Multiple sequence alignment - TraesCS5B01G509000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G509000 | chr5B | 100.000 | 2267 | 0 | 0 | 1 | 2267 | 674266259 | 674268525 | 0.000000e+00 | 4187.0 |
1 | TraesCS5B01G509000 | chr5B | 87.879 | 165 | 20 | 0 | 2072 | 2236 | 65189716 | 65189552 | 6.390000e-46 | 195.0 |
2 | TraesCS5B01G509000 | chr5D | 81.191 | 1276 | 102 | 53 | 830 | 2085 | 534003971 | 534005128 | 0.000000e+00 | 900.0 |
3 | TraesCS5B01G509000 | chr5D | 86.513 | 304 | 13 | 12 | 372 | 650 | 534003429 | 534003729 | 2.190000e-80 | 309.0 |
4 | TraesCS5B01G509000 | chr5D | 91.480 | 223 | 16 | 3 | 2044 | 2266 | 534005128 | 534005347 | 1.020000e-78 | 303.0 |
5 | TraesCS5B01G509000 | chr5D | 86.061 | 165 | 23 | 0 | 2072 | 2236 | 65903865 | 65904029 | 6.430000e-41 | 178.0 |
6 | TraesCS5B01G509000 | chr5D | 95.918 | 49 | 2 | 0 | 772 | 820 | 534003879 | 534003927 | 1.870000e-11 | 80.5 |
7 | TraesCS5B01G509000 | chr4A | 88.592 | 561 | 45 | 7 | 1710 | 2265 | 637924316 | 637923770 | 0.000000e+00 | 664.0 |
8 | TraesCS5B01G509000 | chr4A | 84.924 | 524 | 25 | 23 | 772 | 1275 | 637930106 | 637929617 | 4.380000e-132 | 481.0 |
9 | TraesCS5B01G509000 | chr4A | 87.448 | 239 | 13 | 5 | 375 | 596 | 637930890 | 637930652 | 2.230000e-65 | 259.0 |
10 | TraesCS5B01G509000 | chr4A | 94.048 | 168 | 10 | 0 | 211 | 378 | 517406632 | 517406465 | 2.890000e-64 | 255.0 |
11 | TraesCS5B01G509000 | chr4D | 95.679 | 162 | 7 | 0 | 211 | 372 | 12520301 | 12520140 | 6.210000e-66 | 261.0 |
12 | TraesCS5B01G509000 | chr4D | 95.181 | 166 | 7 | 1 | 211 | 375 | 437295926 | 437295761 | 6.210000e-66 | 261.0 |
13 | TraesCS5B01G509000 | chr4D | 93.103 | 174 | 12 | 0 | 201 | 374 | 3590645 | 3590472 | 2.890000e-64 | 255.0 |
14 | TraesCS5B01G509000 | chr3D | 94.545 | 165 | 9 | 0 | 209 | 373 | 6667274 | 6667438 | 2.890000e-64 | 255.0 |
15 | TraesCS5B01G509000 | chr3D | 89.231 | 195 | 16 | 5 | 192 | 383 | 87926182 | 87925990 | 2.910000e-59 | 239.0 |
16 | TraesCS5B01G509000 | chrUn | 93.529 | 170 | 9 | 2 | 211 | 380 | 141680746 | 141680913 | 3.740000e-63 | 252.0 |
17 | TraesCS5B01G509000 | chr4B | 91.713 | 181 | 13 | 2 | 211 | 391 | 100321241 | 100321419 | 1.340000e-62 | 250.0 |
18 | TraesCS5B01G509000 | chr2D | 93.491 | 169 | 10 | 1 | 208 | 376 | 624881783 | 624881950 | 1.340000e-62 | 250.0 |
19 | TraesCS5B01G509000 | chr5A | 87.879 | 165 | 20 | 0 | 2072 | 2236 | 55161762 | 55161926 | 6.390000e-46 | 195.0 |
20 | TraesCS5B01G509000 | chr2B | 83.636 | 165 | 27 | 0 | 2072 | 2236 | 116849088 | 116849252 | 3.010000e-34 | 156.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G509000 | chr5B | 674266259 | 674268525 | 2266 | False | 4187.000 | 4187 | 100.0000 | 1 | 2267 | 1 | chr5B.!!$F1 | 2266 |
1 | TraesCS5B01G509000 | chr5D | 534003429 | 534005347 | 1918 | False | 398.125 | 900 | 88.7755 | 372 | 2266 | 4 | chr5D.!!$F2 | 1894 |
2 | TraesCS5B01G509000 | chr4A | 637923770 | 637924316 | 546 | True | 664.000 | 664 | 88.5920 | 1710 | 2265 | 1 | chr4A.!!$R2 | 555 |
3 | TraesCS5B01G509000 | chr4A | 637929617 | 637930890 | 1273 | True | 370.000 | 481 | 86.1860 | 375 | 1275 | 2 | chr4A.!!$R3 | 900 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
129 | 130 | 0.191064 | TGTCTTGGTCCTGGACTCCT | 59.809 | 55.0 | 25.01 | 0.0 | 32.47 | 3.69 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1633 | 2082 | 0.105504 | AACTTTGCCCTCCCAGCTTT | 60.106 | 50.0 | 0.0 | 0.0 | 0.0 | 3.51 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
103 | 104 | 7.423844 | TCTACATATATGTGATGGGCTTAGG | 57.576 | 40.000 | 25.48 | 4.36 | 41.89 | 2.69 |
104 | 105 | 4.848357 | ACATATATGTGATGGGCTTAGGC | 58.152 | 43.478 | 17.60 | 0.00 | 40.03 | 3.93 |
117 | 118 | 2.019984 | GCTTAGGCCATCTTGTCTTGG | 58.980 | 52.381 | 5.01 | 0.00 | 36.03 | 3.61 |
118 | 119 | 2.619074 | GCTTAGGCCATCTTGTCTTGGT | 60.619 | 50.000 | 5.01 | 0.00 | 35.34 | 3.67 |
119 | 120 | 3.274288 | CTTAGGCCATCTTGTCTTGGTC | 58.726 | 50.000 | 5.01 | 0.00 | 37.91 | 4.02 |
120 | 121 | 0.329596 | AGGCCATCTTGTCTTGGTCC | 59.670 | 55.000 | 5.01 | 0.00 | 38.42 | 4.46 |
121 | 122 | 0.329596 | GGCCATCTTGTCTTGGTCCT | 59.670 | 55.000 | 0.00 | 0.00 | 35.34 | 3.85 |
122 | 123 | 1.457346 | GCCATCTTGTCTTGGTCCTG | 58.543 | 55.000 | 0.00 | 0.00 | 35.34 | 3.86 |
123 | 124 | 1.952367 | GCCATCTTGTCTTGGTCCTGG | 60.952 | 57.143 | 0.00 | 0.00 | 35.34 | 4.45 |
124 | 125 | 1.630369 | CCATCTTGTCTTGGTCCTGGA | 59.370 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
125 | 126 | 2.616510 | CCATCTTGTCTTGGTCCTGGAC | 60.617 | 54.545 | 18.65 | 18.65 | 0.00 | 4.02 |
126 | 127 | 2.103153 | TCTTGTCTTGGTCCTGGACT | 57.897 | 50.000 | 25.01 | 0.00 | 32.47 | 3.85 |
127 | 128 | 1.971357 | TCTTGTCTTGGTCCTGGACTC | 59.029 | 52.381 | 25.01 | 15.85 | 32.47 | 3.36 |
128 | 129 | 1.002544 | CTTGTCTTGGTCCTGGACTCC | 59.997 | 57.143 | 25.01 | 11.37 | 32.47 | 3.85 |
129 | 130 | 0.191064 | TGTCTTGGTCCTGGACTCCT | 59.809 | 55.000 | 25.01 | 0.00 | 32.47 | 3.69 |
130 | 131 | 0.610687 | GTCTTGGTCCTGGACTCCTG | 59.389 | 60.000 | 25.01 | 13.35 | 32.47 | 3.86 |
131 | 132 | 0.545309 | TCTTGGTCCTGGACTCCTGG | 60.545 | 60.000 | 25.01 | 13.77 | 42.93 | 4.45 |
132 | 133 | 1.538876 | TTGGTCCTGGACTCCTGGG | 60.539 | 63.158 | 25.01 | 10.35 | 42.03 | 4.45 |
133 | 134 | 3.403558 | GGTCCTGGACTCCTGGGC | 61.404 | 72.222 | 25.01 | 17.17 | 44.87 | 5.36 |
134 | 135 | 2.607750 | GTCCTGGACTCCTGGGCA | 60.608 | 66.667 | 19.53 | 0.14 | 44.94 | 5.36 |
135 | 136 | 2.607750 | TCCTGGACTCCTGGGCAC | 60.608 | 66.667 | 18.53 | 0.00 | 42.03 | 5.01 |
136 | 137 | 4.087892 | CCTGGACTCCTGGGCACG | 62.088 | 72.222 | 12.37 | 0.00 | 38.71 | 5.34 |
137 | 138 | 3.314331 | CTGGACTCCTGGGCACGT | 61.314 | 66.667 | 0.00 | 0.00 | 0.00 | 4.49 |
138 | 139 | 3.302347 | CTGGACTCCTGGGCACGTC | 62.302 | 68.421 | 0.00 | 0.00 | 0.00 | 4.34 |
139 | 140 | 4.083862 | GGACTCCTGGGCACGTCC | 62.084 | 72.222 | 8.74 | 8.74 | 39.14 | 4.79 |
140 | 141 | 3.311110 | GACTCCTGGGCACGTCCA | 61.311 | 66.667 | 6.41 | 1.45 | 36.21 | 4.02 |
141 | 142 | 3.591254 | GACTCCTGGGCACGTCCAC | 62.591 | 68.421 | 6.41 | 0.00 | 36.21 | 4.02 |
142 | 143 | 3.314331 | CTCCTGGGCACGTCCACT | 61.314 | 66.667 | 6.41 | 0.00 | 36.21 | 4.00 |
143 | 144 | 2.847234 | TCCTGGGCACGTCCACTT | 60.847 | 61.111 | 6.41 | 0.00 | 36.21 | 3.16 |
144 | 145 | 2.669569 | CCTGGGCACGTCCACTTG | 60.670 | 66.667 | 6.41 | 0.00 | 36.21 | 3.16 |
145 | 146 | 2.669569 | CTGGGCACGTCCACTTGG | 60.670 | 66.667 | 6.41 | 0.00 | 36.21 | 3.61 |
146 | 147 | 4.947147 | TGGGCACGTCCACTTGGC | 62.947 | 66.667 | 1.49 | 1.49 | 39.44 | 4.52 |
147 | 148 | 4.643387 | GGGCACGTCCACTTGGCT | 62.643 | 66.667 | 9.23 | 0.00 | 39.94 | 4.75 |
148 | 149 | 2.345991 | GGCACGTCCACTTGGCTA | 59.654 | 61.111 | 2.84 | 0.00 | 37.63 | 3.93 |
149 | 150 | 2.033194 | GGCACGTCCACTTGGCTAC | 61.033 | 63.158 | 2.84 | 0.00 | 37.63 | 3.58 |
150 | 151 | 1.301401 | GCACGTCCACTTGGCTACA | 60.301 | 57.895 | 0.00 | 0.00 | 34.44 | 2.74 |
151 | 152 | 1.291877 | GCACGTCCACTTGGCTACAG | 61.292 | 60.000 | 0.00 | 0.00 | 34.44 | 2.74 |
152 | 153 | 0.670546 | CACGTCCACTTGGCTACAGG | 60.671 | 60.000 | 0.00 | 0.00 | 34.44 | 4.00 |
153 | 154 | 1.119574 | ACGTCCACTTGGCTACAGGT | 61.120 | 55.000 | 0.00 | 0.00 | 37.40 | 4.00 |
154 | 155 | 0.892755 | CGTCCACTTGGCTACAGGTA | 59.107 | 55.000 | 0.00 | 0.00 | 34.86 | 3.08 |
155 | 156 | 1.274167 | CGTCCACTTGGCTACAGGTAA | 59.726 | 52.381 | 0.00 | 0.00 | 34.86 | 2.85 |
156 | 157 | 2.093658 | CGTCCACTTGGCTACAGGTAAT | 60.094 | 50.000 | 0.00 | 0.00 | 34.86 | 1.89 |
157 | 158 | 3.532542 | GTCCACTTGGCTACAGGTAATC | 58.467 | 50.000 | 0.00 | 0.00 | 34.86 | 1.75 |
158 | 159 | 3.197983 | GTCCACTTGGCTACAGGTAATCT | 59.802 | 47.826 | 0.00 | 0.00 | 34.86 | 2.40 |
159 | 160 | 3.844211 | TCCACTTGGCTACAGGTAATCTT | 59.156 | 43.478 | 0.00 | 0.00 | 34.86 | 2.40 |
160 | 161 | 3.941483 | CCACTTGGCTACAGGTAATCTTG | 59.059 | 47.826 | 0.00 | 0.00 | 34.86 | 3.02 |
161 | 162 | 4.565652 | CCACTTGGCTACAGGTAATCTTGT | 60.566 | 45.833 | 0.00 | 0.00 | 34.86 | 3.16 |
162 | 163 | 4.393062 | CACTTGGCTACAGGTAATCTTGTG | 59.607 | 45.833 | 0.00 | 0.00 | 34.86 | 3.33 |
163 | 164 | 3.627395 | TGGCTACAGGTAATCTTGTGG | 57.373 | 47.619 | 0.00 | 0.00 | 35.54 | 4.17 |
164 | 165 | 3.178046 | TGGCTACAGGTAATCTTGTGGA | 58.822 | 45.455 | 0.00 | 0.00 | 34.95 | 4.02 |
165 | 166 | 3.780294 | TGGCTACAGGTAATCTTGTGGAT | 59.220 | 43.478 | 0.00 | 0.00 | 34.95 | 3.41 |
166 | 167 | 4.227300 | TGGCTACAGGTAATCTTGTGGATT | 59.773 | 41.667 | 0.00 | 0.00 | 45.53 | 3.01 |
167 | 168 | 5.193679 | GGCTACAGGTAATCTTGTGGATTT | 58.806 | 41.667 | 0.00 | 0.00 | 41.42 | 2.17 |
168 | 169 | 5.652452 | GGCTACAGGTAATCTTGTGGATTTT | 59.348 | 40.000 | 0.00 | 0.00 | 41.42 | 1.82 |
169 | 170 | 6.404734 | GGCTACAGGTAATCTTGTGGATTTTG | 60.405 | 42.308 | 0.00 | 0.00 | 41.42 | 2.44 |
170 | 171 | 6.151144 | GCTACAGGTAATCTTGTGGATTTTGT | 59.849 | 38.462 | 0.00 | 0.00 | 41.42 | 2.83 |
171 | 172 | 7.335924 | GCTACAGGTAATCTTGTGGATTTTGTA | 59.664 | 37.037 | 0.00 | 0.00 | 41.42 | 2.41 |
172 | 173 | 9.396022 | CTACAGGTAATCTTGTGGATTTTGTAT | 57.604 | 33.333 | 0.00 | 0.00 | 41.42 | 2.29 |
173 | 174 | 8.055279 | ACAGGTAATCTTGTGGATTTTGTATG | 57.945 | 34.615 | 0.00 | 0.00 | 41.42 | 2.39 |
174 | 175 | 7.888021 | ACAGGTAATCTTGTGGATTTTGTATGA | 59.112 | 33.333 | 0.00 | 0.00 | 41.42 | 2.15 |
175 | 176 | 8.184192 | CAGGTAATCTTGTGGATTTTGTATGAC | 58.816 | 37.037 | 0.00 | 0.00 | 41.42 | 3.06 |
176 | 177 | 7.888021 | AGGTAATCTTGTGGATTTTGTATGACA | 59.112 | 33.333 | 0.00 | 0.00 | 41.42 | 3.58 |
177 | 178 | 8.184192 | GGTAATCTTGTGGATTTTGTATGACAG | 58.816 | 37.037 | 0.00 | 0.00 | 41.42 | 3.51 |
178 | 179 | 8.946085 | GTAATCTTGTGGATTTTGTATGACAGA | 58.054 | 33.333 | 0.00 | 0.00 | 41.42 | 3.41 |
179 | 180 | 8.408043 | AATCTTGTGGATTTTGTATGACAGAA | 57.592 | 30.769 | 0.00 | 0.00 | 41.42 | 3.02 |
180 | 181 | 8.585471 | ATCTTGTGGATTTTGTATGACAGAAT | 57.415 | 30.769 | 0.00 | 0.00 | 35.88 | 2.40 |
181 | 182 | 8.408043 | TCTTGTGGATTTTGTATGACAGAATT | 57.592 | 30.769 | 0.00 | 0.00 | 33.70 | 2.17 |
182 | 183 | 8.298854 | TCTTGTGGATTTTGTATGACAGAATTG | 58.701 | 33.333 | 0.00 | 0.00 | 33.70 | 2.32 |
183 | 184 | 6.389091 | TGTGGATTTTGTATGACAGAATTGC | 58.611 | 36.000 | 0.00 | 0.00 | 33.70 | 3.56 |
184 | 185 | 5.807011 | GTGGATTTTGTATGACAGAATTGCC | 59.193 | 40.000 | 0.00 | 0.00 | 33.70 | 4.52 |
185 | 186 | 5.479724 | TGGATTTTGTATGACAGAATTGCCA | 59.520 | 36.000 | 0.00 | 0.00 | 33.70 | 4.92 |
186 | 187 | 6.038356 | GGATTTTGTATGACAGAATTGCCAG | 58.962 | 40.000 | 0.00 | 0.00 | 33.70 | 4.85 |
187 | 188 | 6.127647 | GGATTTTGTATGACAGAATTGCCAGA | 60.128 | 38.462 | 0.00 | 0.00 | 33.70 | 3.86 |
188 | 189 | 5.885230 | TTTGTATGACAGAATTGCCAGAG | 57.115 | 39.130 | 0.00 | 0.00 | 0.00 | 3.35 |
189 | 190 | 3.273434 | TGTATGACAGAATTGCCAGAGC | 58.727 | 45.455 | 0.00 | 0.00 | 40.48 | 4.09 |
198 | 199 | 2.679092 | TGCCAGAGCATTGGGGAG | 59.321 | 61.111 | 8.39 | 0.00 | 46.52 | 4.30 |
199 | 200 | 2.233566 | TGCCAGAGCATTGGGGAGT | 61.234 | 57.895 | 8.39 | 0.00 | 46.52 | 3.85 |
200 | 201 | 1.000396 | GCCAGAGCATTGGGGAGTT | 60.000 | 57.895 | 8.39 | 0.00 | 38.72 | 3.01 |
201 | 202 | 1.034292 | GCCAGAGCATTGGGGAGTTC | 61.034 | 60.000 | 8.39 | 0.00 | 38.72 | 3.01 |
202 | 203 | 0.329261 | CCAGAGCATTGGGGAGTTCA | 59.671 | 55.000 | 0.00 | 0.00 | 34.46 | 3.18 |
203 | 204 | 1.064166 | CCAGAGCATTGGGGAGTTCAT | 60.064 | 52.381 | 0.00 | 0.00 | 34.46 | 2.57 |
204 | 205 | 2.173356 | CCAGAGCATTGGGGAGTTCATA | 59.827 | 50.000 | 0.00 | 0.00 | 34.46 | 2.15 |
205 | 206 | 3.181436 | CCAGAGCATTGGGGAGTTCATAT | 60.181 | 47.826 | 0.00 | 0.00 | 34.46 | 1.78 |
206 | 207 | 4.467769 | CAGAGCATTGGGGAGTTCATATT | 58.532 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
207 | 208 | 4.891756 | CAGAGCATTGGGGAGTTCATATTT | 59.108 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
208 | 209 | 5.361857 | CAGAGCATTGGGGAGTTCATATTTT | 59.638 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
209 | 210 | 6.547141 | CAGAGCATTGGGGAGTTCATATTTTA | 59.453 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
210 | 211 | 7.232127 | CAGAGCATTGGGGAGTTCATATTTTAT | 59.768 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
211 | 212 | 8.448008 | AGAGCATTGGGGAGTTCATATTTTATA | 58.552 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
212 | 213 | 8.409358 | AGCATTGGGGAGTTCATATTTTATAC | 57.591 | 34.615 | 0.00 | 0.00 | 0.00 | 1.47 |
213 | 214 | 8.227507 | AGCATTGGGGAGTTCATATTTTATACT | 58.772 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
214 | 215 | 8.515414 | GCATTGGGGAGTTCATATTTTATACTC | 58.485 | 37.037 | 0.00 | 0.00 | 35.61 | 2.59 |
221 | 222 | 8.652290 | GGAGTTCATATTTTATACTCCCTCTGT | 58.348 | 37.037 | 8.10 | 0.00 | 45.84 | 3.41 |
224 | 225 | 9.274206 | GTTCATATTTTATACTCCCTCTGTTCC | 57.726 | 37.037 | 0.00 | 0.00 | 0.00 | 3.62 |
225 | 226 | 8.798975 | TCATATTTTATACTCCCTCTGTTCCT | 57.201 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
226 | 227 | 9.892444 | TCATATTTTATACTCCCTCTGTTCCTA | 57.108 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
230 | 231 | 9.853177 | ATTTTATACTCCCTCTGTTCCTAAATG | 57.147 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
231 | 232 | 7.989947 | TTATACTCCCTCTGTTCCTAAATGT | 57.010 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
232 | 233 | 9.496710 | TTTATACTCCCTCTGTTCCTAAATGTA | 57.503 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
233 | 234 | 7.989947 | ATACTCCCTCTGTTCCTAAATGTAA | 57.010 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
234 | 235 | 6.301169 | ACTCCCTCTGTTCCTAAATGTAAG | 57.699 | 41.667 | 0.00 | 0.00 | 0.00 | 2.34 |
235 | 236 | 5.785940 | ACTCCCTCTGTTCCTAAATGTAAGT | 59.214 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
236 | 237 | 6.070710 | ACTCCCTCTGTTCCTAAATGTAAGTC | 60.071 | 42.308 | 0.00 | 0.00 | 0.00 | 3.01 |
237 | 238 | 6.023603 | TCCCTCTGTTCCTAAATGTAAGTCT | 58.976 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
238 | 239 | 6.500751 | TCCCTCTGTTCCTAAATGTAAGTCTT | 59.499 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
239 | 240 | 7.017254 | TCCCTCTGTTCCTAAATGTAAGTCTTT | 59.983 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
240 | 241 | 7.665974 | CCCTCTGTTCCTAAATGTAAGTCTTTT | 59.334 | 37.037 | 0.00 | 0.00 | 0.00 | 2.27 |
241 | 242 | 9.067986 | CCTCTGTTCCTAAATGTAAGTCTTTTT | 57.932 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
255 | 256 | 9.924650 | TGTAAGTCTTTTTAGAGATTCCACTAC | 57.075 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
256 | 257 | 9.924650 | GTAAGTCTTTTTAGAGATTCCACTACA | 57.075 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
258 | 259 | 9.847224 | AAGTCTTTTTAGAGATTCCACTACAAA | 57.153 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
259 | 260 | 9.274206 | AGTCTTTTTAGAGATTCCACTACAAAC | 57.726 | 33.333 | 0.00 | 0.00 | 0.00 | 2.93 |
260 | 261 | 9.274206 | GTCTTTTTAGAGATTCCACTACAAACT | 57.726 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
267 | 268 | 7.481642 | AGAGATTCCACTACAAACTACATACG | 58.518 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
268 | 269 | 6.570692 | AGATTCCACTACAAACTACATACGG | 58.429 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
269 | 270 | 5.981088 | TTCCACTACAAACTACATACGGA | 57.019 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
270 | 271 | 6.534475 | TTCCACTACAAACTACATACGGAT | 57.466 | 37.500 | 0.00 | 0.00 | 0.00 | 4.18 |
271 | 272 | 5.898174 | TCCACTACAAACTACATACGGATG | 58.102 | 41.667 | 5.94 | 5.94 | 39.16 | 3.51 |
273 | 274 | 6.602803 | TCCACTACAAACTACATACGGATGTA | 59.397 | 38.462 | 19.32 | 19.32 | 44.77 | 2.29 |
274 | 275 | 7.286087 | TCCACTACAAACTACATACGGATGTAT | 59.714 | 37.037 | 20.64 | 8.38 | 45.42 | 2.29 |
275 | 276 | 8.570488 | CCACTACAAACTACATACGGATGTATA | 58.430 | 37.037 | 20.64 | 9.08 | 45.42 | 1.47 |
302 | 303 | 8.635877 | AGACATATTTTCGAGTGTAGATTCAC | 57.364 | 34.615 | 0.00 | 0.00 | 38.46 | 3.18 |
313 | 314 | 6.734104 | AGTGTAGATTCACTCATTTTGCTC | 57.266 | 37.500 | 0.00 | 0.00 | 44.07 | 4.26 |
314 | 315 | 5.645497 | AGTGTAGATTCACTCATTTTGCTCC | 59.355 | 40.000 | 0.00 | 0.00 | 44.07 | 4.70 |
315 | 316 | 5.412594 | GTGTAGATTCACTCATTTTGCTCCA | 59.587 | 40.000 | 0.00 | 0.00 | 35.68 | 3.86 |
316 | 317 | 6.094603 | GTGTAGATTCACTCATTTTGCTCCAT | 59.905 | 38.462 | 0.00 | 0.00 | 35.68 | 3.41 |
317 | 318 | 7.280876 | GTGTAGATTCACTCATTTTGCTCCATA | 59.719 | 37.037 | 0.00 | 0.00 | 35.68 | 2.74 |
318 | 319 | 7.994911 | TGTAGATTCACTCATTTTGCTCCATAT | 59.005 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
319 | 320 | 7.273320 | AGATTCACTCATTTTGCTCCATATG | 57.727 | 36.000 | 0.00 | 0.00 | 0.00 | 1.78 |
320 | 321 | 6.832384 | AGATTCACTCATTTTGCTCCATATGT | 59.168 | 34.615 | 1.24 | 0.00 | 0.00 | 2.29 |
321 | 322 | 7.994911 | AGATTCACTCATTTTGCTCCATATGTA | 59.005 | 33.333 | 1.24 | 0.00 | 0.00 | 2.29 |
322 | 323 | 7.558161 | TTCACTCATTTTGCTCCATATGTAG | 57.442 | 36.000 | 1.24 | 0.00 | 0.00 | 2.74 |
323 | 324 | 6.653020 | TCACTCATTTTGCTCCATATGTAGT | 58.347 | 36.000 | 1.24 | 0.00 | 0.00 | 2.73 |
324 | 325 | 6.763135 | TCACTCATTTTGCTCCATATGTAGTC | 59.237 | 38.462 | 1.24 | 0.00 | 0.00 | 2.59 |
325 | 326 | 6.017605 | CACTCATTTTGCTCCATATGTAGTCC | 60.018 | 42.308 | 1.24 | 0.00 | 0.00 | 3.85 |
326 | 327 | 6.000246 | TCATTTTGCTCCATATGTAGTCCA | 58.000 | 37.500 | 1.24 | 0.00 | 0.00 | 4.02 |
327 | 328 | 6.604171 | TCATTTTGCTCCATATGTAGTCCAT | 58.396 | 36.000 | 1.24 | 0.00 | 37.58 | 3.41 |
328 | 329 | 7.744733 | TCATTTTGCTCCATATGTAGTCCATA | 58.255 | 34.615 | 1.24 | 0.00 | 40.27 | 2.74 |
329 | 330 | 7.879677 | TCATTTTGCTCCATATGTAGTCCATAG | 59.120 | 37.037 | 1.24 | 0.00 | 39.36 | 2.23 |
330 | 331 | 6.747414 | TTTGCTCCATATGTAGTCCATAGT | 57.253 | 37.500 | 1.24 | 0.00 | 39.36 | 2.12 |
331 | 332 | 7.849322 | TTTGCTCCATATGTAGTCCATAGTA | 57.151 | 36.000 | 1.24 | 0.00 | 39.36 | 1.82 |
332 | 333 | 7.468141 | TTGCTCCATATGTAGTCCATAGTAG | 57.532 | 40.000 | 1.24 | 0.00 | 39.36 | 2.57 |
333 | 334 | 6.790319 | TGCTCCATATGTAGTCCATAGTAGA | 58.210 | 40.000 | 1.24 | 0.00 | 39.36 | 2.59 |
334 | 335 | 7.238710 | TGCTCCATATGTAGTCCATAGTAGAA | 58.761 | 38.462 | 1.24 | 0.00 | 39.36 | 2.10 |
335 | 336 | 7.895962 | TGCTCCATATGTAGTCCATAGTAGAAT | 59.104 | 37.037 | 1.24 | 0.00 | 39.36 | 2.40 |
336 | 337 | 8.410141 | GCTCCATATGTAGTCCATAGTAGAATC | 58.590 | 40.741 | 1.24 | 0.00 | 39.36 | 2.52 |
337 | 338 | 9.693739 | CTCCATATGTAGTCCATAGTAGAATCT | 57.306 | 37.037 | 1.24 | 0.00 | 39.36 | 2.40 |
338 | 339 | 9.688091 | TCCATATGTAGTCCATAGTAGAATCTC | 57.312 | 37.037 | 1.24 | 0.00 | 39.36 | 2.75 |
339 | 340 | 9.693739 | CCATATGTAGTCCATAGTAGAATCTCT | 57.306 | 37.037 | 1.24 | 0.00 | 39.36 | 3.10 |
367 | 368 | 8.507524 | AAAGACTTAAATTTAGGAATCGAGGG | 57.492 | 34.615 | 13.73 | 0.00 | 0.00 | 4.30 |
368 | 369 | 7.433537 | AGACTTAAATTTAGGAATCGAGGGA | 57.566 | 36.000 | 13.73 | 0.00 | 0.00 | 4.20 |
369 | 370 | 7.501844 | AGACTTAAATTTAGGAATCGAGGGAG | 58.498 | 38.462 | 13.73 | 0.00 | 0.00 | 4.30 |
370 | 371 | 7.125963 | AGACTTAAATTTAGGAATCGAGGGAGT | 59.874 | 37.037 | 13.73 | 2.90 | 0.00 | 3.85 |
371 | 372 | 8.315220 | ACTTAAATTTAGGAATCGAGGGAGTA | 57.685 | 34.615 | 13.73 | 0.00 | 0.00 | 2.59 |
372 | 373 | 8.935741 | ACTTAAATTTAGGAATCGAGGGAGTAT | 58.064 | 33.333 | 13.73 | 0.00 | 0.00 | 2.12 |
455 | 461 | 1.289276 | GCCACTTGTTTTGCCTTGTG | 58.711 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
522 | 531 | 3.909574 | ACGACCGAAAAATAACATTTGCG | 59.090 | 39.130 | 0.00 | 0.00 | 40.32 | 4.85 |
523 | 532 | 4.152526 | CGACCGAAAAATAACATTTGCGA | 58.847 | 39.130 | 1.88 | 0.00 | 42.69 | 5.10 |
569 | 595 | 2.785713 | TTTTACCTCGTGCCAAAAGC | 57.214 | 45.000 | 0.00 | 0.00 | 44.14 | 3.51 |
589 | 615 | 3.995048 | AGCGCTGTGATAATCTCATGATG | 59.005 | 43.478 | 10.39 | 0.00 | 35.97 | 3.07 |
621 | 681 | 5.688348 | GACATTACTCGTTCATGTCAGTC | 57.312 | 43.478 | 13.19 | 0.00 | 44.24 | 3.51 |
632 | 692 | 3.361786 | TCATGTCAGTCGGTTATCCTCA | 58.638 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
654 | 714 | 5.899120 | ACAACTAGTGTGATCTATCGTGT | 57.101 | 39.130 | 0.00 | 0.00 | 39.72 | 4.49 |
656 | 716 | 5.414765 | ACAACTAGTGTGATCTATCGTGTCA | 59.585 | 40.000 | 0.00 | 0.00 | 39.72 | 3.58 |
657 | 717 | 6.072119 | ACAACTAGTGTGATCTATCGTGTCAA | 60.072 | 38.462 | 0.00 | 0.00 | 39.72 | 3.18 |
679 | 739 | 3.653539 | AAACGTCTTACATTTTGGGGC | 57.346 | 42.857 | 0.00 | 0.00 | 0.00 | 5.80 |
680 | 740 | 1.541379 | ACGTCTTACATTTTGGGGCC | 58.459 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
681 | 741 | 0.450184 | CGTCTTACATTTTGGGGCCG | 59.550 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
682 | 742 | 1.828979 | GTCTTACATTTTGGGGCCGA | 58.171 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
683 | 743 | 1.743394 | GTCTTACATTTTGGGGCCGAG | 59.257 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
684 | 744 | 1.102978 | CTTACATTTTGGGGCCGAGG | 58.897 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
685 | 745 | 0.323908 | TTACATTTTGGGGCCGAGGG | 60.324 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
687 | 747 | 1.754234 | CATTTTGGGGCCGAGGGAG | 60.754 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
690 | 750 | 0.917333 | TTTTGGGGCCGAGGGAGTAT | 60.917 | 55.000 | 0.00 | 0.00 | 0.00 | 2.12 |
691 | 751 | 1.342672 | TTTGGGGCCGAGGGAGTATC | 61.343 | 60.000 | 0.00 | 0.00 | 0.00 | 2.24 |
692 | 752 | 3.303928 | GGGGCCGAGGGAGTATCG | 61.304 | 72.222 | 0.00 | 0.00 | 39.86 | 2.92 |
710 | 813 | 8.470002 | GGAGTATCGGGTAAAAGAAAACTAGTA | 58.530 | 37.037 | 0.00 | 0.00 | 34.37 | 1.82 |
711 | 814 | 9.513727 | GAGTATCGGGTAAAAGAAAACTAGTAG | 57.486 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
712 | 815 | 9.029368 | AGTATCGGGTAAAAGAAAACTAGTAGT | 57.971 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
713 | 816 | 9.080915 | GTATCGGGTAAAAGAAAACTAGTAGTG | 57.919 | 37.037 | 2.90 | 0.00 | 0.00 | 2.74 |
715 | 818 | 6.925165 | TCGGGTAAAAGAAAACTAGTAGTGTG | 59.075 | 38.462 | 2.90 | 0.00 | 0.00 | 3.82 |
718 | 825 | 9.933723 | GGGTAAAAGAAAACTAGTAGTGTGATA | 57.066 | 33.333 | 2.90 | 0.00 | 0.00 | 2.15 |
771 | 1146 | 1.792757 | ATGGTCTCAGCTGGCCCAAA | 61.793 | 55.000 | 15.13 | 0.00 | 0.00 | 3.28 |
774 | 1149 | 0.250901 | GTCTCAGCTGGCCCAAAGAA | 60.251 | 55.000 | 15.13 | 0.00 | 0.00 | 2.52 |
822 | 1219 | 2.600731 | CCAAGCACTACTGACGAAGAG | 58.399 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
823 | 1220 | 2.229062 | CCAAGCACTACTGACGAAGAGA | 59.771 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
965 | 1414 | 2.543587 | GCACGTTGCATTTCGATCG | 58.456 | 52.632 | 9.36 | 9.36 | 44.26 | 3.69 |
966 | 1415 | 1.455908 | GCACGTTGCATTTCGATCGC | 61.456 | 55.000 | 11.09 | 0.00 | 44.26 | 4.58 |
967 | 1416 | 1.058748 | ACGTTGCATTTCGATCGCG | 59.941 | 52.632 | 11.09 | 8.10 | 39.35 | 5.87 |
968 | 1417 | 1.648165 | CGTTGCATTTCGATCGCGG | 60.648 | 57.895 | 11.09 | 0.40 | 38.28 | 6.46 |
969 | 1418 | 1.934476 | GTTGCATTTCGATCGCGGC | 60.934 | 57.895 | 11.09 | 11.30 | 38.28 | 6.53 |
970 | 1419 | 2.394563 | TTGCATTTCGATCGCGGCA | 61.395 | 52.632 | 11.09 | 13.77 | 38.28 | 5.69 |
971 | 1420 | 2.351210 | GCATTTCGATCGCGGCAC | 60.351 | 61.111 | 11.09 | 0.00 | 38.28 | 5.01 |
972 | 1421 | 3.088914 | CATTTCGATCGCGGCACA | 58.911 | 55.556 | 11.09 | 0.00 | 38.28 | 4.57 |
973 | 1422 | 1.296867 | CATTTCGATCGCGGCACAC | 60.297 | 57.895 | 11.09 | 0.00 | 38.28 | 3.82 |
974 | 1423 | 2.461110 | ATTTCGATCGCGGCACACC | 61.461 | 57.895 | 11.09 | 0.00 | 38.28 | 4.16 |
988 | 1437 | 0.246635 | CACACCGAGGTAACAGAGGG | 59.753 | 60.000 | 0.00 | 0.00 | 41.41 | 4.30 |
990 | 1439 | 0.818296 | CACCGAGGTAACAGAGGGAG | 59.182 | 60.000 | 0.00 | 0.00 | 41.41 | 4.30 |
999 | 1448 | 0.787084 | AACAGAGGGAGGGAGAGACA | 59.213 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1300 | 1749 | 4.492160 | GATCGACTCGTGCCGCCA | 62.492 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
1301 | 1750 | 4.796231 | ATCGACTCGTGCCGCCAC | 62.796 | 66.667 | 0.00 | 0.00 | 38.62 | 5.01 |
1309 | 1758 | 4.322385 | GTGCCGCCACGAACCAAC | 62.322 | 66.667 | 0.00 | 0.00 | 31.34 | 3.77 |
1315 | 1764 | 3.708734 | CCACGAACCAACGCCGTC | 61.709 | 66.667 | 0.00 | 0.00 | 33.96 | 4.79 |
1316 | 1765 | 2.962786 | CACGAACCAACGCCGTCA | 60.963 | 61.111 | 0.00 | 0.00 | 33.96 | 4.35 |
1339 | 1788 | 2.324477 | GCGTATCACATGGCGTGC | 59.676 | 61.111 | 6.62 | 0.00 | 45.92 | 5.34 |
1344 | 1793 | 1.024046 | TATCACATGGCGTGCGCTTT | 61.024 | 50.000 | 16.21 | 1.53 | 45.92 | 3.51 |
1357 | 1806 | 3.353836 | GCTTTGACCGCTTCGCCA | 61.354 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
1358 | 1807 | 2.690778 | GCTTTGACCGCTTCGCCAT | 61.691 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
1360 | 1809 | 1.003839 | TTTGACCGCTTCGCCATCT | 60.004 | 52.632 | 0.00 | 0.00 | 0.00 | 2.90 |
1361 | 1810 | 0.605319 | TTTGACCGCTTCGCCATCTT | 60.605 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
1362 | 1811 | 1.298157 | TTGACCGCTTCGCCATCTTG | 61.298 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1363 | 1812 | 1.447838 | GACCGCTTCGCCATCTTGA | 60.448 | 57.895 | 0.00 | 0.00 | 0.00 | 3.02 |
1364 | 1813 | 1.424493 | GACCGCTTCGCCATCTTGAG | 61.424 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1389 | 1838 | 8.902806 | AGTGTTCATAATGTTTCTGTTTTCTCA | 58.097 | 29.630 | 0.00 | 0.00 | 0.00 | 3.27 |
1391 | 1840 | 9.897744 | TGTTCATAATGTTTCTGTTTTCTCATC | 57.102 | 29.630 | 0.00 | 0.00 | 0.00 | 2.92 |
1398 | 1847 | 9.741647 | AATGTTTCTGTTTTCTCATCTCTTTTC | 57.258 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
1399 | 1848 | 8.511604 | TGTTTCTGTTTTCTCATCTCTTTTCT | 57.488 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
1400 | 1849 | 8.960591 | TGTTTCTGTTTTCTCATCTCTTTTCTT | 58.039 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1401 | 1850 | 9.444534 | GTTTCTGTTTTCTCATCTCTTTTCTTC | 57.555 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
1402 | 1851 | 8.970859 | TTCTGTTTTCTCATCTCTTTTCTTCT | 57.029 | 30.769 | 0.00 | 0.00 | 0.00 | 2.85 |
1403 | 1852 | 8.970859 | TCTGTTTTCTCATCTCTTTTCTTCTT | 57.029 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
1404 | 1853 | 9.050601 | TCTGTTTTCTCATCTCTTTTCTTCTTC | 57.949 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
1405 | 1854 | 8.970859 | TGTTTTCTCATCTCTTTTCTTCTTCT | 57.029 | 30.769 | 0.00 | 0.00 | 0.00 | 2.85 |
1406 | 1855 | 9.401058 | TGTTTTCTCATCTCTTTTCTTCTTCTT | 57.599 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1407 | 1856 | 9.877137 | GTTTTCTCATCTCTTTTCTTCTTCTTC | 57.123 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
1408 | 1857 | 9.844257 | TTTTCTCATCTCTTTTCTTCTTCTTCT | 57.156 | 29.630 | 0.00 | 0.00 | 0.00 | 2.85 |
1409 | 1858 | 9.844257 | TTTCTCATCTCTTTTCTTCTTCTTCTT | 57.156 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1410 | 1859 | 9.844257 | TTCTCATCTCTTTTCTTCTTCTTCTTT | 57.156 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1411 | 1860 | 9.844257 | TCTCATCTCTTTTCTTCTTCTTCTTTT | 57.156 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
1413 | 1862 | 9.844257 | TCATCTCTTTTCTTCTTCTTCTTTTCT | 57.156 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1416 | 1865 | 9.114952 | TCTCTTTTCTTCTTCTTCTTTTCTTCC | 57.885 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
1419 | 1868 | 5.646692 | TCTTCTTCTTCTTTTCTTCCCCA | 57.353 | 39.130 | 0.00 | 0.00 | 0.00 | 4.96 |
1425 | 1874 | 4.324267 | TCTTCTTTTCTTCCCCATCGTTC | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 3.95 |
1432 | 1881 | 4.417426 | TCTTCCCCATCGTTCCTTATTC | 57.583 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
1438 | 1887 | 5.955355 | TCCCCATCGTTCCTTATTCATTTTT | 59.045 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
1476 | 1925 | 2.745102 | CAATCATGCAAGCAACACACA | 58.255 | 42.857 | 0.00 | 0.00 | 0.00 | 3.72 |
1477 | 1926 | 2.717580 | ATCATGCAAGCAACACACAG | 57.282 | 45.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1478 | 1927 | 1.677942 | TCATGCAAGCAACACACAGA | 58.322 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1479 | 1928 | 2.022934 | TCATGCAAGCAACACACAGAA | 58.977 | 42.857 | 0.00 | 0.00 | 0.00 | 3.02 |
1480 | 1929 | 2.426381 | TCATGCAAGCAACACACAGAAA | 59.574 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
1481 | 1930 | 3.119209 | TCATGCAAGCAACACACAGAAAA | 60.119 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
1482 | 1931 | 2.878580 | TGCAAGCAACACACAGAAAAG | 58.121 | 42.857 | 0.00 | 0.00 | 0.00 | 2.27 |
1483 | 1932 | 2.491298 | TGCAAGCAACACACAGAAAAGA | 59.509 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
1487 | 1936 | 5.668621 | GCAAGCAACACACAGAAAAGAAAAC | 60.669 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
1489 | 1938 | 3.303229 | GCAACACACAGAAAAGAAAACCG | 59.697 | 43.478 | 0.00 | 0.00 | 0.00 | 4.44 |
1493 | 1942 | 4.102649 | CACACAGAAAAGAAAACCGTTCC | 58.897 | 43.478 | 0.00 | 0.00 | 0.00 | 3.62 |
1500 | 1949 | 6.419710 | CAGAAAAGAAAACCGTTCCAATAACC | 59.580 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
1523 | 1972 | 2.787259 | TTTTTCCTCGACGACGACG | 58.213 | 52.632 | 13.39 | 13.39 | 43.81 | 5.12 |
1524 | 1973 | 0.307453 | TTTTTCCTCGACGACGACGA | 59.693 | 50.000 | 20.18 | 20.18 | 43.81 | 4.20 |
1525 | 1974 | 0.384725 | TTTTCCTCGACGACGACGAC | 60.385 | 55.000 | 17.84 | 7.02 | 43.81 | 4.34 |
1537 | 1986 | 2.536329 | CGACGACGACGACATCATACTT | 60.536 | 50.000 | 15.32 | 0.00 | 42.66 | 2.24 |
1540 | 1989 | 4.232221 | ACGACGACGACATCATACTTTTT | 58.768 | 39.130 | 15.32 | 0.00 | 42.66 | 1.94 |
1565 | 2014 | 4.786507 | TCTTTTGATTGATGAGTTGCGTG | 58.213 | 39.130 | 0.00 | 0.00 | 0.00 | 5.34 |
1595 | 2044 | 1.940883 | AACTCTGCGGCAATGCATGG | 61.941 | 55.000 | 7.79 | 0.00 | 45.26 | 3.66 |
1605 | 2054 | 1.069091 | GCAATGCATGGCCACAAAAAC | 60.069 | 47.619 | 15.73 | 0.00 | 0.00 | 2.43 |
1606 | 2055 | 1.536331 | CAATGCATGGCCACAAAAACC | 59.464 | 47.619 | 8.16 | 0.00 | 0.00 | 3.27 |
1607 | 2056 | 1.058284 | ATGCATGGCCACAAAAACCT | 58.942 | 45.000 | 8.16 | 0.00 | 0.00 | 3.50 |
1608 | 2057 | 0.106335 | TGCATGGCCACAAAAACCTG | 59.894 | 50.000 | 8.16 | 0.00 | 0.00 | 4.00 |
1631 | 2080 | 1.287425 | GTAGTCCATGCGCTTGGTAC | 58.713 | 55.000 | 33.70 | 28.48 | 38.01 | 3.34 |
1632 | 2081 | 0.177141 | TAGTCCATGCGCTTGGTACC | 59.823 | 55.000 | 33.70 | 24.09 | 38.01 | 3.34 |
1633 | 2082 | 1.376683 | GTCCATGCGCTTGGTACCA | 60.377 | 57.895 | 33.70 | 11.60 | 38.01 | 3.25 |
1634 | 2083 | 0.958382 | GTCCATGCGCTTGGTACCAA | 60.958 | 55.000 | 33.70 | 25.58 | 38.01 | 3.67 |
1650 | 2099 | 1.538687 | CCAAAGCTGGGAGGGCAAAG | 61.539 | 60.000 | 0.00 | 0.00 | 39.30 | 2.77 |
1659 | 2108 | 2.714250 | TGGGAGGGCAAAGTTTCTAGAA | 59.286 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
1660 | 2109 | 3.333680 | TGGGAGGGCAAAGTTTCTAGAAT | 59.666 | 43.478 | 5.89 | 0.00 | 0.00 | 2.40 |
1661 | 2110 | 3.948473 | GGGAGGGCAAAGTTTCTAGAATC | 59.052 | 47.826 | 5.89 | 5.69 | 0.00 | 2.52 |
1662 | 2111 | 4.324641 | GGGAGGGCAAAGTTTCTAGAATCT | 60.325 | 45.833 | 5.89 | 8.14 | 0.00 | 2.40 |
1663 | 2112 | 5.104485 | GGGAGGGCAAAGTTTCTAGAATCTA | 60.104 | 44.000 | 14.92 | 0.00 | 0.00 | 1.98 |
1664 | 2113 | 6.052360 | GGAGGGCAAAGTTTCTAGAATCTAG | 58.948 | 44.000 | 14.92 | 10.93 | 0.00 | 2.43 |
1665 | 2114 | 6.127026 | GGAGGGCAAAGTTTCTAGAATCTAGA | 60.127 | 42.308 | 15.47 | 15.47 | 0.00 | 2.43 |
1669 | 2118 | 6.292596 | GGCAAAGTTTCTAGAATCTAGATGCG | 60.293 | 42.308 | 24.58 | 12.54 | 31.89 | 4.73 |
1678 | 2127 | 3.577848 | AGAATCTAGATGCGCCTCATTCT | 59.422 | 43.478 | 15.26 | 15.72 | 35.05 | 2.40 |
1684 | 2133 | 1.651240 | ATGCGCCTCATTCTGCACAC | 61.651 | 55.000 | 4.18 | 0.00 | 40.61 | 3.82 |
1685 | 2134 | 2.780643 | CGCCTCATTCTGCACACG | 59.219 | 61.111 | 0.00 | 0.00 | 0.00 | 4.49 |
1686 | 2135 | 2.482374 | GCCTCATTCTGCACACGC | 59.518 | 61.111 | 0.00 | 0.00 | 39.24 | 5.34 |
1688 | 2137 | 1.499056 | CCTCATTCTGCACACGCAC | 59.501 | 57.895 | 0.00 | 0.00 | 45.36 | 5.34 |
1693 | 2142 | 2.774044 | TTCTGCACACGCACAGAAA | 58.226 | 47.368 | 3.10 | 0.00 | 46.89 | 2.52 |
1700 | 2149 | 1.008538 | CACGCACAGAAACAAGCCC | 60.009 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
1707 | 2156 | 1.963515 | ACAGAAACAAGCCCCAATGTC | 59.036 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
1828 | 2278 | 4.880120 | CACACTAGAGGCATTCACATCAAT | 59.120 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
1831 | 2281 | 3.795623 | AGAGGCATTCACATCAATTGC | 57.204 | 42.857 | 0.00 | 0.00 | 0.00 | 3.56 |
1832 | 2282 | 2.429610 | AGAGGCATTCACATCAATTGCC | 59.570 | 45.455 | 0.00 | 4.10 | 40.90 | 4.52 |
1857 | 2307 | 4.002982 | GTGATGTTCAGGATAGCAACACA | 58.997 | 43.478 | 0.00 | 0.00 | 35.60 | 3.72 |
1893 | 2343 | 4.719916 | AGTTGTCGCGAACCGAGAAGTT | 62.720 | 50.000 | 12.06 | 0.00 | 46.79 | 2.66 |
1894 | 2344 | 4.546637 | TCGCGAACCGAGAAGTTC | 57.453 | 55.556 | 6.20 | 0.00 | 41.89 | 3.01 |
1912 | 2362 | 2.989166 | GTTCGAGAAACGTTATTCCCGT | 59.011 | 45.455 | 0.00 | 0.00 | 43.13 | 5.28 |
1949 | 2399 | 8.088981 | TCAAATCTCACTGGAGTAAACTACTTC | 58.911 | 37.037 | 0.00 | 0.00 | 42.05 | 3.01 |
1980 | 2433 | 2.633481 | ACTTGGCCCCGTAAGATAGATC | 59.367 | 50.000 | 7.51 | 0.00 | 43.02 | 2.75 |
1992 | 2445 | 3.219176 | AGATAGATCACGGGGTTACGA | 57.781 | 47.619 | 0.00 | 0.00 | 37.61 | 3.43 |
2027 | 2480 | 1.600957 | CGTTGCCCATCATCAGCTAAG | 59.399 | 52.381 | 0.00 | 0.00 | 0.00 | 2.18 |
2030 | 2483 | 1.236628 | GCCCATCATCAGCTAAGCAG | 58.763 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2051 | 2504 | 6.547510 | AGCAGTTCTCAACCATTAGAAGTTTT | 59.452 | 34.615 | 0.00 | 0.00 | 33.99 | 2.43 |
2052 | 2505 | 6.638468 | GCAGTTCTCAACCATTAGAAGTTTTG | 59.362 | 38.462 | 0.00 | 0.00 | 33.99 | 2.44 |
2053 | 2506 | 7.468631 | GCAGTTCTCAACCATTAGAAGTTTTGA | 60.469 | 37.037 | 0.00 | 0.00 | 33.99 | 2.69 |
2054 | 2507 | 8.072567 | CAGTTCTCAACCATTAGAAGTTTTGAG | 58.927 | 37.037 | 5.28 | 5.28 | 40.78 | 3.02 |
2055 | 2508 | 7.993183 | AGTTCTCAACCATTAGAAGTTTTGAGA | 59.007 | 33.333 | 8.99 | 8.99 | 44.42 | 3.27 |
2056 | 2509 | 7.730364 | TCTCAACCATTAGAAGTTTTGAGAC | 57.270 | 36.000 | 8.99 | 0.00 | 42.39 | 3.36 |
2057 | 2510 | 6.423905 | TCTCAACCATTAGAAGTTTTGAGACG | 59.576 | 38.462 | 8.99 | 0.00 | 42.39 | 4.18 |
2058 | 2511 | 5.049680 | TCAACCATTAGAAGTTTTGAGACGC | 60.050 | 40.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2062 | 2553 | 5.049405 | CCATTAGAAGTTTTGAGACGCTTGT | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2066 | 2557 | 4.508124 | AGAAGTTTTGAGACGCTTGTGTAG | 59.492 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
2076 | 2567 | 1.734047 | CGCTTGTGTAGGCTCTCAGAC | 60.734 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
2164 | 2655 | 2.738521 | TCCGCTGCGTCTTTGCTC | 60.739 | 61.111 | 21.59 | 0.00 | 35.36 | 4.26 |
2212 | 2703 | 1.014044 | TGAACGTTCGCAGCATCTCC | 61.014 | 55.000 | 22.48 | 0.00 | 0.00 | 3.71 |
2238 | 2729 | 3.751175 | TCTTCGATTTTGCCAACCTACAG | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
77 | 78 | 9.147732 | CCTAAGCCCATCACATATATGTAGATA | 57.852 | 37.037 | 17.86 | 5.15 | 39.39 | 1.98 |
78 | 79 | 7.419518 | GCCTAAGCCCATCACATATATGTAGAT | 60.420 | 40.741 | 17.86 | 17.80 | 39.39 | 1.98 |
79 | 80 | 6.127054 | GCCTAAGCCCATCACATATATGTAGA | 60.127 | 42.308 | 17.86 | 16.53 | 39.39 | 2.59 |
80 | 81 | 6.051717 | GCCTAAGCCCATCACATATATGTAG | 58.948 | 44.000 | 17.86 | 12.26 | 39.39 | 2.74 |
81 | 82 | 5.989477 | GCCTAAGCCCATCACATATATGTA | 58.011 | 41.667 | 17.86 | 7.59 | 39.39 | 2.29 |
82 | 83 | 4.848357 | GCCTAAGCCCATCACATATATGT | 58.152 | 43.478 | 12.75 | 12.75 | 42.84 | 2.29 |
97 | 98 | 2.019984 | CCAAGACAAGATGGCCTAAGC | 58.980 | 52.381 | 3.32 | 0.00 | 38.76 | 3.09 |
98 | 99 | 3.274288 | GACCAAGACAAGATGGCCTAAG | 58.726 | 50.000 | 3.32 | 0.00 | 40.51 | 2.18 |
99 | 100 | 2.026262 | GGACCAAGACAAGATGGCCTAA | 60.026 | 50.000 | 3.32 | 0.00 | 40.51 | 2.69 |
100 | 101 | 1.559682 | GGACCAAGACAAGATGGCCTA | 59.440 | 52.381 | 3.32 | 0.00 | 40.51 | 3.93 |
101 | 102 | 0.329596 | GGACCAAGACAAGATGGCCT | 59.670 | 55.000 | 3.32 | 0.00 | 40.51 | 5.19 |
102 | 103 | 0.329596 | AGGACCAAGACAAGATGGCC | 59.670 | 55.000 | 0.00 | 0.00 | 40.51 | 5.36 |
103 | 104 | 1.457346 | CAGGACCAAGACAAGATGGC | 58.543 | 55.000 | 0.00 | 0.00 | 40.51 | 4.40 |
104 | 105 | 1.630369 | TCCAGGACCAAGACAAGATGG | 59.370 | 52.381 | 0.00 | 0.00 | 42.60 | 3.51 |
105 | 106 | 2.304180 | AGTCCAGGACCAAGACAAGATG | 59.696 | 50.000 | 16.72 | 0.00 | 32.18 | 2.90 |
106 | 107 | 2.569404 | GAGTCCAGGACCAAGACAAGAT | 59.431 | 50.000 | 16.72 | 0.00 | 32.18 | 2.40 |
107 | 108 | 1.971357 | GAGTCCAGGACCAAGACAAGA | 59.029 | 52.381 | 16.72 | 0.00 | 32.18 | 3.02 |
108 | 109 | 1.002544 | GGAGTCCAGGACCAAGACAAG | 59.997 | 57.143 | 16.72 | 0.00 | 32.18 | 3.16 |
109 | 110 | 1.056660 | GGAGTCCAGGACCAAGACAA | 58.943 | 55.000 | 16.72 | 0.00 | 32.18 | 3.18 |
110 | 111 | 0.191064 | AGGAGTCCAGGACCAAGACA | 59.809 | 55.000 | 16.72 | 0.00 | 32.18 | 3.41 |
111 | 112 | 0.610687 | CAGGAGTCCAGGACCAAGAC | 59.389 | 60.000 | 16.72 | 5.92 | 32.18 | 3.01 |
112 | 113 | 0.545309 | CCAGGAGTCCAGGACCAAGA | 60.545 | 60.000 | 15.54 | 0.00 | 31.24 | 3.02 |
113 | 114 | 1.557269 | CCCAGGAGTCCAGGACCAAG | 61.557 | 65.000 | 21.88 | 0.78 | 31.24 | 3.61 |
114 | 115 | 1.538876 | CCCAGGAGTCCAGGACCAA | 60.539 | 63.158 | 21.88 | 0.00 | 31.24 | 3.67 |
115 | 116 | 2.122729 | CCCAGGAGTCCAGGACCA | 59.877 | 66.667 | 21.88 | 0.00 | 31.24 | 4.02 |
116 | 117 | 3.403558 | GCCCAGGAGTCCAGGACC | 61.404 | 72.222 | 21.88 | 8.62 | 31.24 | 4.46 |
117 | 118 | 2.607750 | TGCCCAGGAGTCCAGGAC | 60.608 | 66.667 | 21.88 | 12.25 | 31.24 | 3.85 |
118 | 119 | 2.607750 | GTGCCCAGGAGTCCAGGA | 60.608 | 66.667 | 21.88 | 3.01 | 31.24 | 3.86 |
119 | 120 | 4.087892 | CGTGCCCAGGAGTCCAGG | 62.088 | 72.222 | 13.73 | 13.73 | 0.00 | 4.45 |
120 | 121 | 3.302347 | GACGTGCCCAGGAGTCCAG | 62.302 | 68.421 | 12.86 | 2.60 | 0.00 | 3.86 |
121 | 122 | 3.311110 | GACGTGCCCAGGAGTCCA | 61.311 | 66.667 | 12.86 | 0.00 | 0.00 | 4.02 |
122 | 123 | 4.083862 | GGACGTGCCCAGGAGTCC | 62.084 | 72.222 | 0.00 | 0.00 | 45.07 | 3.85 |
123 | 124 | 3.311110 | TGGACGTGCCCAGGAGTC | 61.311 | 66.667 | 4.04 | 0.00 | 34.97 | 3.36 |
124 | 125 | 3.626924 | GTGGACGTGCCCAGGAGT | 61.627 | 66.667 | 4.04 | 0.00 | 36.78 | 3.85 |
125 | 126 | 2.883828 | AAGTGGACGTGCCCAGGAG | 61.884 | 63.158 | 4.04 | 0.00 | 36.78 | 3.69 |
126 | 127 | 2.847234 | AAGTGGACGTGCCCAGGA | 60.847 | 61.111 | 4.04 | 0.00 | 36.78 | 3.86 |
127 | 128 | 2.669569 | CAAGTGGACGTGCCCAGG | 60.670 | 66.667 | 4.04 | 0.00 | 36.78 | 4.45 |
128 | 129 | 2.669569 | CCAAGTGGACGTGCCCAG | 60.670 | 66.667 | 4.04 | 0.00 | 36.78 | 4.45 |
129 | 130 | 4.947147 | GCCAAGTGGACGTGCCCA | 62.947 | 66.667 | 4.04 | 0.00 | 37.39 | 5.36 |
130 | 131 | 3.248446 | TAGCCAAGTGGACGTGCCC | 62.248 | 63.158 | 4.04 | 0.00 | 37.39 | 5.36 |
131 | 132 | 2.033194 | GTAGCCAAGTGGACGTGCC | 61.033 | 63.158 | 4.04 | 0.43 | 37.39 | 5.01 |
132 | 133 | 1.291877 | CTGTAGCCAAGTGGACGTGC | 61.292 | 60.000 | 0.00 | 0.00 | 37.39 | 5.34 |
133 | 134 | 0.670546 | CCTGTAGCCAAGTGGACGTG | 60.671 | 60.000 | 0.18 | 0.00 | 37.39 | 4.49 |
134 | 135 | 1.119574 | ACCTGTAGCCAAGTGGACGT | 61.120 | 55.000 | 0.18 | 0.00 | 37.39 | 4.34 |
135 | 136 | 0.892755 | TACCTGTAGCCAAGTGGACG | 59.107 | 55.000 | 0.18 | 0.00 | 37.39 | 4.79 |
136 | 137 | 3.197983 | AGATTACCTGTAGCCAAGTGGAC | 59.802 | 47.826 | 0.18 | 0.00 | 37.39 | 4.02 |
137 | 138 | 3.450904 | AGATTACCTGTAGCCAAGTGGA | 58.549 | 45.455 | 0.18 | 0.00 | 37.39 | 4.02 |
138 | 139 | 3.914426 | AGATTACCTGTAGCCAAGTGG | 57.086 | 47.619 | 0.00 | 0.00 | 38.53 | 4.00 |
139 | 140 | 4.393062 | CACAAGATTACCTGTAGCCAAGTG | 59.607 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
140 | 141 | 4.565652 | CCACAAGATTACCTGTAGCCAAGT | 60.566 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
141 | 142 | 3.941483 | CCACAAGATTACCTGTAGCCAAG | 59.059 | 47.826 | 0.00 | 0.00 | 0.00 | 3.61 |
142 | 143 | 3.585289 | TCCACAAGATTACCTGTAGCCAA | 59.415 | 43.478 | 0.00 | 0.00 | 0.00 | 4.52 |
143 | 144 | 3.178046 | TCCACAAGATTACCTGTAGCCA | 58.822 | 45.455 | 0.00 | 0.00 | 0.00 | 4.75 |
144 | 145 | 3.906720 | TCCACAAGATTACCTGTAGCC | 57.093 | 47.619 | 0.00 | 0.00 | 0.00 | 3.93 |
145 | 146 | 6.151144 | ACAAAATCCACAAGATTACCTGTAGC | 59.849 | 38.462 | 0.00 | 0.00 | 44.75 | 3.58 |
146 | 147 | 7.687941 | ACAAAATCCACAAGATTACCTGTAG | 57.312 | 36.000 | 0.00 | 0.00 | 44.75 | 2.74 |
147 | 148 | 9.173021 | CATACAAAATCCACAAGATTACCTGTA | 57.827 | 33.333 | 0.00 | 0.00 | 44.75 | 2.74 |
148 | 149 | 7.888021 | TCATACAAAATCCACAAGATTACCTGT | 59.112 | 33.333 | 0.00 | 0.00 | 44.75 | 4.00 |
149 | 150 | 8.184192 | GTCATACAAAATCCACAAGATTACCTG | 58.816 | 37.037 | 0.00 | 0.00 | 44.75 | 4.00 |
150 | 151 | 7.888021 | TGTCATACAAAATCCACAAGATTACCT | 59.112 | 33.333 | 0.00 | 0.00 | 44.75 | 3.08 |
151 | 152 | 8.050778 | TGTCATACAAAATCCACAAGATTACC | 57.949 | 34.615 | 0.00 | 0.00 | 44.75 | 2.85 |
152 | 153 | 8.946085 | TCTGTCATACAAAATCCACAAGATTAC | 58.054 | 33.333 | 0.00 | 0.00 | 44.75 | 1.89 |
153 | 154 | 9.513906 | TTCTGTCATACAAAATCCACAAGATTA | 57.486 | 29.630 | 0.00 | 0.00 | 44.75 | 1.75 |
155 | 156 | 8.585471 | ATTCTGTCATACAAAATCCACAAGAT | 57.415 | 30.769 | 0.00 | 0.00 | 36.48 | 2.40 |
156 | 157 | 8.298854 | CAATTCTGTCATACAAAATCCACAAGA | 58.701 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
157 | 158 | 7.062605 | GCAATTCTGTCATACAAAATCCACAAG | 59.937 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
158 | 159 | 6.867816 | GCAATTCTGTCATACAAAATCCACAA | 59.132 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
159 | 160 | 6.389091 | GCAATTCTGTCATACAAAATCCACA | 58.611 | 36.000 | 0.00 | 0.00 | 0.00 | 4.17 |
160 | 161 | 5.807011 | GGCAATTCTGTCATACAAAATCCAC | 59.193 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
161 | 162 | 5.479724 | TGGCAATTCTGTCATACAAAATCCA | 59.520 | 36.000 | 0.00 | 0.00 | 30.26 | 3.41 |
162 | 163 | 5.964758 | TGGCAATTCTGTCATACAAAATCC | 58.035 | 37.500 | 0.00 | 0.00 | 30.26 | 3.01 |
163 | 164 | 6.855836 | TCTGGCAATTCTGTCATACAAAATC | 58.144 | 36.000 | 0.00 | 0.00 | 36.34 | 2.17 |
164 | 165 | 6.626623 | GCTCTGGCAATTCTGTCATACAAAAT | 60.627 | 38.462 | 0.00 | 0.00 | 36.34 | 1.82 |
165 | 166 | 5.335897 | GCTCTGGCAATTCTGTCATACAAAA | 60.336 | 40.000 | 0.00 | 0.00 | 36.34 | 2.44 |
166 | 167 | 4.156556 | GCTCTGGCAATTCTGTCATACAAA | 59.843 | 41.667 | 0.00 | 0.00 | 36.34 | 2.83 |
167 | 168 | 3.691118 | GCTCTGGCAATTCTGTCATACAA | 59.309 | 43.478 | 0.00 | 0.00 | 36.34 | 2.41 |
168 | 169 | 3.273434 | GCTCTGGCAATTCTGTCATACA | 58.727 | 45.455 | 0.00 | 0.00 | 36.34 | 2.29 |
169 | 170 | 3.273434 | TGCTCTGGCAATTCTGTCATAC | 58.727 | 45.455 | 0.00 | 0.00 | 46.36 | 2.39 |
170 | 171 | 3.632643 | TGCTCTGGCAATTCTGTCATA | 57.367 | 42.857 | 0.00 | 0.00 | 46.36 | 2.15 |
171 | 172 | 2.502142 | TGCTCTGGCAATTCTGTCAT | 57.498 | 45.000 | 0.00 | 0.00 | 46.36 | 3.06 |
182 | 183 | 1.000396 | AACTCCCCAATGCTCTGGC | 60.000 | 57.895 | 0.00 | 0.00 | 34.88 | 4.85 |
183 | 184 | 0.329261 | TGAACTCCCCAATGCTCTGG | 59.671 | 55.000 | 0.00 | 0.00 | 36.10 | 3.86 |
184 | 185 | 2.431954 | ATGAACTCCCCAATGCTCTG | 57.568 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
185 | 186 | 4.803329 | AATATGAACTCCCCAATGCTCT | 57.197 | 40.909 | 0.00 | 0.00 | 0.00 | 4.09 |
186 | 187 | 5.859205 | AAAATATGAACTCCCCAATGCTC | 57.141 | 39.130 | 0.00 | 0.00 | 0.00 | 4.26 |
187 | 188 | 8.227507 | AGTATAAAATATGAACTCCCCAATGCT | 58.772 | 33.333 | 0.00 | 0.00 | 0.00 | 3.79 |
188 | 189 | 8.409358 | AGTATAAAATATGAACTCCCCAATGC | 57.591 | 34.615 | 0.00 | 0.00 | 0.00 | 3.56 |
189 | 190 | 9.014297 | GGAGTATAAAATATGAACTCCCCAATG | 57.986 | 37.037 | 8.34 | 0.00 | 46.95 | 2.82 |
198 | 199 | 9.274206 | GGAACAGAGGGAGTATAAAATATGAAC | 57.726 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
199 | 200 | 9.225682 | AGGAACAGAGGGAGTATAAAATATGAA | 57.774 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
200 | 201 | 8.798975 | AGGAACAGAGGGAGTATAAAATATGA | 57.201 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
204 | 205 | 9.853177 | CATTTAGGAACAGAGGGAGTATAAAAT | 57.147 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
205 | 206 | 8.832735 | ACATTTAGGAACAGAGGGAGTATAAAA | 58.167 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
206 | 207 | 8.388656 | ACATTTAGGAACAGAGGGAGTATAAA | 57.611 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
207 | 208 | 7.989947 | ACATTTAGGAACAGAGGGAGTATAA | 57.010 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
208 | 209 | 9.144298 | CTTACATTTAGGAACAGAGGGAGTATA | 57.856 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
209 | 210 | 7.624077 | ACTTACATTTAGGAACAGAGGGAGTAT | 59.376 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
210 | 211 | 6.958192 | ACTTACATTTAGGAACAGAGGGAGTA | 59.042 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
211 | 212 | 5.785940 | ACTTACATTTAGGAACAGAGGGAGT | 59.214 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
212 | 213 | 6.155393 | AGACTTACATTTAGGAACAGAGGGAG | 59.845 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
213 | 214 | 6.023603 | AGACTTACATTTAGGAACAGAGGGA | 58.976 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
214 | 215 | 6.301169 | AGACTTACATTTAGGAACAGAGGG | 57.699 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
215 | 216 | 8.622948 | AAAAGACTTACATTTAGGAACAGAGG | 57.377 | 34.615 | 0.00 | 0.00 | 0.00 | 3.69 |
229 | 230 | 9.924650 | GTAGTGGAATCTCTAAAAAGACTTACA | 57.075 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
230 | 231 | 9.924650 | TGTAGTGGAATCTCTAAAAAGACTTAC | 57.075 | 33.333 | 0.00 | 0.00 | 0.00 | 2.34 |
232 | 233 | 9.847224 | TTTGTAGTGGAATCTCTAAAAAGACTT | 57.153 | 29.630 | 0.00 | 0.00 | 28.58 | 3.01 |
233 | 234 | 9.274206 | GTTTGTAGTGGAATCTCTAAAAAGACT | 57.726 | 33.333 | 3.22 | 0.00 | 30.99 | 3.24 |
234 | 235 | 9.274206 | AGTTTGTAGTGGAATCTCTAAAAAGAC | 57.726 | 33.333 | 3.22 | 0.00 | 30.99 | 3.01 |
241 | 242 | 8.618677 | CGTATGTAGTTTGTAGTGGAATCTCTA | 58.381 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
242 | 243 | 7.416438 | CCGTATGTAGTTTGTAGTGGAATCTCT | 60.416 | 40.741 | 0.00 | 0.00 | 0.00 | 3.10 |
243 | 244 | 6.696148 | CCGTATGTAGTTTGTAGTGGAATCTC | 59.304 | 42.308 | 0.00 | 0.00 | 0.00 | 2.75 |
244 | 245 | 6.379133 | TCCGTATGTAGTTTGTAGTGGAATCT | 59.621 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
245 | 246 | 6.567050 | TCCGTATGTAGTTTGTAGTGGAATC | 58.433 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
246 | 247 | 6.534475 | TCCGTATGTAGTTTGTAGTGGAAT | 57.466 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
247 | 248 | 5.981088 | TCCGTATGTAGTTTGTAGTGGAA | 57.019 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
248 | 249 | 5.419788 | ACATCCGTATGTAGTTTGTAGTGGA | 59.580 | 40.000 | 0.00 | 0.00 | 44.66 | 4.02 |
249 | 250 | 5.657474 | ACATCCGTATGTAGTTTGTAGTGG | 58.343 | 41.667 | 0.00 | 0.00 | 44.66 | 4.00 |
276 | 277 | 9.731819 | GTGAATCTACACTCGAAAATATGTCTA | 57.268 | 33.333 | 0.00 | 0.00 | 37.73 | 2.59 |
277 | 278 | 8.470805 | AGTGAATCTACACTCGAAAATATGTCT | 58.529 | 33.333 | 0.00 | 0.00 | 46.36 | 3.41 |
278 | 279 | 8.635877 | AGTGAATCTACACTCGAAAATATGTC | 57.364 | 34.615 | 0.00 | 0.00 | 46.36 | 3.06 |
291 | 292 | 5.412594 | TGGAGCAAAATGAGTGAATCTACAC | 59.587 | 40.000 | 0.00 | 0.00 | 40.60 | 2.90 |
292 | 293 | 5.559770 | TGGAGCAAAATGAGTGAATCTACA | 58.440 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
293 | 294 | 6.690194 | ATGGAGCAAAATGAGTGAATCTAC | 57.310 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
294 | 295 | 7.994911 | ACATATGGAGCAAAATGAGTGAATCTA | 59.005 | 33.333 | 7.80 | 0.00 | 0.00 | 1.98 |
295 | 296 | 6.832384 | ACATATGGAGCAAAATGAGTGAATCT | 59.168 | 34.615 | 7.80 | 0.00 | 0.00 | 2.40 |
296 | 297 | 7.035840 | ACATATGGAGCAAAATGAGTGAATC | 57.964 | 36.000 | 7.80 | 0.00 | 0.00 | 2.52 |
297 | 298 | 7.776969 | ACTACATATGGAGCAAAATGAGTGAAT | 59.223 | 33.333 | 15.30 | 0.00 | 0.00 | 2.57 |
298 | 299 | 7.112122 | ACTACATATGGAGCAAAATGAGTGAA | 58.888 | 34.615 | 15.30 | 0.00 | 0.00 | 3.18 |
299 | 300 | 6.653020 | ACTACATATGGAGCAAAATGAGTGA | 58.347 | 36.000 | 15.30 | 0.00 | 0.00 | 3.41 |
300 | 301 | 6.017605 | GGACTACATATGGAGCAAAATGAGTG | 60.018 | 42.308 | 15.30 | 0.00 | 0.00 | 3.51 |
301 | 302 | 6.058183 | GGACTACATATGGAGCAAAATGAGT | 58.942 | 40.000 | 15.30 | 0.00 | 0.00 | 3.41 |
302 | 303 | 6.057533 | TGGACTACATATGGAGCAAAATGAG | 58.942 | 40.000 | 15.30 | 0.00 | 0.00 | 2.90 |
303 | 304 | 6.000246 | TGGACTACATATGGAGCAAAATGA | 58.000 | 37.500 | 15.30 | 0.00 | 0.00 | 2.57 |
304 | 305 | 6.889301 | ATGGACTACATATGGAGCAAAATG | 57.111 | 37.500 | 15.30 | 0.00 | 38.26 | 2.32 |
305 | 306 | 7.749666 | ACTATGGACTACATATGGAGCAAAAT | 58.250 | 34.615 | 15.30 | 6.56 | 41.07 | 1.82 |
306 | 307 | 7.136822 | ACTATGGACTACATATGGAGCAAAA | 57.863 | 36.000 | 15.30 | 0.00 | 41.07 | 2.44 |
307 | 308 | 6.747414 | ACTATGGACTACATATGGAGCAAA | 57.253 | 37.500 | 15.30 | 0.66 | 41.07 | 3.68 |
308 | 309 | 7.238710 | TCTACTATGGACTACATATGGAGCAA | 58.761 | 38.462 | 15.30 | 1.98 | 41.07 | 3.91 |
309 | 310 | 6.790319 | TCTACTATGGACTACATATGGAGCA | 58.210 | 40.000 | 15.30 | 6.30 | 41.07 | 4.26 |
310 | 311 | 7.704578 | TTCTACTATGGACTACATATGGAGC | 57.295 | 40.000 | 15.30 | 7.75 | 41.07 | 4.70 |
311 | 312 | 9.693739 | AGATTCTACTATGGACTACATATGGAG | 57.306 | 37.037 | 13.77 | 13.77 | 41.07 | 3.86 |
312 | 313 | 9.688091 | GAGATTCTACTATGGACTACATATGGA | 57.312 | 37.037 | 7.80 | 0.00 | 41.07 | 3.41 |
313 | 314 | 9.693739 | AGAGATTCTACTATGGACTACATATGG | 57.306 | 37.037 | 7.80 | 0.00 | 41.07 | 2.74 |
341 | 342 | 8.957466 | CCCTCGATTCCTAAATTTAAGTCTTTT | 58.043 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
342 | 343 | 8.326529 | TCCCTCGATTCCTAAATTTAAGTCTTT | 58.673 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
343 | 344 | 7.858498 | TCCCTCGATTCCTAAATTTAAGTCTT | 58.142 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
344 | 345 | 7.125963 | ACTCCCTCGATTCCTAAATTTAAGTCT | 59.874 | 37.037 | 0.00 | 0.00 | 0.00 | 3.24 |
345 | 346 | 7.273712 | ACTCCCTCGATTCCTAAATTTAAGTC | 58.726 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
346 | 347 | 7.196637 | ACTCCCTCGATTCCTAAATTTAAGT | 57.803 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
353 | 354 | 9.763837 | TCATTATATACTCCCTCGATTCCTAAA | 57.236 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
354 | 355 | 9.763837 | TTCATTATATACTCCCTCGATTCCTAA | 57.236 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
355 | 356 | 9.763837 | TTTCATTATATACTCCCTCGATTCCTA | 57.236 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
356 | 357 | 8.666129 | TTTCATTATATACTCCCTCGATTCCT | 57.334 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
357 | 358 | 9.720769 | TTTTTCATTATATACTCCCTCGATTCC | 57.279 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
366 | 367 | 9.827411 | GCGGATTTCTTTTTCATTATATACTCC | 57.173 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
369 | 370 | 9.612620 | CCTGCGGATTTCTTTTTCATTATATAC | 57.387 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
370 | 371 | 8.296713 | GCCTGCGGATTTCTTTTTCATTATATA | 58.703 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
371 | 372 | 7.014615 | AGCCTGCGGATTTCTTTTTCATTATAT | 59.985 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
372 | 373 | 6.321181 | AGCCTGCGGATTTCTTTTTCATTATA | 59.679 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
373 | 374 | 5.127682 | AGCCTGCGGATTTCTTTTTCATTAT | 59.872 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
559 | 585 | 0.521291 | TATCACAGCGCTTTTGGCAC | 59.479 | 50.000 | 7.50 | 0.00 | 41.91 | 5.01 |
569 | 595 | 6.589139 | ACATACATCATGAGATTATCACAGCG | 59.411 | 38.462 | 0.09 | 0.00 | 41.91 | 5.18 |
599 | 658 | 4.263209 | CGACTGACATGAACGAGTAATGTC | 59.737 | 45.833 | 17.82 | 17.82 | 46.73 | 3.06 |
600 | 659 | 4.166523 | CGACTGACATGAACGAGTAATGT | 58.833 | 43.478 | 0.00 | 4.72 | 37.24 | 2.71 |
632 | 692 | 5.414765 | TGACACGATAGATCACACTAGTTGT | 59.585 | 40.000 | 0.00 | 0.00 | 38.55 | 3.32 |
657 | 717 | 4.373527 | GCCCCAAAATGTAAGACGTTTTT | 58.626 | 39.130 | 6.77 | 0.00 | 42.72 | 1.94 |
662 | 722 | 0.450184 | CGGCCCCAAAATGTAAGACG | 59.550 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
665 | 725 | 1.102978 | CCTCGGCCCCAAAATGTAAG | 58.897 | 55.000 | 0.00 | 0.00 | 0.00 | 2.34 |
666 | 726 | 0.323908 | CCCTCGGCCCCAAAATGTAA | 60.324 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
669 | 729 | 1.754234 | CTCCCTCGGCCCCAAAATG | 60.754 | 63.158 | 0.00 | 0.00 | 0.00 | 2.32 |
672 | 732 | 1.307517 | ATACTCCCTCGGCCCCAAA | 60.308 | 57.895 | 0.00 | 0.00 | 0.00 | 3.28 |
674 | 734 | 2.122989 | GATACTCCCTCGGCCCCA | 60.123 | 66.667 | 0.00 | 0.00 | 0.00 | 4.96 |
675 | 735 | 3.303928 | CGATACTCCCTCGGCCCC | 61.304 | 72.222 | 0.00 | 0.00 | 32.58 | 5.80 |
680 | 740 | 2.954318 | TCTTTTACCCGATACTCCCTCG | 59.046 | 50.000 | 0.00 | 0.00 | 35.92 | 4.63 |
681 | 741 | 5.349061 | TTTCTTTTACCCGATACTCCCTC | 57.651 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
682 | 742 | 5.250082 | AGTTTTCTTTTACCCGATACTCCCT | 59.750 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
683 | 743 | 5.494724 | AGTTTTCTTTTACCCGATACTCCC | 58.505 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
684 | 744 | 7.326454 | ACTAGTTTTCTTTTACCCGATACTCC | 58.674 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
685 | 745 | 9.513727 | CTACTAGTTTTCTTTTACCCGATACTC | 57.486 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
687 | 747 | 9.080915 | CACTACTAGTTTTCTTTTACCCGATAC | 57.919 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
690 | 750 | 6.925165 | CACACTACTAGTTTTCTTTTACCCGA | 59.075 | 38.462 | 0.00 | 0.00 | 0.00 | 5.14 |
691 | 751 | 6.925165 | TCACACTACTAGTTTTCTTTTACCCG | 59.075 | 38.462 | 0.00 | 0.00 | 0.00 | 5.28 |
692 | 752 | 8.843885 | ATCACACTACTAGTTTTCTTTTACCC | 57.156 | 34.615 | 0.00 | 0.00 | 0.00 | 3.69 |
718 | 825 | 8.827177 | TCGCGAAAAATTACAAGGATAGATAT | 57.173 | 30.769 | 6.20 | 0.00 | 0.00 | 1.63 |
771 | 1146 | 2.066262 | CCGGACGCGCATTATTATTCT | 58.934 | 47.619 | 5.73 | 0.00 | 0.00 | 2.40 |
774 | 1149 | 1.296056 | GGCCGGACGCGCATTATTAT | 61.296 | 55.000 | 5.05 | 0.00 | 38.94 | 1.28 |
822 | 1219 | 1.082886 | GACGGACGGACGATCGATC | 60.083 | 63.158 | 24.34 | 15.68 | 37.61 | 3.69 |
823 | 1220 | 2.541120 | GGACGGACGGACGATCGAT | 61.541 | 63.158 | 24.34 | 5.96 | 37.61 | 3.59 |
826 | 1223 | 3.446175 | GACGGACGGACGGACGATC | 62.446 | 68.421 | 15.02 | 7.04 | 38.39 | 3.69 |
827 | 1224 | 3.503363 | GACGGACGGACGGACGAT | 61.503 | 66.667 | 15.02 | 2.50 | 38.39 | 3.73 |
901 | 1350 | 4.200283 | CCGCGAGAGACCTGGCTC | 62.200 | 72.222 | 8.23 | 9.30 | 41.27 | 4.70 |
967 | 1416 | 0.389948 | CTCTGTTACCTCGGTGTGCC | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
968 | 1417 | 0.389948 | CCTCTGTTACCTCGGTGTGC | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 4.57 |
969 | 1418 | 0.246635 | CCCTCTGTTACCTCGGTGTG | 59.753 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
970 | 1419 | 0.113776 | TCCCTCTGTTACCTCGGTGT | 59.886 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
971 | 1420 | 0.818296 | CTCCCTCTGTTACCTCGGTG | 59.182 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 |
972 | 1421 | 0.324460 | CCTCCCTCTGTTACCTCGGT | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 4.69 |
973 | 1422 | 1.043673 | CCCTCCCTCTGTTACCTCGG | 61.044 | 65.000 | 0.00 | 0.00 | 0.00 | 4.63 |
974 | 1423 | 0.033405 | TCCCTCCCTCTGTTACCTCG | 60.033 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
979 | 1428 | 2.000803 | TGTCTCTCCCTCCCTCTGTTA | 58.999 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 |
988 | 1437 | 2.166907 | TCCCTCATTGTCTCTCCCTC | 57.833 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
990 | 1439 | 2.368221 | CAGATCCCTCATTGTCTCTCCC | 59.632 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
999 | 1448 | 2.885388 | ACTCCTCCAGATCCCTCATT | 57.115 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1292 | 1741 | 4.322385 | GTTGGTTCGTGGCGGCAC | 62.322 | 66.667 | 30.53 | 30.53 | 0.00 | 5.01 |
1298 | 1747 | 3.708734 | GACGGCGTTGGTTCGTGG | 61.709 | 66.667 | 16.19 | 0.00 | 37.25 | 4.94 |
1299 | 1748 | 2.962786 | TGACGGCGTTGGTTCGTG | 60.963 | 61.111 | 16.19 | 0.00 | 37.25 | 4.35 |
1300 | 1749 | 2.963320 | GTGACGGCGTTGGTTCGT | 60.963 | 61.111 | 16.19 | 0.00 | 39.99 | 3.85 |
1301 | 1750 | 4.054455 | CGTGACGGCGTTGGTTCG | 62.054 | 66.667 | 16.19 | 11.05 | 0.00 | 3.95 |
1302 | 1751 | 2.963320 | ACGTGACGGCGTTGGTTC | 60.963 | 61.111 | 16.19 | 0.32 | 43.04 | 3.62 |
1329 | 1778 | 2.977456 | TCAAAGCGCACGCCATGT | 60.977 | 55.556 | 11.47 | 0.00 | 43.17 | 3.21 |
1349 | 1798 | 4.724126 | ATGAACACTCAAGATGGCGAAGC | 61.724 | 47.826 | 0.00 | 0.00 | 45.12 | 3.86 |
1351 | 1800 | 2.542020 | TGAACACTCAAGATGGCGAA | 57.458 | 45.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1357 | 1806 | 8.627208 | ACAGAAACATTATGAACACTCAAGAT | 57.373 | 30.769 | 0.00 | 0.00 | 34.49 | 2.40 |
1358 | 1807 | 8.450578 | AACAGAAACATTATGAACACTCAAGA | 57.549 | 30.769 | 0.00 | 0.00 | 34.49 | 3.02 |
1360 | 1809 | 9.515020 | GAAAACAGAAACATTATGAACACTCAA | 57.485 | 29.630 | 0.00 | 0.00 | 34.49 | 3.02 |
1361 | 1810 | 8.902806 | AGAAAACAGAAACATTATGAACACTCA | 58.097 | 29.630 | 0.00 | 0.00 | 35.56 | 3.41 |
1362 | 1811 | 9.387123 | GAGAAAACAGAAACATTATGAACACTC | 57.613 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
1363 | 1812 | 8.902806 | TGAGAAAACAGAAACATTATGAACACT | 58.097 | 29.630 | 0.00 | 0.00 | 0.00 | 3.55 |
1364 | 1813 | 9.683069 | ATGAGAAAACAGAAACATTATGAACAC | 57.317 | 29.630 | 0.00 | 0.00 | 0.00 | 3.32 |
1391 | 1840 | 8.349245 | GGGAAGAAAAGAAGAAGAAGAAAAGAG | 58.651 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
1392 | 1841 | 7.285629 | GGGGAAGAAAAGAAGAAGAAGAAAAGA | 59.714 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
1393 | 1842 | 7.068716 | TGGGGAAGAAAAGAAGAAGAAGAAAAG | 59.931 | 37.037 | 0.00 | 0.00 | 0.00 | 2.27 |
1395 | 1844 | 6.431722 | TGGGGAAGAAAAGAAGAAGAAGAAA | 58.568 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1396 | 1845 | 6.013554 | TGGGGAAGAAAAGAAGAAGAAGAA | 57.986 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
1397 | 1846 | 5.646692 | TGGGGAAGAAAAGAAGAAGAAGA | 57.353 | 39.130 | 0.00 | 0.00 | 0.00 | 2.87 |
1398 | 1847 | 5.123027 | CGATGGGGAAGAAAAGAAGAAGAAG | 59.877 | 44.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1399 | 1848 | 5.003804 | CGATGGGGAAGAAAAGAAGAAGAA | 58.996 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
1400 | 1849 | 4.041691 | ACGATGGGGAAGAAAAGAAGAAGA | 59.958 | 41.667 | 0.00 | 0.00 | 0.00 | 2.87 |
1401 | 1850 | 4.327680 | ACGATGGGGAAGAAAAGAAGAAG | 58.672 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
1402 | 1851 | 4.367039 | ACGATGGGGAAGAAAAGAAGAA | 57.633 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
1403 | 1852 | 4.324267 | GAACGATGGGGAAGAAAAGAAGA | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
1404 | 1853 | 3.440522 | GGAACGATGGGGAAGAAAAGAAG | 59.559 | 47.826 | 0.00 | 0.00 | 0.00 | 2.85 |
1405 | 1854 | 3.073946 | AGGAACGATGGGGAAGAAAAGAA | 59.926 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
1406 | 1855 | 2.642807 | AGGAACGATGGGGAAGAAAAGA | 59.357 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
1407 | 1856 | 3.073274 | AGGAACGATGGGGAAGAAAAG | 57.927 | 47.619 | 0.00 | 0.00 | 0.00 | 2.27 |
1408 | 1857 | 3.518992 | AAGGAACGATGGGGAAGAAAA | 57.481 | 42.857 | 0.00 | 0.00 | 0.00 | 2.29 |
1409 | 1858 | 4.855298 | ATAAGGAACGATGGGGAAGAAA | 57.145 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
1410 | 1859 | 4.226394 | TGAATAAGGAACGATGGGGAAGAA | 59.774 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
1411 | 1860 | 3.778075 | TGAATAAGGAACGATGGGGAAGA | 59.222 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
1412 | 1861 | 4.150897 | TGAATAAGGAACGATGGGGAAG | 57.849 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
1413 | 1862 | 4.788925 | ATGAATAAGGAACGATGGGGAA | 57.211 | 40.909 | 0.00 | 0.00 | 0.00 | 3.97 |
1438 | 1887 | 6.223351 | TGATTGCATTGCATCCATAAGAAA | 57.777 | 33.333 | 12.95 | 0.00 | 38.76 | 2.52 |
1456 | 1905 | 2.729360 | CTGTGTGTTGCTTGCATGATTG | 59.271 | 45.455 | 3.33 | 0.00 | 0.00 | 2.67 |
1459 | 1908 | 1.677942 | TCTGTGTGTTGCTTGCATGA | 58.322 | 45.000 | 3.33 | 0.00 | 0.00 | 3.07 |
1460 | 1909 | 2.495409 | TTCTGTGTGTTGCTTGCATG | 57.505 | 45.000 | 0.00 | 0.00 | 0.00 | 4.06 |
1462 | 1911 | 2.491298 | TCTTTTCTGTGTGTTGCTTGCA | 59.509 | 40.909 | 0.00 | 0.00 | 0.00 | 4.08 |
1464 | 1913 | 5.163963 | GGTTTTCTTTTCTGTGTGTTGCTTG | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 4.01 |
1466 | 1915 | 4.494484 | GGTTTTCTTTTCTGTGTGTTGCT | 58.506 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
1467 | 1916 | 3.303229 | CGGTTTTCTTTTCTGTGTGTTGC | 59.697 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
1468 | 1917 | 4.481463 | ACGGTTTTCTTTTCTGTGTGTTG | 58.519 | 39.130 | 0.00 | 0.00 | 0.00 | 3.33 |
1469 | 1918 | 4.776795 | ACGGTTTTCTTTTCTGTGTGTT | 57.223 | 36.364 | 0.00 | 0.00 | 0.00 | 3.32 |
1470 | 1919 | 4.380128 | GGAACGGTTTTCTTTTCTGTGTGT | 60.380 | 41.667 | 0.00 | 0.00 | 0.00 | 3.72 |
1471 | 1920 | 4.102649 | GGAACGGTTTTCTTTTCTGTGTG | 58.897 | 43.478 | 0.00 | 0.00 | 0.00 | 3.82 |
1472 | 1921 | 3.759618 | TGGAACGGTTTTCTTTTCTGTGT | 59.240 | 39.130 | 0.00 | 0.00 | 0.00 | 3.72 |
1473 | 1922 | 4.364415 | TGGAACGGTTTTCTTTTCTGTG | 57.636 | 40.909 | 0.00 | 0.00 | 0.00 | 3.66 |
1474 | 1923 | 5.592104 | ATTGGAACGGTTTTCTTTTCTGT | 57.408 | 34.783 | 0.00 | 0.00 | 0.00 | 3.41 |
1475 | 1924 | 6.419710 | GGTTATTGGAACGGTTTTCTTTTCTG | 59.580 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
1476 | 1925 | 6.461927 | GGGTTATTGGAACGGTTTTCTTTTCT | 60.462 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
1477 | 1926 | 5.693104 | GGGTTATTGGAACGGTTTTCTTTTC | 59.307 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
1478 | 1927 | 5.603596 | GGGTTATTGGAACGGTTTTCTTTT | 58.396 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
1479 | 1928 | 4.261698 | CGGGTTATTGGAACGGTTTTCTTT | 60.262 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
1480 | 1929 | 3.253921 | CGGGTTATTGGAACGGTTTTCTT | 59.746 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
1481 | 1930 | 2.815503 | CGGGTTATTGGAACGGTTTTCT | 59.184 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
1482 | 1931 | 2.095110 | CCGGGTTATTGGAACGGTTTTC | 60.095 | 50.000 | 0.00 | 0.00 | 39.70 | 2.29 |
1483 | 1932 | 1.887854 | CCGGGTTATTGGAACGGTTTT | 59.112 | 47.619 | 0.00 | 0.00 | 39.70 | 2.43 |
1537 | 1986 | 8.914654 | CGCAACTCATCAATCAAAAGATAAAAA | 58.085 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
1540 | 1989 | 7.022979 | CACGCAACTCATCAATCAAAAGATAA | 58.977 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
1542 | 1991 | 5.396484 | CACGCAACTCATCAATCAAAAGAT | 58.604 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
1544 | 1993 | 3.916172 | CCACGCAACTCATCAATCAAAAG | 59.084 | 43.478 | 0.00 | 0.00 | 0.00 | 2.27 |
1546 | 1995 | 2.351641 | GCCACGCAACTCATCAATCAAA | 60.352 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
1549 | 1998 | 0.804364 | TGCCACGCAACTCATCAATC | 59.196 | 50.000 | 0.00 | 0.00 | 34.76 | 2.67 |
1550 | 1999 | 1.246649 | TTGCCACGCAACTCATCAAT | 58.753 | 45.000 | 0.00 | 0.00 | 43.99 | 2.57 |
1551 | 2000 | 2.712984 | TTGCCACGCAACTCATCAA | 58.287 | 47.368 | 0.00 | 0.00 | 43.99 | 2.57 |
1552 | 2001 | 4.471761 | TTGCCACGCAACTCATCA | 57.528 | 50.000 | 0.00 | 0.00 | 43.99 | 3.07 |
1575 | 2024 | 0.800683 | CATGCATTGCCGCAGAGTTG | 60.801 | 55.000 | 6.12 | 0.00 | 46.99 | 3.16 |
1595 | 2044 | 2.949644 | ACTACAGACAGGTTTTTGTGGC | 59.050 | 45.455 | 0.00 | 0.00 | 0.00 | 5.01 |
1600 | 2049 | 3.821033 | GCATGGACTACAGACAGGTTTTT | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
1605 | 2054 | 0.807667 | GCGCATGGACTACAGACAGG | 60.808 | 60.000 | 0.30 | 0.00 | 0.00 | 4.00 |
1606 | 2055 | 0.174389 | AGCGCATGGACTACAGACAG | 59.826 | 55.000 | 11.47 | 0.00 | 0.00 | 3.51 |
1607 | 2056 | 0.608130 | AAGCGCATGGACTACAGACA | 59.392 | 50.000 | 11.47 | 0.00 | 0.00 | 3.41 |
1608 | 2057 | 1.002366 | CAAGCGCATGGACTACAGAC | 58.998 | 55.000 | 11.47 | 0.00 | 0.00 | 3.51 |
1631 | 2080 | 1.533753 | TTTGCCCTCCCAGCTTTGG | 60.534 | 57.895 | 0.00 | 0.00 | 0.00 | 3.28 |
1632 | 2081 | 0.829182 | ACTTTGCCCTCCCAGCTTTG | 60.829 | 55.000 | 0.00 | 0.00 | 0.00 | 2.77 |
1633 | 2082 | 0.105504 | AACTTTGCCCTCCCAGCTTT | 60.106 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1634 | 2083 | 0.105504 | AAACTTTGCCCTCCCAGCTT | 60.106 | 50.000 | 0.00 | 0.00 | 0.00 | 3.74 |
1650 | 2099 | 4.877282 | AGGCGCATCTAGATTCTAGAAAC | 58.123 | 43.478 | 23.62 | 17.63 | 0.00 | 2.78 |
1659 | 2108 | 2.612471 | GCAGAATGAGGCGCATCTAGAT | 60.612 | 50.000 | 23.78 | 5.52 | 39.69 | 1.98 |
1660 | 2109 | 1.269988 | GCAGAATGAGGCGCATCTAGA | 60.270 | 52.381 | 23.78 | 2.91 | 39.69 | 2.43 |
1661 | 2110 | 1.146637 | GCAGAATGAGGCGCATCTAG | 58.853 | 55.000 | 23.78 | 9.20 | 39.69 | 2.43 |
1662 | 2111 | 0.465287 | TGCAGAATGAGGCGCATCTA | 59.535 | 50.000 | 23.78 | 10.05 | 39.69 | 1.98 |
1663 | 2112 | 1.094073 | GTGCAGAATGAGGCGCATCT | 61.094 | 55.000 | 23.78 | 4.45 | 39.69 | 2.90 |
1664 | 2113 | 1.354506 | GTGCAGAATGAGGCGCATC | 59.645 | 57.895 | 16.46 | 16.46 | 39.69 | 3.91 |
1665 | 2114 | 1.377594 | TGTGCAGAATGAGGCGCAT | 60.378 | 52.632 | 10.83 | 0.00 | 44.73 | 4.73 |
1669 | 2118 | 2.482374 | GCGTGTGCAGAATGAGGC | 59.518 | 61.111 | 0.00 | 0.00 | 39.69 | 4.70 |
1684 | 2133 | 1.733402 | TTGGGGCTTGTTTCTGTGCG | 61.733 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1685 | 2134 | 0.681175 | ATTGGGGCTTGTTTCTGTGC | 59.319 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
1686 | 2135 | 1.688197 | ACATTGGGGCTTGTTTCTGTG | 59.312 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
1687 | 2136 | 1.963515 | GACATTGGGGCTTGTTTCTGT | 59.036 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1688 | 2137 | 2.229784 | GAGACATTGGGGCTTGTTTCTG | 59.770 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1693 | 2142 | 2.610438 | AATGAGACATTGGGGCTTGT | 57.390 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1700 | 2149 | 4.340381 | GGGGAGAATGAAATGAGACATTGG | 59.660 | 45.833 | 0.00 | 0.00 | 36.94 | 3.16 |
1739 | 2189 | 3.564644 | GCCTGTTCATCCATCTGAATGAG | 59.435 | 47.826 | 0.00 | 0.00 | 37.47 | 2.90 |
1828 | 2278 | 2.655090 | TCCTGAACATCACTTGGCAA | 57.345 | 45.000 | 0.00 | 0.00 | 0.00 | 4.52 |
1831 | 2281 | 3.877559 | TGCTATCCTGAACATCACTTGG | 58.122 | 45.455 | 0.00 | 0.00 | 0.00 | 3.61 |
1832 | 2282 | 4.696877 | TGTTGCTATCCTGAACATCACTTG | 59.303 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1886 | 2336 | 5.061933 | GGGAATAACGTTTCTCGAACTTCTC | 59.938 | 44.000 | 5.91 | 0.00 | 42.86 | 2.87 |
1949 | 2399 | 0.680061 | GGGGCCAAGTATCGGAGTAG | 59.320 | 60.000 | 4.39 | 0.00 | 0.00 | 2.57 |
2008 | 2461 | 1.336125 | GCTTAGCTGATGATGGGCAAC | 59.664 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
2027 | 2480 | 5.948992 | AACTTCTAATGGTTGAGAACTGC | 57.051 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
2030 | 2483 | 8.154649 | TCTCAAAACTTCTAATGGTTGAGAAC | 57.845 | 34.615 | 10.59 | 0.00 | 44.74 | 3.01 |
2051 | 2504 | 0.243907 | GAGCCTACACAAGCGTCTCA | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2052 | 2505 | 0.528470 | AGAGCCTACACAAGCGTCTC | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2053 | 2506 | 0.528470 | GAGAGCCTACACAAGCGTCT | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2054 | 2507 | 0.243907 | TGAGAGCCTACACAAGCGTC | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2055 | 2508 | 0.244994 | CTGAGAGCCTACACAAGCGT | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 5.07 |
2056 | 2509 | 0.528017 | TCTGAGAGCCTACACAAGCG | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
2057 | 2510 | 1.734047 | CGTCTGAGAGCCTACACAAGC | 60.734 | 57.143 | 0.00 | 0.00 | 0.00 | 4.01 |
2058 | 2511 | 1.542030 | ACGTCTGAGAGCCTACACAAG | 59.458 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
2062 | 2553 | 2.027469 | TCAGTACGTCTGAGAGCCTACA | 60.027 | 50.000 | 11.95 | 0.00 | 46.77 | 2.74 |
2076 | 2567 | 2.183555 | GCGAGGGGGTTCAGTACG | 59.816 | 66.667 | 0.00 | 0.00 | 0.00 | 3.67 |
2152 | 2643 | 2.135139 | CTTGTAGTGAGCAAAGACGCA | 58.865 | 47.619 | 0.00 | 0.00 | 0.00 | 5.24 |
2164 | 2655 | 1.134788 | GTCGGGATGGTCCTTGTAGTG | 60.135 | 57.143 | 0.00 | 0.00 | 36.57 | 2.74 |
2212 | 2703 | 1.913403 | GTTGGCAAAATCGAAGATGCG | 59.087 | 47.619 | 0.00 | 0.00 | 45.12 | 4.73 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.