Multiple sequence alignment - TraesCS5B01G507700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G507700 chr5B 100.000 2584 0 0 1 2584 673037412 673034829 0.000000e+00 4772
1 TraesCS5B01G507700 chr5B 95.327 642 28 1 1 642 692448556 692449195 0.000000e+00 1018
2 TraesCS5B01G507700 chr5B 94.745 628 30 2 1 627 563585793 563586418 0.000000e+00 974
3 TraesCS5B01G507700 chr5B 84.238 571 64 17 1024 1582 672865702 672865146 1.360000e-147 532
4 TraesCS5B01G507700 chr5B 76.415 424 75 16 695 1107 672954105 672953696 3.370000e-49 206
5 TraesCS5B01G507700 chr4A 88.203 1263 90 28 666 1898 639040914 639042147 0.000000e+00 1452
6 TraesCS5B01G507700 chr4A 88.203 1263 90 28 666 1898 639042791 639044024 0.000000e+00 1452
7 TraesCS5B01G507700 chr4A 91.271 653 45 9 1 646 724796674 724797321 0.000000e+00 880
8 TraesCS5B01G507700 chr4A 84.874 714 75 19 964 1659 639055449 639056147 0.000000e+00 689
9 TraesCS5B01G507700 chr4A 87.601 371 37 7 1216 1586 639048445 639048806 3.070000e-114 422
10 TraesCS5B01G507700 chr4A 80.000 460 57 22 666 1104 639047995 639048440 8.980000e-80 307
11 TraesCS5B01G507700 chr5D 86.830 1268 118 30 666 1911 533006438 533005198 0.000000e+00 1371
12 TraesCS5B01G507700 chr5D 81.793 736 76 40 877 1582 532745354 532744647 4.830000e-157 564
13 TraesCS5B01G507700 chr5D 83.045 578 56 22 1024 1582 532819798 532819244 1.070000e-133 486
14 TraesCS5B01G507700 chr5D 87.871 371 36 7 1216 1586 533000591 533000230 6.610000e-116 427
15 TraesCS5B01G507700 chr5D 85.202 223 17 9 890 1107 533000804 533000593 5.600000e-52 215
16 TraesCS5B01G507700 chr7B 96.562 640 19 2 1 640 176221096 176220460 0.000000e+00 1057
17 TraesCS5B01G507700 chr7B 96.262 642 21 2 1 642 499250289 499250927 0.000000e+00 1050
18 TraesCS5B01G507700 chr6B 96.244 639 22 1 1 639 37769364 37770000 0.000000e+00 1046
19 TraesCS5B01G507700 chr6B 95.490 643 25 3 1 640 514830796 514831437 0.000000e+00 1024
20 TraesCS5B01G507700 chr2B 95.289 658 26 2 1 655 761705363 761706018 0.000000e+00 1038
21 TraesCS5B01G507700 chr2B 94.427 646 28 7 1 642 195535139 195534498 0.000000e+00 987
22 TraesCS5B01G507700 chr3B 94.852 641 29 3 1 640 813590264 813589627 0.000000e+00 998
23 TraesCS5B01G507700 chr1A 84.524 168 22 2 2048 2212 124348918 124349084 2.060000e-36 163


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G507700 chr5B 673034829 673037412 2583 True 4772.00 4772 100.00000 1 2584 1 chr5B.!!$R3 2583
1 TraesCS5B01G507700 chr5B 692448556 692449195 639 False 1018.00 1018 95.32700 1 642 1 chr5B.!!$F2 641
2 TraesCS5B01G507700 chr5B 563585793 563586418 625 False 974.00 974 94.74500 1 627 1 chr5B.!!$F1 626
3 TraesCS5B01G507700 chr5B 672865146 672865702 556 True 532.00 532 84.23800 1024 1582 1 chr5B.!!$R1 558
4 TraesCS5B01G507700 chr4A 639040914 639048806 7892 False 908.25 1452 86.00175 666 1898 4 chr4A.!!$F3 1232
5 TraesCS5B01G507700 chr4A 724796674 724797321 647 False 880.00 880 91.27100 1 646 1 chr4A.!!$F2 645
6 TraesCS5B01G507700 chr4A 639055449 639056147 698 False 689.00 689 84.87400 964 1659 1 chr4A.!!$F1 695
7 TraesCS5B01G507700 chr5D 533005198 533006438 1240 True 1371.00 1371 86.83000 666 1911 1 chr5D.!!$R3 1245
8 TraesCS5B01G507700 chr5D 532744647 532745354 707 True 564.00 564 81.79300 877 1582 1 chr5D.!!$R1 705
9 TraesCS5B01G507700 chr5D 532819244 532819798 554 True 486.00 486 83.04500 1024 1582 1 chr5D.!!$R2 558
10 TraesCS5B01G507700 chr5D 533000230 533000804 574 True 321.00 427 86.53650 890 1586 2 chr5D.!!$R4 696
11 TraesCS5B01G507700 chr7B 176220460 176221096 636 True 1057.00 1057 96.56200 1 640 1 chr7B.!!$R1 639
12 TraesCS5B01G507700 chr7B 499250289 499250927 638 False 1050.00 1050 96.26200 1 642 1 chr7B.!!$F1 641
13 TraesCS5B01G507700 chr6B 37769364 37770000 636 False 1046.00 1046 96.24400 1 639 1 chr6B.!!$F1 638
14 TraesCS5B01G507700 chr6B 514830796 514831437 641 False 1024.00 1024 95.49000 1 640 1 chr6B.!!$F2 639
15 TraesCS5B01G507700 chr2B 761705363 761706018 655 False 1038.00 1038 95.28900 1 655 1 chr2B.!!$F1 654
16 TraesCS5B01G507700 chr2B 195534498 195535139 641 True 987.00 987 94.42700 1 642 1 chr2B.!!$R1 641
17 TraesCS5B01G507700 chr3B 813589627 813590264 637 True 998.00 998 94.85200 1 640 1 chr3B.!!$R1 639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
600 615 0.250553 AGAGATCGCCTCCCTAGTCG 60.251 60.0 0.0 0.0 42.97 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2348 4351 0.036294 GAAGGGGTTTGAGGAGACCG 60.036 60.0 0.0 0.0 36.78 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
325 334 2.104111 CCATCCATGAACCCTAACGCTA 59.896 50.000 0.00 0.00 0.00 4.26
328 337 1.485066 CCATGAACCCTAACGCTACCT 59.515 52.381 0.00 0.00 0.00 3.08
347 356 4.213996 ACCTATCTGTGGGATTGGCAGAT 61.214 47.826 10.50 10.50 46.44 2.90
405 415 3.680786 CCGCCGGTGTGAGAGTGA 61.681 66.667 15.14 0.00 0.00 3.41
495 505 3.575256 TCCAAAACCTAACTACAGAGCGA 59.425 43.478 0.00 0.00 0.00 4.93
599 614 1.989706 AAGAGATCGCCTCCCTAGTC 58.010 55.000 0.00 0.00 42.97 2.59
600 615 0.250553 AGAGATCGCCTCCCTAGTCG 60.251 60.000 0.00 0.00 42.97 4.18
642 660 3.446516 GCTAGGGTAGGAAAAAGTCTCGA 59.553 47.826 0.00 0.00 0.00 4.04
643 661 4.440387 GCTAGGGTAGGAAAAAGTCTCGAG 60.440 50.000 5.93 5.93 0.00 4.04
655 673 2.577700 AGTCTCGAGCGATATGGACTT 58.422 47.619 7.81 0.00 31.14 3.01
656 674 2.952978 AGTCTCGAGCGATATGGACTTT 59.047 45.455 7.81 0.00 31.14 2.66
657 675 3.381908 AGTCTCGAGCGATATGGACTTTT 59.618 43.478 7.81 0.00 31.14 2.27
658 676 3.487574 GTCTCGAGCGATATGGACTTTTG 59.512 47.826 7.81 0.00 0.00 2.44
659 677 2.201732 TCGAGCGATATGGACTTTTGC 58.798 47.619 0.00 0.00 0.00 3.68
660 678 1.933181 CGAGCGATATGGACTTTTGCA 59.067 47.619 0.00 0.00 0.00 4.08
661 679 2.033407 CGAGCGATATGGACTTTTGCAG 60.033 50.000 0.00 0.00 0.00 4.41
662 680 1.672881 AGCGATATGGACTTTTGCAGC 59.327 47.619 0.00 0.00 0.00 5.25
663 681 1.595489 GCGATATGGACTTTTGCAGCG 60.595 52.381 0.00 0.00 0.00 5.18
664 682 1.595489 CGATATGGACTTTTGCAGCGC 60.595 52.381 0.00 0.00 0.00 5.92
725 743 4.694982 TCAACGACGTACACTCCTGTATAA 59.305 41.667 0.00 0.00 35.28 0.98
798 816 7.116075 TGAGGCTAATTTTCCTTGTGCTTATA 58.884 34.615 0.00 0.00 31.71 0.98
817 835 1.529226 AACCAATCAAACGCGGATGA 58.471 45.000 12.47 15.05 0.00 2.92
821 839 3.056891 ACCAATCAAACGCGGATGAATTT 60.057 39.130 17.99 7.98 0.00 1.82
822 840 3.304026 CCAATCAAACGCGGATGAATTTG 59.696 43.478 17.99 17.09 34.11 2.32
823 841 1.975837 TCAAACGCGGATGAATTTGC 58.024 45.000 12.47 0.00 33.09 3.68
829 847 1.975837 GCGGATGAATTTGCGAAACA 58.024 45.000 0.00 0.00 31.44 2.83
832 850 3.304257 CGGATGAATTTGCGAAACAACA 58.696 40.909 0.00 0.00 38.23 3.33
833 851 3.919804 CGGATGAATTTGCGAAACAACAT 59.080 39.130 0.00 0.00 38.23 2.71
834 852 4.385447 CGGATGAATTTGCGAAACAACATT 59.615 37.500 0.00 0.00 38.23 2.71
835 853 5.610975 GGATGAATTTGCGAAACAACATTG 58.389 37.500 0.00 0.00 38.23 2.82
836 854 5.389725 GGATGAATTTGCGAAACAACATTGG 60.390 40.000 0.00 0.00 38.23 3.16
838 856 5.295950 TGAATTTGCGAAACAACATTGGAT 58.704 33.333 0.00 0.00 38.23 3.41
839 857 5.177142 TGAATTTGCGAAACAACATTGGATG 59.823 36.000 0.00 0.00 38.23 3.51
840 858 3.998099 TTGCGAAACAACATTGGATGA 57.002 38.095 0.00 0.00 31.73 2.92
841 859 4.517952 TTGCGAAACAACATTGGATGAT 57.482 36.364 0.00 0.00 31.73 2.45
842 860 4.517952 TGCGAAACAACATTGGATGATT 57.482 36.364 0.00 0.00 0.00 2.57
843 861 5.635417 TGCGAAACAACATTGGATGATTA 57.365 34.783 0.00 0.00 0.00 1.75
844 862 5.398169 TGCGAAACAACATTGGATGATTAC 58.602 37.500 0.00 0.00 0.00 1.89
846 864 5.512788 GCGAAACAACATTGGATGATTACAG 59.487 40.000 0.00 0.00 0.00 2.74
847 865 6.029607 CGAAACAACATTGGATGATTACAGG 58.970 40.000 0.00 0.00 0.00 4.00
848 866 6.128035 CGAAACAACATTGGATGATTACAGGA 60.128 38.462 0.00 0.00 0.00 3.86
849 867 6.515272 AACAACATTGGATGATTACAGGAC 57.485 37.500 0.00 0.00 0.00 3.85
850 868 5.819991 ACAACATTGGATGATTACAGGACT 58.180 37.500 0.00 0.00 0.00 3.85
851 869 5.649395 ACAACATTGGATGATTACAGGACTG 59.351 40.000 0.00 0.00 0.00 3.51
852 870 5.441718 ACATTGGATGATTACAGGACTGT 57.558 39.130 10.15 10.15 46.87 3.55
853 871 5.188434 ACATTGGATGATTACAGGACTGTG 58.812 41.667 14.86 0.00 44.63 3.66
854 872 3.912496 TGGATGATTACAGGACTGTGG 57.088 47.619 14.86 0.00 44.63 4.17
855 873 3.181329 TGGATGATTACAGGACTGTGGT 58.819 45.455 14.86 3.45 44.63 4.16
857 875 4.161565 TGGATGATTACAGGACTGTGGTAC 59.838 45.833 14.86 4.93 44.63 3.34
858 876 4.443034 GGATGATTACAGGACTGTGGTACC 60.443 50.000 14.86 4.43 44.63 3.34
860 878 2.708037 TTACAGGACTGTGGTACCCT 57.292 50.000 14.86 0.00 44.63 4.34
861 879 2.708037 TACAGGACTGTGGTACCCTT 57.292 50.000 14.86 0.00 44.63 3.95
862 880 1.349067 ACAGGACTGTGGTACCCTTC 58.651 55.000 10.07 0.50 43.11 3.46
864 882 0.492276 AGGACTGTGGTACCCTTCCT 59.508 55.000 10.07 11.71 0.00 3.36
865 883 1.720533 AGGACTGTGGTACCCTTCCTA 59.279 52.381 10.07 0.00 31.47 2.94
869 887 0.416231 TGTGGTACCCTTCCTAGCCT 59.584 55.000 10.07 0.00 0.00 4.58
870 888 0.831307 GTGGTACCCTTCCTAGCCTG 59.169 60.000 10.07 0.00 0.00 4.85
950 994 5.299531 AGAACAACAGCTAGCTACATCGATA 59.700 40.000 18.86 0.00 0.00 2.92
1104 3035 3.047718 CTTCGACGACTGCGGCCTA 62.048 63.158 0.00 0.00 44.63 3.93
1141 3081 2.561209 TACCCTACCTCTCATGCCAA 57.439 50.000 0.00 0.00 0.00 4.52
1142 3082 1.898863 ACCCTACCTCTCATGCCAAT 58.101 50.000 0.00 0.00 0.00 3.16
1143 3083 2.208872 ACCCTACCTCTCATGCCAATT 58.791 47.619 0.00 0.00 0.00 2.32
1144 3084 2.582636 ACCCTACCTCTCATGCCAATTT 59.417 45.455 0.00 0.00 0.00 1.82
1427 3399 1.956170 CGACTGCTGCGTCCACTTT 60.956 57.895 15.34 0.00 0.00 2.66
1481 3453 3.706373 GAGCTCAAGGCCCGTGGA 61.706 66.667 9.40 0.00 43.05 4.02
1514 3486 2.116125 GGCTGGCACCTCAACCTT 59.884 61.111 0.00 0.00 0.00 3.50
1615 3599 0.248012 TGCCGTACGTGTGAATGGAT 59.752 50.000 15.21 0.00 0.00 3.41
1626 3610 4.240888 GTGTGAATGGATGATCGATCGAT 58.759 43.478 29.76 29.76 37.59 3.59
1659 3644 5.474578 TGGTGCTTGGTAAATTATTGCAA 57.525 34.783 0.00 0.00 0.00 4.08
1661 3646 5.698545 TGGTGCTTGGTAAATTATTGCAAAC 59.301 36.000 1.71 0.00 0.00 2.93
1727 3712 2.224426 TGCGGTGAAGGAGTATGTTGTT 60.224 45.455 0.00 0.00 0.00 2.83
1730 3715 4.562082 CGGTGAAGGAGTATGTTGTTGTA 58.438 43.478 0.00 0.00 0.00 2.41
1775 3770 4.168291 GGAGGAGGAGCAAGCGGG 62.168 72.222 0.00 0.00 0.00 6.13
1813 3808 7.009815 CCATGATGCATTTTGTTCATTGTACTC 59.990 37.037 0.00 0.00 0.00 2.59
1892 3895 2.543641 GGGATCACCGTACTTTTACCG 58.456 52.381 0.00 0.00 36.97 4.02
1897 3900 1.296068 CCGTACTTTTACCGGGCCA 59.704 57.895 6.32 0.00 0.00 5.36
1924 3927 8.826710 AAAAAGATTTTTACCAGCTTTGTTAGC 58.173 29.630 1.51 0.00 42.96 3.09
1940 3943 9.545611 GCTTTGTTAGCCAAAAATATCAAAATG 57.454 29.630 0.00 0.00 44.48 2.32
1941 3944 9.545611 CTTTGTTAGCCAAAAATATCAAAATGC 57.454 29.630 0.00 0.00 42.31 3.56
1942 3945 7.288317 TGTTAGCCAAAAATATCAAAATGCG 57.712 32.000 0.00 0.00 0.00 4.73
1943 3946 6.870965 TGTTAGCCAAAAATATCAAAATGCGT 59.129 30.769 0.00 0.00 0.00 5.24
1944 3947 8.029522 TGTTAGCCAAAAATATCAAAATGCGTA 58.970 29.630 0.00 0.00 0.00 4.42
1945 3948 9.030301 GTTAGCCAAAAATATCAAAATGCGTAT 57.970 29.630 0.00 0.00 0.00 3.06
1947 3950 8.801715 AGCCAAAAATATCAAAATGCGTATAG 57.198 30.769 0.00 0.00 0.00 1.31
1948 3951 8.413229 AGCCAAAAATATCAAAATGCGTATAGT 58.587 29.630 0.00 0.00 0.00 2.12
1949 3952 8.479280 GCCAAAAATATCAAAATGCGTATAGTG 58.521 33.333 0.00 0.00 0.00 2.74
1950 3953 8.479280 CCAAAAATATCAAAATGCGTATAGTGC 58.521 33.333 0.00 0.00 0.00 4.40
1951 3954 8.479280 CAAAAATATCAAAATGCGTATAGTGCC 58.521 33.333 0.00 0.00 0.00 5.01
1952 3955 7.510549 AAATATCAAAATGCGTATAGTGCCT 57.489 32.000 0.00 0.00 0.00 4.75
1953 3956 7.510549 AATATCAAAATGCGTATAGTGCCTT 57.489 32.000 0.00 0.00 0.00 4.35
1954 3957 5.835113 ATCAAAATGCGTATAGTGCCTTT 57.165 34.783 0.00 0.00 32.64 3.11
1955 3958 4.980590 TCAAAATGCGTATAGTGCCTTTG 58.019 39.130 11.55 11.55 36.37 2.77
1956 3959 4.457603 TCAAAATGCGTATAGTGCCTTTGT 59.542 37.500 14.62 0.00 36.40 2.83
1957 3960 5.048364 TCAAAATGCGTATAGTGCCTTTGTT 60.048 36.000 14.62 0.00 36.40 2.83
1958 3961 6.149640 TCAAAATGCGTATAGTGCCTTTGTTA 59.850 34.615 14.62 2.88 36.40 2.41
1959 3962 6.503589 AAATGCGTATAGTGCCTTTGTTAA 57.496 33.333 0.00 0.00 30.59 2.01
1960 3963 6.693315 AATGCGTATAGTGCCTTTGTTAAT 57.307 33.333 0.00 0.00 0.00 1.40
1961 3964 6.693315 ATGCGTATAGTGCCTTTGTTAATT 57.307 33.333 0.00 0.00 0.00 1.40
1962 3965 7.795482 ATGCGTATAGTGCCTTTGTTAATTA 57.205 32.000 0.00 0.00 0.00 1.40
1963 3966 7.007313 TGCGTATAGTGCCTTTGTTAATTAC 57.993 36.000 0.00 0.00 0.00 1.89
1964 3967 6.819649 TGCGTATAGTGCCTTTGTTAATTACT 59.180 34.615 0.00 0.00 0.00 2.24
1965 3968 7.980662 TGCGTATAGTGCCTTTGTTAATTACTA 59.019 33.333 0.00 0.00 0.00 1.82
1966 3969 8.485591 GCGTATAGTGCCTTTGTTAATTACTAG 58.514 37.037 0.00 0.00 0.00 2.57
1967 3970 8.975439 CGTATAGTGCCTTTGTTAATTACTAGG 58.025 37.037 0.00 0.00 34.40 3.02
1970 3973 9.969001 ATAGTGCCTTTGTTAATTACTAGGAAA 57.031 29.630 0.00 0.00 33.62 3.13
1971 3974 8.879427 AGTGCCTTTGTTAATTACTAGGAAAT 57.121 30.769 0.00 0.00 33.62 2.17
1972 3975 8.739972 AGTGCCTTTGTTAATTACTAGGAAATG 58.260 33.333 0.00 0.00 33.62 2.32
1973 3976 8.520351 GTGCCTTTGTTAATTACTAGGAAATGT 58.480 33.333 0.00 0.00 33.62 2.71
1974 3977 8.519526 TGCCTTTGTTAATTACTAGGAAATGTG 58.480 33.333 0.00 0.00 33.62 3.21
1975 3978 8.520351 GCCTTTGTTAATTACTAGGAAATGTGT 58.480 33.333 0.00 0.00 33.62 3.72
1979 3982 9.709495 TTGTTAATTACTAGGAAATGTGTACGT 57.291 29.630 0.00 0.00 0.00 3.57
1980 3983 9.142515 TGTTAATTACTAGGAAATGTGTACGTG 57.857 33.333 0.00 0.00 0.00 4.49
1981 3984 9.143631 GTTAATTACTAGGAAATGTGTACGTGT 57.856 33.333 0.00 0.00 0.00 4.49
1984 3987 9.880157 AATTACTAGGAAATGTGTACGTGTAAT 57.120 29.630 0.00 0.00 0.00 1.89
1986 3989 9.787532 TTACTAGGAAATGTGTACGTGTAATAC 57.212 33.333 0.00 0.00 0.00 1.89
1987 3990 7.260603 ACTAGGAAATGTGTACGTGTAATACC 58.739 38.462 0.00 0.00 0.00 2.73
1988 3991 5.422145 AGGAAATGTGTACGTGTAATACCC 58.578 41.667 0.00 0.00 0.00 3.69
1989 3992 4.268405 GGAAATGTGTACGTGTAATACCCG 59.732 45.833 0.00 0.00 0.00 5.28
1990 3993 4.454728 AATGTGTACGTGTAATACCCGT 57.545 40.909 6.17 6.17 38.53 5.28
1991 3994 3.932545 TGTGTACGTGTAATACCCGTT 57.067 42.857 6.21 0.00 36.12 4.44
1992 3995 3.832276 TGTGTACGTGTAATACCCGTTC 58.168 45.455 6.21 2.27 36.12 3.95
1993 3996 3.254411 TGTGTACGTGTAATACCCGTTCA 59.746 43.478 6.21 5.00 36.12 3.18
1994 3997 4.082300 TGTGTACGTGTAATACCCGTTCAT 60.082 41.667 6.21 0.00 35.07 2.57
1995 3998 5.124617 TGTGTACGTGTAATACCCGTTCATA 59.875 40.000 6.21 3.56 35.07 2.15
1996 3999 6.183360 TGTGTACGTGTAATACCCGTTCATAT 60.183 38.462 6.21 0.00 35.07 1.78
1997 4000 6.360681 GTGTACGTGTAATACCCGTTCATATC 59.639 42.308 6.21 0.00 35.07 1.63
1998 4001 5.518848 ACGTGTAATACCCGTTCATATCA 57.481 39.130 0.00 0.00 0.00 2.15
1999 4002 5.526115 ACGTGTAATACCCGTTCATATCAG 58.474 41.667 0.00 0.00 0.00 2.90
2000 4003 4.921515 CGTGTAATACCCGTTCATATCAGG 59.078 45.833 0.00 0.00 0.00 3.86
2001 4004 4.689345 GTGTAATACCCGTTCATATCAGGC 59.311 45.833 0.00 0.00 0.00 4.85
2002 4005 4.345547 TGTAATACCCGTTCATATCAGGCA 59.654 41.667 0.00 0.00 0.00 4.75
2003 4006 4.640771 AATACCCGTTCATATCAGGCAT 57.359 40.909 0.00 0.00 0.00 4.40
2004 4007 5.755409 AATACCCGTTCATATCAGGCATA 57.245 39.130 0.00 0.00 0.00 3.14
2005 4008 5.755409 ATACCCGTTCATATCAGGCATAA 57.245 39.130 0.00 0.00 0.00 1.90
2006 4009 4.431416 ACCCGTTCATATCAGGCATAAA 57.569 40.909 0.00 0.00 0.00 1.40
2007 4010 4.389374 ACCCGTTCATATCAGGCATAAAG 58.611 43.478 0.00 0.00 0.00 1.85
2008 4011 4.141482 ACCCGTTCATATCAGGCATAAAGT 60.141 41.667 0.00 0.00 0.00 2.66
2009 4012 4.821805 CCCGTTCATATCAGGCATAAAGTT 59.178 41.667 0.00 0.00 0.00 2.66
2010 4013 5.049405 CCCGTTCATATCAGGCATAAAGTTC 60.049 44.000 0.00 0.00 0.00 3.01
2011 4014 5.527214 CCGTTCATATCAGGCATAAAGTTCA 59.473 40.000 0.00 0.00 0.00 3.18
2012 4015 6.205464 CCGTTCATATCAGGCATAAAGTTCAT 59.795 38.462 0.00 0.00 0.00 2.57
2013 4016 7.255242 CCGTTCATATCAGGCATAAAGTTCATT 60.255 37.037 0.00 0.00 0.00 2.57
2014 4017 7.588854 CGTTCATATCAGGCATAAAGTTCATTG 59.411 37.037 0.00 0.00 0.00 2.82
2015 4018 6.973843 TCATATCAGGCATAAAGTTCATTGC 58.026 36.000 0.00 0.00 0.00 3.56
2016 4019 6.546772 TCATATCAGGCATAAAGTTCATTGCA 59.453 34.615 6.88 0.00 36.82 4.08
2017 4020 4.439305 TCAGGCATAAAGTTCATTGCAC 57.561 40.909 0.00 0.00 36.82 4.57
2018 4021 3.825585 TCAGGCATAAAGTTCATTGCACA 59.174 39.130 0.00 0.00 36.82 4.57
2019 4022 4.463539 TCAGGCATAAAGTTCATTGCACAT 59.536 37.500 0.00 0.00 36.82 3.21
2020 4023 5.651576 TCAGGCATAAAGTTCATTGCACATA 59.348 36.000 0.00 0.00 36.82 2.29
2021 4024 5.975344 CAGGCATAAAGTTCATTGCACATAG 59.025 40.000 0.00 0.00 36.82 2.23
2022 4025 5.887598 AGGCATAAAGTTCATTGCACATAGA 59.112 36.000 0.00 0.00 36.82 1.98
2023 4026 6.548622 AGGCATAAAGTTCATTGCACATAGAT 59.451 34.615 0.00 0.00 36.82 1.98
2024 4027 6.639686 GGCATAAAGTTCATTGCACATAGATG 59.360 38.462 0.00 0.00 36.82 2.90
2025 4028 7.198390 GCATAAAGTTCATTGCACATAGATGT 58.802 34.615 0.00 0.00 42.84 3.06
2026 4029 7.377928 GCATAAAGTTCATTGCACATAGATGTC 59.622 37.037 0.00 0.00 39.39 3.06
2027 4030 6.822667 AAAGTTCATTGCACATAGATGTCA 57.177 33.333 0.00 0.00 39.39 3.58
2028 4031 6.432607 AAGTTCATTGCACATAGATGTCAG 57.567 37.500 0.00 0.00 39.39 3.51
2029 4032 4.880120 AGTTCATTGCACATAGATGTCAGG 59.120 41.667 0.00 0.00 39.39 3.86
2030 4033 3.208594 TCATTGCACATAGATGTCAGGC 58.791 45.455 0.00 0.00 39.39 4.85
2031 4034 2.785540 TTGCACATAGATGTCAGGCA 57.214 45.000 2.88 2.88 39.39 4.75
2032 4035 2.320745 TGCACATAGATGTCAGGCAG 57.679 50.000 2.88 0.00 39.39 4.85
2033 4036 1.832998 TGCACATAGATGTCAGGCAGA 59.167 47.619 2.88 0.00 39.39 4.26
2034 4037 2.236893 TGCACATAGATGTCAGGCAGAA 59.763 45.455 2.88 0.00 39.39 3.02
2035 4038 3.273434 GCACATAGATGTCAGGCAGAAA 58.727 45.455 0.00 0.00 39.39 2.52
2036 4039 3.691118 GCACATAGATGTCAGGCAGAAAA 59.309 43.478 0.00 0.00 39.39 2.29
2037 4040 4.337555 GCACATAGATGTCAGGCAGAAAAT 59.662 41.667 0.00 0.00 39.39 1.82
2038 4041 5.163581 GCACATAGATGTCAGGCAGAAAATT 60.164 40.000 0.00 0.00 39.39 1.82
2039 4042 6.263344 CACATAGATGTCAGGCAGAAAATTG 58.737 40.000 0.00 0.00 39.39 2.32
2040 4043 6.094464 CACATAGATGTCAGGCAGAAAATTGA 59.906 38.462 0.00 0.00 39.39 2.57
2041 4044 6.832384 ACATAGATGTCAGGCAGAAAATTGAT 59.168 34.615 0.00 0.00 35.87 2.57
2042 4045 7.341256 ACATAGATGTCAGGCAGAAAATTGATT 59.659 33.333 0.00 0.00 35.87 2.57
2043 4046 5.962433 AGATGTCAGGCAGAAAATTGATTG 58.038 37.500 0.00 0.00 0.00 2.67
2044 4047 3.916761 TGTCAGGCAGAAAATTGATTGC 58.083 40.909 0.00 0.96 35.87 3.56
2045 4048 2.919229 GTCAGGCAGAAAATTGATTGCG 59.081 45.455 0.00 0.00 37.43 4.85
2046 4049 2.094597 TCAGGCAGAAAATTGATTGCGG 60.095 45.455 0.00 0.00 37.43 5.69
2047 4050 2.094597 CAGGCAGAAAATTGATTGCGGA 60.095 45.455 0.00 0.00 37.43 5.54
2048 4051 2.165030 AGGCAGAAAATTGATTGCGGAG 59.835 45.455 0.00 0.00 37.43 4.63
2049 4052 2.094545 GGCAGAAAATTGATTGCGGAGT 60.095 45.455 0.00 0.00 37.43 3.85
2050 4053 3.128589 GGCAGAAAATTGATTGCGGAGTA 59.871 43.478 0.00 0.00 37.43 2.59
2051 4054 4.346129 GCAGAAAATTGATTGCGGAGTAG 58.654 43.478 0.00 0.00 0.00 2.57
2052 4055 4.731773 GCAGAAAATTGATTGCGGAGTAGG 60.732 45.833 0.00 0.00 0.00 3.18
2053 4056 4.635765 CAGAAAATTGATTGCGGAGTAGGA 59.364 41.667 0.00 0.00 0.00 2.94
2054 4057 5.297776 CAGAAAATTGATTGCGGAGTAGGAT 59.702 40.000 0.00 0.00 0.00 3.24
2055 4058 6.483307 CAGAAAATTGATTGCGGAGTAGGATA 59.517 38.462 0.00 0.00 0.00 2.59
2056 4059 6.483640 AGAAAATTGATTGCGGAGTAGGATAC 59.516 38.462 0.00 0.00 43.47 2.24
2057 4060 3.746045 TTGATTGCGGAGTAGGATACC 57.254 47.619 0.00 0.00 44.47 2.73
2058 4061 2.673258 TGATTGCGGAGTAGGATACCA 58.327 47.619 0.00 0.00 44.47 3.25
2059 4062 3.035363 TGATTGCGGAGTAGGATACCAA 58.965 45.455 0.00 0.00 44.47 3.67
2060 4063 3.646162 TGATTGCGGAGTAGGATACCAAT 59.354 43.478 0.00 0.00 44.47 3.16
2061 4064 4.102524 TGATTGCGGAGTAGGATACCAATT 59.897 41.667 0.00 0.00 44.47 2.32
2062 4065 5.305902 TGATTGCGGAGTAGGATACCAATTA 59.694 40.000 0.00 0.00 44.47 1.40
2063 4066 4.595762 TGCGGAGTAGGATACCAATTAC 57.404 45.455 0.00 0.00 44.47 1.89
2064 4067 3.005050 TGCGGAGTAGGATACCAATTACG 59.995 47.826 0.00 0.00 44.47 3.18
2065 4068 3.572584 CGGAGTAGGATACCAATTACGC 58.427 50.000 0.00 0.00 44.47 4.42
2066 4069 3.572584 GGAGTAGGATACCAATTACGCG 58.427 50.000 3.53 3.53 44.47 6.01
2067 4070 3.005155 GGAGTAGGATACCAATTACGCGT 59.995 47.826 19.17 19.17 44.47 6.01
2068 4071 4.500375 GGAGTAGGATACCAATTACGCGTT 60.500 45.833 20.78 0.00 44.47 4.84
2069 4072 5.278463 GGAGTAGGATACCAATTACGCGTTA 60.278 44.000 20.78 9.47 44.47 3.18
2070 4073 6.147864 AGTAGGATACCAATTACGCGTTAA 57.852 37.500 20.78 10.44 44.47 2.01
2071 4074 6.752168 AGTAGGATACCAATTACGCGTTAAT 58.248 36.000 20.78 12.41 44.47 1.40
2072 4075 7.212274 AGTAGGATACCAATTACGCGTTAATT 58.788 34.615 20.78 17.56 44.47 1.40
2073 4076 8.359642 AGTAGGATACCAATTACGCGTTAATTA 58.640 33.333 20.78 7.24 44.47 1.40
2074 4077 7.412137 AGGATACCAATTACGCGTTAATTAC 57.588 36.000 20.78 10.10 38.17 1.89
2075 4078 6.985645 AGGATACCAATTACGCGTTAATTACA 59.014 34.615 20.78 9.69 38.17 2.41
2076 4079 7.658575 AGGATACCAATTACGCGTTAATTACAT 59.341 33.333 20.78 13.31 38.17 2.29
2077 4080 7.742963 GGATACCAATTACGCGTTAATTACATG 59.257 37.037 20.78 9.82 38.17 3.21
2078 4081 5.812652 ACCAATTACGCGTTAATTACATGG 58.187 37.500 20.78 18.92 38.17 3.66
2079 4082 5.585445 ACCAATTACGCGTTAATTACATGGA 59.415 36.000 20.78 0.00 38.17 3.41
2080 4083 6.261381 ACCAATTACGCGTTAATTACATGGAT 59.739 34.615 20.78 7.71 38.17 3.41
2081 4084 6.795114 CCAATTACGCGTTAATTACATGGATC 59.205 38.462 20.78 0.00 38.17 3.36
2082 4085 5.564213 TTACGCGTTAATTACATGGATCG 57.436 39.130 20.78 0.00 0.00 3.69
2083 4086 2.220133 ACGCGTTAATTACATGGATCGC 59.780 45.455 5.58 2.20 39.21 4.58
2084 4087 2.411031 CGCGTTAATTACATGGATCGCC 60.411 50.000 0.00 0.00 39.38 5.54
2085 4088 2.095919 GCGTTAATTACATGGATCGCCC 60.096 50.000 0.00 0.00 37.14 6.13
2096 4099 3.500448 TGGATCGCCCATATTTGCTAA 57.500 42.857 0.00 0.00 40.82 3.09
2097 4100 3.411446 TGGATCGCCCATATTTGCTAAG 58.589 45.455 0.00 0.00 40.82 2.18
2098 4101 3.181445 TGGATCGCCCATATTTGCTAAGT 60.181 43.478 0.00 0.00 40.82 2.24
2099 4102 3.821033 GGATCGCCCATATTTGCTAAGTT 59.179 43.478 0.00 0.00 34.14 2.66
2100 4103 5.001232 GGATCGCCCATATTTGCTAAGTTA 58.999 41.667 0.00 0.00 34.14 2.24
2101 4104 5.648092 GGATCGCCCATATTTGCTAAGTTAT 59.352 40.000 0.00 0.00 34.14 1.89
2102 4105 6.151144 GGATCGCCCATATTTGCTAAGTTATT 59.849 38.462 0.00 0.00 34.14 1.40
2103 4106 7.335924 GGATCGCCCATATTTGCTAAGTTATTA 59.664 37.037 0.00 0.00 34.14 0.98
2104 4107 8.630054 ATCGCCCATATTTGCTAAGTTATTAA 57.370 30.769 0.00 0.00 0.00 1.40
2105 4108 8.630054 TCGCCCATATTTGCTAAGTTATTAAT 57.370 30.769 0.00 0.00 0.00 1.40
2106 4109 9.073475 TCGCCCATATTTGCTAAGTTATTAATT 57.927 29.630 0.00 0.00 0.00 1.40
2107 4110 9.128107 CGCCCATATTTGCTAAGTTATTAATTG 57.872 33.333 0.00 0.00 0.00 2.32
2108 4111 8.925700 GCCCATATTTGCTAAGTTATTAATTGC 58.074 33.333 0.00 0.00 0.00 3.56
2109 4112 9.979578 CCCATATTTGCTAAGTTATTAATTGCA 57.020 29.630 0.00 0.00 0.00 4.08
2123 4126 9.173939 GTTATTAATTGCATAGTCATGTTGAGC 57.826 33.333 0.00 0.00 34.40 4.26
2124 4127 6.756299 TTAATTGCATAGTCATGTTGAGCA 57.244 33.333 0.00 0.00 34.40 4.26
2125 4128 4.627611 ATTGCATAGTCATGTTGAGCAC 57.372 40.909 0.00 0.00 34.40 4.40
2126 4129 3.056588 TGCATAGTCATGTTGAGCACA 57.943 42.857 0.00 0.00 40.71 4.57
2134 4137 2.665649 ATGTTGAGCACATGCCATTG 57.334 45.000 0.00 0.00 45.12 2.82
2135 4138 1.618487 TGTTGAGCACATGCCATTGA 58.382 45.000 0.00 0.00 43.38 2.57
2136 4139 1.962100 TGTTGAGCACATGCCATTGAA 59.038 42.857 0.00 0.00 43.38 2.69
2137 4140 2.029739 TGTTGAGCACATGCCATTGAAG 60.030 45.455 0.00 0.00 43.38 3.02
2138 4141 0.528924 TGAGCACATGCCATTGAAGC 59.471 50.000 0.00 0.00 43.38 3.86
2139 4142 0.528924 GAGCACATGCCATTGAAGCA 59.471 50.000 0.00 0.00 45.94 3.91
2140 4143 0.970640 AGCACATGCCATTGAAGCAA 59.029 45.000 0.00 0.00 44.83 3.91
2141 4144 1.553248 AGCACATGCCATTGAAGCAAT 59.447 42.857 0.00 0.00 44.83 3.56
2142 4145 2.761767 AGCACATGCCATTGAAGCAATA 59.238 40.909 0.00 0.00 44.83 1.90
2143 4146 3.386726 AGCACATGCCATTGAAGCAATAT 59.613 39.130 0.00 0.00 44.83 1.28
2144 4147 4.585581 AGCACATGCCATTGAAGCAATATA 59.414 37.500 0.00 0.00 44.83 0.86
2145 4148 5.245301 AGCACATGCCATTGAAGCAATATAT 59.755 36.000 0.00 0.00 44.83 0.86
2146 4149 5.347635 GCACATGCCATTGAAGCAATATATG 59.652 40.000 0.00 0.00 44.83 1.78
2147 4150 6.452242 CACATGCCATTGAAGCAATATATGT 58.548 36.000 0.00 0.00 44.83 2.29
2148 4151 6.364976 CACATGCCATTGAAGCAATATATGTG 59.635 38.462 18.27 18.27 44.83 3.21
2149 4152 5.456548 TGCCATTGAAGCAATATATGTGG 57.543 39.130 0.00 0.00 37.28 4.17
2150 4153 4.894705 TGCCATTGAAGCAATATATGTGGT 59.105 37.500 0.00 0.00 37.28 4.16
2151 4154 5.363292 TGCCATTGAAGCAATATATGTGGTT 59.637 36.000 10.23 10.23 39.31 3.67
2152 4155 6.127111 TGCCATTGAAGCAATATATGTGGTTT 60.127 34.615 11.18 0.00 36.86 3.27
2153 4156 6.201425 GCCATTGAAGCAATATATGTGGTTTG 59.799 38.462 11.18 7.67 36.86 2.93
2154 4157 7.490840 CCATTGAAGCAATATATGTGGTTTGA 58.509 34.615 11.18 6.35 36.86 2.69
2155 4158 8.145767 CCATTGAAGCAATATATGTGGTTTGAT 58.854 33.333 11.18 7.64 36.86 2.57
2156 4159 9.537192 CATTGAAGCAATATATGTGGTTTGATT 57.463 29.630 11.18 0.90 36.86 2.57
2157 4160 8.929827 TTGAAGCAATATATGTGGTTTGATTG 57.070 30.769 11.18 0.00 36.86 2.67
2158 4161 8.291191 TGAAGCAATATATGTGGTTTGATTGA 57.709 30.769 11.18 0.00 36.86 2.57
2159 4162 8.190122 TGAAGCAATATATGTGGTTTGATTGAC 58.810 33.333 11.18 0.00 36.86 3.18
2160 4163 7.643569 AGCAATATATGTGGTTTGATTGACA 57.356 32.000 0.00 0.00 0.00 3.58
2161 4164 7.483307 AGCAATATATGTGGTTTGATTGACAC 58.517 34.615 0.00 0.00 0.00 3.67
2162 4165 7.340232 AGCAATATATGTGGTTTGATTGACACT 59.660 33.333 0.00 0.00 35.02 3.55
2163 4166 7.433131 GCAATATATGTGGTTTGATTGACACTG 59.567 37.037 0.00 0.00 35.02 3.66
2164 4167 8.461222 CAATATATGTGGTTTGATTGACACTGT 58.539 33.333 0.00 0.00 35.02 3.55
2165 4168 6.899393 ATATGTGGTTTGATTGACACTGTT 57.101 33.333 0.00 0.00 35.02 3.16
2166 4169 5.596836 ATGTGGTTTGATTGACACTGTTT 57.403 34.783 0.00 0.00 35.02 2.83
2167 4170 4.742417 TGTGGTTTGATTGACACTGTTTG 58.258 39.130 0.00 0.00 35.02 2.93
2168 4171 4.460731 TGTGGTTTGATTGACACTGTTTGA 59.539 37.500 0.00 0.00 35.02 2.69
2169 4172 5.126869 TGTGGTTTGATTGACACTGTTTGAT 59.873 36.000 0.00 0.00 35.02 2.57
2170 4173 5.459762 GTGGTTTGATTGACACTGTTTGATG 59.540 40.000 0.00 0.00 0.00 3.07
2171 4174 5.359292 TGGTTTGATTGACACTGTTTGATGA 59.641 36.000 0.00 0.00 0.00 2.92
2172 4175 5.687285 GGTTTGATTGACACTGTTTGATGAC 59.313 40.000 0.00 0.00 0.00 3.06
2173 4176 6.460123 GGTTTGATTGACACTGTTTGATGACT 60.460 38.462 0.00 0.00 0.00 3.41
2174 4177 5.678132 TGATTGACACTGTTTGATGACTG 57.322 39.130 0.00 0.00 0.00 3.51
2175 4178 5.367302 TGATTGACACTGTTTGATGACTGA 58.633 37.500 0.00 0.00 0.00 3.41
2176 4179 5.467735 TGATTGACACTGTTTGATGACTGAG 59.532 40.000 0.00 0.00 0.00 3.35
2177 4180 4.670896 TGACACTGTTTGATGACTGAGA 57.329 40.909 0.00 0.00 0.00 3.27
2178 4181 4.625028 TGACACTGTTTGATGACTGAGAG 58.375 43.478 0.00 0.00 0.00 3.20
2179 4182 4.100035 TGACACTGTTTGATGACTGAGAGT 59.900 41.667 0.00 0.00 0.00 3.24
2180 4183 5.028549 ACACTGTTTGATGACTGAGAGTT 57.971 39.130 0.00 0.00 0.00 3.01
2181 4184 4.813161 ACACTGTTTGATGACTGAGAGTTG 59.187 41.667 0.00 0.00 0.00 3.16
2182 4185 4.813161 CACTGTTTGATGACTGAGAGTTGT 59.187 41.667 0.00 0.00 0.00 3.32
2183 4186 5.295292 CACTGTTTGATGACTGAGAGTTGTT 59.705 40.000 0.00 0.00 0.00 2.83
2184 4187 5.295292 ACTGTTTGATGACTGAGAGTTGTTG 59.705 40.000 0.00 0.00 0.00 3.33
2185 4188 4.576053 TGTTTGATGACTGAGAGTTGTTGG 59.424 41.667 0.00 0.00 0.00 3.77
2186 4189 4.687901 TTGATGACTGAGAGTTGTTGGA 57.312 40.909 0.00 0.00 0.00 3.53
2187 4190 4.897509 TGATGACTGAGAGTTGTTGGAT 57.102 40.909 0.00 0.00 0.00 3.41
2188 4191 4.825422 TGATGACTGAGAGTTGTTGGATC 58.175 43.478 0.00 0.00 0.00 3.36
2189 4192 4.529769 TGATGACTGAGAGTTGTTGGATCT 59.470 41.667 0.00 0.00 0.00 2.75
2190 4193 5.716703 TGATGACTGAGAGTTGTTGGATCTA 59.283 40.000 0.00 0.00 0.00 1.98
2191 4194 5.392767 TGACTGAGAGTTGTTGGATCTAC 57.607 43.478 0.00 0.00 0.00 2.59
2192 4195 5.080337 TGACTGAGAGTTGTTGGATCTACT 58.920 41.667 0.00 0.00 0.00 2.57
2193 4196 6.246163 TGACTGAGAGTTGTTGGATCTACTA 58.754 40.000 0.00 0.00 0.00 1.82
2194 4197 6.151312 TGACTGAGAGTTGTTGGATCTACTAC 59.849 42.308 0.00 0.00 0.00 2.73
2195 4198 6.249951 ACTGAGAGTTGTTGGATCTACTACT 58.750 40.000 12.51 12.51 34.96 2.57
2196 4199 6.722129 ACTGAGAGTTGTTGGATCTACTACTT 59.278 38.462 13.37 7.01 32.96 2.24
2197 4200 7.233757 ACTGAGAGTTGTTGGATCTACTACTTT 59.766 37.037 13.37 9.77 32.96 2.66
2198 4201 7.378966 TGAGAGTTGTTGGATCTACTACTTTG 58.621 38.462 13.37 0.00 32.96 2.77
2199 4202 6.702329 AGAGTTGTTGGATCTACTACTTTGG 58.298 40.000 13.37 0.00 32.96 3.28
2200 4203 6.497259 AGAGTTGTTGGATCTACTACTTTGGA 59.503 38.462 13.37 0.00 32.96 3.53
2201 4204 7.181125 AGAGTTGTTGGATCTACTACTTTGGAT 59.819 37.037 13.37 0.00 32.96 3.41
2202 4205 7.331791 AGTTGTTGGATCTACTACTTTGGATC 58.668 38.462 8.78 0.00 35.28 3.36
2261 4264 9.719355 ATTTTCAACACTTTTACCTTTCAAAGT 57.281 25.926 0.00 0.00 42.73 2.66
2262 4265 8.751302 TTTCAACACTTTTACCTTTCAAAGTC 57.249 30.769 0.00 0.00 40.52 3.01
2263 4266 7.455641 TCAACACTTTTACCTTTCAAAGTCA 57.544 32.000 0.00 0.00 40.52 3.41
2264 4267 7.887381 TCAACACTTTTACCTTTCAAAGTCAA 58.113 30.769 0.00 0.00 40.52 3.18
2265 4268 8.361139 TCAACACTTTTACCTTTCAAAGTCAAA 58.639 29.630 0.00 0.00 40.52 2.69
2266 4269 9.150348 CAACACTTTTACCTTTCAAAGTCAAAT 57.850 29.630 0.00 0.00 40.52 2.32
2267 4270 8.926715 ACACTTTTACCTTTCAAAGTCAAATC 57.073 30.769 0.00 0.00 40.52 2.17
2268 4271 8.527810 ACACTTTTACCTTTCAAAGTCAAATCA 58.472 29.630 0.00 0.00 40.52 2.57
2269 4272 9.533253 CACTTTTACCTTTCAAAGTCAAATCAT 57.467 29.630 0.00 0.00 40.52 2.45
2270 4273 9.533253 ACTTTTACCTTTCAAAGTCAAATCATG 57.467 29.630 0.00 0.00 38.59 3.07
2271 4274 8.885494 TTTTACCTTTCAAAGTCAAATCATGG 57.115 30.769 0.00 0.00 0.00 3.66
2272 4275 7.831691 TTACCTTTCAAAGTCAAATCATGGA 57.168 32.000 0.00 0.00 0.00 3.41
2273 4276 6.923199 ACCTTTCAAAGTCAAATCATGGAT 57.077 33.333 0.00 0.00 0.00 3.41
2274 4277 9.527157 TTACCTTTCAAAGTCAAATCATGGATA 57.473 29.630 0.00 0.00 0.00 2.59
2275 4278 7.830739 ACCTTTCAAAGTCAAATCATGGATAC 58.169 34.615 0.00 0.00 0.00 2.24
2276 4279 7.093771 ACCTTTCAAAGTCAAATCATGGATACC 60.094 37.037 0.00 0.00 0.00 2.73
2277 4280 7.123247 CCTTTCAAAGTCAAATCATGGATACCT 59.877 37.037 0.00 0.00 0.00 3.08
2278 4281 9.177608 CTTTCAAAGTCAAATCATGGATACCTA 57.822 33.333 0.00 0.00 0.00 3.08
2279 4282 9.527157 TTTCAAAGTCAAATCATGGATACCTAA 57.473 29.630 0.00 0.00 0.00 2.69
2280 4283 9.699410 TTCAAAGTCAAATCATGGATACCTAAT 57.301 29.630 0.00 0.00 0.00 1.73
2281 4284 9.342308 TCAAAGTCAAATCATGGATACCTAATC 57.658 33.333 0.00 0.00 0.00 1.75
2282 4285 9.347240 CAAAGTCAAATCATGGATACCTAATCT 57.653 33.333 0.00 0.00 34.75 2.40
2283 4286 9.927081 AAAGTCAAATCATGGATACCTAATCTT 57.073 29.630 0.00 0.00 34.75 2.40
2364 4367 1.192803 AGACGGTCTCCTCAAACCCC 61.193 60.000 4.45 0.00 31.49 4.95
2369 4372 1.003696 GGTCTCCTCAAACCCCTTCTG 59.996 57.143 0.00 0.00 0.00 3.02
2372 4375 3.519913 GTCTCCTCAAACCCCTTCTGTAT 59.480 47.826 0.00 0.00 0.00 2.29
2379 4383 1.298953 ACCCCTTCTGTATGCCATGT 58.701 50.000 0.00 0.00 0.00 3.21
2399 4403 2.159179 AGGTGGCCCAATTAATGACC 57.841 50.000 0.00 0.00 0.00 4.02
2401 4405 0.744281 GTGGCCCAATTAATGACCGG 59.256 55.000 0.00 0.00 0.00 5.28
2403 4407 0.744281 GGCCCAATTAATGACCGGTG 59.256 55.000 14.63 0.00 0.00 4.94
2405 4409 1.676006 GCCCAATTAATGACCGGTGAG 59.324 52.381 14.63 0.00 0.00 3.51
2407 4411 3.206150 CCCAATTAATGACCGGTGAGAG 58.794 50.000 14.63 0.00 0.00 3.20
2408 4412 3.370527 CCCAATTAATGACCGGTGAGAGT 60.371 47.826 14.63 0.00 0.00 3.24
2409 4413 4.261801 CCAATTAATGACCGGTGAGAGTT 58.738 43.478 14.63 0.00 0.00 3.01
2410 4414 5.424757 CCAATTAATGACCGGTGAGAGTTA 58.575 41.667 14.63 0.00 0.00 2.24
2411 4415 6.055588 CCAATTAATGACCGGTGAGAGTTAT 58.944 40.000 14.63 0.00 0.00 1.89
2412 4416 6.017934 CCAATTAATGACCGGTGAGAGTTATG 60.018 42.308 14.63 1.80 0.00 1.90
2413 4417 5.925506 TTAATGACCGGTGAGAGTTATGA 57.074 39.130 14.63 0.00 0.00 2.15
2414 4418 6.479972 TTAATGACCGGTGAGAGTTATGAT 57.520 37.500 14.63 0.00 0.00 2.45
2415 4419 3.801114 TGACCGGTGAGAGTTATGATG 57.199 47.619 14.63 0.00 0.00 3.07
2416 4420 2.430694 TGACCGGTGAGAGTTATGATGG 59.569 50.000 14.63 0.00 0.00 3.51
2417 4421 2.431057 GACCGGTGAGAGTTATGATGGT 59.569 50.000 14.63 0.00 0.00 3.55
2418 4422 2.838202 ACCGGTGAGAGTTATGATGGTT 59.162 45.455 6.12 0.00 0.00 3.67
2419 4423 3.198068 CCGGTGAGAGTTATGATGGTTG 58.802 50.000 0.00 0.00 0.00 3.77
2420 4424 3.369471 CCGGTGAGAGTTATGATGGTTGT 60.369 47.826 0.00 0.00 0.00 3.32
2421 4425 3.865745 CGGTGAGAGTTATGATGGTTGTC 59.134 47.826 0.00 0.00 0.00 3.18
2422 4426 4.382040 CGGTGAGAGTTATGATGGTTGTCT 60.382 45.833 0.00 0.00 0.00 3.41
2423 4427 5.112686 GGTGAGAGTTATGATGGTTGTCTC 58.887 45.833 0.00 0.00 0.00 3.36
2424 4428 5.105146 GGTGAGAGTTATGATGGTTGTCTCT 60.105 44.000 0.00 0.00 34.21 3.10
2425 4429 6.039616 GTGAGAGTTATGATGGTTGTCTCTC 58.960 44.000 10.95 10.95 43.51 3.20
2429 4433 5.276440 AGTTATGATGGTTGTCTCTCCTCT 58.724 41.667 0.00 0.00 0.00 3.69
2430 4434 5.362430 AGTTATGATGGTTGTCTCTCCTCTC 59.638 44.000 0.00 0.00 0.00 3.20
2431 4435 2.461695 TGATGGTTGTCTCTCCTCTCC 58.538 52.381 0.00 0.00 0.00 3.71
2433 4437 0.787084 TGGTTGTCTCTCCTCTCCCT 59.213 55.000 0.00 0.00 0.00 4.20
2434 4438 1.272760 TGGTTGTCTCTCCTCTCCCTC 60.273 57.143 0.00 0.00 0.00 4.30
2435 4439 1.480789 GTTGTCTCTCCTCTCCCTCC 58.519 60.000 0.00 0.00 0.00 4.30
2436 4440 1.006639 GTTGTCTCTCCTCTCCCTCCT 59.993 57.143 0.00 0.00 0.00 3.69
2438 4442 0.185175 GTCTCTCCTCTCCCTCCTCC 59.815 65.000 0.00 0.00 0.00 4.30
2439 4443 0.996762 TCTCTCCTCTCCCTCCTCCC 60.997 65.000 0.00 0.00 0.00 4.30
2440 4444 2.015726 TCTCCTCTCCCTCCTCCCC 61.016 68.421 0.00 0.00 0.00 4.81
2441 4445 3.036959 TCCTCTCCCTCCTCCCCC 61.037 72.222 0.00 0.00 0.00 5.40
2459 4463 4.354943 CTGTCCCCCTCCCCCTGT 62.355 72.222 0.00 0.00 0.00 4.00
2460 4464 4.348495 TGTCCCCCTCCCCCTGTC 62.348 72.222 0.00 0.00 0.00 3.51
2466 4470 4.825679 CCTCCCCCTGTCCCCCTC 62.826 77.778 0.00 0.00 0.00 4.30
2469 4473 4.825679 CCCCCTGTCCCCCTCCTC 62.826 77.778 0.00 0.00 0.00 3.71
2470 4474 4.825679 CCCCTGTCCCCCTCCTCC 62.826 77.778 0.00 0.00 0.00 4.30
2471 4475 4.825679 CCCTGTCCCCCTCCTCCC 62.826 77.778 0.00 0.00 0.00 4.30
2472 4476 4.825679 CCTGTCCCCCTCCTCCCC 62.826 77.778 0.00 0.00 0.00 4.81
2473 4477 3.700350 CTGTCCCCCTCCTCCCCT 61.700 72.222 0.00 0.00 0.00 4.79
2474 4478 3.695825 TGTCCCCCTCCTCCCCTC 61.696 72.222 0.00 0.00 0.00 4.30
2475 4479 4.500826 GTCCCCCTCCTCCCCTCC 62.501 77.778 0.00 0.00 0.00 4.30
2479 4483 3.711782 CCCTCCTCCCCTCCCCTT 61.712 72.222 0.00 0.00 0.00 3.95
2480 4484 2.367512 CCTCCTCCCCTCCCCTTG 60.368 72.222 0.00 0.00 0.00 3.61
2481 4485 3.093172 CTCCTCCCCTCCCCTTGC 61.093 72.222 0.00 0.00 0.00 4.01
2482 4486 4.760220 TCCTCCCCTCCCCTTGCC 62.760 72.222 0.00 0.00 0.00 4.52
2507 4609 3.090532 ATGCTTCCCCCGACCCTC 61.091 66.667 0.00 0.00 0.00 4.30
2510 4612 4.416601 CTTCCCCCGACCCTCCCT 62.417 72.222 0.00 0.00 0.00 4.20
2511 4613 4.410033 TTCCCCCGACCCTCCCTC 62.410 72.222 0.00 0.00 0.00 4.30
2516 4618 2.764547 CCGACCCTCCCTCTTCCC 60.765 72.222 0.00 0.00 0.00 3.97
2518 4620 2.764547 GACCCTCCCTCTTCCCCG 60.765 72.222 0.00 0.00 0.00 5.73
2519 4621 3.612607 ACCCTCCCTCTTCCCCGT 61.613 66.667 0.00 0.00 0.00 5.28
2577 7884 3.927163 CTCCGGGCGTGCGTTAGTT 62.927 63.158 0.00 0.00 0.00 2.24
2580 7887 2.726691 CGGGCGTGCGTTAGTTCTG 61.727 63.158 0.00 0.00 0.00 3.02
2581 7888 2.388232 GGGCGTGCGTTAGTTCTGG 61.388 63.158 0.00 0.00 0.00 3.86
2582 7889 2.474712 GCGTGCGTTAGTTCTGGC 59.525 61.111 0.00 0.00 0.00 4.85
2583 7890 2.769617 CGTGCGTTAGTTCTGGCG 59.230 61.111 0.00 0.00 0.00 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
325 334 1.492176 CTGCCAATCCCACAGATAGGT 59.508 52.381 0.00 0.00 33.66 3.08
328 337 3.973305 TGTATCTGCCAATCCCACAGATA 59.027 43.478 7.64 7.64 46.58 1.98
347 356 1.470805 CGGAGTTGATGGCATCGTGTA 60.471 52.381 21.65 1.95 0.00 2.90
399 409 4.363991 AAATCTGCCTCAACTTCACTCT 57.636 40.909 0.00 0.00 0.00 3.24
405 415 4.636206 GGACGAATAAATCTGCCTCAACTT 59.364 41.667 0.00 0.00 0.00 2.66
642 660 1.672881 GCTGCAAAAGTCCATATCGCT 59.327 47.619 0.00 0.00 0.00 4.93
643 661 1.595489 CGCTGCAAAAGTCCATATCGC 60.595 52.381 0.00 0.00 0.00 4.58
655 673 2.027073 CACCGTAGAGCGCTGCAAA 61.027 57.895 18.48 0.00 39.71 3.68
656 674 2.432456 CACCGTAGAGCGCTGCAA 60.432 61.111 18.48 0.00 39.71 4.08
657 675 3.680786 ACACCGTAGAGCGCTGCA 61.681 61.111 18.48 0.00 39.71 4.41
658 676 3.181967 CACACCGTAGAGCGCTGC 61.182 66.667 18.48 6.71 39.71 5.25
659 677 1.515088 CTCACACCGTAGAGCGCTG 60.515 63.158 18.48 1.17 39.71 5.18
660 678 2.878429 CTCACACCGTAGAGCGCT 59.122 61.111 11.27 11.27 39.71 5.92
661 679 2.881352 GCTCACACCGTAGAGCGC 60.881 66.667 0.00 0.00 46.53 5.92
664 682 3.314339 CGAAGCTCACACCGTAGAG 57.686 57.895 0.00 0.00 35.01 2.43
692 710 0.742505 ACGTCGTTGAAGGTGACAGA 59.257 50.000 0.00 0.00 32.91 3.41
725 743 1.466856 TGAGCCGTACGTCCATACTT 58.533 50.000 15.21 0.00 0.00 2.24
766 784 6.015940 ACAAGGAAAATTAGCCTCAAGTCAAG 60.016 38.462 0.00 0.00 32.07 3.02
798 816 1.529226 TCATCCGCGTTTGATTGGTT 58.471 45.000 4.92 0.00 0.00 3.67
817 835 5.295950 TCATCCAATGTTGTTTCGCAAATT 58.704 33.333 0.00 0.00 39.03 1.82
821 839 4.517952 AATCATCCAATGTTGTTTCGCA 57.482 36.364 0.00 0.00 0.00 5.10
822 840 5.398169 TGTAATCATCCAATGTTGTTTCGC 58.602 37.500 0.00 0.00 0.00 4.70
823 841 6.029607 CCTGTAATCATCCAATGTTGTTTCG 58.970 40.000 0.00 0.00 0.00 3.46
824 842 7.029563 GTCCTGTAATCATCCAATGTTGTTTC 58.970 38.462 0.00 0.00 0.00 2.78
827 845 5.649395 CAGTCCTGTAATCATCCAATGTTGT 59.351 40.000 0.00 0.00 0.00 3.32
828 846 5.649395 ACAGTCCTGTAATCATCCAATGTTG 59.351 40.000 0.00 0.00 42.90 3.33
829 847 5.649395 CACAGTCCTGTAATCATCCAATGTT 59.351 40.000 0.00 0.00 42.83 2.71
832 850 4.228210 ACCACAGTCCTGTAATCATCCAAT 59.772 41.667 0.00 0.00 42.83 3.16
833 851 3.587061 ACCACAGTCCTGTAATCATCCAA 59.413 43.478 0.00 0.00 42.83 3.53
834 852 3.181329 ACCACAGTCCTGTAATCATCCA 58.819 45.455 0.00 0.00 42.83 3.41
835 853 3.914426 ACCACAGTCCTGTAATCATCC 57.086 47.619 0.00 0.00 42.83 3.51
836 854 4.694339 GGTACCACAGTCCTGTAATCATC 58.306 47.826 7.15 0.00 42.83 2.92
852 870 5.861869 CTAGCAGGCTAGGAAGGGTACCA 62.862 56.522 18.40 0.00 46.24 3.25
853 871 3.344892 CTAGCAGGCTAGGAAGGGTACC 61.345 59.091 18.40 2.17 45.14 3.34
854 872 1.964933 CTAGCAGGCTAGGAAGGGTAC 59.035 57.143 18.40 0.00 41.58 3.34
855 873 1.758123 GCTAGCAGGCTAGGAAGGGTA 60.758 57.143 25.09 0.00 44.48 3.69
857 875 1.751563 GCTAGCAGGCTAGGAAGGG 59.248 63.158 25.09 4.84 44.48 3.95
858 876 1.050988 TGGCTAGCAGGCTAGGAAGG 61.051 60.000 25.09 5.48 44.48 3.46
860 878 0.325671 ACTGGCTAGCAGGCTAGGAA 60.326 55.000 25.09 0.00 44.48 3.36
861 879 0.556258 TACTGGCTAGCAGGCTAGGA 59.444 55.000 25.09 7.09 44.48 2.94
862 880 0.965439 CTACTGGCTAGCAGGCTAGG 59.035 60.000 25.09 13.81 44.48 3.02
864 882 2.431023 GCTACTGGCTAGCAGGCTA 58.569 57.895 18.24 0.49 46.56 3.93
865 883 3.225235 GCTACTGGCTAGCAGGCT 58.775 61.111 18.24 0.00 46.56 4.58
870 888 1.227002 GTCGTGGCTACTGGCTAGC 60.227 63.158 6.04 6.04 46.60 3.42
913 942 0.109532 TTGTTCTGTGCCGGGAATGA 59.890 50.000 2.18 0.00 0.00 2.57
950 994 4.077300 TGTGATGAGCTCTTTGTGTTCT 57.923 40.909 16.19 0.00 0.00 3.01
1104 3035 6.401047 AGGGTATATTATATGCGCGTACAT 57.599 37.500 12.39 9.71 0.00 2.29
1141 3081 5.014544 TGGAGATGAGTTGGAGGAAGAAAAT 59.985 40.000 0.00 0.00 0.00 1.82
1142 3082 4.350816 TGGAGATGAGTTGGAGGAAGAAAA 59.649 41.667 0.00 0.00 0.00 2.29
1143 3083 3.909995 TGGAGATGAGTTGGAGGAAGAAA 59.090 43.478 0.00 0.00 0.00 2.52
1144 3084 3.520696 TGGAGATGAGTTGGAGGAAGAA 58.479 45.455 0.00 0.00 0.00 2.52
1314 3286 4.680237 CGTGAGCGACCCCAGCAA 62.680 66.667 0.00 0.00 41.33 3.91
1400 3372 4.383861 CAGCAGTCGCAGCAGGGA 62.384 66.667 0.00 0.00 42.27 4.20
1626 3610 1.146041 AAGCACCAGCAACACTCGA 59.854 52.632 0.00 0.00 45.49 4.04
1628 3612 1.103398 ACCAAGCACCAGCAACACTC 61.103 55.000 0.00 0.00 45.49 3.51
1635 3619 3.865164 GCAATAATTTACCAAGCACCAGC 59.135 43.478 0.00 0.00 42.56 4.85
1659 3644 8.734386 ACAAAGCTACAAGTACGTACTATAGTT 58.266 33.333 29.52 25.49 34.99 2.24
1713 3698 8.946085 CATGTACAATACAACAACATACTCCTT 58.054 33.333 0.00 0.00 42.76 3.36
1727 3712 6.648192 TCATCACATCACCATGTACAATACA 58.352 36.000 0.00 0.00 41.69 2.29
1730 3715 5.748402 ACTCATCACATCACCATGTACAAT 58.252 37.500 0.00 0.00 41.69 2.71
1775 3770 1.268899 GCATCATGGCATTACTCCTGC 59.731 52.381 0.00 0.00 38.93 4.85
1790 3785 7.218228 AGAGTACAATGAACAAAATGCATCA 57.782 32.000 0.00 0.00 0.00 3.07
1842 3845 9.726034 GTTTGCTCGATTTTATTTGTACAAATG 57.274 29.630 33.94 20.72 40.83 2.32
1916 3919 8.226448 CGCATTTTGATATTTTTGGCTAACAAA 58.774 29.630 0.00 0.00 46.82 2.83
1917 3920 7.386299 ACGCATTTTGATATTTTTGGCTAACAA 59.614 29.630 0.00 0.00 37.28 2.83
1918 3921 6.870965 ACGCATTTTGATATTTTTGGCTAACA 59.129 30.769 0.00 0.00 0.00 2.41
1919 3922 7.289587 ACGCATTTTGATATTTTTGGCTAAC 57.710 32.000 0.00 0.00 0.00 2.34
1921 3924 9.891828 CTATACGCATTTTGATATTTTTGGCTA 57.108 29.630 0.00 0.00 0.00 3.93
1922 3925 8.413229 ACTATACGCATTTTGATATTTTTGGCT 58.587 29.630 0.00 0.00 0.00 4.75
1923 3926 8.479280 CACTATACGCATTTTGATATTTTTGGC 58.521 33.333 0.00 0.00 0.00 4.52
1924 3927 8.479280 GCACTATACGCATTTTGATATTTTTGG 58.521 33.333 0.00 0.00 0.00 3.28
1925 3928 8.479280 GGCACTATACGCATTTTGATATTTTTG 58.521 33.333 0.00 0.00 0.00 2.44
1926 3929 8.413229 AGGCACTATACGCATTTTGATATTTTT 58.587 29.630 0.00 0.00 36.02 1.94
1927 3930 7.940850 AGGCACTATACGCATTTTGATATTTT 58.059 30.769 0.00 0.00 36.02 1.82
1928 3931 7.510549 AGGCACTATACGCATTTTGATATTT 57.489 32.000 0.00 0.00 36.02 1.40
1929 3932 7.510549 AAGGCACTATACGCATTTTGATATT 57.489 32.000 0.00 0.00 38.49 1.28
1930 3933 7.013274 ACAAAGGCACTATACGCATTTTGATAT 59.987 33.333 16.93 0.00 40.14 1.63
1931 3934 6.317642 ACAAAGGCACTATACGCATTTTGATA 59.682 34.615 16.93 0.00 40.14 2.15
1932 3935 5.125417 ACAAAGGCACTATACGCATTTTGAT 59.875 36.000 16.93 6.68 40.14 2.57
1933 3936 4.457603 ACAAAGGCACTATACGCATTTTGA 59.542 37.500 16.93 0.00 40.14 2.69
1934 3937 4.732784 ACAAAGGCACTATACGCATTTTG 58.267 39.130 12.39 12.39 40.14 2.44
1935 3938 5.385509 AACAAAGGCACTATACGCATTTT 57.614 34.783 0.00 0.00 40.14 1.82
1936 3939 6.503589 TTAACAAAGGCACTATACGCATTT 57.496 33.333 0.00 0.00 43.50 2.32
1937 3940 6.693315 ATTAACAAAGGCACTATACGCATT 57.307 33.333 0.00 0.00 38.49 3.56
1938 3941 6.693315 AATTAACAAAGGCACTATACGCAT 57.307 33.333 0.00 0.00 38.49 4.73
1939 3942 6.819649 AGTAATTAACAAAGGCACTATACGCA 59.180 34.615 0.00 0.00 38.49 5.24
1940 3943 7.242914 AGTAATTAACAAAGGCACTATACGC 57.757 36.000 0.00 0.00 38.49 4.42
1941 3944 8.975439 CCTAGTAATTAACAAAGGCACTATACG 58.025 37.037 0.00 0.00 38.49 3.06
1944 3947 9.969001 TTTCCTAGTAATTAACAAAGGCACTAT 57.031 29.630 0.00 0.00 38.49 2.12
1945 3948 9.969001 ATTTCCTAGTAATTAACAAAGGCACTA 57.031 29.630 0.00 0.00 38.49 2.74
1947 3950 8.520351 ACATTTCCTAGTAATTAACAAAGGCAC 58.480 33.333 0.00 0.00 34.84 5.01
1948 3951 8.519526 CACATTTCCTAGTAATTAACAAAGGCA 58.480 33.333 0.00 0.00 34.84 4.75
1949 3952 8.520351 ACACATTTCCTAGTAATTAACAAAGGC 58.480 33.333 0.00 0.00 34.84 4.35
1953 3956 9.709495 ACGTACACATTTCCTAGTAATTAACAA 57.291 29.630 0.00 0.00 0.00 2.83
1954 3957 9.142515 CACGTACACATTTCCTAGTAATTAACA 57.857 33.333 0.00 0.00 0.00 2.41
1955 3958 9.143631 ACACGTACACATTTCCTAGTAATTAAC 57.856 33.333 0.00 0.00 0.00 2.01
1958 3961 9.880157 ATTACACGTACACATTTCCTAGTAATT 57.120 29.630 0.00 0.00 0.00 1.40
1960 3963 9.787532 GTATTACACGTACACATTTCCTAGTAA 57.212 33.333 0.00 0.00 0.00 2.24
1961 3964 8.405531 GGTATTACACGTACACATTTCCTAGTA 58.594 37.037 0.00 0.00 0.00 1.82
1962 3965 7.260603 GGTATTACACGTACACATTTCCTAGT 58.739 38.462 0.00 0.00 0.00 2.57
1963 3966 6.698766 GGGTATTACACGTACACATTTCCTAG 59.301 42.308 0.00 0.00 0.00 3.02
1964 3967 6.572519 GGGTATTACACGTACACATTTCCTA 58.427 40.000 0.00 0.00 0.00 2.94
1965 3968 5.422145 GGGTATTACACGTACACATTTCCT 58.578 41.667 0.00 0.00 0.00 3.36
1966 3969 4.268405 CGGGTATTACACGTACACATTTCC 59.732 45.833 10.32 0.00 40.74 3.13
1967 3970 5.379757 CGGGTATTACACGTACACATTTC 57.620 43.478 10.32 0.00 40.74 2.17
1978 3981 4.689345 GCCTGATATGAACGGGTATTACAC 59.311 45.833 0.00 0.00 36.29 2.90
1979 3982 4.345547 TGCCTGATATGAACGGGTATTACA 59.654 41.667 0.00 0.00 36.29 2.41
1980 3983 4.890088 TGCCTGATATGAACGGGTATTAC 58.110 43.478 0.00 0.00 36.29 1.89
1981 3984 5.755409 ATGCCTGATATGAACGGGTATTA 57.245 39.130 0.00 0.00 36.07 0.98
1982 3985 4.640771 ATGCCTGATATGAACGGGTATT 57.359 40.909 0.00 0.00 36.07 1.89
1983 3986 5.755409 TTATGCCTGATATGAACGGGTAT 57.245 39.130 0.00 0.00 40.91 2.73
1984 3987 5.071250 ACTTTATGCCTGATATGAACGGGTA 59.929 40.000 0.00 0.00 36.29 3.69
1985 3988 4.141482 ACTTTATGCCTGATATGAACGGGT 60.141 41.667 0.00 0.00 36.29 5.28
1986 3989 4.389374 ACTTTATGCCTGATATGAACGGG 58.611 43.478 0.00 0.00 36.91 5.28
1987 3990 5.527214 TGAACTTTATGCCTGATATGAACGG 59.473 40.000 0.00 0.00 0.00 4.44
1988 3991 6.603237 TGAACTTTATGCCTGATATGAACG 57.397 37.500 0.00 0.00 0.00 3.95
1989 3992 7.380602 GCAATGAACTTTATGCCTGATATGAAC 59.619 37.037 0.00 0.00 32.73 3.18
1990 3993 7.068470 TGCAATGAACTTTATGCCTGATATGAA 59.932 33.333 0.00 0.00 38.00 2.57
1991 3994 6.546772 TGCAATGAACTTTATGCCTGATATGA 59.453 34.615 0.00 0.00 38.00 2.15
1992 3995 6.639686 GTGCAATGAACTTTATGCCTGATATG 59.360 38.462 0.00 0.00 38.00 1.78
1993 3996 6.321945 TGTGCAATGAACTTTATGCCTGATAT 59.678 34.615 0.00 0.00 38.00 1.63
1994 3997 5.651576 TGTGCAATGAACTTTATGCCTGATA 59.348 36.000 0.00 0.00 38.00 2.15
1995 3998 4.463539 TGTGCAATGAACTTTATGCCTGAT 59.536 37.500 0.00 0.00 38.00 2.90
1996 3999 3.825585 TGTGCAATGAACTTTATGCCTGA 59.174 39.130 0.00 0.00 38.00 3.86
1997 4000 4.177165 TGTGCAATGAACTTTATGCCTG 57.823 40.909 0.00 0.00 38.00 4.85
1998 4001 5.887598 TCTATGTGCAATGAACTTTATGCCT 59.112 36.000 0.00 0.00 38.00 4.75
1999 4002 6.135290 TCTATGTGCAATGAACTTTATGCC 57.865 37.500 0.00 0.00 38.00 4.40
2000 4003 7.198390 ACATCTATGTGCAATGAACTTTATGC 58.802 34.615 2.39 0.00 40.03 3.14
2001 4004 8.400186 TGACATCTATGTGCAATGAACTTTATG 58.600 33.333 0.00 0.00 41.95 1.90
2002 4005 8.510243 TGACATCTATGTGCAATGAACTTTAT 57.490 30.769 0.00 0.00 41.95 1.40
2003 4006 7.066163 CCTGACATCTATGTGCAATGAACTTTA 59.934 37.037 0.00 0.00 41.95 1.85
2004 4007 6.127814 CCTGACATCTATGTGCAATGAACTTT 60.128 38.462 0.00 0.00 41.95 2.66
2005 4008 5.356190 CCTGACATCTATGTGCAATGAACTT 59.644 40.000 0.00 0.00 41.95 2.66
2006 4009 4.880120 CCTGACATCTATGTGCAATGAACT 59.120 41.667 0.00 0.00 41.95 3.01
2007 4010 4.497006 GCCTGACATCTATGTGCAATGAAC 60.497 45.833 0.00 0.00 41.95 3.18
2008 4011 3.628942 GCCTGACATCTATGTGCAATGAA 59.371 43.478 0.00 0.00 41.95 2.57
2009 4012 3.208594 GCCTGACATCTATGTGCAATGA 58.791 45.455 0.00 0.00 41.95 2.57
2010 4013 2.946990 TGCCTGACATCTATGTGCAATG 59.053 45.455 0.00 0.00 41.95 2.82
2011 4014 3.118149 TCTGCCTGACATCTATGTGCAAT 60.118 43.478 0.00 0.00 41.95 3.56
2012 4015 2.236893 TCTGCCTGACATCTATGTGCAA 59.763 45.455 0.00 0.00 41.95 4.08
2013 4016 1.832998 TCTGCCTGACATCTATGTGCA 59.167 47.619 0.00 3.65 41.95 4.57
2014 4017 2.609427 TCTGCCTGACATCTATGTGC 57.391 50.000 0.00 0.00 41.95 4.57
2015 4018 6.094464 TCAATTTTCTGCCTGACATCTATGTG 59.906 38.462 0.00 0.00 41.95 3.21
2016 4019 6.182627 TCAATTTTCTGCCTGACATCTATGT 58.817 36.000 0.00 0.00 45.16 2.29
2017 4020 6.688637 TCAATTTTCTGCCTGACATCTATG 57.311 37.500 0.00 0.00 0.00 2.23
2018 4021 7.683704 GCAATCAATTTTCTGCCTGACATCTAT 60.684 37.037 0.00 0.00 0.00 1.98
2019 4022 6.405065 GCAATCAATTTTCTGCCTGACATCTA 60.405 38.462 0.00 0.00 0.00 1.98
2020 4023 5.623824 GCAATCAATTTTCTGCCTGACATCT 60.624 40.000 0.00 0.00 0.00 2.90
2021 4024 4.565564 GCAATCAATTTTCTGCCTGACATC 59.434 41.667 0.00 0.00 0.00 3.06
2022 4025 4.501071 GCAATCAATTTTCTGCCTGACAT 58.499 39.130 0.00 0.00 0.00 3.06
2023 4026 3.612241 CGCAATCAATTTTCTGCCTGACA 60.612 43.478 0.00 0.00 0.00 3.58
2024 4027 2.919229 CGCAATCAATTTTCTGCCTGAC 59.081 45.455 0.00 0.00 0.00 3.51
2025 4028 2.094597 CCGCAATCAATTTTCTGCCTGA 60.095 45.455 0.00 0.00 0.00 3.86
2026 4029 2.094597 TCCGCAATCAATTTTCTGCCTG 60.095 45.455 0.00 0.00 0.00 4.85
2027 4030 2.165030 CTCCGCAATCAATTTTCTGCCT 59.835 45.455 0.00 0.00 0.00 4.75
2028 4031 2.094545 ACTCCGCAATCAATTTTCTGCC 60.095 45.455 0.00 0.00 0.00 4.85
2029 4032 3.221964 ACTCCGCAATCAATTTTCTGC 57.778 42.857 0.00 0.00 0.00 4.26
2030 4033 4.635765 TCCTACTCCGCAATCAATTTTCTG 59.364 41.667 0.00 0.00 0.00 3.02
2031 4034 4.843728 TCCTACTCCGCAATCAATTTTCT 58.156 39.130 0.00 0.00 0.00 2.52
2032 4035 5.757850 ATCCTACTCCGCAATCAATTTTC 57.242 39.130 0.00 0.00 0.00 2.29
2033 4036 5.531287 GGTATCCTACTCCGCAATCAATTTT 59.469 40.000 0.00 0.00 0.00 1.82
2034 4037 5.063880 GGTATCCTACTCCGCAATCAATTT 58.936 41.667 0.00 0.00 0.00 1.82
2035 4038 4.102524 TGGTATCCTACTCCGCAATCAATT 59.897 41.667 0.00 0.00 0.00 2.32
2036 4039 3.646162 TGGTATCCTACTCCGCAATCAAT 59.354 43.478 0.00 0.00 0.00 2.57
2037 4040 3.035363 TGGTATCCTACTCCGCAATCAA 58.965 45.455 0.00 0.00 0.00 2.57
2038 4041 2.673258 TGGTATCCTACTCCGCAATCA 58.327 47.619 0.00 0.00 0.00 2.57
2039 4042 3.746045 TTGGTATCCTACTCCGCAATC 57.254 47.619 0.00 0.00 0.00 2.67
2040 4043 4.706842 AATTGGTATCCTACTCCGCAAT 57.293 40.909 0.00 0.00 0.00 3.56
2041 4044 4.500205 CGTAATTGGTATCCTACTCCGCAA 60.500 45.833 0.00 0.00 0.00 4.85
2042 4045 3.005050 CGTAATTGGTATCCTACTCCGCA 59.995 47.826 0.00 0.00 0.00 5.69
2043 4046 3.572584 CGTAATTGGTATCCTACTCCGC 58.427 50.000 0.00 0.00 0.00 5.54
2044 4047 3.572584 GCGTAATTGGTATCCTACTCCG 58.427 50.000 0.00 0.00 0.00 4.63
2045 4048 3.005155 ACGCGTAATTGGTATCCTACTCC 59.995 47.826 11.67 0.00 0.00 3.85
2046 4049 4.234530 ACGCGTAATTGGTATCCTACTC 57.765 45.455 11.67 0.00 0.00 2.59
2047 4050 4.660789 AACGCGTAATTGGTATCCTACT 57.339 40.909 14.46 0.00 0.00 2.57
2048 4051 7.412137 AATTAACGCGTAATTGGTATCCTAC 57.588 36.000 14.46 0.00 40.27 3.18
2049 4052 8.140628 TGTAATTAACGCGTAATTGGTATCCTA 58.859 33.333 24.26 6.02 41.55 2.94
2050 4053 6.985645 TGTAATTAACGCGTAATTGGTATCCT 59.014 34.615 24.26 6.85 41.55 3.24
2051 4054 7.176285 TGTAATTAACGCGTAATTGGTATCC 57.824 36.000 24.26 12.64 41.55 2.59
2052 4055 7.742963 CCATGTAATTAACGCGTAATTGGTATC 59.257 37.037 24.26 14.92 41.55 2.24
2053 4056 7.441760 TCCATGTAATTAACGCGTAATTGGTAT 59.558 33.333 24.26 16.71 41.55 2.73
2054 4057 6.760298 TCCATGTAATTAACGCGTAATTGGTA 59.240 34.615 24.26 15.78 41.55 3.25
2055 4058 5.585445 TCCATGTAATTAACGCGTAATTGGT 59.415 36.000 24.26 9.70 41.55 3.67
2056 4059 6.050454 TCCATGTAATTAACGCGTAATTGG 57.950 37.500 24.26 19.96 41.55 3.16
2057 4060 6.515002 CGATCCATGTAATTAACGCGTAATTG 59.485 38.462 24.26 14.77 41.55 2.32
2058 4061 6.586751 CGATCCATGTAATTAACGCGTAATT 58.413 36.000 14.46 19.49 43.44 1.40
2059 4062 5.389098 GCGATCCATGTAATTAACGCGTAAT 60.389 40.000 14.46 10.09 35.98 1.89
2060 4063 4.084952 GCGATCCATGTAATTAACGCGTAA 60.085 41.667 14.46 7.95 35.98 3.18
2061 4064 3.426191 GCGATCCATGTAATTAACGCGTA 59.574 43.478 14.46 0.00 35.98 4.42
2062 4065 2.220133 GCGATCCATGTAATTAACGCGT 59.780 45.455 5.58 5.58 35.98 6.01
2063 4066 2.411031 GGCGATCCATGTAATTAACGCG 60.411 50.000 3.53 3.53 44.49 6.01
2064 4067 2.095919 GGGCGATCCATGTAATTAACGC 60.096 50.000 0.00 0.00 43.19 4.84
2065 4068 3.135225 TGGGCGATCCATGTAATTAACG 58.865 45.455 0.00 0.00 41.46 3.18
2077 4080 3.412386 ACTTAGCAAATATGGGCGATCC 58.588 45.455 0.00 0.00 34.54 3.36
2078 4081 6.743575 ATAACTTAGCAAATATGGGCGATC 57.256 37.500 0.00 0.00 34.54 3.69
2079 4082 8.630054 TTAATAACTTAGCAAATATGGGCGAT 57.370 30.769 0.00 0.00 34.54 4.58
2080 4083 8.630054 ATTAATAACTTAGCAAATATGGGCGA 57.370 30.769 0.00 0.00 34.54 5.54
2081 4084 9.128107 CAATTAATAACTTAGCAAATATGGGCG 57.872 33.333 0.00 0.00 34.54 6.13
2082 4085 8.925700 GCAATTAATAACTTAGCAAATATGGGC 58.074 33.333 0.00 0.00 0.00 5.36
2083 4086 9.979578 TGCAATTAATAACTTAGCAAATATGGG 57.020 29.630 0.00 0.00 0.00 4.00
2097 4100 9.173939 GCTCAACATGACTATGCAATTAATAAC 57.826 33.333 0.00 0.00 37.85 1.89
2098 4101 8.901793 TGCTCAACATGACTATGCAATTAATAA 58.098 29.630 0.00 0.00 37.85 1.40
2099 4102 8.344831 GTGCTCAACATGACTATGCAATTAATA 58.655 33.333 0.00 0.00 37.85 0.98
2100 4103 7.148035 TGTGCTCAACATGACTATGCAATTAAT 60.148 33.333 0.00 0.00 37.85 1.40
2101 4104 6.150809 TGTGCTCAACATGACTATGCAATTAA 59.849 34.615 0.00 0.00 37.85 1.40
2102 4105 5.647225 TGTGCTCAACATGACTATGCAATTA 59.353 36.000 0.00 0.00 37.85 1.40
2103 4106 4.460034 TGTGCTCAACATGACTATGCAATT 59.540 37.500 0.00 0.00 37.85 2.32
2104 4107 4.011698 TGTGCTCAACATGACTATGCAAT 58.988 39.130 0.00 0.00 37.85 3.56
2105 4108 3.410508 TGTGCTCAACATGACTATGCAA 58.589 40.909 0.00 0.00 37.85 4.08
2106 4109 3.056588 TGTGCTCAACATGACTATGCA 57.943 42.857 0.00 0.00 37.85 3.96
2116 4119 1.618487 TCAATGGCATGTGCTCAACA 58.382 45.000 0.00 0.00 44.79 3.33
2117 4120 2.602878 CTTCAATGGCATGTGCTCAAC 58.397 47.619 0.00 0.00 41.70 3.18
2118 4121 1.067425 GCTTCAATGGCATGTGCTCAA 60.067 47.619 0.00 0.00 41.70 3.02
2119 4122 0.528924 GCTTCAATGGCATGTGCTCA 59.471 50.000 0.00 2.11 41.70 4.26
2120 4123 0.528924 TGCTTCAATGGCATGTGCTC 59.471 50.000 0.00 0.00 41.70 4.26
2121 4124 0.970640 TTGCTTCAATGGCATGTGCT 59.029 45.000 0.00 0.00 39.54 4.40
2122 4125 2.018542 ATTGCTTCAATGGCATGTGC 57.981 45.000 0.00 4.08 39.54 4.57
2123 4126 6.364976 CACATATATTGCTTCAATGGCATGTG 59.635 38.462 0.00 17.84 39.32 3.21
2124 4127 6.452242 CACATATATTGCTTCAATGGCATGT 58.548 36.000 0.00 6.16 39.54 3.21
2125 4128 5.867174 CCACATATATTGCTTCAATGGCATG 59.133 40.000 0.00 0.00 39.54 4.06
2126 4129 5.541101 ACCACATATATTGCTTCAATGGCAT 59.459 36.000 0.00 0.00 39.54 4.40
2127 4130 4.894705 ACCACATATATTGCTTCAATGGCA 59.105 37.500 0.00 0.00 35.54 4.92
2128 4131 5.458041 ACCACATATATTGCTTCAATGGC 57.542 39.130 2.57 0.00 35.54 4.40
2129 4132 7.490840 TCAAACCACATATATTGCTTCAATGG 58.509 34.615 2.57 0.00 35.54 3.16
2130 4133 9.537192 AATCAAACCACATATATTGCTTCAATG 57.463 29.630 2.57 0.00 35.54 2.82
2131 4134 9.537192 CAATCAAACCACATATATTGCTTCAAT 57.463 29.630 0.00 0.00 37.80 2.57
2132 4135 8.747471 TCAATCAAACCACATATATTGCTTCAA 58.253 29.630 0.00 0.00 0.00 2.69
2133 4136 8.190122 GTCAATCAAACCACATATATTGCTTCA 58.810 33.333 0.00 0.00 0.00 3.02
2134 4137 8.190122 TGTCAATCAAACCACATATATTGCTTC 58.810 33.333 0.00 0.00 0.00 3.86
2135 4138 7.975616 GTGTCAATCAAACCACATATATTGCTT 59.024 33.333 0.00 0.00 0.00 3.91
2136 4139 7.340232 AGTGTCAATCAAACCACATATATTGCT 59.660 33.333 0.00 0.00 0.00 3.91
2137 4140 7.433131 CAGTGTCAATCAAACCACATATATTGC 59.567 37.037 0.00 0.00 0.00 3.56
2138 4141 8.461222 ACAGTGTCAATCAAACCACATATATTG 58.539 33.333 0.00 0.00 0.00 1.90
2139 4142 8.579850 ACAGTGTCAATCAAACCACATATATT 57.420 30.769 0.00 0.00 0.00 1.28
2140 4143 8.579850 AACAGTGTCAATCAAACCACATATAT 57.420 30.769 0.00 0.00 0.00 0.86
2141 4144 7.994425 AACAGTGTCAATCAAACCACATATA 57.006 32.000 0.00 0.00 0.00 0.86
2142 4145 6.899393 AACAGTGTCAATCAAACCACATAT 57.101 33.333 0.00 0.00 0.00 1.78
2143 4146 6.319911 TCAAACAGTGTCAATCAAACCACATA 59.680 34.615 0.00 0.00 0.00 2.29
2144 4147 5.126869 TCAAACAGTGTCAATCAAACCACAT 59.873 36.000 0.00 0.00 0.00 3.21
2145 4148 4.460731 TCAAACAGTGTCAATCAAACCACA 59.539 37.500 0.00 0.00 0.00 4.17
2146 4149 4.992688 TCAAACAGTGTCAATCAAACCAC 58.007 39.130 0.00 0.00 0.00 4.16
2147 4150 5.359292 TCATCAAACAGTGTCAATCAAACCA 59.641 36.000 0.00 0.00 0.00 3.67
2148 4151 5.687285 GTCATCAAACAGTGTCAATCAAACC 59.313 40.000 0.00 0.00 0.00 3.27
2149 4152 6.415867 CAGTCATCAAACAGTGTCAATCAAAC 59.584 38.462 0.00 0.00 0.00 2.93
2150 4153 6.318396 TCAGTCATCAAACAGTGTCAATCAAA 59.682 34.615 0.00 0.00 0.00 2.69
2151 4154 5.821995 TCAGTCATCAAACAGTGTCAATCAA 59.178 36.000 0.00 0.00 0.00 2.57
2152 4155 5.367302 TCAGTCATCAAACAGTGTCAATCA 58.633 37.500 0.00 0.00 0.00 2.57
2153 4156 5.698089 TCTCAGTCATCAAACAGTGTCAATC 59.302 40.000 0.00 0.00 0.00 2.67
2154 4157 5.614308 TCTCAGTCATCAAACAGTGTCAAT 58.386 37.500 0.00 0.00 0.00 2.57
2155 4158 5.022282 TCTCAGTCATCAAACAGTGTCAA 57.978 39.130 0.00 0.00 0.00 3.18
2156 4159 4.100035 ACTCTCAGTCATCAAACAGTGTCA 59.900 41.667 0.00 0.00 0.00 3.58
2157 4160 4.626042 ACTCTCAGTCATCAAACAGTGTC 58.374 43.478 0.00 0.00 0.00 3.67
2158 4161 4.679373 ACTCTCAGTCATCAAACAGTGT 57.321 40.909 0.00 0.00 0.00 3.55
2159 4162 4.813161 ACAACTCTCAGTCATCAAACAGTG 59.187 41.667 0.00 0.00 0.00 3.66
2160 4163 5.028549 ACAACTCTCAGTCATCAAACAGT 57.971 39.130 0.00 0.00 0.00 3.55
2161 4164 5.277683 CCAACAACTCTCAGTCATCAAACAG 60.278 44.000 0.00 0.00 0.00 3.16
2162 4165 4.576053 CCAACAACTCTCAGTCATCAAACA 59.424 41.667 0.00 0.00 0.00 2.83
2163 4166 4.816385 TCCAACAACTCTCAGTCATCAAAC 59.184 41.667 0.00 0.00 0.00 2.93
2164 4167 5.034852 TCCAACAACTCTCAGTCATCAAA 57.965 39.130 0.00 0.00 0.00 2.69
2165 4168 4.687901 TCCAACAACTCTCAGTCATCAA 57.312 40.909 0.00 0.00 0.00 2.57
2166 4169 4.529769 AGATCCAACAACTCTCAGTCATCA 59.470 41.667 0.00 0.00 0.00 3.07
2167 4170 5.083533 AGATCCAACAACTCTCAGTCATC 57.916 43.478 0.00 0.00 0.00 2.92
2168 4171 5.719085 AGTAGATCCAACAACTCTCAGTCAT 59.281 40.000 0.00 0.00 0.00 3.06
2169 4172 5.080337 AGTAGATCCAACAACTCTCAGTCA 58.920 41.667 0.00 0.00 0.00 3.41
2170 4173 5.652994 AGTAGATCCAACAACTCTCAGTC 57.347 43.478 0.00 0.00 0.00 3.51
2171 4174 6.249951 AGTAGTAGATCCAACAACTCTCAGT 58.750 40.000 0.00 0.00 0.00 3.41
2172 4175 6.767524 AGTAGTAGATCCAACAACTCTCAG 57.232 41.667 0.00 0.00 0.00 3.35
2173 4176 7.378966 CAAAGTAGTAGATCCAACAACTCTCA 58.621 38.462 0.00 0.00 0.00 3.27
2174 4177 6.814146 CCAAAGTAGTAGATCCAACAACTCTC 59.186 42.308 0.00 0.00 0.00 3.20
2175 4178 6.497259 TCCAAAGTAGTAGATCCAACAACTCT 59.503 38.462 0.00 0.00 0.00 3.24
2176 4179 6.698380 TCCAAAGTAGTAGATCCAACAACTC 58.302 40.000 0.00 0.00 0.00 3.01
2177 4180 6.681729 TCCAAAGTAGTAGATCCAACAACT 57.318 37.500 0.00 0.00 0.00 3.16
2178 4181 7.541122 GATCCAAAGTAGTAGATCCAACAAC 57.459 40.000 0.00 0.00 30.97 3.32
2235 4238 9.719355 ACTTTGAAAGGTAAAAGTGTTGAAAAT 57.281 25.926 10.02 0.00 43.26 1.82
2236 4239 9.198837 GACTTTGAAAGGTAAAAGTGTTGAAAA 57.801 29.630 10.02 0.00 44.53 2.29
2237 4240 8.361139 TGACTTTGAAAGGTAAAAGTGTTGAAA 58.639 29.630 10.02 0.00 44.53 2.69
2238 4241 7.887381 TGACTTTGAAAGGTAAAAGTGTTGAA 58.113 30.769 10.02 0.00 44.53 2.69
2239 4242 7.455641 TGACTTTGAAAGGTAAAAGTGTTGA 57.544 32.000 10.02 0.00 44.53 3.18
2240 4243 8.527567 TTTGACTTTGAAAGGTAAAAGTGTTG 57.472 30.769 10.02 0.00 44.53 3.33
2241 4244 9.366216 GATTTGACTTTGAAAGGTAAAAGTGTT 57.634 29.630 10.02 0.00 44.53 3.32
2242 4245 8.527810 TGATTTGACTTTGAAAGGTAAAAGTGT 58.472 29.630 10.02 0.00 44.53 3.55
2243 4246 8.925161 TGATTTGACTTTGAAAGGTAAAAGTG 57.075 30.769 10.02 0.00 44.53 3.16
2244 4247 9.533253 CATGATTTGACTTTGAAAGGTAAAAGT 57.467 29.630 10.02 0.66 46.56 2.66
2245 4248 8.981647 CCATGATTTGACTTTGAAAGGTAAAAG 58.018 33.333 10.02 0.00 38.95 2.27
2246 4249 8.700051 TCCATGATTTGACTTTGAAAGGTAAAA 58.300 29.630 10.02 7.06 0.00 1.52
2247 4250 8.243961 TCCATGATTTGACTTTGAAAGGTAAA 57.756 30.769 10.02 9.99 0.00 2.01
2248 4251 7.831691 TCCATGATTTGACTTTGAAAGGTAA 57.168 32.000 10.02 1.24 0.00 2.85
2249 4252 8.956426 GTATCCATGATTTGACTTTGAAAGGTA 58.044 33.333 10.02 0.00 0.00 3.08
2250 4253 6.923199 ATCCATGATTTGACTTTGAAAGGT 57.077 33.333 10.02 0.00 0.00 3.50
2251 4254 7.123247 AGGTATCCATGATTTGACTTTGAAAGG 59.877 37.037 10.02 0.00 0.00 3.11
2252 4255 8.059798 AGGTATCCATGATTTGACTTTGAAAG 57.940 34.615 2.89 2.89 0.00 2.62
2253 4256 9.527157 TTAGGTATCCATGATTTGACTTTGAAA 57.473 29.630 0.00 0.00 0.00 2.69
2254 4257 9.699410 ATTAGGTATCCATGATTTGACTTTGAA 57.301 29.630 0.00 0.00 0.00 2.69
2255 4258 9.342308 GATTAGGTATCCATGATTTGACTTTGA 57.658 33.333 0.00 0.00 0.00 2.69
2256 4259 9.347240 AGATTAGGTATCCATGATTTGACTTTG 57.653 33.333 0.00 0.00 33.45 2.77
2257 4260 9.927081 AAGATTAGGTATCCATGATTTGACTTT 57.073 29.630 0.00 0.00 33.45 2.66
2313 4316 9.899661 TGCTCTTATATACCATAAACAACAAGT 57.100 29.630 0.00 0.00 0.00 3.16
2324 4327 9.290988 CCGTCTATAGATGCTCTTATATACCAT 57.709 37.037 15.44 0.00 0.00 3.55
2325 4328 8.272889 ACCGTCTATAGATGCTCTTATATACCA 58.727 37.037 15.44 0.00 0.00 3.25
2326 4329 8.680039 ACCGTCTATAGATGCTCTTATATACC 57.320 38.462 15.44 0.00 0.00 2.73
2327 4330 9.550406 AGACCGTCTATAGATGCTCTTATATAC 57.450 37.037 15.44 0.00 0.00 1.47
2328 4331 9.767228 GAGACCGTCTATAGATGCTCTTATATA 57.233 37.037 17.25 0.00 28.90 0.86
2329 4332 7.717875 GGAGACCGTCTATAGATGCTCTTATAT 59.282 40.741 17.25 0.17 28.90 0.86
2330 4333 7.049133 GGAGACCGTCTATAGATGCTCTTATA 58.951 42.308 17.25 0.00 28.90 0.98
2331 4334 5.883673 GGAGACCGTCTATAGATGCTCTTAT 59.116 44.000 17.25 0.77 28.90 1.73
2332 4335 5.013287 AGGAGACCGTCTATAGATGCTCTTA 59.987 44.000 17.25 0.00 28.90 2.10
2333 4336 4.076394 GGAGACCGTCTATAGATGCTCTT 58.924 47.826 17.25 5.52 28.90 2.85
2346 4349 1.192803 AGGGGTTTGAGGAGACCGTC 61.193 60.000 0.00 0.00 36.78 4.79
2347 4350 0.767060 AAGGGGTTTGAGGAGACCGT 60.767 55.000 0.00 0.00 36.78 4.83
2348 4351 0.036294 GAAGGGGTTTGAGGAGACCG 60.036 60.000 0.00 0.00 36.78 4.79
2354 4357 2.369394 GCATACAGAAGGGGTTTGAGG 58.631 52.381 0.00 0.00 0.00 3.86
2364 4367 3.470709 CCACCTACATGGCATACAGAAG 58.529 50.000 0.00 0.00 40.22 2.85
2379 4383 2.422235 CGGTCATTAATTGGGCCACCTA 60.422 50.000 5.23 0.00 37.76 3.08
2389 4393 6.884832 TCATAACTCTCACCGGTCATTAATT 58.115 36.000 2.59 0.00 0.00 1.40
2399 4403 3.861840 ACAACCATCATAACTCTCACCG 58.138 45.455 0.00 0.00 0.00 4.94
2401 4405 5.971763 AGAGACAACCATCATAACTCTCAC 58.028 41.667 0.00 0.00 0.00 3.51
2403 4407 5.362430 AGGAGAGACAACCATCATAACTCTC 59.638 44.000 0.00 0.00 44.28 3.20
2405 4409 5.362430 AGAGGAGAGACAACCATCATAACTC 59.638 44.000 0.00 0.00 0.00 3.01
2407 4411 5.452636 GGAGAGGAGAGACAACCATCATAAC 60.453 48.000 0.00 0.00 0.00 1.89
2408 4412 4.651503 GGAGAGGAGAGACAACCATCATAA 59.348 45.833 0.00 0.00 0.00 1.90
2409 4413 4.219115 GGAGAGGAGAGACAACCATCATA 58.781 47.826 0.00 0.00 0.00 2.15
2410 4414 3.037549 GGAGAGGAGAGACAACCATCAT 58.962 50.000 0.00 0.00 0.00 2.45
2411 4415 2.461695 GGAGAGGAGAGACAACCATCA 58.538 52.381 0.00 0.00 0.00 3.07
2412 4416 1.760029 GGGAGAGGAGAGACAACCATC 59.240 57.143 0.00 0.00 0.00 3.51
2413 4417 1.364328 AGGGAGAGGAGAGACAACCAT 59.636 52.381 0.00 0.00 0.00 3.55
2414 4418 0.787084 AGGGAGAGGAGAGACAACCA 59.213 55.000 0.00 0.00 0.00 3.67
2415 4419 1.480789 GAGGGAGAGGAGAGACAACC 58.519 60.000 0.00 0.00 0.00 3.77
2416 4420 1.006639 AGGAGGGAGAGGAGAGACAAC 59.993 57.143 0.00 0.00 0.00 3.32
2417 4421 1.286553 GAGGAGGGAGAGGAGAGACAA 59.713 57.143 0.00 0.00 0.00 3.18
2418 4422 0.923358 GAGGAGGGAGAGGAGAGACA 59.077 60.000 0.00 0.00 0.00 3.41
2419 4423 0.185175 GGAGGAGGGAGAGGAGAGAC 59.815 65.000 0.00 0.00 0.00 3.36
2420 4424 0.996762 GGGAGGAGGGAGAGGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
2421 4425 1.541672 GGGAGGAGGGAGAGGAGAG 59.458 68.421 0.00 0.00 0.00 3.20
2422 4426 2.015726 GGGGAGGAGGGAGAGGAGA 61.016 68.421 0.00 0.00 0.00 3.71
2423 4427 2.612251 GGGGAGGAGGGAGAGGAG 59.388 72.222 0.00 0.00 0.00 3.69
2424 4428 3.036959 GGGGGAGGAGGGAGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
2442 4446 4.354943 ACAGGGGGAGGGGGACAG 62.355 72.222 0.00 0.00 0.00 3.51
2443 4447 4.348495 GACAGGGGGAGGGGGACA 62.348 72.222 0.00 0.00 0.00 4.02
2449 4453 4.825679 GAGGGGGACAGGGGGAGG 62.826 77.778 0.00 0.00 0.00 4.30
2450 4454 4.825679 GGAGGGGGACAGGGGGAG 62.826 77.778 0.00 0.00 0.00 4.30
2452 4456 4.825679 GAGGAGGGGGACAGGGGG 62.826 77.778 0.00 0.00 0.00 5.40
2453 4457 4.825679 GGAGGAGGGGGACAGGGG 62.826 77.778 0.00 0.00 0.00 4.79
2454 4458 4.825679 GGGAGGAGGGGGACAGGG 62.826 77.778 0.00 0.00 0.00 4.45
2457 4461 3.695825 GAGGGGAGGAGGGGGACA 61.696 72.222 0.00 0.00 0.00 4.02
2463 4467 2.367512 CAAGGGGAGGGGAGGAGG 60.368 72.222 0.00 0.00 0.00 4.30
2465 4469 4.760220 GGCAAGGGGAGGGGAGGA 62.760 72.222 0.00 0.00 0.00 3.71
2488 4492 4.506255 GGGTCGGGGGAAGCATGG 62.506 72.222 0.00 0.00 0.00 3.66
2490 4494 3.090532 GAGGGTCGGGGGAAGCAT 61.091 66.667 0.00 0.00 0.00 3.79
2493 4497 4.416601 AGGGAGGGTCGGGGGAAG 62.417 72.222 0.00 0.00 0.00 3.46
2494 4498 4.410033 GAGGGAGGGTCGGGGGAA 62.410 72.222 0.00 0.00 0.00 3.97
2496 4500 4.416601 AAGAGGGAGGGTCGGGGG 62.417 72.222 0.00 0.00 0.00 5.40
2497 4501 2.764547 GAAGAGGGAGGGTCGGGG 60.765 72.222 0.00 0.00 0.00 5.73
2498 4502 2.764547 GGAAGAGGGAGGGTCGGG 60.765 72.222 0.00 0.00 0.00 5.14
2499 4503 2.764547 GGGAAGAGGGAGGGTCGG 60.765 72.222 0.00 0.00 0.00 4.79
2500 4504 2.764547 GGGGAAGAGGGAGGGTCG 60.765 72.222 0.00 0.00 0.00 4.79
2504 4606 3.148279 CGACGGGGAAGAGGGAGG 61.148 72.222 0.00 0.00 0.00 4.30
2562 7869 2.431942 AGAACTAACGCACGCCCG 60.432 61.111 0.00 0.00 0.00 6.13
2564 7871 3.023591 GCCAGAACTAACGCACGCC 62.024 63.158 0.00 0.00 0.00 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.