Multiple sequence alignment - TraesCS5B01G506500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G506500 chr5B 100.000 4397 0 0 1 4397 671837508 671833112 0.000000e+00 8120.0
1 TraesCS5B01G506500 chr5B 88.921 1390 102 30 315 1668 671453852 671455225 0.000000e+00 1666.0
2 TraesCS5B01G506500 chr5B 83.774 1399 109 60 2878 4192 671366554 671367918 0.000000e+00 1218.0
3 TraesCS5B01G506500 chr5B 88.354 893 80 17 1974 2857 671360983 671361860 0.000000e+00 1051.0
4 TraesCS5B01G506500 chr5B 89.596 817 66 16 2049 2857 671469564 671470369 0.000000e+00 1020.0
5 TraesCS5B01G506500 chr5B 84.485 767 67 27 2861 3598 671470832 671471575 0.000000e+00 710.0
6 TraesCS5B01G506500 chr5B 74.439 1471 263 73 335 1766 671721248 671719852 3.010000e-146 529.0
7 TraesCS5B01G506500 chr5B 86.024 508 45 15 3104 3598 671365451 671365945 5.040000e-144 521.0
8 TraesCS5B01G506500 chr5B 73.873 1508 247 91 336 1766 671479008 671480445 2.390000e-127 466.0
9 TraesCS5B01G506500 chr5B 79.736 607 87 24 336 930 671706475 671707057 1.470000e-109 407.0
10 TraesCS5B01G506500 chr5B 79.895 572 81 17 1890 2455 672440031 672439488 5.330000e-104 388.0
11 TraesCS5B01G506500 chr5B 79.895 572 81 17 1890 2455 672473059 672472516 5.330000e-104 388.0
12 TraesCS5B01G506500 chr5B 95.946 222 7 2 1758 1977 671469003 671469224 4.180000e-95 359.0
13 TraesCS5B01G506500 chr5B 79.032 558 79 26 283 820 671884640 671884101 9.050000e-92 348.0
14 TraesCS5B01G506500 chr5B 78.269 520 81 22 336 839 676100578 676100075 5.520000e-79 305.0
15 TraesCS5B01G506500 chr5B 75.387 711 128 25 319 1004 671303073 671302385 2.570000e-77 300.0
16 TraesCS5B01G506500 chr5B 76.680 506 79 23 350 825 671903045 671902549 1.220000e-60 244.0
17 TraesCS5B01G506500 chr5B 83.333 276 21 12 2845 3099 671362670 671362941 9.510000e-57 231.0
18 TraesCS5B01G506500 chr5B 74.026 616 122 24 1039 1625 671875785 671875179 2.660000e-52 217.0
19 TraesCS5B01G506500 chr5B 84.038 213 20 5 1766 1968 671360688 671360896 4.490000e-45 193.0
20 TraesCS5B01G506500 chr5B 78.233 317 52 13 336 642 671497516 671497825 2.090000e-43 187.0
21 TraesCS5B01G506500 chr5B 87.671 73 9 0 4286 4358 671367935 671368007 7.840000e-13 86.1
22 TraesCS5B01G506500 chr5B 100.000 35 0 0 1732 1766 671468950 671468984 1.020000e-06 65.8
23 TraesCS5B01G506500 chr5D 91.442 1040 73 9 1766 2797 532335144 532334113 0.000000e+00 1413.0
24 TraesCS5B01G506500 chr5D 80.530 1546 183 53 266 1766 532336645 532335173 0.000000e+00 1079.0
25 TraesCS5B01G506500 chr5D 85.967 962 78 26 2858 3790 532334093 532333160 0.000000e+00 976.0
26 TraesCS5B01G506500 chr5D 88.783 419 30 5 3943 4358 532333169 532332765 8.490000e-137 497.0
27 TraesCS5B01G506500 chr5D 79.043 606 93 22 336 930 532271378 532271960 6.900000e-103 385.0
28 TraesCS5B01G506500 chr5D 77.316 626 103 22 319 926 532248811 532248207 2.530000e-87 333.0
29 TraesCS5B01G506500 chr5D 77.400 500 75 26 363 834 532244146 532243657 3.370000e-66 263.0
30 TraesCS5B01G506500 chr2D 74.242 1386 227 79 293 1625 647275332 647274024 3.100000e-126 462.0
31 TraesCS5B01G506500 chr2D 91.071 56 4 1 4227 4282 535105614 535105560 1.700000e-09 75.0
32 TraesCS5B01G506500 chr4A 79.192 668 95 29 336 987 640001115 640000476 1.460000e-114 424.0
33 TraesCS5B01G506500 chr4A 82.553 470 60 15 1892 2351 639957725 639958182 1.150000e-105 394.0
34 TraesCS5B01G506500 chr4A 77.286 700 117 21 1890 2579 639377620 639378287 1.490000e-99 374.0
35 TraesCS5B01G506500 chr4A 88.811 286 30 2 3589 3873 639979514 639979798 2.520000e-92 350.0
36 TraesCS5B01G506500 chr4A 76.772 508 86 22 337 825 637200931 637200437 5.640000e-64 255.0
37 TraesCS5B01G506500 chr4A 80.882 272 31 14 4099 4354 639979942 639980208 1.250000e-45 195.0
38 TraesCS5B01G506500 chrUn 79.895 572 81 17 1890 2455 67293662 67293119 5.330000e-104 388.0
39 TraesCS5B01G506500 chr3B 78.812 623 92 25 2180 2798 810115460 810116046 2.480000e-102 383.0
40 TraesCS5B01G506500 chr3B 89.630 135 13 1 1 134 133129973 133130107 2.100000e-38 171.0
41 TraesCS5B01G506500 chr3B 89.706 136 11 2 6 141 512759670 512759538 2.100000e-38 171.0
42 TraesCS5B01G506500 chr3B 88.652 141 13 2 5 142 64548253 64548113 7.560000e-38 169.0
43 TraesCS5B01G506500 chr3B 90.741 54 4 1 4228 4281 190470319 190470267 2.190000e-08 71.3
44 TraesCS5B01G506500 chr1A 78.394 523 85 19 315 825 16301936 16301430 9.180000e-82 315.0
45 TraesCS5B01G506500 chr1A 78.689 488 81 14 348 825 16379775 16379301 1.990000e-78 303.0
46 TraesCS5B01G506500 chr1A 97.826 46 1 0 4227 4272 206793733 206793778 3.650000e-11 80.5
47 TraesCS5B01G506500 chr2A 77.858 551 83 21 290 829 773188971 773189493 5.520000e-79 305.0
48 TraesCS5B01G506500 chr2A 92.126 127 10 0 5 131 127160874 127160748 3.490000e-41 180.0
49 TraesCS5B01G506500 chr2A 87.234 141 18 0 1 141 206083153 206083013 1.270000e-35 161.0
50 TraesCS5B01G506500 chr1D 78.488 516 76 24 315 825 15301245 15300760 5.520000e-79 305.0
51 TraesCS5B01G506500 chr1B 78.689 488 77 17 350 825 22108792 22109264 2.570000e-77 300.0
52 TraesCS5B01G506500 chr1B 77.579 504 90 12 1141 1625 22109544 22110043 2.590000e-72 283.0
53 TraesCS5B01G506500 chr1B 88.806 134 15 0 1 134 117921150 117921017 9.780000e-37 165.0
54 TraesCS5B01G506500 chr1B 88.806 134 15 0 1 134 118354363 118354496 9.780000e-37 165.0
55 TraesCS5B01G506500 chr4B 78.000 350 47 23 586 930 14506381 14506705 4.490000e-45 193.0
56 TraesCS5B01G506500 chr4B 87.075 147 17 2 5 150 364006008 364005863 9.780000e-37 165.0
57 TraesCS5B01G506500 chr6B 90.000 140 12 2 1 138 300732504 300732365 3.490000e-41 180.0
58 TraesCS5B01G506500 chr5A 94.118 51 3 0 4222 4272 707806528 707806578 1.310000e-10 78.7
59 TraesCS5B01G506500 chr3D 95.745 47 2 0 4226 4272 460411386 460411340 4.720000e-10 76.8
60 TraesCS5B01G506500 chr3D 93.478 46 3 0 4227 4272 114669061 114669106 7.890000e-08 69.4
61 TraesCS5B01G506500 chr2B 95.745 47 2 0 4228 4274 716554309 716554355 4.720000e-10 76.8
62 TraesCS5B01G506500 chr3A 90.741 54 4 1 4228 4281 147790928 147790876 2.190000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G506500 chr5B 671833112 671837508 4396 True 8120.000000 8120 100.000000 1 4397 1 chr5B.!!$R3 4396
1 TraesCS5B01G506500 chr5B 671453852 671455225 1373 False 1666.000000 1666 88.921000 315 1668 1 chr5B.!!$F1 1353
2 TraesCS5B01G506500 chr5B 671360688 671368007 7319 False 550.016667 1218 85.532333 1766 4358 6 chr5B.!!$F5 2592
3 TraesCS5B01G506500 chr5B 671468950 671471575 2625 False 538.700000 1020 92.506750 1732 3598 4 chr5B.!!$F6 1866
4 TraesCS5B01G506500 chr5B 671719852 671721248 1396 True 529.000000 529 74.439000 335 1766 1 chr5B.!!$R2 1431
5 TraesCS5B01G506500 chr5B 671479008 671480445 1437 False 466.000000 466 73.873000 336 1766 1 chr5B.!!$F2 1430
6 TraesCS5B01G506500 chr5B 671706475 671707057 582 False 407.000000 407 79.736000 336 930 1 chr5B.!!$F4 594
7 TraesCS5B01G506500 chr5B 672439488 672440031 543 True 388.000000 388 79.895000 1890 2455 1 chr5B.!!$R7 565
8 TraesCS5B01G506500 chr5B 672472516 672473059 543 True 388.000000 388 79.895000 1890 2455 1 chr5B.!!$R8 565
9 TraesCS5B01G506500 chr5B 671884101 671884640 539 True 348.000000 348 79.032000 283 820 1 chr5B.!!$R5 537
10 TraesCS5B01G506500 chr5B 676100075 676100578 503 True 305.000000 305 78.269000 336 839 1 chr5B.!!$R9 503
11 TraesCS5B01G506500 chr5B 671302385 671303073 688 True 300.000000 300 75.387000 319 1004 1 chr5B.!!$R1 685
12 TraesCS5B01G506500 chr5B 671875179 671875785 606 True 217.000000 217 74.026000 1039 1625 1 chr5B.!!$R4 586
13 TraesCS5B01G506500 chr5D 532332765 532336645 3880 True 991.250000 1413 86.680500 266 4358 4 chr5D.!!$R3 4092
14 TraesCS5B01G506500 chr5D 532271378 532271960 582 False 385.000000 385 79.043000 336 930 1 chr5D.!!$F1 594
15 TraesCS5B01G506500 chr5D 532248207 532248811 604 True 333.000000 333 77.316000 319 926 1 chr5D.!!$R2 607
16 TraesCS5B01G506500 chr2D 647274024 647275332 1308 True 462.000000 462 74.242000 293 1625 1 chr2D.!!$R2 1332
17 TraesCS5B01G506500 chr4A 640000476 640001115 639 True 424.000000 424 79.192000 336 987 1 chr4A.!!$R2 651
18 TraesCS5B01G506500 chr4A 639377620 639378287 667 False 374.000000 374 77.286000 1890 2579 1 chr4A.!!$F1 689
19 TraesCS5B01G506500 chr4A 639979514 639980208 694 False 272.500000 350 84.846500 3589 4354 2 chr4A.!!$F3 765
20 TraesCS5B01G506500 chrUn 67293119 67293662 543 True 388.000000 388 79.895000 1890 2455 1 chrUn.!!$R1 565
21 TraesCS5B01G506500 chr3B 810115460 810116046 586 False 383.000000 383 78.812000 2180 2798 1 chr3B.!!$F2 618
22 TraesCS5B01G506500 chr1A 16301430 16301936 506 True 315.000000 315 78.394000 315 825 1 chr1A.!!$R1 510
23 TraesCS5B01G506500 chr2A 773188971 773189493 522 False 305.000000 305 77.858000 290 829 1 chr2A.!!$F1 539
24 TraesCS5B01G506500 chr1B 22108792 22110043 1251 False 291.500000 300 78.134000 350 1625 2 chr1B.!!$F2 1275

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
542 593 0.035056 ACCCCAGCACAGCTTCATAC 60.035 55.0 0.00 0.0 36.40 2.39 F
547 598 0.035056 AGCACAGCTTCATACCCACC 60.035 55.0 0.00 0.0 33.89 4.61 F
1045 1146 0.102300 CTATGGCGGTGTGTCGATCA 59.898 55.0 0.00 0.0 0.00 2.92 F
2272 2866 0.115152 TGGAGAAGGTGCTCTGGAGA 59.885 55.0 1.35 0.0 35.26 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1780 2010 0.036306 CGCCTGGTAACCTCCTTGTT 59.964 55.000 0.0 0.0 0.00 2.83 R
2376 2971 1.329906 CTCACGCCATCATCTTTGCTC 59.670 52.381 0.0 0.0 0.00 4.26 R
2661 3258 1.134521 GCGGGTTATCACATGACAGGA 60.135 52.381 0.0 0.0 0.00 3.86 R
4095 9475 0.253044 GAATGCACTACCTGCCTCCA 59.747 55.000 0.0 0.0 46.51 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.540153 CGCCCCTTGTCCTACATG 57.460 61.111 0.00 0.00 0.00 3.21
18 19 1.153168 CGCCCCTTGTCCTACATGG 60.153 63.158 0.00 5.26 41.56 3.66
19 20 1.453928 GCCCCTTGTCCTACATGGC 60.454 63.158 0.00 3.92 40.83 4.40
20 21 1.998530 CCCCTTGTCCTACATGGCA 59.001 57.895 0.00 0.00 40.83 4.92
21 22 0.394352 CCCCTTGTCCTACATGGCAC 60.394 60.000 0.00 0.00 40.83 5.01
48 49 4.672251 GCCAGACCATGCCAAGAT 57.328 55.556 0.00 0.00 0.00 2.40
49 50 2.892025 GCCAGACCATGCCAAGATT 58.108 52.632 0.00 0.00 0.00 2.40
50 51 0.743097 GCCAGACCATGCCAAGATTC 59.257 55.000 0.00 0.00 0.00 2.52
51 52 1.019673 CCAGACCATGCCAAGATTCG 58.980 55.000 0.00 0.00 0.00 3.34
52 53 1.679944 CCAGACCATGCCAAGATTCGT 60.680 52.381 0.00 0.00 0.00 3.85
53 54 1.399440 CAGACCATGCCAAGATTCGTG 59.601 52.381 0.00 0.00 0.00 4.35
54 55 0.099436 GACCATGCCAAGATTCGTGC 59.901 55.000 0.00 0.00 0.00 5.34
55 56 0.608856 ACCATGCCAAGATTCGTGCA 60.609 50.000 0.00 0.00 38.23 4.57
56 57 0.742505 CCATGCCAAGATTCGTGCAT 59.257 50.000 0.00 5.22 44.79 3.96
57 58 1.948834 CCATGCCAAGATTCGTGCATA 59.051 47.619 9.29 0.00 42.22 3.14
58 59 2.555325 CCATGCCAAGATTCGTGCATAT 59.445 45.455 9.29 0.00 42.22 1.78
59 60 3.752747 CCATGCCAAGATTCGTGCATATA 59.247 43.478 9.29 0.00 42.22 0.86
60 61 4.378770 CCATGCCAAGATTCGTGCATATAC 60.379 45.833 9.29 0.00 42.22 1.47
61 62 4.071961 TGCCAAGATTCGTGCATATACT 57.928 40.909 0.00 0.00 0.00 2.12
62 63 5.208463 TGCCAAGATTCGTGCATATACTA 57.792 39.130 0.00 0.00 0.00 1.82
63 64 4.988540 TGCCAAGATTCGTGCATATACTAC 59.011 41.667 0.00 0.00 0.00 2.73
64 65 5.221441 TGCCAAGATTCGTGCATATACTACT 60.221 40.000 0.00 0.00 0.00 2.57
65 66 5.119279 GCCAAGATTCGTGCATATACTACTG 59.881 44.000 0.00 0.00 0.00 2.74
66 67 5.635280 CCAAGATTCGTGCATATACTACTGG 59.365 44.000 0.00 0.00 0.00 4.00
67 68 6.447162 CAAGATTCGTGCATATACTACTGGA 58.553 40.000 0.00 0.00 0.00 3.86
68 69 6.015027 AGATTCGTGCATATACTACTGGAC 57.985 41.667 0.00 0.00 0.00 4.02
72 73 3.639538 GTGCATATACTACTGGACGGTG 58.360 50.000 0.00 0.00 0.00 4.94
73 74 3.317149 GTGCATATACTACTGGACGGTGA 59.683 47.826 0.00 0.00 0.00 4.02
74 75 4.022242 GTGCATATACTACTGGACGGTGAT 60.022 45.833 0.00 0.00 0.00 3.06
75 76 4.022329 TGCATATACTACTGGACGGTGATG 60.022 45.833 0.00 0.00 0.00 3.07
76 77 4.618460 GCATATACTACTGGACGGTGATGG 60.618 50.000 0.00 0.00 0.00 3.51
77 78 2.812836 TACTACTGGACGGTGATGGA 57.187 50.000 0.00 0.00 0.00 3.41
78 79 2.160721 ACTACTGGACGGTGATGGAT 57.839 50.000 0.00 0.00 0.00 3.41
79 80 1.757118 ACTACTGGACGGTGATGGATG 59.243 52.381 0.00 0.00 0.00 3.51
80 81 0.464036 TACTGGACGGTGATGGATGC 59.536 55.000 0.00 0.00 0.00 3.91
81 82 1.884464 CTGGACGGTGATGGATGCG 60.884 63.158 0.00 0.00 0.00 4.73
82 83 2.186903 GGACGGTGATGGATGCGT 59.813 61.111 0.00 0.00 0.00 5.24
83 84 2.173669 GGACGGTGATGGATGCGTG 61.174 63.158 0.00 0.00 0.00 5.34
84 85 1.447838 GACGGTGATGGATGCGTGT 60.448 57.895 0.00 0.00 0.00 4.49
85 86 1.695893 GACGGTGATGGATGCGTGTG 61.696 60.000 0.00 0.00 0.00 3.82
86 87 2.463620 CGGTGATGGATGCGTGTGG 61.464 63.158 0.00 0.00 0.00 4.17
87 88 1.377202 GGTGATGGATGCGTGTGGT 60.377 57.895 0.00 0.00 0.00 4.16
88 89 1.369091 GGTGATGGATGCGTGTGGTC 61.369 60.000 0.00 0.00 0.00 4.02
89 90 1.447663 TGATGGATGCGTGTGGTCG 60.448 57.895 0.00 0.00 0.00 4.79
90 91 1.153647 GATGGATGCGTGTGGTCGA 60.154 57.895 0.00 0.00 0.00 4.20
91 92 1.148157 GATGGATGCGTGTGGTCGAG 61.148 60.000 0.00 0.00 0.00 4.04
92 93 1.604147 ATGGATGCGTGTGGTCGAGA 61.604 55.000 0.00 0.00 0.00 4.04
93 94 1.141881 GGATGCGTGTGGTCGAGAT 59.858 57.895 0.00 0.00 0.00 2.75
94 95 1.148157 GGATGCGTGTGGTCGAGATG 61.148 60.000 0.00 0.00 0.00 2.90
95 96 1.148157 GATGCGTGTGGTCGAGATGG 61.148 60.000 0.00 0.00 0.00 3.51
96 97 3.188786 GCGTGTGGTCGAGATGGC 61.189 66.667 0.00 0.00 0.00 4.40
97 98 2.573869 CGTGTGGTCGAGATGGCT 59.426 61.111 0.00 0.00 0.00 4.75
98 99 1.807226 CGTGTGGTCGAGATGGCTA 59.193 57.895 0.00 0.00 0.00 3.93
99 100 0.172578 CGTGTGGTCGAGATGGCTAA 59.827 55.000 0.00 0.00 0.00 3.09
100 101 1.641577 GTGTGGTCGAGATGGCTAAC 58.358 55.000 0.00 0.00 0.00 2.34
101 102 0.172578 TGTGGTCGAGATGGCTAACG 59.827 55.000 0.00 0.00 0.00 3.18
102 103 1.141019 TGGTCGAGATGGCTAACGC 59.859 57.895 0.00 0.00 0.00 4.84
103 104 1.141019 GGTCGAGATGGCTAACGCA 59.859 57.895 0.00 0.00 38.10 5.24
104 105 1.146358 GGTCGAGATGGCTAACGCAC 61.146 60.000 0.00 0.00 38.10 5.34
105 106 0.457853 GTCGAGATGGCTAACGCACA 60.458 55.000 0.00 0.00 38.10 4.57
106 107 0.459899 TCGAGATGGCTAACGCACAT 59.540 50.000 0.00 0.00 38.10 3.21
107 108 1.679153 TCGAGATGGCTAACGCACATA 59.321 47.619 0.00 0.00 38.10 2.29
108 109 2.296190 TCGAGATGGCTAACGCACATAT 59.704 45.455 0.00 0.00 38.10 1.78
109 110 2.409715 CGAGATGGCTAACGCACATATG 59.590 50.000 0.00 0.00 38.10 1.78
110 111 3.393800 GAGATGGCTAACGCACATATGT 58.606 45.455 1.41 1.41 38.10 2.29
111 112 4.556233 GAGATGGCTAACGCACATATGTA 58.444 43.478 8.32 0.00 38.10 2.29
112 113 5.152623 AGATGGCTAACGCACATATGTAT 57.847 39.130 8.32 0.00 38.10 2.29
113 114 4.931601 AGATGGCTAACGCACATATGTATG 59.068 41.667 8.32 6.50 39.55 2.39
114 115 3.398406 TGGCTAACGCACATATGTATGG 58.602 45.455 8.32 3.35 38.00 2.74
115 116 2.742053 GGCTAACGCACATATGTATGGG 59.258 50.000 8.32 8.33 40.06 4.00
124 125 5.940192 CACATATGTATGGGCGTTAACAT 57.060 39.130 8.32 0.00 38.00 2.71
125 126 6.312399 CACATATGTATGGGCGTTAACATT 57.688 37.500 8.32 0.00 38.00 2.71
126 127 6.734137 CACATATGTATGGGCGTTAACATTT 58.266 36.000 8.32 0.00 38.00 2.32
127 128 6.855914 CACATATGTATGGGCGTTAACATTTC 59.144 38.462 8.32 0.00 38.00 2.17
128 129 4.911514 ATGTATGGGCGTTAACATTTCC 57.088 40.909 6.39 1.91 0.00 3.13
129 130 2.678836 TGTATGGGCGTTAACATTTCCG 59.321 45.455 6.39 0.00 0.00 4.30
130 131 2.116827 ATGGGCGTTAACATTTCCGA 57.883 45.000 6.39 0.00 0.00 4.55
131 132 1.893544 TGGGCGTTAACATTTCCGAA 58.106 45.000 6.39 0.00 0.00 4.30
132 133 2.228059 TGGGCGTTAACATTTCCGAAA 58.772 42.857 6.39 0.00 0.00 3.46
133 134 2.621998 TGGGCGTTAACATTTCCGAAAA 59.378 40.909 6.39 0.00 0.00 2.29
134 135 3.256136 TGGGCGTTAACATTTCCGAAAAT 59.744 39.130 6.39 0.00 35.43 1.82
135 136 4.458295 TGGGCGTTAACATTTCCGAAAATA 59.542 37.500 6.39 0.00 33.27 1.40
136 137 5.125739 TGGGCGTTAACATTTCCGAAAATAT 59.874 36.000 6.39 0.00 33.27 1.28
137 138 6.318144 TGGGCGTTAACATTTCCGAAAATATA 59.682 34.615 6.39 0.00 33.27 0.86
138 139 7.013464 TGGGCGTTAACATTTCCGAAAATATAT 59.987 33.333 6.39 0.00 33.27 0.86
139 140 7.863877 GGGCGTTAACATTTCCGAAAATATATT 59.136 33.333 6.39 0.00 33.27 1.28
140 141 9.881529 GGCGTTAACATTTCCGAAAATATATTA 57.118 29.630 6.39 0.00 33.27 0.98
146 147 9.862149 AACATTTCCGAAAATATATTAGGAGGT 57.138 29.630 13.51 11.48 33.27 3.85
147 148 9.862149 ACATTTCCGAAAATATATTAGGAGGTT 57.138 29.630 13.51 0.00 33.27 3.50
150 151 9.555727 TTTCCGAAAATATATTAGGAGGTTCAG 57.444 33.333 13.51 1.76 0.00 3.02
151 152 8.258850 TCCGAAAATATATTAGGAGGTTCAGT 57.741 34.615 11.15 0.00 0.00 3.41
152 153 9.370930 TCCGAAAATATATTAGGAGGTTCAGTA 57.629 33.333 11.15 0.00 0.00 2.74
153 154 9.991906 CCGAAAATATATTAGGAGGTTCAGTAA 57.008 33.333 0.00 0.00 0.00 2.24
157 158 9.774413 AAATATATTAGGAGGTTCAGTAAACGG 57.226 33.333 0.00 0.00 38.87 4.44
158 159 3.967332 TTAGGAGGTTCAGTAAACGGG 57.033 47.619 0.00 0.00 38.87 5.28
159 160 2.019807 AGGAGGTTCAGTAAACGGGA 57.980 50.000 0.00 0.00 38.87 5.14
160 161 2.547990 AGGAGGTTCAGTAAACGGGAT 58.452 47.619 0.00 0.00 38.87 3.85
161 162 2.910977 AGGAGGTTCAGTAAACGGGATT 59.089 45.455 0.00 0.00 38.87 3.01
162 163 4.098894 AGGAGGTTCAGTAAACGGGATTA 58.901 43.478 0.00 0.00 38.87 1.75
163 164 4.161754 AGGAGGTTCAGTAAACGGGATTAG 59.838 45.833 0.00 0.00 38.87 1.73
164 165 4.439968 GAGGTTCAGTAAACGGGATTAGG 58.560 47.826 0.00 0.00 38.87 2.69
165 166 4.098894 AGGTTCAGTAAACGGGATTAGGA 58.901 43.478 0.00 0.00 38.87 2.94
166 167 4.161754 AGGTTCAGTAAACGGGATTAGGAG 59.838 45.833 0.00 0.00 38.87 3.69
167 168 4.161001 GGTTCAGTAAACGGGATTAGGAGA 59.839 45.833 0.00 0.00 38.87 3.71
168 169 5.163332 GGTTCAGTAAACGGGATTAGGAGAT 60.163 44.000 0.00 0.00 38.87 2.75
169 170 6.346896 GTTCAGTAAACGGGATTAGGAGATT 58.653 40.000 0.00 0.00 0.00 2.40
170 171 5.914033 TCAGTAAACGGGATTAGGAGATTG 58.086 41.667 0.00 0.00 0.00 2.67
171 172 5.659525 TCAGTAAACGGGATTAGGAGATTGA 59.340 40.000 0.00 0.00 0.00 2.57
172 173 5.986135 CAGTAAACGGGATTAGGAGATTGAG 59.014 44.000 0.00 0.00 0.00 3.02
173 174 5.897824 AGTAAACGGGATTAGGAGATTGAGA 59.102 40.000 0.00 0.00 0.00 3.27
174 175 5.693769 AAACGGGATTAGGAGATTGAGAA 57.306 39.130 0.00 0.00 0.00 2.87
175 176 5.693769 AACGGGATTAGGAGATTGAGAAA 57.306 39.130 0.00 0.00 0.00 2.52
176 177 5.693769 ACGGGATTAGGAGATTGAGAAAA 57.306 39.130 0.00 0.00 0.00 2.29
177 178 5.675538 ACGGGATTAGGAGATTGAGAAAAG 58.324 41.667 0.00 0.00 0.00 2.27
178 179 5.059833 CGGGATTAGGAGATTGAGAAAAGG 58.940 45.833 0.00 0.00 0.00 3.11
179 180 4.824537 GGGATTAGGAGATTGAGAAAAGGC 59.175 45.833 0.00 0.00 0.00 4.35
180 181 5.398467 GGGATTAGGAGATTGAGAAAAGGCT 60.398 44.000 0.00 0.00 0.00 4.58
181 182 5.530543 GGATTAGGAGATTGAGAAAAGGCTG 59.469 44.000 0.00 0.00 0.00 4.85
182 183 5.762179 TTAGGAGATTGAGAAAAGGCTGA 57.238 39.130 0.00 0.00 0.00 4.26
183 184 4.219264 AGGAGATTGAGAAAAGGCTGAG 57.781 45.455 0.00 0.00 0.00 3.35
184 185 2.682352 GGAGATTGAGAAAAGGCTGAGC 59.318 50.000 0.00 0.00 0.00 4.26
194 195 4.475135 GGCTGAGCCGAACCCCTC 62.475 72.222 8.16 0.00 39.62 4.30
195 196 3.394836 GCTGAGCCGAACCCCTCT 61.395 66.667 0.00 0.00 0.00 3.69
196 197 2.896443 CTGAGCCGAACCCCTCTC 59.104 66.667 0.00 0.00 0.00 3.20
197 198 2.683933 TGAGCCGAACCCCTCTCC 60.684 66.667 0.00 0.00 0.00 3.71
198 199 3.471806 GAGCCGAACCCCTCTCCC 61.472 72.222 0.00 0.00 0.00 4.30
201 202 2.764547 CCGAACCCCTCTCCCCTC 60.765 72.222 0.00 0.00 0.00 4.30
202 203 2.764547 CGAACCCCTCTCCCCTCC 60.765 72.222 0.00 0.00 0.00 4.30
203 204 2.764547 GAACCCCTCTCCCCTCCG 60.765 72.222 0.00 0.00 0.00 4.63
209 210 4.465446 CTCTCCCCTCCGCCCAGA 62.465 72.222 0.00 0.00 0.00 3.86
210 211 3.765257 CTCTCCCCTCCGCCCAGAT 62.765 68.421 0.00 0.00 0.00 2.90
211 212 3.237741 CTCCCCTCCGCCCAGATC 61.238 72.222 0.00 0.00 0.00 2.75
215 216 4.292178 CCTCCGCCCAGATCGCTC 62.292 72.222 0.00 0.00 0.00 5.03
216 217 4.637489 CTCCGCCCAGATCGCTCG 62.637 72.222 0.00 0.00 0.00 5.03
220 221 3.910490 GCCCAGATCGCTCGCTCT 61.910 66.667 0.00 0.00 0.00 4.09
221 222 2.334653 CCCAGATCGCTCGCTCTC 59.665 66.667 0.00 0.00 0.00 3.20
222 223 2.334653 CCAGATCGCTCGCTCTCC 59.665 66.667 0.00 0.00 0.00 3.71
223 224 2.192861 CCAGATCGCTCGCTCTCCT 61.193 63.158 0.00 0.00 0.00 3.69
224 225 0.886938 CCAGATCGCTCGCTCTCCTA 60.887 60.000 0.00 0.00 0.00 2.94
225 226 0.516877 CAGATCGCTCGCTCTCCTAG 59.483 60.000 0.00 0.00 0.00 3.02
226 227 0.107831 AGATCGCTCGCTCTCCTAGT 59.892 55.000 0.00 0.00 0.00 2.57
227 228 0.237235 GATCGCTCGCTCTCCTAGTG 59.763 60.000 0.00 0.00 37.03 2.74
228 229 0.464735 ATCGCTCGCTCTCCTAGTGT 60.465 55.000 0.00 0.00 37.01 3.55
229 230 0.177373 TCGCTCGCTCTCCTAGTGTA 59.823 55.000 0.00 0.00 37.01 2.90
230 231 0.584396 CGCTCGCTCTCCTAGTGTAG 59.416 60.000 0.00 0.00 37.01 2.74
231 232 1.807000 CGCTCGCTCTCCTAGTGTAGA 60.807 57.143 0.00 0.00 37.01 2.59
232 233 1.871039 GCTCGCTCTCCTAGTGTAGAG 59.129 57.143 8.82 8.82 41.82 2.43
233 234 2.743838 GCTCGCTCTCCTAGTGTAGAGT 60.744 54.545 12.85 0.00 41.13 3.24
234 235 2.869801 CTCGCTCTCCTAGTGTAGAGTG 59.130 54.545 16.00 16.00 46.83 3.51
235 236 1.944024 CGCTCTCCTAGTGTAGAGTGG 59.056 57.143 14.98 6.37 43.49 4.00
236 237 2.420269 CGCTCTCCTAGTGTAGAGTGGA 60.420 54.545 14.98 0.00 43.49 4.02
237 238 3.622630 GCTCTCCTAGTGTAGAGTGGAA 58.377 50.000 12.85 0.00 41.13 3.53
238 239 4.017808 GCTCTCCTAGTGTAGAGTGGAAA 58.982 47.826 12.85 0.00 41.13 3.13
239 240 4.463186 GCTCTCCTAGTGTAGAGTGGAAAA 59.537 45.833 12.85 0.00 41.13 2.29
240 241 5.393678 GCTCTCCTAGTGTAGAGTGGAAAAG 60.394 48.000 12.85 0.00 41.13 2.27
241 242 5.642165 TCTCCTAGTGTAGAGTGGAAAAGT 58.358 41.667 0.00 0.00 0.00 2.66
242 243 5.711036 TCTCCTAGTGTAGAGTGGAAAAGTC 59.289 44.000 0.00 0.00 0.00 3.01
243 244 4.458295 TCCTAGTGTAGAGTGGAAAAGTCG 59.542 45.833 0.00 0.00 33.01 4.18
244 245 3.662247 AGTGTAGAGTGGAAAAGTCGG 57.338 47.619 0.00 0.00 33.01 4.79
245 246 2.299297 AGTGTAGAGTGGAAAAGTCGGG 59.701 50.000 0.00 0.00 33.01 5.14
246 247 1.001633 TGTAGAGTGGAAAAGTCGGGC 59.998 52.381 0.00 0.00 33.01 6.13
247 248 1.275573 GTAGAGTGGAAAAGTCGGGCT 59.724 52.381 0.00 0.00 33.01 5.19
248 249 0.321996 AGAGTGGAAAAGTCGGGCTC 59.678 55.000 0.00 0.00 33.01 4.70
249 250 0.673956 GAGTGGAAAAGTCGGGCTCC 60.674 60.000 0.00 0.00 0.00 4.70
250 251 1.072505 GTGGAAAAGTCGGGCTCCA 59.927 57.895 0.00 0.00 35.58 3.86
251 252 0.536460 GTGGAAAAGTCGGGCTCCAA 60.536 55.000 0.00 0.00 39.62 3.53
252 253 0.183971 TGGAAAAGTCGGGCTCCAAA 59.816 50.000 0.00 0.00 35.02 3.28
253 254 1.324383 GGAAAAGTCGGGCTCCAAAA 58.676 50.000 0.00 0.00 0.00 2.44
254 255 1.893137 GGAAAAGTCGGGCTCCAAAAT 59.107 47.619 0.00 0.00 0.00 1.82
255 256 2.094700 GGAAAAGTCGGGCTCCAAAATC 60.095 50.000 0.00 0.00 0.00 2.17
256 257 1.545841 AAAGTCGGGCTCCAAAATCC 58.454 50.000 0.00 0.00 0.00 3.01
257 258 0.323451 AAGTCGGGCTCCAAAATCCC 60.323 55.000 0.00 0.00 36.68 3.85
258 259 1.753078 GTCGGGCTCCAAAATCCCC 60.753 63.158 0.00 0.00 36.69 4.81
259 260 2.235028 TCGGGCTCCAAAATCCCCA 61.235 57.895 0.00 0.00 37.36 4.96
260 261 1.754234 CGGGCTCCAAAATCCCCAG 60.754 63.158 0.00 0.00 37.36 4.45
261 262 1.388133 GGGCTCCAAAATCCCCAGT 59.612 57.895 0.00 0.00 37.46 4.00
262 263 0.684479 GGGCTCCAAAATCCCCAGTC 60.684 60.000 0.00 0.00 37.46 3.51
263 264 0.332972 GGCTCCAAAATCCCCAGTCT 59.667 55.000 0.00 0.00 0.00 3.24
264 265 1.683319 GGCTCCAAAATCCCCAGTCTC 60.683 57.143 0.00 0.00 0.00 3.36
457 470 4.194720 GCGGCATCGTCTCCGTCT 62.195 66.667 11.96 0.00 46.79 4.18
458 471 2.024871 CGGCATCGTCTCCGTCTC 59.975 66.667 4.36 0.00 40.72 3.36
459 472 2.413765 GGCATCGTCTCCGTCTCC 59.586 66.667 0.00 0.00 35.01 3.71
462 475 2.113433 CATCGTCTCCGTCTCCCGT 61.113 63.158 0.00 0.00 35.01 5.28
504 517 2.279069 CGAGCTCCACCAGACACCT 61.279 63.158 8.47 0.00 0.00 4.00
508 521 1.229336 CTCCACCAGACACCTCCCT 60.229 63.158 0.00 0.00 0.00 4.20
509 522 1.536418 TCCACCAGACACCTCCCTG 60.536 63.158 0.00 0.00 0.00 4.45
523 562 2.440796 CCTGGACCGGGCTACGTA 60.441 66.667 7.57 0.00 42.24 3.57
542 593 0.035056 ACCCCAGCACAGCTTCATAC 60.035 55.000 0.00 0.00 36.40 2.39
543 594 0.749454 CCCCAGCACAGCTTCATACC 60.749 60.000 0.00 0.00 36.40 2.73
544 595 0.749454 CCCAGCACAGCTTCATACCC 60.749 60.000 0.00 0.00 36.40 3.69
545 596 0.035152 CCAGCACAGCTTCATACCCA 60.035 55.000 0.00 0.00 36.40 4.51
546 597 1.089920 CAGCACAGCTTCATACCCAC 58.910 55.000 0.00 0.00 36.40 4.61
547 598 0.035056 AGCACAGCTTCATACCCACC 60.035 55.000 0.00 0.00 33.89 4.61
548 599 0.322456 GCACAGCTTCATACCCACCA 60.322 55.000 0.00 0.00 0.00 4.17
549 600 1.886222 GCACAGCTTCATACCCACCAA 60.886 52.381 0.00 0.00 0.00 3.67
729 804 2.631428 CACGTGGCGTTTGAGTGG 59.369 61.111 7.95 0.00 38.32 4.00
730 805 1.885388 CACGTGGCGTTTGAGTGGA 60.885 57.895 7.95 0.00 38.32 4.02
731 806 1.594293 ACGTGGCGTTTGAGTGGAG 60.594 57.895 0.00 0.00 36.35 3.86
732 807 2.946762 GTGGCGTTTGAGTGGAGC 59.053 61.111 0.00 0.00 0.00 4.70
733 808 1.598130 GTGGCGTTTGAGTGGAGCT 60.598 57.895 0.00 0.00 0.00 4.09
734 809 0.320421 GTGGCGTTTGAGTGGAGCTA 60.320 55.000 0.00 0.00 0.00 3.32
831 918 1.068748 GTGCTCTTCGTCTTGTCCGTA 60.069 52.381 0.00 0.00 0.00 4.02
991 1090 1.967535 CTCGTTGGGAGCTCTGTGA 59.032 57.895 14.64 4.30 35.63 3.58
1045 1146 0.102300 CTATGGCGGTGTGTCGATCA 59.898 55.000 0.00 0.00 0.00 2.92
1132 1251 2.463589 TAACCTTGTGCTGGCGGAGG 62.464 60.000 0.00 0.00 0.00 4.30
1133 1252 4.020617 CCTTGTGCTGGCGGAGGA 62.021 66.667 0.00 0.00 0.00 3.71
1134 1253 2.743928 CTTGTGCTGGCGGAGGAC 60.744 66.667 0.00 0.00 43.25 3.85
1160 1279 1.215173 TGGACTGGGCATAATCCAAGG 59.785 52.381 0.00 0.00 38.30 3.61
1257 1376 1.213537 CGACCTGGGCAATTTGCTG 59.786 57.895 20.06 10.90 44.28 4.41
1382 1510 1.067669 TGAGCTACAGTCGGATCATGC 59.932 52.381 0.00 0.00 0.00 4.06
1425 1565 2.680841 TGGCTTCGTTAATTTGATCCCG 59.319 45.455 0.00 0.00 0.00 5.14
1464 1610 4.162690 GTACCCCGAGGCCAGCAG 62.163 72.222 5.01 0.00 36.11 4.24
1470 1616 3.123620 CGAGGCCAGCAGCAGAAC 61.124 66.667 5.01 0.00 46.50 3.01
1527 1703 5.010213 AGAGGAGGATAAAACAGTAGATCGC 59.990 44.000 0.00 0.00 0.00 4.58
1640 1824 2.529389 AGTCCCAAACGCCTCCCT 60.529 61.111 0.00 0.00 0.00 4.20
1649 1833 3.434453 CCAAACGCCTCCCTTATTCCATA 60.434 47.826 0.00 0.00 0.00 2.74
1676 1863 4.937015 CACATCATTCGTATGGATGGCATA 59.063 41.667 0.00 0.00 32.40 3.14
1697 1889 7.540055 GGCATACTCAAAAGAAACTTCTCAATG 59.460 37.037 0.00 0.00 36.28 2.82
1703 1895 4.489679 AAGAAACTTCTCAATGGTTCGC 57.510 40.909 0.00 0.00 36.28 4.70
1715 1909 3.821421 ATGGTTCGCTACTCTTTAGGG 57.179 47.619 0.00 0.00 0.00 3.53
1727 1921 2.040412 CTCTTTAGGGTCAGCCTTTGGT 59.960 50.000 0.00 0.00 34.45 3.67
1730 1924 2.579410 TAGGGTCAGCCTTTGGTTTC 57.421 50.000 0.00 0.00 34.45 2.78
1780 2010 9.162764 GCCTTTGAGTTTATTAGATGTTCTACA 57.837 33.333 0.00 0.00 0.00 2.74
1792 2022 6.681729 AGATGTTCTACAACAAGGAGGTTA 57.318 37.500 0.00 0.00 45.78 2.85
1869 2101 1.132881 TGGCCTTTGAGGGGTTCAATT 60.133 47.619 3.32 0.00 44.90 2.32
2007 2553 1.003355 TCTGGTGCTGGCTAGTTGC 60.003 57.895 0.00 0.00 41.94 4.17
2021 2567 4.153117 GGCTAGTTGCAAATATCTCATCGG 59.847 45.833 7.12 0.00 45.15 4.18
2025 2571 4.943705 AGTTGCAAATATCTCATCGGTGTT 59.056 37.500 0.00 0.00 0.00 3.32
2044 2590 5.295045 GGTGTTCCGTTTATTGGTATGGTAG 59.705 44.000 0.00 0.00 0.00 3.18
2045 2591 6.108015 GTGTTCCGTTTATTGGTATGGTAGA 58.892 40.000 0.00 0.00 0.00 2.59
2052 2640 7.816031 CCGTTTATTGGTATGGTAGATCGTAAT 59.184 37.037 0.00 0.00 0.00 1.89
2138 2728 2.745281 GCACCTAGCGTCATTAAAACCA 59.255 45.455 0.00 0.00 0.00 3.67
2188 2778 5.204833 CACAACTTTAATGGTCTCGTGTTG 58.795 41.667 0.00 0.00 39.27 3.33
2272 2866 0.115152 TGGAGAAGGTGCTCTGGAGA 59.885 55.000 1.35 0.00 35.26 3.71
2295 2889 4.097741 AGTGCTAACATGCTCAACAAACAA 59.902 37.500 0.00 0.00 0.00 2.83
2300 2894 6.349280 GCTAACATGCTCAACAAACAAGGATA 60.349 38.462 0.00 0.00 0.00 2.59
2318 2912 3.467803 GATATGCCTTGCTACCGAAAGT 58.532 45.455 0.00 0.00 0.00 2.66
2393 2988 0.391661 ACGAGCAAAGATGATGGCGT 60.392 50.000 0.00 0.00 0.00 5.68
2410 3005 1.426223 GTGAGCTCGACGACCTCTC 59.574 63.158 18.41 12.54 0.00 3.20
2448 3043 1.736612 CTCCAGCTTCAGAGAAAGGC 58.263 55.000 0.00 0.00 31.43 4.35
2469 3064 5.105310 AGGCGAGTCTGAATAATGTACTGTT 60.105 40.000 0.00 0.00 0.00 3.16
2623 3220 8.087750 TCAAAGAAGTTGCCGAATTAATTGAAT 58.912 29.630 5.17 0.00 37.13 2.57
2646 3243 4.054671 CCACAATTTTAACGTGGCATTGT 58.945 39.130 8.92 8.92 43.43 2.71
2652 3249 5.446143 TTTTAACGTGGCATTGTGATTCT 57.554 34.783 0.00 0.00 0.00 2.40
2661 3258 4.660303 TGGCATTGTGATTCTCCCTATACT 59.340 41.667 0.00 0.00 0.00 2.12
2662 3259 5.221722 TGGCATTGTGATTCTCCCTATACTC 60.222 44.000 0.00 0.00 0.00 2.59
2663 3260 5.241662 GCATTGTGATTCTCCCTATACTCC 58.758 45.833 0.00 0.00 0.00 3.85
2664 3261 5.012561 GCATTGTGATTCTCCCTATACTCCT 59.987 44.000 0.00 0.00 0.00 3.69
2667 3264 5.141182 TGTGATTCTCCCTATACTCCTGTC 58.859 45.833 0.00 0.00 0.00 3.51
2668 3265 5.141182 GTGATTCTCCCTATACTCCTGTCA 58.859 45.833 0.00 0.00 0.00 3.58
2669 3266 5.777732 GTGATTCTCCCTATACTCCTGTCAT 59.222 44.000 0.00 0.00 0.00 3.06
2670 3267 5.777223 TGATTCTCCCTATACTCCTGTCATG 59.223 44.000 0.00 0.00 0.00 3.07
2671 3268 4.816048 TCTCCCTATACTCCTGTCATGT 57.184 45.455 0.00 0.00 0.00 3.21
2672 3269 4.474394 TCTCCCTATACTCCTGTCATGTG 58.526 47.826 0.00 0.00 0.00 3.21
2680 3277 2.168521 ACTCCTGTCATGTGATAACCCG 59.831 50.000 0.00 0.00 0.00 5.28
2777 3374 7.875316 ATTATCTCTCGAATTTACACCATCG 57.125 36.000 0.00 0.00 36.67 3.84
2790 3388 2.838202 ACACCATCGTTCTGTAAGGGAT 59.162 45.455 0.00 0.00 0.00 3.85
2803 3401 8.669243 GTTCTGTAAGGGATCATTTAACTTCTG 58.331 37.037 0.00 0.00 0.00 3.02
2804 3402 8.146053 TCTGTAAGGGATCATTTAACTTCTGA 57.854 34.615 0.00 0.00 0.00 3.27
2818 3419 7.962964 TTAACTTCTGATGGTTGTTACTCAG 57.037 36.000 6.74 0.00 37.14 3.35
2824 3425 4.641396 TGATGGTTGTTACTCAGTTCTGG 58.359 43.478 0.00 0.00 0.00 3.86
2840 3441 9.431887 CTCAGTTCTGGAGTATAGATAGTAGAC 57.568 40.741 0.00 0.00 0.00 2.59
2841 3442 8.935741 TCAGTTCTGGAGTATAGATAGTAGACA 58.064 37.037 0.00 0.00 0.00 3.41
2879 4308 8.679288 GCAATATGCTTTTATAGTATGCTTGG 57.321 34.615 0.00 0.00 40.96 3.61
2898 4327 7.350382 TGCTTGGTTTATGGGTTAGATCATAA 58.650 34.615 0.00 0.00 35.00 1.90
2900 4329 8.515414 GCTTGGTTTATGGGTTAGATCATAATC 58.485 37.037 0.00 0.00 36.23 1.75
3059 4491 8.445275 TTTCTTGCAGTTAACTGTCTAAATCA 57.555 30.769 30.90 18.33 45.45 2.57
3088 4531 6.155475 AGGTTTTGCTGCATAAAAGTAACA 57.845 33.333 1.84 0.00 0.00 2.41
3212 7170 4.637091 TGATACAGACTGCCAATCATTGTG 59.363 41.667 1.25 0.00 0.00 3.33
3336 7294 4.765339 TGAAGACCGAACTGTCTATCAGAA 59.235 41.667 1.79 0.00 44.68 3.02
3339 7305 4.707448 AGACCGAACTGTCTATCAGAATGT 59.293 41.667 1.79 0.00 46.27 2.71
3343 7309 5.062683 CCGAACTGTCTATCAGAATGTTGTG 59.937 44.000 1.79 0.00 46.27 3.33
3371 7337 6.144078 AGTTAAAAATGCGTCCTTCACTTT 57.856 33.333 0.00 0.00 0.00 2.66
3376 7342 4.489679 AATGCGTCCTTCACTTTTTCTC 57.510 40.909 0.00 0.00 0.00 2.87
3431 7404 2.038295 AGGAGAGGAAGCTTCAACACAG 59.962 50.000 27.02 0.00 0.00 3.66
3432 7405 2.037772 GGAGAGGAAGCTTCAACACAGA 59.962 50.000 27.02 0.00 0.00 3.41
3480 7453 3.438781 AGTGCAACCATTTGTGTATACCG 59.561 43.478 0.00 0.00 37.80 4.02
3498 7471 2.364002 ACCGTTGCCTGCTTTTTACAAT 59.636 40.909 0.00 0.00 0.00 2.71
3528 7501 6.441093 TCCATTCAACATGAGATTTACTGC 57.559 37.500 0.00 0.00 0.00 4.40
3530 7503 5.125900 CCATTCAACATGAGATTTACTGCCA 59.874 40.000 0.00 0.00 0.00 4.92
3531 7504 6.350361 CCATTCAACATGAGATTTACTGCCAA 60.350 38.462 0.00 0.00 0.00 4.52
3538 7511 7.989826 ACATGAGATTTACTGCCAAAATAGTC 58.010 34.615 0.00 0.00 0.00 2.59
3581 7556 7.154656 TCGGTAGAATTCATAATGAGTGGATG 58.845 38.462 8.44 0.00 0.00 3.51
3627 8935 3.072468 CCAGGCTGTGGGCATTGG 61.072 66.667 14.43 0.00 43.63 3.16
3670 8987 2.076863 GGATTTTGGAGTGGACGTGAG 58.923 52.381 0.00 0.00 0.00 3.51
3761 9078 3.541996 TGCAGCTTGATCCGAAGATAA 57.458 42.857 0.00 0.00 30.90 1.75
3788 9106 2.892374 CCGACACAACTCTATGATGCA 58.108 47.619 0.00 0.00 0.00 3.96
3803 9121 4.410743 GCAAAGCTGCGGAGGTGC 62.411 66.667 10.11 6.00 39.20 5.01
3804 9122 4.093952 CAAAGCTGCGGAGGTGCG 62.094 66.667 10.11 0.00 37.81 5.34
3822 9140 5.466393 AGGTGCGGATTTTGAAAAGAAAATG 59.534 36.000 0.00 0.00 36.00 2.32
3827 9145 6.140580 GCGGATTTTGAAAAGAAAATGTTTGC 59.859 34.615 0.00 0.00 36.00 3.68
3845 9163 0.378610 GCGATGCAAGGGAGCTTAAC 59.621 55.000 0.00 0.00 34.99 2.01
3851 9169 2.557924 TGCAAGGGAGCTTAACATTGTG 59.442 45.455 11.25 0.00 34.99 3.33
3861 9179 3.485877 GCTTAACATTGTGGCGATCAGAC 60.486 47.826 0.00 0.00 0.00 3.51
3863 9181 2.015736 ACATTGTGGCGATCAGACTC 57.984 50.000 0.00 0.00 0.00 3.36
3864 9182 1.552337 ACATTGTGGCGATCAGACTCT 59.448 47.619 0.00 0.00 0.00 3.24
3865 9183 1.931841 CATTGTGGCGATCAGACTCTG 59.068 52.381 0.00 0.00 0.00 3.35
3877 9195 1.887198 CAGACTCTGTAGTGAACGGGT 59.113 52.381 0.00 0.00 35.56 5.28
3932 9250 7.951347 AAGCATTCCATCTTTGAGAAATACT 57.049 32.000 0.00 0.00 0.00 2.12
3933 9251 7.330900 AGCATTCCATCTTTGAGAAATACTG 57.669 36.000 0.00 0.00 0.00 2.74
4048 9411 4.687483 TCGGAATTGTTTCGTAGAAAGGAC 59.313 41.667 0.00 0.00 45.90 3.85
4056 9419 8.665643 TTGTTTCGTAGAAAGGACTTCATTTA 57.334 30.769 0.00 0.00 45.90 1.40
4059 9422 8.985805 GTTTCGTAGAAAGGACTTCATTTAAGA 58.014 33.333 0.00 0.00 45.90 2.10
4060 9423 8.758633 TTCGTAGAAAGGACTTCATTTAAGAG 57.241 34.615 0.00 0.00 45.90 2.85
4061 9424 6.812160 TCGTAGAAAGGACTTCATTTAAGAGC 59.188 38.462 0.00 0.00 38.67 4.09
4062 9425 6.590292 CGTAGAAAGGACTTCATTTAAGAGCA 59.410 38.462 0.00 0.00 38.67 4.26
4063 9426 7.117812 CGTAGAAAGGACTTCATTTAAGAGCAA 59.882 37.037 0.00 0.00 38.67 3.91
4064 9427 7.446001 AGAAAGGACTTCATTTAAGAGCAAG 57.554 36.000 0.00 0.00 38.67 4.01
4065 9428 7.001073 AGAAAGGACTTCATTTAAGAGCAAGT 58.999 34.615 0.00 0.00 38.67 3.16
4066 9429 8.157476 AGAAAGGACTTCATTTAAGAGCAAGTA 58.843 33.333 0.00 0.00 38.67 2.24
4067 9430 8.691661 AAAGGACTTCATTTAAGAGCAAGTAA 57.308 30.769 0.00 0.00 38.67 2.24
4068 9431 8.691661 AAGGACTTCATTTAAGAGCAAGTAAA 57.308 30.769 0.00 0.00 38.67 2.01
4069 9432 8.870075 AGGACTTCATTTAAGAGCAAGTAAAT 57.130 30.769 0.00 0.00 38.67 1.40
4070 9433 9.959721 AGGACTTCATTTAAGAGCAAGTAAATA 57.040 29.630 0.00 0.00 38.67 1.40
4071 9434 9.989869 GGACTTCATTTAAGAGCAAGTAAATAC 57.010 33.333 0.00 0.00 38.67 1.89
4095 9475 8.627208 ACTAGCATATGCATTGTAGCTAATTT 57.373 30.769 28.62 6.05 45.16 1.82
4096 9476 8.509690 ACTAGCATATGCATTGTAGCTAATTTG 58.490 33.333 28.62 7.43 45.16 2.32
4153 9574 4.846779 TTTGTTCCTGGAGCATAACAAC 57.153 40.909 14.23 0.00 40.47 3.32
4191 9614 4.112634 AGGGATTTTCCTTTACACAGCA 57.887 40.909 0.00 0.00 36.57 4.41
4251 9677 7.435068 AAATTGTACTAGAGTTGCGACAATT 57.565 32.000 6.90 12.41 41.45 2.32
4260 9686 6.515272 AGAGTTGCGACAATTAATTTGGAT 57.485 33.333 6.90 0.00 39.80 3.41
4272 9698 5.546621 TTAATTTGGATCGGAGGGAGTAG 57.453 43.478 0.00 0.00 0.00 2.57
4363 9796 2.581354 GCCATGGCACTCTCGTCT 59.419 61.111 32.08 0.00 41.49 4.18
4364 9797 1.078848 GCCATGGCACTCTCGTCTT 60.079 57.895 32.08 0.00 41.49 3.01
4365 9798 1.086634 GCCATGGCACTCTCGTCTTC 61.087 60.000 32.08 0.00 41.49 2.87
4366 9799 0.247460 CCATGGCACTCTCGTCTTCA 59.753 55.000 0.00 0.00 0.00 3.02
4367 9800 1.338105 CCATGGCACTCTCGTCTTCAA 60.338 52.381 0.00 0.00 0.00 2.69
4368 9801 1.998315 CATGGCACTCTCGTCTTCAAG 59.002 52.381 0.00 0.00 0.00 3.02
4369 9802 0.319900 TGGCACTCTCGTCTTCAAGC 60.320 55.000 0.00 0.00 0.00 4.01
4370 9803 0.037790 GGCACTCTCGTCTTCAAGCT 60.038 55.000 0.00 0.00 0.00 3.74
4371 9804 1.345410 GCACTCTCGTCTTCAAGCTC 58.655 55.000 0.00 0.00 0.00 4.09
4372 9805 1.336332 GCACTCTCGTCTTCAAGCTCA 60.336 52.381 0.00 0.00 0.00 4.26
4373 9806 2.323959 CACTCTCGTCTTCAAGCTCAC 58.676 52.381 0.00 0.00 0.00 3.51
4374 9807 2.030363 CACTCTCGTCTTCAAGCTCACT 60.030 50.000 0.00 0.00 0.00 3.41
4375 9808 2.625790 ACTCTCGTCTTCAAGCTCACTT 59.374 45.455 0.00 0.00 36.19 3.16
4376 9809 3.068873 ACTCTCGTCTTCAAGCTCACTTT 59.931 43.478 0.00 0.00 32.29 2.66
4377 9810 3.643763 TCTCGTCTTCAAGCTCACTTTC 58.356 45.455 0.00 0.00 32.29 2.62
4378 9811 2.734079 CTCGTCTTCAAGCTCACTTTCC 59.266 50.000 0.00 0.00 32.29 3.13
4379 9812 1.457303 CGTCTTCAAGCTCACTTTCCG 59.543 52.381 0.00 0.00 32.29 4.30
4380 9813 1.801178 GTCTTCAAGCTCACTTTCCGG 59.199 52.381 0.00 0.00 32.29 5.14
4381 9814 0.519077 CTTCAAGCTCACTTTCCGGC 59.481 55.000 0.00 0.00 32.29 6.13
4382 9815 0.108585 TTCAAGCTCACTTTCCGGCT 59.891 50.000 0.00 0.00 32.29 5.52
4383 9816 0.108585 TCAAGCTCACTTTCCGGCTT 59.891 50.000 0.00 0.00 44.43 4.35
4384 9817 0.519077 CAAGCTCACTTTCCGGCTTC 59.481 55.000 0.00 0.00 42.15 3.86
4385 9818 0.108585 AAGCTCACTTTCCGGCTTCA 59.891 50.000 0.00 0.00 40.40 3.02
4386 9819 0.321122 AGCTCACTTTCCGGCTTCAG 60.321 55.000 0.00 0.00 0.00 3.02
4387 9820 1.916697 GCTCACTTTCCGGCTTCAGC 61.917 60.000 0.00 0.00 41.14 4.26
4388 9821 0.321122 CTCACTTTCCGGCTTCAGCT 60.321 55.000 0.00 0.00 41.70 4.24
4389 9822 0.320771 TCACTTTCCGGCTTCAGCTC 60.321 55.000 0.00 0.00 41.70 4.09
4390 9823 1.003233 ACTTTCCGGCTTCAGCTCC 60.003 57.895 0.00 0.00 41.70 4.70
4391 9824 1.003355 CTTTCCGGCTTCAGCTCCA 60.003 57.895 0.00 0.00 41.70 3.86
4392 9825 1.301677 CTTTCCGGCTTCAGCTCCAC 61.302 60.000 0.00 0.00 41.70 4.02
4393 9826 2.050836 TTTCCGGCTTCAGCTCCACA 62.051 55.000 0.00 0.00 41.70 4.17
4394 9827 2.731691 TTCCGGCTTCAGCTCCACAC 62.732 60.000 0.00 0.00 41.70 3.82
4395 9828 3.114616 CGGCTTCAGCTCCACACG 61.115 66.667 0.00 0.00 41.70 4.49
4396 9829 2.743928 GGCTTCAGCTCCACACGG 60.744 66.667 0.00 0.00 41.70 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.153168 CCATGTAGGACAAGGGGCG 60.153 63.158 0.00 0.00 41.22 6.13
1 2 1.453928 GCCATGTAGGACAAGGGGC 60.454 63.158 3.29 4.26 37.43 5.80
3 4 0.327924 TGTGCCATGTAGGACAAGGG 59.672 55.000 3.29 0.57 37.43 3.95
4 5 2.198827 TTGTGCCATGTAGGACAAGG 57.801 50.000 5.21 0.00 39.79 3.61
5 6 4.582701 TTTTTGTGCCATGTAGGACAAG 57.417 40.909 8.55 0.00 41.22 3.16
32 33 1.019673 CGAATCTTGGCATGGTCTGG 58.980 55.000 0.00 0.00 0.00 3.86
33 34 1.399440 CACGAATCTTGGCATGGTCTG 59.601 52.381 0.00 0.00 0.00 3.51
34 35 1.742761 CACGAATCTTGGCATGGTCT 58.257 50.000 0.00 0.00 0.00 3.85
35 36 0.099436 GCACGAATCTTGGCATGGTC 59.901 55.000 0.00 0.00 0.00 4.02
36 37 0.608856 TGCACGAATCTTGGCATGGT 60.609 50.000 0.00 0.00 0.00 3.55
37 38 0.742505 ATGCACGAATCTTGGCATGG 59.257 50.000 0.00 0.00 44.64 3.66
38 39 3.909776 ATATGCACGAATCTTGGCATG 57.090 42.857 8.12 0.00 45.74 4.06
40 41 4.071961 AGTATATGCACGAATCTTGGCA 57.928 40.909 0.00 0.00 41.00 4.92
41 42 5.119279 CAGTAGTATATGCACGAATCTTGGC 59.881 44.000 0.00 0.00 0.00 4.52
42 43 5.635280 CCAGTAGTATATGCACGAATCTTGG 59.365 44.000 0.00 0.00 0.00 3.61
43 44 6.363626 GTCCAGTAGTATATGCACGAATCTTG 59.636 42.308 0.00 0.00 0.00 3.02
44 45 6.448006 GTCCAGTAGTATATGCACGAATCTT 58.552 40.000 0.00 0.00 0.00 2.40
45 46 5.334957 CGTCCAGTAGTATATGCACGAATCT 60.335 44.000 0.00 0.00 0.00 2.40
46 47 4.852104 CGTCCAGTAGTATATGCACGAATC 59.148 45.833 0.00 0.00 0.00 2.52
47 48 4.321008 CCGTCCAGTAGTATATGCACGAAT 60.321 45.833 0.00 0.00 0.00 3.34
48 49 3.004002 CCGTCCAGTAGTATATGCACGAA 59.996 47.826 0.00 0.00 0.00 3.85
49 50 2.551032 CCGTCCAGTAGTATATGCACGA 59.449 50.000 0.00 0.00 0.00 4.35
50 51 2.292569 ACCGTCCAGTAGTATATGCACG 59.707 50.000 0.00 0.00 0.00 5.34
51 52 3.317149 TCACCGTCCAGTAGTATATGCAC 59.683 47.826 0.00 0.00 0.00 4.57
52 53 3.558033 TCACCGTCCAGTAGTATATGCA 58.442 45.455 0.00 0.00 0.00 3.96
53 54 4.486090 CATCACCGTCCAGTAGTATATGC 58.514 47.826 0.00 0.00 0.00 3.14
54 55 4.765339 TCCATCACCGTCCAGTAGTATATG 59.235 45.833 0.00 0.00 0.00 1.78
55 56 4.994282 TCCATCACCGTCCAGTAGTATAT 58.006 43.478 0.00 0.00 0.00 0.86
56 57 4.442401 TCCATCACCGTCCAGTAGTATA 57.558 45.455 0.00 0.00 0.00 1.47
57 58 3.308035 TCCATCACCGTCCAGTAGTAT 57.692 47.619 0.00 0.00 0.00 2.12
58 59 2.812836 TCCATCACCGTCCAGTAGTA 57.187 50.000 0.00 0.00 0.00 1.82
59 60 1.757118 CATCCATCACCGTCCAGTAGT 59.243 52.381 0.00 0.00 0.00 2.73
60 61 1.539065 GCATCCATCACCGTCCAGTAG 60.539 57.143 0.00 0.00 0.00 2.57
61 62 0.464036 GCATCCATCACCGTCCAGTA 59.536 55.000 0.00 0.00 0.00 2.74
62 63 1.221840 GCATCCATCACCGTCCAGT 59.778 57.895 0.00 0.00 0.00 4.00
63 64 1.884464 CGCATCCATCACCGTCCAG 60.884 63.158 0.00 0.00 0.00 3.86
64 65 2.186644 CGCATCCATCACCGTCCA 59.813 61.111 0.00 0.00 0.00 4.02
65 66 2.173669 CACGCATCCATCACCGTCC 61.174 63.158 0.00 0.00 0.00 4.79
66 67 1.447838 ACACGCATCCATCACCGTC 60.448 57.895 0.00 0.00 0.00 4.79
67 68 1.741401 CACACGCATCCATCACCGT 60.741 57.895 0.00 0.00 0.00 4.83
68 69 2.463620 CCACACGCATCCATCACCG 61.464 63.158 0.00 0.00 0.00 4.94
69 70 1.369091 GACCACACGCATCCATCACC 61.369 60.000 0.00 0.00 0.00 4.02
70 71 1.695893 CGACCACACGCATCCATCAC 61.696 60.000 0.00 0.00 0.00 3.06
71 72 1.447663 CGACCACACGCATCCATCA 60.448 57.895 0.00 0.00 0.00 3.07
72 73 1.148157 CTCGACCACACGCATCCATC 61.148 60.000 0.00 0.00 0.00 3.51
73 74 1.153568 CTCGACCACACGCATCCAT 60.154 57.895 0.00 0.00 0.00 3.41
74 75 1.604147 ATCTCGACCACACGCATCCA 61.604 55.000 0.00 0.00 0.00 3.41
75 76 1.141881 ATCTCGACCACACGCATCC 59.858 57.895 0.00 0.00 0.00 3.51
76 77 1.148157 CCATCTCGACCACACGCATC 61.148 60.000 0.00 0.00 0.00 3.91
77 78 1.153568 CCATCTCGACCACACGCAT 60.154 57.895 0.00 0.00 0.00 4.73
78 79 2.261361 CCATCTCGACCACACGCA 59.739 61.111 0.00 0.00 0.00 5.24
79 80 2.279502 TAGCCATCTCGACCACACGC 62.280 60.000 0.00 0.00 0.00 5.34
80 81 0.172578 TTAGCCATCTCGACCACACG 59.827 55.000 0.00 0.00 0.00 4.49
81 82 1.641577 GTTAGCCATCTCGACCACAC 58.358 55.000 0.00 0.00 0.00 3.82
82 83 0.172578 CGTTAGCCATCTCGACCACA 59.827 55.000 0.00 0.00 0.00 4.17
83 84 1.146358 GCGTTAGCCATCTCGACCAC 61.146 60.000 0.00 0.00 37.42 4.16
84 85 1.141019 GCGTTAGCCATCTCGACCA 59.859 57.895 0.00 0.00 37.42 4.02
85 86 1.141019 TGCGTTAGCCATCTCGACC 59.859 57.895 0.00 0.00 44.33 4.79
86 87 0.457853 TGTGCGTTAGCCATCTCGAC 60.458 55.000 0.00 0.00 44.33 4.20
87 88 0.459899 ATGTGCGTTAGCCATCTCGA 59.540 50.000 0.00 0.00 44.33 4.04
88 89 2.134201 TATGTGCGTTAGCCATCTCG 57.866 50.000 0.00 0.00 44.33 4.04
89 90 3.393800 ACATATGTGCGTTAGCCATCTC 58.606 45.455 7.78 0.00 44.33 2.75
90 91 3.475566 ACATATGTGCGTTAGCCATCT 57.524 42.857 7.78 0.00 44.33 2.90
91 92 4.093408 CCATACATATGTGCGTTAGCCATC 59.907 45.833 18.81 0.00 44.33 3.51
92 93 4.002982 CCATACATATGTGCGTTAGCCAT 58.997 43.478 18.81 0.00 44.33 4.40
93 94 3.398406 CCATACATATGTGCGTTAGCCA 58.602 45.455 18.81 0.00 44.33 4.75
94 95 2.742053 CCCATACATATGTGCGTTAGCC 59.258 50.000 18.81 0.00 44.33 3.93
95 96 2.159627 GCCCATACATATGTGCGTTAGC 59.840 50.000 18.81 9.63 45.41 3.09
101 102 3.562141 TGTTAACGCCCATACATATGTGC 59.438 43.478 18.81 11.77 34.38 4.57
102 103 5.940192 ATGTTAACGCCCATACATATGTG 57.060 39.130 18.81 2.40 29.93 3.21
103 104 6.016610 GGAAATGTTAACGCCCATACATATGT 60.017 38.462 13.93 13.93 31.40 2.29
104 105 6.378582 GGAAATGTTAACGCCCATACATATG 58.621 40.000 0.00 0.00 31.40 1.78
105 106 5.180492 CGGAAATGTTAACGCCCATACATAT 59.820 40.000 0.26 0.00 31.40 1.78
106 107 4.512198 CGGAAATGTTAACGCCCATACATA 59.488 41.667 0.26 0.00 31.40 2.29
107 108 3.314080 CGGAAATGTTAACGCCCATACAT 59.686 43.478 0.26 0.00 32.89 2.29
108 109 2.678836 CGGAAATGTTAACGCCCATACA 59.321 45.455 0.26 0.00 0.00 2.29
109 110 2.937799 TCGGAAATGTTAACGCCCATAC 59.062 45.455 0.26 0.00 0.00 2.39
110 111 3.263489 TCGGAAATGTTAACGCCCATA 57.737 42.857 0.26 0.00 0.00 2.74
111 112 2.116827 TCGGAAATGTTAACGCCCAT 57.883 45.000 0.26 0.00 0.00 4.00
112 113 1.893544 TTCGGAAATGTTAACGCCCA 58.106 45.000 0.26 0.00 0.00 5.36
113 114 2.993449 TTTCGGAAATGTTAACGCCC 57.007 45.000 0.00 0.00 0.00 6.13
114 115 8.791355 AATATATTTTCGGAAATGTTAACGCC 57.209 30.769 12.12 0.00 36.22 5.68
120 121 9.862149 ACCTCCTAATATATTTTCGGAAATGTT 57.138 29.630 12.12 6.70 36.22 2.71
121 122 9.862149 AACCTCCTAATATATTTTCGGAAATGT 57.138 29.630 12.12 7.80 36.22 2.71
124 125 9.555727 CTGAACCTCCTAATATATTTTCGGAAA 57.444 33.333 2.68 0.00 0.00 3.13
125 126 8.711170 ACTGAACCTCCTAATATATTTTCGGAA 58.289 33.333 16.00 0.00 0.00 4.30
126 127 8.258850 ACTGAACCTCCTAATATATTTTCGGA 57.741 34.615 16.00 12.65 0.00 4.55
127 128 9.991906 TTACTGAACCTCCTAATATATTTTCGG 57.008 33.333 2.68 7.73 0.00 4.30
131 132 9.774413 CCGTTTACTGAACCTCCTAATATATTT 57.226 33.333 2.68 0.00 34.67 1.40
132 133 8.373220 CCCGTTTACTGAACCTCCTAATATATT 58.627 37.037 2.97 2.97 34.67 1.28
133 134 7.731688 TCCCGTTTACTGAACCTCCTAATATAT 59.268 37.037 0.00 0.00 34.67 0.86
134 135 7.068702 TCCCGTTTACTGAACCTCCTAATATA 58.931 38.462 0.00 0.00 34.67 0.86
135 136 5.901276 TCCCGTTTACTGAACCTCCTAATAT 59.099 40.000 0.00 0.00 34.67 1.28
136 137 5.271598 TCCCGTTTACTGAACCTCCTAATA 58.728 41.667 0.00 0.00 34.67 0.98
137 138 4.098894 TCCCGTTTACTGAACCTCCTAAT 58.901 43.478 0.00 0.00 34.67 1.73
138 139 3.509442 TCCCGTTTACTGAACCTCCTAA 58.491 45.455 0.00 0.00 34.67 2.69
139 140 3.173953 TCCCGTTTACTGAACCTCCTA 57.826 47.619 0.00 0.00 34.67 2.94
140 141 2.019807 TCCCGTTTACTGAACCTCCT 57.980 50.000 0.00 0.00 34.67 3.69
141 142 3.345508 AATCCCGTTTACTGAACCTCC 57.654 47.619 0.00 0.00 34.67 4.30
142 143 4.161001 TCCTAATCCCGTTTACTGAACCTC 59.839 45.833 0.00 0.00 34.67 3.85
143 144 4.098894 TCCTAATCCCGTTTACTGAACCT 58.901 43.478 0.00 0.00 34.67 3.50
144 145 4.161001 TCTCCTAATCCCGTTTACTGAACC 59.839 45.833 0.00 0.00 34.67 3.62
145 146 5.334724 TCTCCTAATCCCGTTTACTGAAC 57.665 43.478 0.00 0.00 34.82 3.18
146 147 6.155565 TCAATCTCCTAATCCCGTTTACTGAA 59.844 38.462 0.00 0.00 0.00 3.02
147 148 5.659525 TCAATCTCCTAATCCCGTTTACTGA 59.340 40.000 0.00 0.00 0.00 3.41
148 149 5.914033 TCAATCTCCTAATCCCGTTTACTG 58.086 41.667 0.00 0.00 0.00 2.74
149 150 5.897824 TCTCAATCTCCTAATCCCGTTTACT 59.102 40.000 0.00 0.00 0.00 2.24
150 151 6.158023 TCTCAATCTCCTAATCCCGTTTAC 57.842 41.667 0.00 0.00 0.00 2.01
151 152 6.801718 TTCTCAATCTCCTAATCCCGTTTA 57.198 37.500 0.00 0.00 0.00 2.01
152 153 5.693769 TTCTCAATCTCCTAATCCCGTTT 57.306 39.130 0.00 0.00 0.00 3.60
153 154 5.693769 TTTCTCAATCTCCTAATCCCGTT 57.306 39.130 0.00 0.00 0.00 4.44
154 155 5.396884 CCTTTTCTCAATCTCCTAATCCCGT 60.397 44.000 0.00 0.00 0.00 5.28
155 156 5.059833 CCTTTTCTCAATCTCCTAATCCCG 58.940 45.833 0.00 0.00 0.00 5.14
156 157 4.824537 GCCTTTTCTCAATCTCCTAATCCC 59.175 45.833 0.00 0.00 0.00 3.85
157 158 5.530543 CAGCCTTTTCTCAATCTCCTAATCC 59.469 44.000 0.00 0.00 0.00 3.01
158 159 6.352516 TCAGCCTTTTCTCAATCTCCTAATC 58.647 40.000 0.00 0.00 0.00 1.75
159 160 6.319048 TCAGCCTTTTCTCAATCTCCTAAT 57.681 37.500 0.00 0.00 0.00 1.73
160 161 5.738909 CTCAGCCTTTTCTCAATCTCCTAA 58.261 41.667 0.00 0.00 0.00 2.69
161 162 4.383552 GCTCAGCCTTTTCTCAATCTCCTA 60.384 45.833 0.00 0.00 0.00 2.94
162 163 3.621958 GCTCAGCCTTTTCTCAATCTCCT 60.622 47.826 0.00 0.00 0.00 3.69
163 164 2.682352 GCTCAGCCTTTTCTCAATCTCC 59.318 50.000 0.00 0.00 0.00 3.71
164 165 2.682352 GGCTCAGCCTTTTCTCAATCTC 59.318 50.000 9.09 0.00 46.69 2.75
165 166 2.720915 GGCTCAGCCTTTTCTCAATCT 58.279 47.619 9.09 0.00 46.69 2.40
177 178 4.475135 GAGGGGTTCGGCTCAGCC 62.475 72.222 5.22 5.22 46.75 4.85
178 179 3.378399 GAGAGGGGTTCGGCTCAGC 62.378 68.421 0.00 0.00 0.00 4.26
179 180 2.726351 GGAGAGGGGTTCGGCTCAG 61.726 68.421 0.00 0.00 0.00 3.35
180 181 2.683933 GGAGAGGGGTTCGGCTCA 60.684 66.667 0.00 0.00 0.00 4.26
181 182 3.471806 GGGAGAGGGGTTCGGCTC 61.472 72.222 0.00 0.00 0.00 4.70
184 185 2.764547 GAGGGGAGAGGGGTTCGG 60.765 72.222 0.00 0.00 0.00 4.30
185 186 2.764547 GGAGGGGAGAGGGGTTCG 60.765 72.222 0.00 0.00 0.00 3.95
186 187 2.764547 CGGAGGGGAGAGGGGTTC 60.765 72.222 0.00 0.00 0.00 3.62
192 193 3.765257 ATCTGGGCGGAGGGGAGAG 62.765 68.421 0.00 0.00 0.00 3.20
193 194 3.758133 GATCTGGGCGGAGGGGAGA 62.758 68.421 0.00 0.00 0.00 3.71
194 195 3.237741 GATCTGGGCGGAGGGGAG 61.238 72.222 0.00 0.00 0.00 4.30
198 199 4.292178 GAGCGATCTGGGCGGAGG 62.292 72.222 0.00 0.00 35.00 4.30
199 200 4.637489 CGAGCGATCTGGGCGGAG 62.637 72.222 0.00 0.00 35.00 4.63
203 204 3.839642 GAGAGCGAGCGATCTGGGC 62.840 68.421 15.79 0.00 41.31 5.36
204 205 2.334653 GAGAGCGAGCGATCTGGG 59.665 66.667 15.79 0.00 41.31 4.45
205 206 0.886938 TAGGAGAGCGAGCGATCTGG 60.887 60.000 15.79 0.00 41.31 3.86
206 207 0.516877 CTAGGAGAGCGAGCGATCTG 59.483 60.000 15.79 0.00 41.31 2.90
207 208 0.107831 ACTAGGAGAGCGAGCGATCT 59.892 55.000 10.66 10.66 44.17 2.75
208 209 0.237235 CACTAGGAGAGCGAGCGATC 59.763 60.000 0.00 0.00 0.00 3.69
209 210 0.464735 ACACTAGGAGAGCGAGCGAT 60.465 55.000 0.00 0.00 0.00 4.58
210 211 0.177373 TACACTAGGAGAGCGAGCGA 59.823 55.000 0.00 0.00 0.00 4.93
211 212 0.584396 CTACACTAGGAGAGCGAGCG 59.416 60.000 0.00 0.00 0.00 5.03
212 213 1.871039 CTCTACACTAGGAGAGCGAGC 59.129 57.143 5.85 0.00 33.25 5.03
213 214 2.869801 CACTCTACACTAGGAGAGCGAG 59.130 54.545 15.00 6.52 42.56 5.03
214 215 2.420269 CCACTCTACACTAGGAGAGCGA 60.420 54.545 15.00 0.00 42.56 4.93
215 216 1.944024 CCACTCTACACTAGGAGAGCG 59.056 57.143 15.00 8.36 42.56 5.03
216 217 3.284793 TCCACTCTACACTAGGAGAGC 57.715 52.381 15.00 0.00 42.56 4.09
217 218 5.712917 ACTTTTCCACTCTACACTAGGAGAG 59.287 44.000 13.97 13.97 44.07 3.20
218 219 5.642165 ACTTTTCCACTCTACACTAGGAGA 58.358 41.667 0.00 0.00 34.11 3.71
219 220 5.392165 CGACTTTTCCACTCTACACTAGGAG 60.392 48.000 0.00 0.00 35.86 3.69
220 221 4.458295 CGACTTTTCCACTCTACACTAGGA 59.542 45.833 0.00 0.00 0.00 2.94
221 222 4.380655 CCGACTTTTCCACTCTACACTAGG 60.381 50.000 0.00 0.00 0.00 3.02
222 223 4.380655 CCCGACTTTTCCACTCTACACTAG 60.381 50.000 0.00 0.00 0.00 2.57
223 224 3.508793 CCCGACTTTTCCACTCTACACTA 59.491 47.826 0.00 0.00 0.00 2.74
224 225 2.299297 CCCGACTTTTCCACTCTACACT 59.701 50.000 0.00 0.00 0.00 3.55
225 226 2.685100 CCCGACTTTTCCACTCTACAC 58.315 52.381 0.00 0.00 0.00 2.90
226 227 1.001633 GCCCGACTTTTCCACTCTACA 59.998 52.381 0.00 0.00 0.00 2.74
227 228 1.275573 AGCCCGACTTTTCCACTCTAC 59.724 52.381 0.00 0.00 0.00 2.59
228 229 1.549170 GAGCCCGACTTTTCCACTCTA 59.451 52.381 0.00 0.00 0.00 2.43
229 230 0.321996 GAGCCCGACTTTTCCACTCT 59.678 55.000 0.00 0.00 0.00 3.24
230 231 0.673956 GGAGCCCGACTTTTCCACTC 60.674 60.000 0.00 0.00 0.00 3.51
231 232 1.375326 GGAGCCCGACTTTTCCACT 59.625 57.895 0.00 0.00 0.00 4.00
232 233 0.536460 TTGGAGCCCGACTTTTCCAC 60.536 55.000 0.00 0.00 39.32 4.02
233 234 0.183971 TTTGGAGCCCGACTTTTCCA 59.816 50.000 0.00 0.00 37.92 3.53
234 235 1.324383 TTTTGGAGCCCGACTTTTCC 58.676 50.000 0.00 0.00 0.00 3.13
235 236 2.094700 GGATTTTGGAGCCCGACTTTTC 60.095 50.000 0.00 0.00 0.00 2.29
236 237 1.893137 GGATTTTGGAGCCCGACTTTT 59.107 47.619 0.00 0.00 0.00 2.27
237 238 1.545841 GGATTTTGGAGCCCGACTTT 58.454 50.000 0.00 0.00 0.00 2.66
238 239 0.323451 GGGATTTTGGAGCCCGACTT 60.323 55.000 0.00 0.00 31.06 3.01
239 240 1.303282 GGGATTTTGGAGCCCGACT 59.697 57.895 0.00 0.00 31.06 4.18
240 241 1.753078 GGGGATTTTGGAGCCCGAC 60.753 63.158 0.00 0.00 42.99 4.79
241 242 2.210144 CTGGGGATTTTGGAGCCCGA 62.210 60.000 0.00 0.00 42.99 5.14
242 243 1.754234 CTGGGGATTTTGGAGCCCG 60.754 63.158 0.00 0.00 42.99 6.13
243 244 0.684479 GACTGGGGATTTTGGAGCCC 60.684 60.000 0.00 0.00 41.28 5.19
244 245 0.332972 AGACTGGGGATTTTGGAGCC 59.667 55.000 0.00 0.00 0.00 4.70
245 246 1.683319 GGAGACTGGGGATTTTGGAGC 60.683 57.143 0.00 0.00 0.00 4.70
246 247 1.918957 AGGAGACTGGGGATTTTGGAG 59.081 52.381 0.00 0.00 41.13 3.86
247 248 1.916181 GAGGAGACTGGGGATTTTGGA 59.084 52.381 0.00 0.00 44.43 3.53
248 249 1.064389 GGAGGAGACTGGGGATTTTGG 60.064 57.143 0.00 0.00 44.43 3.28
249 250 1.635487 TGGAGGAGACTGGGGATTTTG 59.365 52.381 0.00 0.00 44.43 2.44
250 251 1.918957 CTGGAGGAGACTGGGGATTTT 59.081 52.381 0.00 0.00 44.43 1.82
251 252 1.589414 CTGGAGGAGACTGGGGATTT 58.411 55.000 0.00 0.00 44.43 2.17
252 253 0.985490 GCTGGAGGAGACTGGGGATT 60.985 60.000 0.00 0.00 44.43 3.01
253 254 1.383803 GCTGGAGGAGACTGGGGAT 60.384 63.158 0.00 0.00 44.43 3.85
254 255 2.039624 GCTGGAGGAGACTGGGGA 59.960 66.667 0.00 0.00 44.43 4.81
255 256 3.086600 GGCTGGAGGAGACTGGGG 61.087 72.222 0.00 0.00 44.43 4.96
256 257 1.277580 AATGGCTGGAGGAGACTGGG 61.278 60.000 0.00 0.00 44.43 4.45
257 258 0.179936 GAATGGCTGGAGGAGACTGG 59.820 60.000 0.00 0.00 44.43 4.00
258 259 0.179936 GGAATGGCTGGAGGAGACTG 59.820 60.000 0.00 0.00 44.43 3.51
260 261 0.179936 CTGGAATGGCTGGAGGAGAC 59.820 60.000 0.00 0.00 0.00 3.36
261 262 0.984961 CCTGGAATGGCTGGAGGAGA 60.985 60.000 0.00 0.00 0.00 3.71
262 263 1.277580 ACCTGGAATGGCTGGAGGAG 61.278 60.000 0.00 0.00 0.00 3.69
263 264 0.846427 AACCTGGAATGGCTGGAGGA 60.846 55.000 0.00 0.00 0.00 3.71
264 265 0.394899 GAACCTGGAATGGCTGGAGG 60.395 60.000 0.00 0.00 0.00 4.30
342 355 1.810532 GAGCTCGTCCGGAATCACT 59.189 57.895 5.23 0.97 0.00 3.41
379 392 2.675772 GTCGTCGGGTGGGAGACT 60.676 66.667 0.00 0.00 35.38 3.24
454 467 4.144703 GAAGGCCGGACGGGAGAC 62.145 72.222 5.05 0.00 38.47 3.36
508 521 2.755469 GGTACGTAGCCCGGTCCA 60.755 66.667 13.80 0.00 42.24 4.02
509 522 3.531207 GGGTACGTAGCCCGGTCC 61.531 72.222 29.48 9.86 42.24 4.46
523 562 0.035056 GTATGAAGCTGTGCTGGGGT 60.035 55.000 0.00 0.00 39.62 4.95
542 593 2.120909 GCGATGGTGGATTGGTGGG 61.121 63.158 0.00 0.00 0.00 4.61
543 594 2.120909 GGCGATGGTGGATTGGTGG 61.121 63.158 0.00 0.00 0.00 4.61
544 595 1.077501 AGGCGATGGTGGATTGGTG 60.078 57.895 0.00 0.00 0.00 4.17
545 596 1.224592 GAGGCGATGGTGGATTGGT 59.775 57.895 0.00 0.00 0.00 3.67
546 597 1.889105 CGAGGCGATGGTGGATTGG 60.889 63.158 0.00 0.00 0.00 3.16
547 598 1.153369 ACGAGGCGATGGTGGATTG 60.153 57.895 0.00 0.00 0.00 2.67
548 599 1.144057 GACGAGGCGATGGTGGATT 59.856 57.895 0.00 0.00 0.00 3.01
549 600 2.797278 GGACGAGGCGATGGTGGAT 61.797 63.158 0.00 0.00 0.00 3.41
713 785 1.594293 CTCCACTCAAACGCCACGT 60.594 57.895 0.00 0.00 43.97 4.49
731 806 1.272781 CGCAGTCAAGTAGCTGTAGC 58.727 55.000 0.00 0.00 42.49 3.58
732 807 1.914634 CCGCAGTCAAGTAGCTGTAG 58.085 55.000 0.00 0.00 35.33 2.74
733 808 0.108804 GCCGCAGTCAAGTAGCTGTA 60.109 55.000 0.00 0.00 35.33 2.74
734 809 1.374758 GCCGCAGTCAAGTAGCTGT 60.375 57.895 0.00 0.00 35.33 4.40
874 964 1.740296 AGTACACGGATGCCAACGC 60.740 57.895 0.00 0.00 0.00 4.84
991 1090 4.908601 TGGTGTAGAACATGAAGTGGAT 57.091 40.909 0.00 0.00 0.00 3.41
994 1093 6.873605 TCATAGTTGGTGTAGAACATGAAGTG 59.126 38.462 0.00 0.00 0.00 3.16
1045 1146 3.264193 TGCCTTGACAAGTCATACTCCAT 59.736 43.478 14.03 0.00 39.64 3.41
1072 1173 6.461788 GGTGGCCTAAAAGTAAACACATTCAA 60.462 38.462 3.32 0.00 0.00 2.69
1132 1251 4.736896 GCCCAGTCCACCGTCGTC 62.737 72.222 0.00 0.00 0.00 4.20
1134 1253 2.233605 TTATGCCCAGTCCACCGTCG 62.234 60.000 0.00 0.00 0.00 5.12
1160 1279 1.308069 TTTGAGCTGCGGATCCAAGC 61.308 55.000 23.11 23.11 0.00 4.01
1257 1376 2.010145 TCAATCGAGCACTAGTTGGC 57.990 50.000 0.00 0.00 0.00 4.52
1382 1510 0.036952 ATCACTGCACACCTTCCTCG 60.037 55.000 0.00 0.00 0.00 4.63
1425 1565 2.300437 AGGAGTGTAGAAGCTGACAACC 59.700 50.000 0.00 0.38 0.00 3.77
1512 1688 2.949142 TGTGCGCGATCTACTGTTTTA 58.051 42.857 12.10 0.00 0.00 1.52
1535 1711 1.973812 GACCCCTTGCTCAACAGCC 60.974 63.158 0.00 0.00 46.26 4.85
1606 1782 3.054361 GGGACTCACCTGATATTGTGGTT 60.054 47.826 0.00 0.00 38.98 3.67
1640 1824 6.353323 ACGAATGATGTGTGGTATGGAATAA 58.647 36.000 0.00 0.00 0.00 1.40
1649 1833 3.904800 TCCATACGAATGATGTGTGGT 57.095 42.857 8.44 0.00 45.62 4.16
1676 1863 7.410120 AACCATTGAGAAGTTTCTTTTGAGT 57.590 32.000 0.00 0.00 37.73 3.41
1697 1889 2.494870 TGACCCTAAAGAGTAGCGAACC 59.505 50.000 0.00 0.00 0.00 3.62
1703 1895 4.508662 CAAAGGCTGACCCTAAAGAGTAG 58.491 47.826 0.00 0.00 45.62 2.57
1727 1921 2.488347 GCAACTAAGGACACAGGGGAAA 60.488 50.000 0.00 0.00 0.00 3.13
1730 1924 0.693049 AGCAACTAAGGACACAGGGG 59.307 55.000 0.00 0.00 0.00 4.79
1780 2010 0.036306 CGCCTGGTAACCTCCTTGTT 59.964 55.000 0.00 0.00 0.00 2.83
1827 2057 2.029666 ACTTTCGTGCTCGCAGCT 59.970 55.556 2.69 0.00 42.97 4.24
2021 2567 6.108015 TCTACCATACCAATAAACGGAACAC 58.892 40.000 0.00 0.00 0.00 3.32
2025 2571 5.302568 ACGATCTACCATACCAATAAACGGA 59.697 40.000 0.00 0.00 0.00 4.69
2138 2728 4.024893 CGCTGCTACAATTATTCCATCGTT 60.025 41.667 0.00 0.00 0.00 3.85
2272 2866 3.631686 TGTTTGTTGAGCATGTTAGCACT 59.368 39.130 0.00 0.00 36.85 4.40
2300 2894 2.200373 AACTTTCGGTAGCAAGGCAT 57.800 45.000 0.00 0.00 0.00 4.40
2376 2971 1.329906 CTCACGCCATCATCTTTGCTC 59.670 52.381 0.00 0.00 0.00 4.26
2410 3005 2.357009 GAGCACCCTCAACATTGCTATG 59.643 50.000 6.59 6.59 45.32 2.23
2448 3043 7.755373 TGAGAAACAGTACATTATTCAGACTCG 59.245 37.037 0.00 0.00 0.00 4.18
2469 3064 4.263068 GGTCTCAGGAAGGAACAATGAGAA 60.263 45.833 4.88 0.00 45.71 2.87
2646 3243 5.403558 TGACAGGAGTATAGGGAGAATCA 57.596 43.478 0.00 0.00 36.25 2.57
2652 3249 4.536295 TCACATGACAGGAGTATAGGGA 57.464 45.455 0.00 0.00 0.00 4.20
2661 3258 1.134521 GCGGGTTATCACATGACAGGA 60.135 52.381 0.00 0.00 0.00 3.86
2662 3259 1.299541 GCGGGTTATCACATGACAGG 58.700 55.000 0.00 0.00 0.00 4.00
2663 3260 2.022764 TGCGGGTTATCACATGACAG 57.977 50.000 0.00 0.00 0.00 3.51
2664 3261 2.093235 TCATGCGGGTTATCACATGACA 60.093 45.455 0.00 0.00 42.86 3.58
2667 3264 3.128415 TGTTTCATGCGGGTTATCACATG 59.872 43.478 0.00 0.00 40.97 3.21
2668 3265 3.351740 TGTTTCATGCGGGTTATCACAT 58.648 40.909 0.00 0.00 0.00 3.21
2669 3266 2.784347 TGTTTCATGCGGGTTATCACA 58.216 42.857 0.00 0.00 0.00 3.58
2670 3267 3.840890 TTGTTTCATGCGGGTTATCAC 57.159 42.857 0.00 0.00 0.00 3.06
2671 3268 3.130164 CCATTGTTTCATGCGGGTTATCA 59.870 43.478 0.00 0.00 0.00 2.15
2672 3269 3.130340 ACCATTGTTTCATGCGGGTTATC 59.870 43.478 0.00 0.00 0.00 1.75
2684 3281 4.142600 GCAGGAGTACATGACCATTGTTTC 60.143 45.833 0.00 0.00 0.00 2.78
2762 3359 4.921470 ACAGAACGATGGTGTAAATTCG 57.079 40.909 0.00 0.00 37.60 3.34
2777 3374 8.669243 CAGAAGTTAAATGATCCCTTACAGAAC 58.331 37.037 0.00 0.00 0.00 3.01
2790 3388 8.918202 AGTAACAACCATCAGAAGTTAAATGA 57.082 30.769 0.00 0.00 0.00 2.57
2803 3401 4.894784 TCCAGAACTGAGTAACAACCATC 58.105 43.478 3.19 0.00 0.00 3.51
2804 3402 4.348168 ACTCCAGAACTGAGTAACAACCAT 59.652 41.667 3.19 0.00 0.00 3.55
2818 3419 7.662258 TGCTGTCTACTATCTATACTCCAGAAC 59.338 40.741 0.00 0.00 0.00 3.01
2854 4277 8.299570 ACCAAGCATACTATAAAAGCATATTGC 58.700 33.333 0.00 0.00 45.46 3.56
2884 4313 5.070446 ACGCTTGAGATTATGATCTAACCCA 59.930 40.000 0.00 0.00 42.66 4.51
2885 4314 5.406780 CACGCTTGAGATTATGATCTAACCC 59.593 44.000 0.00 0.00 42.66 4.11
2898 4327 2.627515 ATGGCATACACGCTTGAGAT 57.372 45.000 0.00 0.00 0.00 2.75
2900 4329 5.170748 TGATATATGGCATACACGCTTGAG 58.829 41.667 9.83 0.00 0.00 3.02
3059 4491 5.720371 TTTATGCAGCAAAACCTACACAT 57.280 34.783 0.00 0.00 0.00 3.21
3100 4543 5.163794 ACTGCGTAAATTTGTAGTACATGGC 60.164 40.000 3.28 1.59 0.00 4.40
3101 4544 6.417191 ACTGCGTAAATTTGTAGTACATGG 57.583 37.500 3.28 0.00 0.00 3.66
3212 7170 1.151668 GATACTCATGCATGCCCGTC 58.848 55.000 22.25 12.90 0.00 4.79
3289 7247 3.181429 TGGGCATTTGGGATCTATTCCTC 60.181 47.826 0.00 0.00 44.75 3.71
3297 7255 3.033184 TCTTCAATGGGCATTTGGGATC 58.967 45.455 0.00 0.00 0.00 3.36
3336 7294 4.318689 GCATTTTTAACTTGCGCACAACAT 60.319 37.500 11.12 0.00 0.00 2.71
3339 7305 3.850657 GCATTTTTAACTTGCGCACAA 57.149 38.095 11.12 0.00 0.00 3.33
3360 7326 4.962155 TCTCTGGAGAAAAAGTGAAGGAC 58.038 43.478 0.00 0.00 33.91 3.85
3376 7342 9.730705 TTGCTATTATTTCAATATCCTCTCTGG 57.269 33.333 0.00 0.00 37.10 3.86
3394 7367 5.083122 CCTCTCCTCATCCTCTTGCTATTA 58.917 45.833 0.00 0.00 0.00 0.98
3397 7370 2.515853 TCCTCTCCTCATCCTCTTGCTA 59.484 50.000 0.00 0.00 0.00 3.49
3431 7404 4.483311 CTTCTTTGCATCCTTCTTTGCTC 58.517 43.478 0.00 0.00 39.60 4.26
3432 7405 3.257624 CCTTCTTTGCATCCTTCTTTGCT 59.742 43.478 0.00 0.00 39.60 3.91
3480 7453 7.477144 AAACTAATTGTAAAAAGCAGGCAAC 57.523 32.000 0.00 0.00 0.00 4.17
3528 7501 2.094675 CAGCCCACTGGACTATTTTGG 58.905 52.381 0.00 0.00 40.48 3.28
3627 8935 0.604578 ACAGCAACAACATCATGGGC 59.395 50.000 0.00 0.00 0.00 5.36
3670 8987 1.065854 AGATACCACCTGAAGCAGCAC 60.066 52.381 0.00 0.00 0.00 4.40
3761 9078 1.080705 GAGTTGTGTCGGCGCTAGT 60.081 57.895 7.64 0.00 0.00 2.57
3798 9116 4.664150 TTTCTTTTCAAAATCCGCACCT 57.336 36.364 0.00 0.00 0.00 4.00
3799 9117 5.236263 ACATTTTCTTTTCAAAATCCGCACC 59.764 36.000 0.00 0.00 34.37 5.01
3803 9121 6.354102 CGCAAACATTTTCTTTTCAAAATCCG 59.646 34.615 0.00 0.00 34.37 4.18
3804 9122 7.405769 TCGCAAACATTTTCTTTTCAAAATCC 58.594 30.769 0.00 0.00 34.37 3.01
3827 9145 1.737838 TGTTAAGCTCCCTTGCATCG 58.262 50.000 0.00 0.00 34.99 3.84
3837 9155 2.677836 TGATCGCCACAATGTTAAGCTC 59.322 45.455 0.00 0.00 0.00 4.09
3845 9163 1.931841 CAGAGTCTGATCGCCACAATG 59.068 52.381 15.46 0.00 32.44 2.82
3851 9169 2.017782 TCACTACAGAGTCTGATCGCC 58.982 52.381 26.86 0.00 35.18 5.54
3861 9179 2.824341 AGGTAACCCGTTCACTACAGAG 59.176 50.000 0.00 0.00 35.12 3.35
3863 9181 3.243975 ACAAGGTAACCCGTTCACTACAG 60.244 47.826 0.00 0.00 35.12 2.74
3864 9182 2.699846 ACAAGGTAACCCGTTCACTACA 59.300 45.455 0.00 0.00 35.12 2.74
3865 9183 3.391506 ACAAGGTAACCCGTTCACTAC 57.608 47.619 0.00 0.00 35.12 2.73
3877 9195 3.806380 TCGCCAGTTTACAACAAGGTAA 58.194 40.909 0.00 0.00 33.13 2.85
3929 9247 9.750125 CTTCTTGCACATAGTTATCATACAGTA 57.250 33.333 0.00 0.00 0.00 2.74
3930 9248 8.478066 TCTTCTTGCACATAGTTATCATACAGT 58.522 33.333 0.00 0.00 0.00 3.55
3931 9249 8.759641 GTCTTCTTGCACATAGTTATCATACAG 58.240 37.037 0.00 0.00 0.00 2.74
3932 9250 8.257306 TGTCTTCTTGCACATAGTTATCATACA 58.743 33.333 0.00 0.00 0.00 2.29
3933 9251 8.648557 TGTCTTCTTGCACATAGTTATCATAC 57.351 34.615 0.00 0.00 0.00 2.39
4024 9387 5.350640 GTCCTTTCTACGAAACAATTCCGAT 59.649 40.000 0.00 0.00 31.52 4.18
4063 9426 9.155975 GCTACAATGCATATGCTAGTATTTACT 57.844 33.333 27.13 7.12 42.66 2.24
4064 9427 9.155975 AGCTACAATGCATATGCTAGTATTTAC 57.844 33.333 27.13 14.89 42.66 2.01
4066 9429 9.725019 TTAGCTACAATGCATATGCTAGTATTT 57.275 29.630 27.13 17.26 42.66 1.40
4067 9430 9.896645 ATTAGCTACAATGCATATGCTAGTATT 57.103 29.630 27.13 15.78 42.66 1.89
4068 9431 9.896645 AATTAGCTACAATGCATATGCTAGTAT 57.103 29.630 27.13 10.61 42.66 2.12
4069 9432 9.725019 AAATTAGCTACAATGCATATGCTAGTA 57.275 29.630 27.13 22.35 42.66 1.82
4070 9433 8.509690 CAAATTAGCTACAATGCATATGCTAGT 58.490 33.333 27.13 22.42 42.66 2.57
4071 9434 7.966753 CCAAATTAGCTACAATGCATATGCTAG 59.033 37.037 27.13 20.04 42.66 3.42
4072 9435 7.665145 TCCAAATTAGCTACAATGCATATGCTA 59.335 33.333 27.13 14.66 42.66 3.49
4095 9475 0.253044 GAATGCACTACCTGCCTCCA 59.747 55.000 0.00 0.00 46.51 3.86
4096 9476 0.543749 AGAATGCACTACCTGCCTCC 59.456 55.000 0.00 0.00 46.51 4.30
4153 9574 9.358872 GAAAATCCCTTCAGCAAAACTAATTAG 57.641 33.333 11.05 11.05 0.00 1.73
4167 9589 4.522789 GCTGTGTAAAGGAAAATCCCTTCA 59.477 41.667 0.00 0.00 45.30 3.02
4251 9677 4.811498 TCTACTCCCTCCGATCCAAATTA 58.189 43.478 0.00 0.00 0.00 1.40
4260 9686 6.801718 TTAAAATGATTCTACTCCCTCCGA 57.198 37.500 0.00 0.00 0.00 4.55
4272 9698 7.022979 GCCTGCCAAACAAATTAAAATGATTC 58.977 34.615 0.00 0.00 0.00 2.52
4358 9791 2.755650 GGAAAGTGAGCTTGAAGACGA 58.244 47.619 0.00 0.00 34.71 4.20
4359 9792 1.457303 CGGAAAGTGAGCTTGAAGACG 59.543 52.381 0.00 0.00 34.71 4.18
4360 9793 1.801178 CCGGAAAGTGAGCTTGAAGAC 59.199 52.381 0.00 0.00 34.71 3.01
4361 9794 1.878102 GCCGGAAAGTGAGCTTGAAGA 60.878 52.381 5.05 0.00 34.71 2.87
4362 9795 0.519077 GCCGGAAAGTGAGCTTGAAG 59.481 55.000 5.05 0.00 34.71 3.02
4363 9796 0.108585 AGCCGGAAAGTGAGCTTGAA 59.891 50.000 5.05 0.00 34.71 2.69
4364 9797 0.108585 AAGCCGGAAAGTGAGCTTGA 59.891 50.000 5.05 0.00 43.63 3.02
4365 9798 0.519077 GAAGCCGGAAAGTGAGCTTG 59.481 55.000 5.05 0.00 45.20 4.01
4367 9800 0.321122 CTGAAGCCGGAAAGTGAGCT 60.321 55.000 5.05 0.00 37.10 4.09
4368 9801 1.916697 GCTGAAGCCGGAAAGTGAGC 61.917 60.000 5.05 0.00 34.31 4.26
4369 9802 0.321122 AGCTGAAGCCGGAAAGTGAG 60.321 55.000 5.05 0.00 43.38 3.51
4370 9803 0.320771 GAGCTGAAGCCGGAAAGTGA 60.321 55.000 5.05 0.00 43.38 3.41
4371 9804 1.301677 GGAGCTGAAGCCGGAAAGTG 61.302 60.000 5.05 0.00 43.38 3.16
4372 9805 1.003233 GGAGCTGAAGCCGGAAAGT 60.003 57.895 5.05 0.00 43.38 2.66
4373 9806 1.003355 TGGAGCTGAAGCCGGAAAG 60.003 57.895 5.05 0.00 43.38 2.62
4374 9807 1.302511 GTGGAGCTGAAGCCGGAAA 60.303 57.895 5.05 0.00 43.38 3.13
4375 9808 2.347490 GTGGAGCTGAAGCCGGAA 59.653 61.111 5.05 0.00 43.38 4.30
4376 9809 2.922503 TGTGGAGCTGAAGCCGGA 60.923 61.111 5.05 0.00 43.38 5.14
4377 9810 2.743928 GTGTGGAGCTGAAGCCGG 60.744 66.667 0.00 0.00 43.38 6.13
4378 9811 3.114616 CGTGTGGAGCTGAAGCCG 61.115 66.667 0.00 0.00 43.38 5.52
4379 9812 2.743928 CCGTGTGGAGCTGAAGCC 60.744 66.667 0.00 0.00 43.38 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.