959 7492 6.609237 ACACGTACTACATATACACGACAT 57.391 37.500 0.00 0.00 36.51 3.06
3970 7503 6.017275 GGAAGACTATGCTACACGTACTACAT 60.017 42.308 0.00 0.00 0.00 2.29
3971 7504 5.295292 GGAAGACTATGCTACACGTACTACA 59.705 44.000 0.00 0.00 0.00 2.74
3972 7505 5.557893 CGGAAGACTATGCTACACGTACTAC 60.558 48.000 0.00 0.00 0.00 2.73
3973 7506 4.509230 CGGAAGACTATGCTACACGTACTA 59.491 45.833 0.00 0.00 0.00 1.82
3974 7507 3.311871 CGGAAGACTATGCTACACGTACT 59.688 47.826 0.00 0.00 0.00 2.73
4232 7795 2.303022 TGAGAACGGGAGAAGCAGAAAT 59.697 45.455 0.00 0.00 0.00 2.17
4235 7798 0.603569 GTGAGAACGGGAGAAGCAGA 59.396 55.000 0.00 0.00 0.00 4.26
4238 7801 0.892063 AGAGTGAGAACGGGAGAAGC 59.108 55.000 0.00 0.00 0.00 3.86
4241 7804 1.074084 ACAGAGAGTGAGAACGGGAGA 59.926 52.381 0.00 0.00 0.00 3.71
4253 7816 2.283532 AGGAGCGGCACAGAGAGT 60.284 61.111 1.45 0.00 0.00 3.24
4276 7839 3.443045 GGTTGTGCATGCCGAGGG 61.443 66.667 16.68 0.00 0.00 4.30
4323 7886 4.101448 CTTGCTCCTGTCCCCGGG 62.101 72.222 15.80 15.80 38.61 5.73
4333 7896 0.962855 GAAGAGGTTGCCCTTGCTCC 60.963 60.000 0.00 0.00 42.86 4.70
4706 8269 1.604378 CGGGTCCAGCATCTTCCTT 59.396 57.895 0.00 0.00 0.00 3.36
4814 8377 4.170062 CGCCGCTGCACCTCATTG 62.170 66.667 0.00 0.00 37.32 2.82
4973 8536 1.065102 TCGTCAATAGTAGACTGCGCC 59.935 52.381 4.18 0.00 33.89 6.53
4984 8547 3.150848 TGCACTGCTAGTCGTCAATAG 57.849 47.619 1.98 0.00 0.00 1.73
4998 8561 6.250739 CGTAGTTGTAGTACTGTATTGCACTG 59.749 42.308 5.39 0.00 0.00 3.66
4999 8562 6.149973 TCGTAGTTGTAGTACTGTATTGCACT 59.850 38.462 5.39 5.19 0.00 4.40
5007 8570 5.163774 GCTAGCTTCGTAGTTGTAGTACTGT 60.164 44.000 7.70 0.00 0.00 3.55
5016 8579 2.288969 GCGGCTAGCTTCGTAGTTG 58.711 57.895 15.72 0.00 44.04 3.16
5027 8590 1.016130 CAGTGACCACAAGCGGCTAG 61.016 60.000 1.35 0.00 0.00 3.42
5028 8591 1.005037 CAGTGACCACAAGCGGCTA 60.005 57.895 1.35 0.00 0.00 3.93
5029 8592 2.281070 CAGTGACCACAAGCGGCT 60.281 61.111 0.00 0.00 0.00 5.52
5030 8593 4.030452 GCAGTGACCACAAGCGGC 62.030 66.667 0.00 0.00 0.00 6.53
5031 8594 2.281070 AGCAGTGACCACAAGCGG 60.281 61.111 0.00 0.00 38.86 5.52
5032 8595 1.595109 TCAGCAGTGACCACAAGCG 60.595 57.895 0.00 3.88 38.86 4.68
5043 8606 0.032130 CACTGTACACCGTCAGCAGT 59.968 55.000 0.00 0.00 40.54 4.40
5051 8614 0.734597 TATGCACGCACTGTACACCG 60.735 55.000 0.00 0.00 0.00 4.94
5064 8628 2.452813 CCAGGACACGCGTATGCAC 61.453 63.158 13.44 0.35 42.97 4.57
5066 8630 3.564027 GCCAGGACACGCGTATGC 61.564 66.667 13.44 6.01 37.91 3.14
5067 8631 1.878522 GAGCCAGGACACGCGTATG 60.879 63.158 13.44 8.73 0.00 2.39
5068 8632 2.494918 GAGCCAGGACACGCGTAT 59.505 61.111 13.44 0.00 0.00 3.06
5069 8633 4.111016 CGAGCCAGGACACGCGTA 62.111 66.667 13.44 0.00 0.00 4.42
5073 8637 2.126307 CTGACGAGCCAGGACACG 60.126 66.667 0.00 0.00 0.00 4.49
5082 8647 2.101582 ACACAGATAATCCCTGACGAGC 59.898 50.000 0.00 0.00 35.69 5.03
5098 8663 2.281484 CACCCCCGGACAACACAG 60.281 66.667 0.73 0.00 0.00 3.66
5213 8956 2.753452 TGTCTGACTAATCACGGGAGAC 59.247 50.000 9.51 0.00 0.00 3.36
5214 8957 3.081710 TGTCTGACTAATCACGGGAGA 57.918 47.619 9.51 0.00 0.00 3.71
5215 8958 3.868757 TTGTCTGACTAATCACGGGAG 57.131 47.619 9.51 0.00 0.00 4.30
5218 8961 3.116300 CCGATTGTCTGACTAATCACGG 58.884 50.000 21.56 17.41 33.89 4.94
5228 8971 2.037121 TCAAGAGTTGCCGATTGTCTGA 59.963 45.455 0.00 0.00 0.00 3.27
5238 8981 3.120442 GCATGCAAATTTCAAGAGTTGCC 60.120 43.478 14.21 0.00 44.53 4.52
5265 9018 4.065789 ACGCCCTTAGTTTTCTCTTTGAG 58.934 43.478 0.00 0.00 0.00 3.02
5267 9020 3.058224 CCACGCCCTTAGTTTTCTCTTTG 60.058 47.826 0.00 0.00 0.00 2.77
5279 9032 1.001248 AGACCTAGCCACGCCCTTA 59.999 57.895 0.00 0.00 0.00 2.69
5285 9038 1.592400 TTGACCGAGACCTAGCCACG 61.592 60.000 0.00 0.00 0.00 4.94
5327 9244 9.311916 CATGAAGATTTGTACAAACTTTTTCCA 57.688 29.630 22.78 18.36 32.51 3.53
5328 9245 8.275632 GCATGAAGATTTGTACAAACTTTTTCC 58.724 33.333 22.78 14.55 32.51 3.13
5349 9267 6.999871 TGCTATATTCCTTTGATCTTGCATGA 59.000 34.615 4.57 4.57 0.00 3.07
5371 9289 4.895224 TCGTTATGTCTTAGTCGATGCT 57.105 40.909 0.00 0.00 0.00 3.79
5373 9291 6.487960 AGTCTTCGTTATGTCTTAGTCGATG 58.512 40.000 0.00 0.00 0.00 3.84
5379 9297 5.960683 CGACTGAGTCTTCGTTATGTCTTAG 59.039 44.000 11.26 0.00 0.00 2.18
5381 9299 4.454847 TCGACTGAGTCTTCGTTATGTCTT 59.545 41.667 11.26 0.00 36.60 3.01
5397 9315 7.775860 GCTTTGCTAAGTCTCAGTCGACTGA 62.776 48.000 38.24 38.24 43.14 3.41
5398 9316 3.560902 TTGCTAAGTCTCAGTCGACTG 57.439 47.619 34.76 34.76 43.14 3.51
5399 9317 3.612955 GCTTTGCTAAGTCTCAGTCGACT 60.613 47.826 13.58 13.58 45.73 4.18
5400 9318 2.664085 GCTTTGCTAAGTCTCAGTCGAC 59.336 50.000 7.70 7.70 33.74 4.20
5401 9319 2.558795 AGCTTTGCTAAGTCTCAGTCGA 59.441 45.455 9.64 0.00 36.99 4.20
5402 9320 2.665537 CAGCTTTGCTAAGTCTCAGTCG 59.334 50.000 9.64 0.00 36.40 4.18
5403 9321 3.919216 TCAGCTTTGCTAAGTCTCAGTC 58.081 45.455 9.64 0.00 36.40 3.51
5404 9322 4.342862 TTCAGCTTTGCTAAGTCTCAGT 57.657 40.909 9.64 0.00 36.40 3.41
5405 9323 5.679734 TTTTCAGCTTTGCTAAGTCTCAG 57.320 39.130 9.64 0.00 36.40 3.35
5406 9324 5.356751 TGTTTTTCAGCTTTGCTAAGTCTCA 59.643 36.000 9.64 0.00 36.40 3.27
5407 9325 5.821204 TGTTTTTCAGCTTTGCTAAGTCTC 58.179 37.500 9.64 0.00 36.40 3.36
5408 9326 5.835113 TGTTTTTCAGCTTTGCTAAGTCT 57.165 34.783 9.64 4.69 36.40 3.24
5409 9327 6.885735 TTTGTTTTTCAGCTTTGCTAAGTC 57.114 33.333 9.64 2.53 36.40 3.01
5410 9328 7.848223 ATTTTGTTTTTCAGCTTTGCTAAGT 57.152 28.000 9.64 0.00 36.40 2.24
5438 9356 7.581213 TGCGGGATTTTACATGATAAGATTT 57.419 32.000 0.00 0.00 0.00 2.17
5448 9366 3.879295 CTGAGTGATGCGGGATTTTACAT 59.121 43.478 0.00 0.00 0.00 2.29
5456 9374 1.543944 TTGAGCTGAGTGATGCGGGA 61.544 55.000 0.00 0.00 0.00 5.14
5526 9444 5.242838 TGGCCGAATTTAGAAAACATTGACT 59.757 36.000 0.00 0.00 0.00 3.41
5527 9445 5.465935 TGGCCGAATTTAGAAAACATTGAC 58.534 37.500 0.00 0.00 0.00 3.18
5723 9648 5.634896 CAAGCTAGCCATAACTTGACAAAG 58.365 41.667 12.13 0.00 37.30 2.77
5727 9652 3.009723 TGCAAGCTAGCCATAACTTGAC 58.990 45.455 12.13 5.54 37.30 3.18
5753 9678 4.099573 CGGTCTGTCCCACAATATAAGACT 59.900 45.833 0.00 0.00 34.41 3.24
5775 9700 4.099573 ACCAAATGTATACTCCCTCTGTCG 59.900 45.833 4.17 0.00 0.00 4.35
5791 9716 7.569957 GCAATGCTTTCTAAGTTTGACCAAATG 60.570 37.037 0.00 0.00 32.36 2.32
5810 9735 5.535753 AACTCAGTTAAAAAGGCAATGCT 57.464 34.783 4.82 0.00 0.00 3.79
5816 9741 8.331730 TGAGGTATAAACTCAGTTAAAAAGGC 57.668 34.615 0.00 0.00 39.87 4.35
5825 9750 8.432805 CCCAAATAGATGAGGTATAAACTCAGT 58.567 37.037 12.35 6.57 46.98 3.41
5828 9753 9.274206 GAACCCAAATAGATGAGGTATAAACTC 57.726 37.037 0.00 0.00 35.55 3.01
5838 9763 4.410228 TCCCTCTGAACCCAAATAGATGAG 59.590 45.833 0.00 0.00 0.00 2.90
5852 9777 6.782988 CCTTTATATGGACTACTCCCTCTGAA 59.217 42.308 0.00 0.00 35.34 3.02
5859 9784 5.778750 TGTAGCCCTTTATATGGACTACTCC 59.221 44.000 14.91 0.00 34.82 3.85
5887 9812 8.531982 AGCACAGAGATTAGTACTACAAATCAA 58.468 33.333 15.82 0.00 33.06 2.57
5894 9819 7.697291 GTGTACAAGCACAGAGATTAGTACTAC 59.303 40.741 0.91 0.00 39.07 2.73
5897 9822 6.387465 TGTGTACAAGCACAGAGATTAGTAC 58.613 40.000 0.00 0.00 43.54 2.73
5908 9833 3.559655 CACTAGCTTTGTGTACAAGCACA 59.440 43.478 17.89 6.52 46.30 4.57
5909 9834 3.807622 TCACTAGCTTTGTGTACAAGCAC 59.192 43.478 17.89 0.00 37.15 4.40
5910 9835 4.058124 CTCACTAGCTTTGTGTACAAGCA 58.942 43.478 17.89 1.65 37.15 3.91
5911 9836 3.433615 CCTCACTAGCTTTGTGTACAAGC 59.566 47.826 9.57 9.57 37.15 4.01
5912 9837 3.433615 GCCTCACTAGCTTTGTGTACAAG 59.566 47.826 15.88 0.00 37.15 3.16
5928 9853 4.083862 GTCTGGGTCCCGCCTCAC 62.084 72.222 2.65 0.00 37.43 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.