Multiple sequence alignment - TraesCS5B01G505300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G505300 | chr5B | 100.000 | 4802 | 0 | 0 | 1 | 4802 | 671125144 | 671129945 | 0.000000e+00 | 8868.0 |
1 | TraesCS5B01G505300 | chr5B | 92.173 | 626 | 42 | 6 | 1 | 623 | 411668317 | 411667696 | 0.000000e+00 | 878.0 |
2 | TraesCS5B01G505300 | chr5B | 91.038 | 636 | 39 | 13 | 1 | 624 | 289261955 | 289261326 | 0.000000e+00 | 843.0 |
3 | TraesCS5B01G505300 | chr5B | 92.495 | 493 | 35 | 2 | 4311 | 4802 | 546417617 | 546418108 | 0.000000e+00 | 704.0 |
4 | TraesCS5B01G505300 | chr5D | 96.217 | 1586 | 42 | 10 | 2733 | 4315 | 531895292 | 531896862 | 0.000000e+00 | 2580.0 |
5 | TraesCS5B01G505300 | chr5D | 95.204 | 980 | 34 | 6 | 789 | 1767 | 531892360 | 531893327 | 0.000000e+00 | 1537.0 |
6 | TraesCS5B01G505300 | chr5D | 86.486 | 851 | 63 | 17 | 2713 | 3534 | 531894463 | 531895290 | 0.000000e+00 | 887.0 |
7 | TraesCS5B01G505300 | chr5D | 84.514 | 381 | 40 | 13 | 1701 | 2067 | 531893357 | 531893732 | 4.570000e-95 | 359.0 |
8 | TraesCS5B01G505300 | chr5D | 85.401 | 274 | 27 | 8 | 2359 | 2631 | 531894203 | 531894464 | 6.120000e-69 | 272.0 |
9 | TraesCS5B01G505300 | chr4A | 94.171 | 1218 | 58 | 7 | 828 | 2043 | 640238013 | 640236807 | 0.000000e+00 | 1844.0 |
10 | TraesCS5B01G505300 | chr4A | 90.848 | 1344 | 95 | 20 | 2664 | 3994 | 640235850 | 640234522 | 0.000000e+00 | 1775.0 |
11 | TraesCS5B01G505300 | chr4A | 96.044 | 455 | 15 | 3 | 2214 | 2667 | 640236516 | 640236064 | 0.000000e+00 | 737.0 |
12 | TraesCS5B01G505300 | chr4A | 92.480 | 492 | 36 | 1 | 4311 | 4802 | 17397330 | 17397820 | 0.000000e+00 | 702.0 |
13 | TraesCS5B01G505300 | chr4A | 98.039 | 102 | 1 | 1 | 2051 | 2152 | 640236728 | 640236628 | 4.940000e-40 | 176.0 |
14 | TraesCS5B01G505300 | chr4A | 88.372 | 86 | 9 | 1 | 2630 | 2714 | 544057440 | 544057355 | 8.500000e-18 | 102.0 |
15 | TraesCS5B01G505300 | chr2B | 92.800 | 625 | 38 | 6 | 1 | 621 | 390359980 | 390360601 | 0.000000e+00 | 898.0 |
16 | TraesCS5B01G505300 | chr2B | 89.623 | 636 | 44 | 14 | 1 | 620 | 691001915 | 691002544 | 0.000000e+00 | 789.0 |
17 | TraesCS5B01G505300 | chr2A | 92.013 | 626 | 41 | 8 | 1 | 620 | 43468226 | 43468848 | 0.000000e+00 | 870.0 |
18 | TraesCS5B01G505300 | chr2A | 94.382 | 89 | 5 | 0 | 4227 | 4315 | 707998354 | 707998442 | 2.330000e-28 | 137.0 |
19 | TraesCS5B01G505300 | chr3B | 91.680 | 625 | 43 | 7 | 1 | 620 | 90123948 | 90124568 | 0.000000e+00 | 857.0 |
20 | TraesCS5B01G505300 | chr3B | 90.287 | 628 | 44 | 13 | 1 | 620 | 754973259 | 754972641 | 0.000000e+00 | 806.0 |
21 | TraesCS5B01G505300 | chr3B | 92.480 | 492 | 36 | 1 | 4311 | 4802 | 378693403 | 378692913 | 0.000000e+00 | 702.0 |
22 | TraesCS5B01G505300 | chr3B | 93.478 | 92 | 6 | 0 | 4227 | 4318 | 378693547 | 378693456 | 2.330000e-28 | 137.0 |
23 | TraesCS5B01G505300 | chr3B | 88.372 | 86 | 7 | 3 | 2631 | 2714 | 740890330 | 740890246 | 3.060000e-17 | 100.0 |
24 | TraesCS5B01G505300 | chr1B | 91.080 | 639 | 34 | 20 | 1 | 622 | 558520841 | 558521473 | 0.000000e+00 | 843.0 |
25 | TraesCS5B01G505300 | chr1B | 90.461 | 629 | 44 | 14 | 1 | 621 | 40817930 | 40818550 | 0.000000e+00 | 815.0 |
26 | TraesCS5B01G505300 | chrUn | 92.886 | 492 | 34 | 1 | 4311 | 4802 | 46153889 | 46154379 | 0.000000e+00 | 713.0 |
27 | TraesCS5B01G505300 | chrUn | 94.382 | 89 | 5 | 0 | 4227 | 4315 | 46153745 | 46153833 | 2.330000e-28 | 137.0 |
28 | TraesCS5B01G505300 | chrUn | 94.545 | 55 | 3 | 0 | 2630 | 2684 | 48473122 | 48473176 | 8.560000e-13 | 86.1 |
29 | TraesCS5B01G505300 | chr7A | 92.886 | 492 | 34 | 1 | 4311 | 4802 | 26771480 | 26770990 | 0.000000e+00 | 713.0 |
30 | TraesCS5B01G505300 | chr1D | 92.886 | 492 | 34 | 1 | 4311 | 4802 | 482919888 | 482919398 | 0.000000e+00 | 713.0 |
31 | TraesCS5B01G505300 | chr1D | 93.258 | 89 | 6 | 0 | 4227 | 4315 | 482920032 | 482919944 | 1.080000e-26 | 132.0 |
32 | TraesCS5B01G505300 | chr3A | 92.668 | 491 | 36 | 0 | 4312 | 4802 | 719287616 | 719287126 | 0.000000e+00 | 708.0 |
33 | TraesCS5B01G505300 | chr3A | 94.382 | 89 | 5 | 0 | 4227 | 4315 | 455798997 | 455799085 | 2.330000e-28 | 137.0 |
34 | TraesCS5B01G505300 | chr4D | 92.480 | 492 | 36 | 1 | 4311 | 4802 | 498966739 | 498967229 | 0.000000e+00 | 702.0 |
35 | TraesCS5B01G505300 | chr4D | 94.382 | 89 | 5 | 0 | 4227 | 4315 | 498966595 | 498966683 | 2.330000e-28 | 137.0 |
36 | TraesCS5B01G505300 | chr4D | 88.000 | 100 | 10 | 2 | 2625 | 2722 | 98453264 | 98453165 | 3.040000e-22 | 117.0 |
37 | TraesCS5B01G505300 | chr3D | 91.886 | 493 | 38 | 2 | 4311 | 4802 | 20901491 | 20901982 | 0.000000e+00 | 688.0 |
38 | TraesCS5B01G505300 | chr6B | 93.258 | 89 | 6 | 0 | 4227 | 4315 | 428429 | 428517 | 1.080000e-26 | 132.0 |
39 | TraesCS5B01G505300 | chr6A | 93.258 | 89 | 6 | 0 | 4227 | 4315 | 558097808 | 558097896 | 1.080000e-26 | 132.0 |
40 | TraesCS5B01G505300 | chr2D | 90.805 | 87 | 7 | 1 | 2629 | 2714 | 406941740 | 406941826 | 1.090000e-21 | 115.0 |
41 | TraesCS5B01G505300 | chr2D | 90.476 | 63 | 6 | 0 | 2622 | 2684 | 535105561 | 535105623 | 3.080000e-12 | 84.2 |
42 | TraesCS5B01G505300 | chr2D | 79.389 | 131 | 11 | 10 | 2600 | 2714 | 535105699 | 535105569 | 1.430000e-10 | 78.7 |
43 | TraesCS5B01G505300 | chr2D | 94.737 | 38 | 1 | 1 | 739 | 776 | 638395737 | 638395701 | 1.870000e-04 | 58.4 |
44 | TraesCS5B01G505300 | chr6D | 84.444 | 90 | 11 | 3 | 2626 | 2714 | 413078327 | 413078240 | 8.560000e-13 | 86.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G505300 | chr5B | 671125144 | 671129945 | 4801 | False | 8868.0 | 8868 | 100.0000 | 1 | 4802 | 1 | chr5B.!!$F2 | 4801 |
1 | TraesCS5B01G505300 | chr5B | 411667696 | 411668317 | 621 | True | 878.0 | 878 | 92.1730 | 1 | 623 | 1 | chr5B.!!$R2 | 622 |
2 | TraesCS5B01G505300 | chr5B | 289261326 | 289261955 | 629 | True | 843.0 | 843 | 91.0380 | 1 | 624 | 1 | chr5B.!!$R1 | 623 |
3 | TraesCS5B01G505300 | chr5D | 531892360 | 531896862 | 4502 | False | 1127.0 | 2580 | 89.5644 | 789 | 4315 | 5 | chr5D.!!$F1 | 3526 |
4 | TraesCS5B01G505300 | chr4A | 640234522 | 640238013 | 3491 | True | 1133.0 | 1844 | 94.7755 | 828 | 3994 | 4 | chr4A.!!$R2 | 3166 |
5 | TraesCS5B01G505300 | chr2B | 390359980 | 390360601 | 621 | False | 898.0 | 898 | 92.8000 | 1 | 621 | 1 | chr2B.!!$F1 | 620 |
6 | TraesCS5B01G505300 | chr2B | 691001915 | 691002544 | 629 | False | 789.0 | 789 | 89.6230 | 1 | 620 | 1 | chr2B.!!$F2 | 619 |
7 | TraesCS5B01G505300 | chr2A | 43468226 | 43468848 | 622 | False | 870.0 | 870 | 92.0130 | 1 | 620 | 1 | chr2A.!!$F1 | 619 |
8 | TraesCS5B01G505300 | chr3B | 90123948 | 90124568 | 620 | False | 857.0 | 857 | 91.6800 | 1 | 620 | 1 | chr3B.!!$F1 | 619 |
9 | TraesCS5B01G505300 | chr3B | 754972641 | 754973259 | 618 | True | 806.0 | 806 | 90.2870 | 1 | 620 | 1 | chr3B.!!$R2 | 619 |
10 | TraesCS5B01G505300 | chr3B | 378692913 | 378693547 | 634 | True | 419.5 | 702 | 92.9790 | 4227 | 4802 | 2 | chr3B.!!$R3 | 575 |
11 | TraesCS5B01G505300 | chr1B | 558520841 | 558521473 | 632 | False | 843.0 | 843 | 91.0800 | 1 | 622 | 1 | chr1B.!!$F2 | 621 |
12 | TraesCS5B01G505300 | chr1B | 40817930 | 40818550 | 620 | False | 815.0 | 815 | 90.4610 | 1 | 621 | 1 | chr1B.!!$F1 | 620 |
13 | TraesCS5B01G505300 | chrUn | 46153745 | 46154379 | 634 | False | 425.0 | 713 | 93.6340 | 4227 | 4802 | 2 | chrUn.!!$F2 | 575 |
14 | TraesCS5B01G505300 | chr1D | 482919398 | 482920032 | 634 | True | 422.5 | 713 | 93.0720 | 4227 | 4802 | 2 | chr1D.!!$R1 | 575 |
15 | TraesCS5B01G505300 | chr4D | 498966595 | 498967229 | 634 | False | 419.5 | 702 | 93.4310 | 4227 | 4802 | 2 | chr4D.!!$F1 | 575 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
784 | 829 | 0.249741 | CGGTTTTGACACGAGGGAGT | 60.250 | 55.0 | 0.00 | 0.0 | 0.00 | 3.85 | F |
2157 | 2409 | 0.886563 | GGTTTGCAGCTGCTGATCTT | 59.113 | 50.0 | 36.61 | 0.0 | 42.66 | 2.40 | F |
2204 | 2726 | 0.104934 | GGAGGGGATCAGGCCTAAGA | 60.105 | 60.0 | 3.98 | 0.0 | 0.00 | 2.10 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2194 | 2716 | 0.179000 | AAGTCCGCATCTTAGGCCTG | 59.821 | 55.000 | 17.99 | 0.00 | 0.00 | 4.85 | R |
3003 | 4573 | 0.235926 | GTTTCTTGTGCACCGAGCTC | 59.764 | 55.000 | 15.69 | 2.73 | 45.94 | 4.09 | R |
4203 | 5810 | 1.139853 | GGAGAGGAGTTGCACCCTATG | 59.860 | 57.143 | 1.35 | 0.00 | 31.84 | 2.23 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
34 | 35 | 2.757868 | CCCTTGGAGTTGTTGTTGTTGA | 59.242 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
67 | 68 | 2.549282 | CGGGCGAAGTTGACAACG | 59.451 | 61.111 | 12.54 | 2.62 | 36.23 | 4.10 |
292 | 295 | 1.553690 | CGGAGGAGGTGGTGGTGATT | 61.554 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
294 | 297 | 0.693049 | GAGGAGGTGGTGGTGATTGT | 59.307 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
350 | 357 | 2.434884 | ACATGGCTCGGTCGCAAG | 60.435 | 61.111 | 0.00 | 0.00 | 0.00 | 4.01 |
422 | 430 | 7.778853 | TGTTACCATGTAAAGTAGTTTGGGAAA | 59.221 | 33.333 | 5.77 | 0.00 | 29.18 | 3.13 |
443 | 451 | 1.347320 | CGTAGAACCCTTTGTCTCGC | 58.653 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
466 | 476 | 3.531538 | CCGCGGTATATATTGAGGCAAT | 58.468 | 45.455 | 19.50 | 0.00 | 37.80 | 3.56 |
521 | 554 | 1.195115 | CAGGGGGAGATCGACAGAAA | 58.805 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
540 | 574 | 5.576384 | CAGAAAAGAAAGATCGACCAGAGAG | 59.424 | 44.000 | 0.00 | 0.00 | 0.00 | 3.20 |
614 | 659 | 9.860393 | ACCTCTCCTATCCCTATACAATAATTT | 57.140 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
630 | 675 | 8.587952 | ACAATAATTTTAACAACTCAAGCACC | 57.412 | 30.769 | 0.00 | 0.00 | 0.00 | 5.01 |
631 | 676 | 8.421002 | ACAATAATTTTAACAACTCAAGCACCT | 58.579 | 29.630 | 0.00 | 0.00 | 0.00 | 4.00 |
632 | 677 | 9.260002 | CAATAATTTTAACAACTCAAGCACCTT | 57.740 | 29.630 | 0.00 | 0.00 | 0.00 | 3.50 |
633 | 678 | 8.816640 | ATAATTTTAACAACTCAAGCACCTTG | 57.183 | 30.769 | 0.00 | 0.00 | 42.25 | 3.61 |
634 | 679 | 5.652994 | TTTTAACAACTCAAGCACCTTGT | 57.347 | 34.783 | 5.03 | 0.00 | 41.66 | 3.16 |
635 | 680 | 5.652994 | TTTAACAACTCAAGCACCTTGTT | 57.347 | 34.783 | 5.03 | 0.00 | 41.66 | 2.83 |
636 | 681 | 5.652994 | TTAACAACTCAAGCACCTTGTTT | 57.347 | 34.783 | 5.03 | 0.00 | 41.66 | 2.83 |
637 | 682 | 4.535526 | AACAACTCAAGCACCTTGTTTT | 57.464 | 36.364 | 5.03 | 0.00 | 41.66 | 2.43 |
638 | 683 | 3.848726 | ACAACTCAAGCACCTTGTTTTG | 58.151 | 40.909 | 14.17 | 14.17 | 41.66 | 2.44 |
639 | 684 | 3.258123 | ACAACTCAAGCACCTTGTTTTGT | 59.742 | 39.130 | 14.99 | 14.99 | 41.66 | 2.83 |
640 | 685 | 3.508744 | ACTCAAGCACCTTGTTTTGTG | 57.491 | 42.857 | 5.03 | 0.00 | 41.66 | 3.33 |
641 | 686 | 3.088532 | ACTCAAGCACCTTGTTTTGTGA | 58.911 | 40.909 | 5.03 | 0.00 | 41.66 | 3.58 |
642 | 687 | 3.701040 | ACTCAAGCACCTTGTTTTGTGAT | 59.299 | 39.130 | 5.03 | 0.00 | 41.66 | 3.06 |
643 | 688 | 4.202050 | ACTCAAGCACCTTGTTTTGTGATC | 60.202 | 41.667 | 5.03 | 0.00 | 41.66 | 2.92 |
644 | 689 | 3.698539 | TCAAGCACCTTGTTTTGTGATCA | 59.301 | 39.130 | 0.00 | 0.00 | 41.66 | 2.92 |
645 | 690 | 3.715628 | AGCACCTTGTTTTGTGATCAC | 57.284 | 42.857 | 19.27 | 19.27 | 34.37 | 3.06 |
646 | 691 | 3.023119 | AGCACCTTGTTTTGTGATCACA | 58.977 | 40.909 | 24.56 | 24.56 | 39.98 | 3.58 |
647 | 692 | 6.134675 | CAAGCACCTTGTTTTGTGATCACAA | 61.135 | 40.000 | 32.36 | 32.36 | 41.28 | 3.33 |
648 | 693 | 7.557364 | CAAGCACCTTGTTTTGTGATCACAAA | 61.557 | 38.462 | 37.97 | 37.97 | 44.54 | 2.83 |
661 | 706 | 7.202016 | TGTGATCACAAAAATGAGAAGGTAC | 57.798 | 36.000 | 26.02 | 0.00 | 38.56 | 3.34 |
662 | 707 | 6.998074 | TGTGATCACAAAAATGAGAAGGTACT | 59.002 | 34.615 | 26.02 | 0.00 | 38.54 | 2.73 |
663 | 708 | 7.502226 | TGTGATCACAAAAATGAGAAGGTACTT | 59.498 | 33.333 | 26.02 | 0.00 | 45.78 | 2.24 |
680 | 725 | 7.195374 | AGGTACTTGGTTTCAGCAATATAGA | 57.805 | 36.000 | 0.00 | 0.00 | 34.84 | 1.98 |
681 | 726 | 7.806180 | AGGTACTTGGTTTCAGCAATATAGAT | 58.194 | 34.615 | 0.00 | 0.00 | 34.84 | 1.98 |
682 | 727 | 7.716998 | AGGTACTTGGTTTCAGCAATATAGATG | 59.283 | 37.037 | 0.00 | 0.00 | 34.84 | 2.90 |
683 | 728 | 7.499232 | GGTACTTGGTTTCAGCAATATAGATGT | 59.501 | 37.037 | 0.00 | 0.00 | 34.84 | 3.06 |
684 | 729 | 7.559590 | ACTTGGTTTCAGCAATATAGATGTC | 57.440 | 36.000 | 0.00 | 0.00 | 34.84 | 3.06 |
685 | 730 | 7.112122 | ACTTGGTTTCAGCAATATAGATGTCA | 58.888 | 34.615 | 0.00 | 0.00 | 34.84 | 3.58 |
686 | 731 | 6.925610 | TGGTTTCAGCAATATAGATGTCAC | 57.074 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
687 | 732 | 6.413892 | TGGTTTCAGCAATATAGATGTCACA | 58.586 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
688 | 733 | 7.056006 | TGGTTTCAGCAATATAGATGTCACAT | 58.944 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
689 | 734 | 7.557358 | TGGTTTCAGCAATATAGATGTCACATT | 59.443 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
690 | 735 | 8.408601 | GGTTTCAGCAATATAGATGTCACATTT | 58.591 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
691 | 736 | 9.229784 | GTTTCAGCAATATAGATGTCACATTTG | 57.770 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
692 | 737 | 8.510243 | TTCAGCAATATAGATGTCACATTTGT | 57.490 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
693 | 738 | 8.510243 | TCAGCAATATAGATGTCACATTTGTT | 57.490 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
694 | 739 | 8.615211 | TCAGCAATATAGATGTCACATTTGTTC | 58.385 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
695 | 740 | 8.400186 | CAGCAATATAGATGTCACATTTGTTCA | 58.600 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
696 | 741 | 8.618677 | AGCAATATAGATGTCACATTTGTTCAG | 58.381 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
697 | 742 | 8.400947 | GCAATATAGATGTCACATTTGTTCAGT | 58.599 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
700 | 745 | 7.849804 | ATAGATGTCACATTTGTTCAGTACC | 57.150 | 36.000 | 0.00 | 0.00 | 0.00 | 3.34 |
701 | 746 | 5.620206 | AGATGTCACATTTGTTCAGTACCA | 58.380 | 37.500 | 0.00 | 0.00 | 0.00 | 3.25 |
702 | 747 | 6.061441 | AGATGTCACATTTGTTCAGTACCAA | 58.939 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
703 | 748 | 6.716628 | AGATGTCACATTTGTTCAGTACCAAT | 59.283 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
704 | 749 | 6.312399 | TGTCACATTTGTTCAGTACCAATC | 57.688 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
705 | 750 | 5.240623 | TGTCACATTTGTTCAGTACCAATCC | 59.759 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
706 | 751 | 5.473504 | GTCACATTTGTTCAGTACCAATCCT | 59.526 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
707 | 752 | 5.705441 | TCACATTTGTTCAGTACCAATCCTC | 59.295 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
708 | 753 | 5.707298 | CACATTTGTTCAGTACCAATCCTCT | 59.293 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
709 | 754 | 6.207417 | CACATTTGTTCAGTACCAATCCTCTT | 59.793 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
710 | 755 | 6.777580 | ACATTTGTTCAGTACCAATCCTCTTT | 59.222 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
711 | 756 | 6.877611 | TTTGTTCAGTACCAATCCTCTTTC | 57.122 | 37.500 | 0.00 | 0.00 | 0.00 | 2.62 |
712 | 757 | 5.560722 | TGTTCAGTACCAATCCTCTTTCA | 57.439 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
713 | 758 | 6.126863 | TGTTCAGTACCAATCCTCTTTCAT | 57.873 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
714 | 759 | 6.542821 | TGTTCAGTACCAATCCTCTTTCATT | 58.457 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
715 | 760 | 7.685481 | TGTTCAGTACCAATCCTCTTTCATTA | 58.315 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
716 | 761 | 8.160765 | TGTTCAGTACCAATCCTCTTTCATTAA | 58.839 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
717 | 762 | 9.178758 | GTTCAGTACCAATCCTCTTTCATTAAT | 57.821 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
718 | 763 | 8.964476 | TCAGTACCAATCCTCTTTCATTAATC | 57.036 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
719 | 764 | 8.548025 | TCAGTACCAATCCTCTTTCATTAATCA | 58.452 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
720 | 765 | 9.177608 | CAGTACCAATCCTCTTTCATTAATCAA | 57.822 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
721 | 766 | 9.927081 | AGTACCAATCCTCTTTCATTAATCAAT | 57.073 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
724 | 769 | 9.039165 | ACCAATCCTCTTTCATTAATCAATTGT | 57.961 | 29.630 | 5.13 | 0.00 | 0.00 | 2.71 |
725 | 770 | 9.309516 | CCAATCCTCTTTCATTAATCAATTGTG | 57.690 | 33.333 | 5.13 | 0.00 | 0.00 | 3.33 |
726 | 771 | 9.865321 | CAATCCTCTTTCATTAATCAATTGTGT | 57.135 | 29.630 | 5.13 | 0.00 | 0.00 | 3.72 |
728 | 773 | 9.865321 | ATCCTCTTTCATTAATCAATTGTGTTG | 57.135 | 29.630 | 5.13 | 0.00 | 0.00 | 3.33 |
729 | 774 | 8.859090 | TCCTCTTTCATTAATCAATTGTGTTGT | 58.141 | 29.630 | 5.13 | 0.00 | 0.00 | 3.32 |
730 | 775 | 8.918658 | CCTCTTTCATTAATCAATTGTGTTGTG | 58.081 | 33.333 | 5.13 | 6.35 | 0.00 | 3.33 |
731 | 776 | 9.467258 | CTCTTTCATTAATCAATTGTGTTGTGT | 57.533 | 29.630 | 5.13 | 0.00 | 0.00 | 3.72 |
732 | 777 | 9.462174 | TCTTTCATTAATCAATTGTGTTGTGTC | 57.538 | 29.630 | 5.13 | 0.00 | 0.00 | 3.67 |
733 | 778 | 7.850268 | TTCATTAATCAATTGTGTTGTGTCG | 57.150 | 32.000 | 5.13 | 0.00 | 0.00 | 4.35 |
734 | 779 | 6.377780 | TCATTAATCAATTGTGTTGTGTCGG | 58.622 | 36.000 | 5.13 | 0.00 | 0.00 | 4.79 |
735 | 780 | 5.759506 | TTAATCAATTGTGTTGTGTCGGT | 57.240 | 34.783 | 5.13 | 0.00 | 0.00 | 4.69 |
736 | 781 | 4.647424 | AATCAATTGTGTTGTGTCGGTT | 57.353 | 36.364 | 5.13 | 0.00 | 0.00 | 4.44 |
737 | 782 | 5.759506 | AATCAATTGTGTTGTGTCGGTTA | 57.240 | 34.783 | 5.13 | 0.00 | 0.00 | 2.85 |
738 | 783 | 5.957842 | ATCAATTGTGTTGTGTCGGTTAT | 57.042 | 34.783 | 5.13 | 0.00 | 0.00 | 1.89 |
739 | 784 | 7.441890 | AATCAATTGTGTTGTGTCGGTTATA | 57.558 | 32.000 | 5.13 | 0.00 | 0.00 | 0.98 |
740 | 785 | 6.230849 | TCAATTGTGTTGTGTCGGTTATAC | 57.769 | 37.500 | 5.13 | 0.00 | 0.00 | 1.47 |
741 | 786 | 5.992829 | TCAATTGTGTTGTGTCGGTTATACT | 59.007 | 36.000 | 5.13 | 0.00 | 0.00 | 2.12 |
742 | 787 | 6.146510 | TCAATTGTGTTGTGTCGGTTATACTC | 59.853 | 38.462 | 5.13 | 0.00 | 0.00 | 2.59 |
743 | 788 | 3.916761 | TGTGTTGTGTCGGTTATACTCC | 58.083 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
744 | 789 | 3.321396 | TGTGTTGTGTCGGTTATACTCCA | 59.679 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
745 | 790 | 4.020928 | TGTGTTGTGTCGGTTATACTCCAT | 60.021 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
746 | 791 | 4.565564 | GTGTTGTGTCGGTTATACTCCATC | 59.434 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
747 | 792 | 4.117685 | GTTGTGTCGGTTATACTCCATCC | 58.882 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
748 | 793 | 2.359848 | TGTGTCGGTTATACTCCATCCG | 59.640 | 50.000 | 0.00 | 0.00 | 42.12 | 4.18 |
749 | 794 | 2.360165 | GTGTCGGTTATACTCCATCCGT | 59.640 | 50.000 | 0.00 | 0.00 | 41.58 | 4.69 |
750 | 795 | 3.025978 | TGTCGGTTATACTCCATCCGTT | 58.974 | 45.455 | 0.00 | 0.00 | 41.58 | 4.44 |
751 | 796 | 3.448301 | TGTCGGTTATACTCCATCCGTTT | 59.552 | 43.478 | 0.00 | 0.00 | 41.58 | 3.60 |
752 | 797 | 4.047142 | GTCGGTTATACTCCATCCGTTTC | 58.953 | 47.826 | 0.00 | 0.00 | 41.58 | 2.78 |
753 | 798 | 3.700539 | TCGGTTATACTCCATCCGTTTCA | 59.299 | 43.478 | 0.00 | 0.00 | 41.58 | 2.69 |
754 | 799 | 4.342951 | TCGGTTATACTCCATCCGTTTCAT | 59.657 | 41.667 | 0.00 | 0.00 | 41.58 | 2.57 |
755 | 800 | 5.535783 | TCGGTTATACTCCATCCGTTTCATA | 59.464 | 40.000 | 0.00 | 0.00 | 41.58 | 2.15 |
756 | 801 | 6.040729 | TCGGTTATACTCCATCCGTTTCATAA | 59.959 | 38.462 | 0.00 | 0.00 | 41.58 | 1.90 |
757 | 802 | 6.872020 | CGGTTATACTCCATCCGTTTCATAAT | 59.128 | 38.462 | 0.00 | 0.00 | 36.99 | 1.28 |
758 | 803 | 8.030692 | CGGTTATACTCCATCCGTTTCATAATA | 58.969 | 37.037 | 0.00 | 0.00 | 36.99 | 0.98 |
759 | 804 | 9.886132 | GGTTATACTCCATCCGTTTCATAATAT | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
765 | 810 | 7.819900 | ACTCCATCCGTTTCATAATATAAGAGC | 59.180 | 37.037 | 0.00 | 0.00 | 0.00 | 4.09 |
766 | 811 | 6.811665 | TCCATCCGTTTCATAATATAAGAGCG | 59.188 | 38.462 | 0.00 | 0.00 | 0.00 | 5.03 |
767 | 812 | 6.036083 | CCATCCGTTTCATAATATAAGAGCGG | 59.964 | 42.308 | 0.00 | 0.00 | 34.92 | 5.52 |
768 | 813 | 6.092955 | TCCGTTTCATAATATAAGAGCGGT | 57.907 | 37.500 | 0.00 | 0.00 | 35.06 | 5.68 |
769 | 814 | 6.518493 | TCCGTTTCATAATATAAGAGCGGTT | 58.482 | 36.000 | 0.00 | 0.00 | 35.06 | 4.44 |
770 | 815 | 6.987992 | TCCGTTTCATAATATAAGAGCGGTTT | 59.012 | 34.615 | 0.00 | 0.00 | 35.06 | 3.27 |
771 | 816 | 7.496591 | TCCGTTTCATAATATAAGAGCGGTTTT | 59.503 | 33.333 | 0.00 | 0.00 | 35.06 | 2.43 |
772 | 817 | 7.586300 | CCGTTTCATAATATAAGAGCGGTTTTG | 59.414 | 37.037 | 0.00 | 0.00 | 31.62 | 2.44 |
773 | 818 | 8.332464 | CGTTTCATAATATAAGAGCGGTTTTGA | 58.668 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
774 | 819 | 9.434559 | GTTTCATAATATAAGAGCGGTTTTGAC | 57.565 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
775 | 820 | 8.725405 | TTCATAATATAAGAGCGGTTTTGACA | 57.275 | 30.769 | 0.00 | 0.00 | 0.00 | 3.58 |
776 | 821 | 8.138365 | TCATAATATAAGAGCGGTTTTGACAC | 57.862 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
777 | 822 | 5.464965 | AATATAAGAGCGGTTTTGACACG | 57.535 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
778 | 823 | 2.512485 | TAAGAGCGGTTTTGACACGA | 57.488 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
779 | 824 | 1.217882 | AAGAGCGGTTTTGACACGAG | 58.782 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
780 | 825 | 0.600255 | AGAGCGGTTTTGACACGAGG | 60.600 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
781 | 826 | 1.566018 | GAGCGGTTTTGACACGAGGG | 61.566 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
782 | 827 | 1.595929 | GCGGTTTTGACACGAGGGA | 60.596 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
783 | 828 | 1.566018 | GCGGTTTTGACACGAGGGAG | 61.566 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
784 | 829 | 0.249741 | CGGTTTTGACACGAGGGAGT | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
785 | 830 | 1.000060 | CGGTTTTGACACGAGGGAGTA | 60.000 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
786 | 831 | 2.546373 | CGGTTTTGACACGAGGGAGTAA | 60.546 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
787 | 832 | 3.671716 | GGTTTTGACACGAGGGAGTAAT | 58.328 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
788 | 833 | 4.070009 | GGTTTTGACACGAGGGAGTAATT | 58.930 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
789 | 834 | 4.083484 | GGTTTTGACACGAGGGAGTAATTG | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 2.32 |
790 | 835 | 4.345859 | TTTGACACGAGGGAGTAATTGT | 57.654 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
791 | 836 | 4.345859 | TTGACACGAGGGAGTAATTGTT | 57.654 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
792 | 837 | 4.345859 | TGACACGAGGGAGTAATTGTTT | 57.654 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
795 | 840 | 5.237779 | TGACACGAGGGAGTAATTGTTTTTC | 59.762 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
799 | 844 | 7.172703 | ACACGAGGGAGTAATTGTTTTTCTTAG | 59.827 | 37.037 | 0.00 | 0.00 | 0.00 | 2.18 |
963 | 1008 | 5.061721 | AGGAAGTTTTCACCACTACCAAT | 57.938 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
964 | 1009 | 5.070685 | AGGAAGTTTTCACCACTACCAATC | 58.929 | 41.667 | 0.00 | 0.00 | 0.00 | 2.67 |
965 | 1010 | 4.083484 | GGAAGTTTTCACCACTACCAATCG | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 3.34 |
966 | 1011 | 4.081322 | AGTTTTCACCACTACCAATCGT | 57.919 | 40.909 | 0.00 | 0.00 | 0.00 | 3.73 |
967 | 1012 | 4.062991 | AGTTTTCACCACTACCAATCGTC | 58.937 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
970 | 1015 | 1.822990 | TCACCACTACCAATCGTCTCC | 59.177 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
971 | 1016 | 1.134788 | CACCACTACCAATCGTCTCCC | 60.135 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
972 | 1017 | 1.191535 | CCACTACCAATCGTCTCCCA | 58.808 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
973 | 1018 | 1.137086 | CCACTACCAATCGTCTCCCAG | 59.863 | 57.143 | 0.00 | 0.00 | 0.00 | 4.45 |
1348 | 1399 | 3.822192 | CCGACATCCGCCTCGACA | 61.822 | 66.667 | 0.00 | 0.00 | 36.84 | 4.35 |
1446 | 1497 | 1.068943 | TCCTCCTCCCTCTCCGCTAT | 61.069 | 60.000 | 0.00 | 0.00 | 0.00 | 2.97 |
1527 | 1578 | 4.632458 | GGATCCGGCGAGCTCGAC | 62.632 | 72.222 | 38.74 | 35.62 | 45.58 | 4.20 |
1692 | 1743 | 2.560981 | GTTCCATTTCAACATCCCCGTT | 59.439 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
1767 | 1818 | 9.739276 | TGTCTTTGATTGATTGTTAGGAACTAT | 57.261 | 29.630 | 0.00 | 0.00 | 42.38 | 2.12 |
1786 | 1932 | 3.698029 | ATTCTATGATGTTGGTTGCGC | 57.302 | 42.857 | 0.00 | 0.00 | 0.00 | 6.09 |
1801 | 1948 | 2.742053 | GTTGCGCGGATTGGATATGTAT | 59.258 | 45.455 | 8.83 | 0.00 | 0.00 | 2.29 |
1842 | 1992 | 6.785963 | AGGTTATAATGGGCTAGCTTACACTA | 59.214 | 38.462 | 15.72 | 6.47 | 0.00 | 2.74 |
1848 | 1998 | 3.134458 | GGGCTAGCTTACACTATTGCTG | 58.866 | 50.000 | 15.72 | 0.00 | 37.02 | 4.41 |
1858 | 2008 | 6.590292 | GCTTACACTATTGCTGTTCTACTGAA | 59.410 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
1907 | 2057 | 4.520111 | TGAGATTGCCGAATTATTGGATGG | 59.480 | 41.667 | 0.00 | 0.00 | 30.72 | 3.51 |
1965 | 2123 | 5.730550 | AGTATTCGTTCTGGCTAAATGTCA | 58.269 | 37.500 | 0.00 | 0.00 | 0.00 | 3.58 |
2043 | 2201 | 7.389607 | GCAAGGTCAAGAACTAATTTGGTACTA | 59.610 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
2044 | 2202 | 8.936864 | CAAGGTCAAGAACTAATTTGGTACTAG | 58.063 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
2045 | 2203 | 8.203681 | AGGTCAAGAACTAATTTGGTACTAGT | 57.796 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2046 | 2204 | 8.657712 | AGGTCAAGAACTAATTTGGTACTAGTT | 58.342 | 33.333 | 0.00 | 4.61 | 38.32 | 2.24 |
2047 | 2205 | 9.281371 | GGTCAAGAACTAATTTGGTACTAGTTT | 57.719 | 33.333 | 0.00 | 0.00 | 36.30 | 2.66 |
2157 | 2409 | 0.886563 | GGTTTGCAGCTGCTGATCTT | 59.113 | 50.000 | 36.61 | 0.00 | 42.66 | 2.40 |
2159 | 2411 | 1.135460 | GTTTGCAGCTGCTGATCTTCC | 60.135 | 52.381 | 36.61 | 14.10 | 42.66 | 3.46 |
2162 | 2414 | 1.340697 | TGCAGCTGCTGATCTTCCATT | 60.341 | 47.619 | 36.61 | 0.00 | 42.66 | 3.16 |
2167 | 2419 | 2.358267 | GCTGCTGATCTTCCATTTCCAG | 59.642 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2169 | 2421 | 3.878103 | CTGCTGATCTTCCATTTCCAGAG | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
2170 | 2422 | 3.212685 | GCTGATCTTCCATTTCCAGAGG | 58.787 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2171 | 2423 | 3.818180 | CTGATCTTCCATTTCCAGAGGG | 58.182 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2172 | 2424 | 3.457380 | CTGATCTTCCATTTCCAGAGGGA | 59.543 | 47.826 | 0.00 | 0.00 | 43.03 | 4.20 |
2173 | 2425 | 3.200825 | TGATCTTCCATTTCCAGAGGGAC | 59.799 | 47.826 | 0.00 | 0.00 | 44.89 | 4.46 |
2177 | 2487 | 1.815421 | CATTTCCAGAGGGACCGCG | 60.815 | 63.158 | 0.00 | 0.00 | 44.89 | 6.46 |
2203 | 2725 | 1.130678 | GGGAGGGGATCAGGCCTAAG | 61.131 | 65.000 | 3.98 | 0.00 | 0.00 | 2.18 |
2204 | 2726 | 0.104934 | GGAGGGGATCAGGCCTAAGA | 60.105 | 60.000 | 3.98 | 0.00 | 0.00 | 2.10 |
2212 | 2752 | 0.687757 | TCAGGCCTAAGATGCGGACT | 60.688 | 55.000 | 3.98 | 0.00 | 39.98 | 3.85 |
2354 | 2894 | 5.055144 | CACTGATCAGTTATCTCACCATGG | 58.945 | 45.833 | 25.84 | 11.19 | 40.20 | 3.66 |
2390 | 2930 | 8.238631 | GGTCTGAAAGTGTAGAGTTAGACTTAG | 58.761 | 40.741 | 9.18 | 0.00 | 41.14 | 2.18 |
2451 | 2991 | 8.081633 | CCTACATGAATGCAACTTTGAACTAAA | 58.918 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
2477 | 3017 | 5.465390 | GGTTCCAAACTGGCTTATTCAAAAC | 59.535 | 40.000 | 0.00 | 0.00 | 37.47 | 2.43 |
2508 | 3049 | 9.851686 | AACATCCATTACTTATAATCAGCAGAA | 57.148 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
2639 | 3180 | 5.753921 | GTCATGAAATTAACTACTCCCTCCG | 59.246 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2667 | 3208 | 6.866248 | CCAAATTAATTGTCGCACCTTTAGTT | 59.134 | 34.615 | 0.39 | 0.00 | 37.32 | 2.24 |
2706 | 3464 | 4.245660 | CTGCGACATTAATATGGATCGGT | 58.754 | 43.478 | 0.00 | 0.00 | 36.01 | 4.69 |
2726 | 3484 | 7.008021 | TCGGTGGGAGTATAAAAAGTTAGTT | 57.992 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2818 | 4385 | 6.882656 | AGTGCATGAGTGATAGTACTTTCAT | 58.117 | 36.000 | 17.43 | 9.17 | 0.00 | 2.57 |
2944 | 4513 | 1.418637 | TGGAGGTTTAACAAGCCGAGT | 59.581 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
2966 | 4535 | 4.918201 | GCCCTCCGCCCAATCTCG | 62.918 | 72.222 | 0.00 | 0.00 | 0.00 | 4.04 |
3087 | 4657 | 1.134128 | TGTGAGCATGACCACACAGTT | 60.134 | 47.619 | 14.15 | 0.00 | 38.26 | 3.16 |
3122 | 4692 | 8.344098 | CGAATTTAGTGGTTTTGGTTGTAGTTA | 58.656 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3136 | 4706 | 7.323420 | TGGTTGTAGTTAAGACTCTGATCATG | 58.677 | 38.462 | 0.00 | 0.00 | 37.33 | 3.07 |
3254 | 4824 | 0.445436 | CAAGTAGCAAAGCCAGCTCG | 59.555 | 55.000 | 0.00 | 0.00 | 42.32 | 5.03 |
3354 | 4924 | 1.980784 | ATGCTAGAGGGCCTGCTGTG | 61.981 | 60.000 | 12.95 | 7.06 | 0.00 | 3.66 |
3370 | 4940 | 7.260603 | GCCTGCTGTGTTTATTTATTCAATCT | 58.739 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
3416 | 4988 | 5.901413 | ATGGATTAGAGAAGCAGGAATGA | 57.099 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
3435 | 5007 | 2.087646 | GAGAACCTGAACATTGGAGCC | 58.912 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
3450 | 5022 | 3.253955 | GCCGTATTATGGCGCCAG | 58.746 | 61.111 | 35.36 | 19.96 | 40.96 | 4.85 |
3497 | 5069 | 9.701355 | CGGGAACATTTTATTATTTTCAAATGC | 57.299 | 29.630 | 3.88 | 0.00 | 39.32 | 3.56 |
3516 | 5088 | 5.603170 | ATGCACATATTTTTCCCTGGAAG | 57.397 | 39.130 | 0.00 | 0.00 | 35.38 | 3.46 |
3614 | 5186 | 8.839343 | TGTATTTGTGATATGTTTGCATCCTAG | 58.161 | 33.333 | 0.00 | 0.00 | 36.58 | 3.02 |
3695 | 5269 | 5.748152 | CGGATCAGCTTTTTGACAAAGAAAA | 59.252 | 36.000 | 0.10 | 0.00 | 0.00 | 2.29 |
3722 | 5296 | 6.771188 | AATCTGTGAAACTCTAACAACTCG | 57.229 | 37.500 | 0.00 | 0.00 | 38.04 | 4.18 |
3723 | 5297 | 4.049186 | TCTGTGAAACTCTAACAACTCGC | 58.951 | 43.478 | 0.00 | 0.00 | 38.04 | 5.03 |
3835 | 5442 | 2.164219 | CTGGCTCTGTTGTTGTTGTTGT | 59.836 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
3836 | 5443 | 2.560542 | TGGCTCTGTTGTTGTTGTTGTT | 59.439 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
3837 | 5444 | 2.923020 | GGCTCTGTTGTTGTTGTTGTTG | 59.077 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
3848 | 5455 | 0.527385 | TTGTTGTTGAGCTTTGGCGC | 60.527 | 50.000 | 0.00 | 0.00 | 44.37 | 6.53 |
3866 | 5473 | 2.735663 | GCGCTCTTGATGGAGTATGATG | 59.264 | 50.000 | 0.00 | 0.00 | 35.89 | 3.07 |
3920 | 5527 | 3.041211 | TGCAGAGCTGGGTCTGTATAAT | 58.959 | 45.455 | 24.34 | 0.00 | 45.07 | 1.28 |
4184 | 5791 | 5.123820 | TGGCCTTCGAATTTCTGAATAACAG | 59.876 | 40.000 | 3.32 | 0.00 | 46.97 | 3.16 |
4196 | 5803 | 4.948004 | TCTGAATAACAGTCGGCTTAGAGA | 59.052 | 41.667 | 0.00 | 0.00 | 45.86 | 3.10 |
4201 | 5808 | 4.373348 | AACAGTCGGCTTAGAGATGTAC | 57.627 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
4202 | 5809 | 3.622630 | ACAGTCGGCTTAGAGATGTACT | 58.377 | 45.455 | 0.00 | 0.00 | 0.00 | 2.73 |
4203 | 5810 | 3.628487 | ACAGTCGGCTTAGAGATGTACTC | 59.372 | 47.826 | 0.00 | 0.00 | 45.22 | 2.59 |
4218 | 5826 | 2.500098 | TGTACTCATAGGGTGCAACTCC | 59.500 | 50.000 | 0.00 | 0.00 | 39.04 | 3.85 |
4219 | 5827 | 1.958288 | ACTCATAGGGTGCAACTCCT | 58.042 | 50.000 | 0.00 | 5.70 | 39.04 | 3.69 |
4220 | 5828 | 1.834263 | ACTCATAGGGTGCAACTCCTC | 59.166 | 52.381 | 0.00 | 0.00 | 39.04 | 3.71 |
4267 | 5875 | 3.124636 | GCACGTGGGTAAAGTCAGTTATG | 59.875 | 47.826 | 18.88 | 0.00 | 0.00 | 1.90 |
4301 | 5909 | 1.064017 | TCCACCACCTCACTTTGCTTT | 60.064 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
4351 | 6018 | 8.348507 | CAAATGTAAGATAAGATGGGAGAAAGC | 58.651 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
4388 | 6055 | 2.761465 | GGGCAGCCTAGGCATCCTT | 61.761 | 63.158 | 34.70 | 11.89 | 44.88 | 3.36 |
4397 | 6064 | 2.374504 | CCTAGGCATCCTTGACATGGAT | 59.625 | 50.000 | 15.45 | 15.45 | 44.44 | 3.41 |
4448 | 6115 | 2.608623 | CCTTGGTTGGTTTGGAAGGAT | 58.391 | 47.619 | 0.00 | 0.00 | 36.09 | 3.24 |
4451 | 6118 | 1.337118 | GGTTGGTTTGGAAGGATGCA | 58.663 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
4452 | 6119 | 1.691434 | GGTTGGTTTGGAAGGATGCAA | 59.309 | 47.619 | 0.00 | 0.00 | 34.82 | 4.08 |
4501 | 6168 | 3.882444 | CATGTGATGAAGAGGACATGGT | 58.118 | 45.455 | 0.00 | 0.00 | 41.25 | 3.55 |
4503 | 6170 | 2.905736 | TGTGATGAAGAGGACATGGTGA | 59.094 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
4505 | 6172 | 4.716287 | TGTGATGAAGAGGACATGGTGATA | 59.284 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
4529 | 6196 | 2.119801 | ATGAGTGCACTTCCATCACC | 57.880 | 50.000 | 22.65 | 5.86 | 0.00 | 4.02 |
4539 | 6206 | 1.175983 | TTCCATCACCGTTGGCAACC | 61.176 | 55.000 | 23.68 | 7.21 | 34.06 | 3.77 |
4541 | 6208 | 1.963855 | CATCACCGTTGGCAACCGA | 60.964 | 57.895 | 23.68 | 17.46 | 0.00 | 4.69 |
4576 | 6243 | 2.116125 | GCACTCCCCTTGGCTTGT | 59.884 | 61.111 | 0.00 | 0.00 | 0.00 | 3.16 |
4586 | 6253 | 1.733402 | CTTGGCTTGTGGGTCGCAAA | 61.733 | 55.000 | 0.00 | 0.00 | 33.37 | 3.68 |
4625 | 6292 | 4.216042 | CCCTCCATTTTTGCAATTTCCAAC | 59.784 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
4707 | 6374 | 4.261578 | ACAAATTCTGGGCTCACAATTG | 57.738 | 40.909 | 3.24 | 3.24 | 0.00 | 2.32 |
4728 | 6395 | 7.976135 | ATTGAGCACATCCTTGAATACTATC | 57.024 | 36.000 | 0.00 | 0.00 | 0.00 | 2.08 |
4731 | 6398 | 5.862845 | AGCACATCCTTGAATACTATCAGG | 58.137 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
4734 | 6401 | 6.017605 | GCACATCCTTGAATACTATCAGGTTG | 60.018 | 42.308 | 0.00 | 0.00 | 0.00 | 3.77 |
4784 | 6451 | 1.627834 | GAGGGGGTGGATGATGAGATC | 59.372 | 57.143 | 0.00 | 0.00 | 0.00 | 2.75 |
4790 | 6457 | 3.432186 | GGGTGGATGATGAGATCGTTTGA | 60.432 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
34 | 35 | 2.735772 | CCGCACCCTCTGGTATGCT | 61.736 | 63.158 | 7.98 | 0.00 | 45.57 | 3.79 |
67 | 68 | 0.037447 | AGGAGGGCAAAGAAGAGCAC | 59.963 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
121 | 122 | 2.436646 | CACCACCTCGATGCCACC | 60.437 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
350 | 357 | 0.523966 | AGATCGCATCTAGCTACCGC | 59.476 | 55.000 | 0.00 | 0.00 | 42.61 | 5.68 |
422 | 430 | 1.067776 | CGAGACAAAGGGTTCTACGCT | 60.068 | 52.381 | 0.00 | 0.00 | 43.70 | 5.07 |
443 | 451 | 1.556564 | CCTCAATATATACCGCGGCG | 58.443 | 55.000 | 28.58 | 16.78 | 0.00 | 6.46 |
521 | 554 | 2.763448 | CCCTCTCTGGTCGATCTTTCTT | 59.237 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
540 | 574 | 3.294214 | TCTCTATCCCTTGTAACGACCC | 58.706 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
614 | 659 | 5.652994 | AAACAAGGTGCTTGAGTTGTTAA | 57.347 | 34.783 | 0.00 | 0.00 | 43.42 | 2.01 |
623 | 668 | 3.798337 | GTGATCACAAAACAAGGTGCTTG | 59.202 | 43.478 | 21.07 | 0.00 | 45.85 | 4.01 |
624 | 669 | 3.446873 | TGTGATCACAAAACAAGGTGCTT | 59.553 | 39.130 | 26.02 | 0.00 | 38.56 | 3.91 |
625 | 670 | 3.023119 | TGTGATCACAAAACAAGGTGCT | 58.977 | 40.909 | 26.02 | 0.00 | 38.56 | 4.40 |
626 | 671 | 3.435105 | TGTGATCACAAAACAAGGTGC | 57.565 | 42.857 | 26.02 | 0.00 | 38.56 | 5.01 |
637 | 682 | 6.998074 | AGTACCTTCTCATTTTTGTGATCACA | 59.002 | 34.615 | 24.56 | 24.56 | 39.98 | 3.58 |
638 | 683 | 7.440523 | AGTACCTTCTCATTTTTGTGATCAC | 57.559 | 36.000 | 19.27 | 19.27 | 0.00 | 3.06 |
639 | 684 | 7.040478 | CCAAGTACCTTCTCATTTTTGTGATCA | 60.040 | 37.037 | 0.00 | 0.00 | 0.00 | 2.92 |
640 | 685 | 7.040409 | ACCAAGTACCTTCTCATTTTTGTGATC | 60.040 | 37.037 | 0.00 | 0.00 | 0.00 | 2.92 |
641 | 686 | 6.777580 | ACCAAGTACCTTCTCATTTTTGTGAT | 59.222 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
642 | 687 | 6.126409 | ACCAAGTACCTTCTCATTTTTGTGA | 58.874 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
643 | 688 | 6.391227 | ACCAAGTACCTTCTCATTTTTGTG | 57.609 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
644 | 689 | 7.123547 | TGAAACCAAGTACCTTCTCATTTTTGT | 59.876 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
645 | 690 | 7.488322 | TGAAACCAAGTACCTTCTCATTTTTG | 58.512 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
646 | 691 | 7.654022 | TGAAACCAAGTACCTTCTCATTTTT | 57.346 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
647 | 692 | 6.239036 | GCTGAAACCAAGTACCTTCTCATTTT | 60.239 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
648 | 693 | 5.241728 | GCTGAAACCAAGTACCTTCTCATTT | 59.758 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
649 | 694 | 4.762251 | GCTGAAACCAAGTACCTTCTCATT | 59.238 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
650 | 695 | 4.202461 | TGCTGAAACCAAGTACCTTCTCAT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
651 | 696 | 3.135712 | TGCTGAAACCAAGTACCTTCTCA | 59.864 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
652 | 697 | 3.740115 | TGCTGAAACCAAGTACCTTCTC | 58.260 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
653 | 698 | 3.857157 | TGCTGAAACCAAGTACCTTCT | 57.143 | 42.857 | 0.00 | 0.00 | 0.00 | 2.85 |
654 | 699 | 6.759497 | ATATTGCTGAAACCAAGTACCTTC | 57.241 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
655 | 700 | 7.630082 | TCTATATTGCTGAAACCAAGTACCTT | 58.370 | 34.615 | 0.00 | 0.00 | 0.00 | 3.50 |
656 | 701 | 7.195374 | TCTATATTGCTGAAACCAAGTACCT | 57.805 | 36.000 | 0.00 | 0.00 | 0.00 | 3.08 |
657 | 702 | 7.499232 | ACATCTATATTGCTGAAACCAAGTACC | 59.501 | 37.037 | 0.00 | 0.00 | 0.00 | 3.34 |
658 | 703 | 8.438676 | ACATCTATATTGCTGAAACCAAGTAC | 57.561 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
659 | 704 | 8.264347 | TGACATCTATATTGCTGAAACCAAGTA | 58.736 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
660 | 705 | 7.066284 | GTGACATCTATATTGCTGAAACCAAGT | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
661 | 706 | 7.066163 | TGTGACATCTATATTGCTGAAACCAAG | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 3.61 |
662 | 707 | 6.883756 | TGTGACATCTATATTGCTGAAACCAA | 59.116 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
663 | 708 | 6.413892 | TGTGACATCTATATTGCTGAAACCA | 58.586 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
664 | 709 | 6.925610 | TGTGACATCTATATTGCTGAAACC | 57.074 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
665 | 710 | 9.229784 | CAAATGTGACATCTATATTGCTGAAAC | 57.770 | 33.333 | 0.00 | 0.00 | 0.00 | 2.78 |
666 | 711 | 8.959548 | ACAAATGTGACATCTATATTGCTGAAA | 58.040 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
667 | 712 | 8.510243 | ACAAATGTGACATCTATATTGCTGAA | 57.490 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
668 | 713 | 8.510243 | AACAAATGTGACATCTATATTGCTGA | 57.490 | 30.769 | 0.00 | 0.00 | 0.00 | 4.26 |
669 | 714 | 8.400186 | TGAACAAATGTGACATCTATATTGCTG | 58.600 | 33.333 | 0.00 | 0.00 | 0.00 | 4.41 |
670 | 715 | 8.510243 | TGAACAAATGTGACATCTATATTGCT | 57.490 | 30.769 | 0.00 | 0.00 | 0.00 | 3.91 |
671 | 716 | 8.400947 | ACTGAACAAATGTGACATCTATATTGC | 58.599 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
674 | 719 | 9.547753 | GGTACTGAACAAATGTGACATCTATAT | 57.452 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
675 | 720 | 8.536175 | TGGTACTGAACAAATGTGACATCTATA | 58.464 | 33.333 | 0.00 | 0.00 | 0.00 | 1.31 |
676 | 721 | 7.394016 | TGGTACTGAACAAATGTGACATCTAT | 58.606 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
677 | 722 | 6.764379 | TGGTACTGAACAAATGTGACATCTA | 58.236 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
678 | 723 | 5.620206 | TGGTACTGAACAAATGTGACATCT | 58.380 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
679 | 724 | 5.940192 | TGGTACTGAACAAATGTGACATC | 57.060 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
680 | 725 | 6.071952 | GGATTGGTACTGAACAAATGTGACAT | 60.072 | 38.462 | 0.00 | 0.00 | 31.42 | 3.06 |
681 | 726 | 5.240623 | GGATTGGTACTGAACAAATGTGACA | 59.759 | 40.000 | 0.00 | 0.00 | 31.42 | 3.58 |
682 | 727 | 5.473504 | AGGATTGGTACTGAACAAATGTGAC | 59.526 | 40.000 | 0.00 | 0.00 | 31.42 | 3.67 |
683 | 728 | 5.630121 | AGGATTGGTACTGAACAAATGTGA | 58.370 | 37.500 | 0.00 | 0.00 | 31.42 | 3.58 |
684 | 729 | 5.707298 | AGAGGATTGGTACTGAACAAATGTG | 59.293 | 40.000 | 0.00 | 0.00 | 31.42 | 3.21 |
685 | 730 | 5.880901 | AGAGGATTGGTACTGAACAAATGT | 58.119 | 37.500 | 0.00 | 0.00 | 31.42 | 2.71 |
686 | 731 | 6.824305 | AAGAGGATTGGTACTGAACAAATG | 57.176 | 37.500 | 0.00 | 0.00 | 31.42 | 2.32 |
687 | 732 | 7.004086 | TGAAAGAGGATTGGTACTGAACAAAT | 58.996 | 34.615 | 0.00 | 0.00 | 34.18 | 2.32 |
688 | 733 | 6.361433 | TGAAAGAGGATTGGTACTGAACAAA | 58.639 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
689 | 734 | 5.935945 | TGAAAGAGGATTGGTACTGAACAA | 58.064 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
690 | 735 | 5.560722 | TGAAAGAGGATTGGTACTGAACA | 57.439 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
691 | 736 | 8.561738 | TTAATGAAAGAGGATTGGTACTGAAC | 57.438 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
692 | 737 | 9.396022 | GATTAATGAAAGAGGATTGGTACTGAA | 57.604 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
693 | 738 | 8.548025 | TGATTAATGAAAGAGGATTGGTACTGA | 58.452 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
694 | 739 | 8.737168 | TGATTAATGAAAGAGGATTGGTACTG | 57.263 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
695 | 740 | 9.927081 | ATTGATTAATGAAAGAGGATTGGTACT | 57.073 | 29.630 | 0.00 | 0.00 | 0.00 | 2.73 |
698 | 743 | 9.039165 | ACAATTGATTAATGAAAGAGGATTGGT | 57.961 | 29.630 | 13.59 | 0.00 | 0.00 | 3.67 |
699 | 744 | 9.309516 | CACAATTGATTAATGAAAGAGGATTGG | 57.690 | 33.333 | 13.59 | 0.00 | 0.00 | 3.16 |
700 | 745 | 9.865321 | ACACAATTGATTAATGAAAGAGGATTG | 57.135 | 29.630 | 13.59 | 0.00 | 0.00 | 2.67 |
702 | 747 | 9.865321 | CAACACAATTGATTAATGAAAGAGGAT | 57.135 | 29.630 | 13.59 | 0.00 | 0.00 | 3.24 |
703 | 748 | 8.859090 | ACAACACAATTGATTAATGAAAGAGGA | 58.141 | 29.630 | 13.59 | 0.00 | 0.00 | 3.71 |
704 | 749 | 8.918658 | CACAACACAATTGATTAATGAAAGAGG | 58.081 | 33.333 | 13.59 | 0.00 | 0.00 | 3.69 |
705 | 750 | 9.467258 | ACACAACACAATTGATTAATGAAAGAG | 57.533 | 29.630 | 13.59 | 0.00 | 0.00 | 2.85 |
706 | 751 | 9.462174 | GACACAACACAATTGATTAATGAAAGA | 57.538 | 29.630 | 13.59 | 0.00 | 0.00 | 2.52 |
707 | 752 | 8.419435 | CGACACAACACAATTGATTAATGAAAG | 58.581 | 33.333 | 13.59 | 0.00 | 0.00 | 2.62 |
708 | 753 | 7.380870 | CCGACACAACACAATTGATTAATGAAA | 59.619 | 33.333 | 13.59 | 0.00 | 0.00 | 2.69 |
709 | 754 | 6.860539 | CCGACACAACACAATTGATTAATGAA | 59.139 | 34.615 | 13.59 | 0.00 | 0.00 | 2.57 |
710 | 755 | 6.016693 | ACCGACACAACACAATTGATTAATGA | 60.017 | 34.615 | 13.59 | 0.00 | 0.00 | 2.57 |
711 | 756 | 6.148948 | ACCGACACAACACAATTGATTAATG | 58.851 | 36.000 | 13.59 | 9.89 | 0.00 | 1.90 |
712 | 757 | 6.325919 | ACCGACACAACACAATTGATTAAT | 57.674 | 33.333 | 13.59 | 0.00 | 0.00 | 1.40 |
713 | 758 | 5.759506 | ACCGACACAACACAATTGATTAA | 57.240 | 34.783 | 13.59 | 0.00 | 0.00 | 1.40 |
714 | 759 | 5.759506 | AACCGACACAACACAATTGATTA | 57.240 | 34.783 | 13.59 | 0.00 | 0.00 | 1.75 |
715 | 760 | 4.647424 | AACCGACACAACACAATTGATT | 57.353 | 36.364 | 13.59 | 3.09 | 0.00 | 2.57 |
716 | 761 | 5.957842 | ATAACCGACACAACACAATTGAT | 57.042 | 34.783 | 13.59 | 0.00 | 0.00 | 2.57 |
717 | 762 | 5.992829 | AGTATAACCGACACAACACAATTGA | 59.007 | 36.000 | 13.59 | 0.00 | 0.00 | 2.57 |
718 | 763 | 6.236017 | AGTATAACCGACACAACACAATTG | 57.764 | 37.500 | 3.24 | 3.24 | 0.00 | 2.32 |
719 | 764 | 5.410439 | GGAGTATAACCGACACAACACAATT | 59.590 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
720 | 765 | 4.933400 | GGAGTATAACCGACACAACACAAT | 59.067 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
721 | 766 | 4.202233 | TGGAGTATAACCGACACAACACAA | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
722 | 767 | 3.321396 | TGGAGTATAACCGACACAACACA | 59.679 | 43.478 | 0.00 | 0.00 | 0.00 | 3.72 |
723 | 768 | 3.916761 | TGGAGTATAACCGACACAACAC | 58.083 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
724 | 769 | 4.382254 | GGATGGAGTATAACCGACACAACA | 60.382 | 45.833 | 0.00 | 0.00 | 0.00 | 3.33 |
725 | 770 | 4.117685 | GGATGGAGTATAACCGACACAAC | 58.882 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
726 | 771 | 3.181484 | CGGATGGAGTATAACCGACACAA | 60.181 | 47.826 | 0.00 | 0.00 | 45.31 | 3.33 |
727 | 772 | 2.359848 | CGGATGGAGTATAACCGACACA | 59.640 | 50.000 | 0.00 | 0.00 | 45.31 | 3.72 |
728 | 773 | 2.360165 | ACGGATGGAGTATAACCGACAC | 59.640 | 50.000 | 0.00 | 0.00 | 45.31 | 3.67 |
729 | 774 | 2.658285 | ACGGATGGAGTATAACCGACA | 58.342 | 47.619 | 0.00 | 0.00 | 45.31 | 4.35 |
730 | 775 | 3.722728 | AACGGATGGAGTATAACCGAC | 57.277 | 47.619 | 0.00 | 0.00 | 45.31 | 4.79 |
731 | 776 | 3.700539 | TGAAACGGATGGAGTATAACCGA | 59.299 | 43.478 | 0.00 | 0.00 | 45.31 | 4.69 |
733 | 778 | 9.886132 | ATATTATGAAACGGATGGAGTATAACC | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
739 | 784 | 7.819900 | GCTCTTATATTATGAAACGGATGGAGT | 59.180 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
740 | 785 | 7.009631 | CGCTCTTATATTATGAAACGGATGGAG | 59.990 | 40.741 | 0.00 | 0.00 | 0.00 | 3.86 |
741 | 786 | 6.811665 | CGCTCTTATATTATGAAACGGATGGA | 59.188 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
742 | 787 | 6.036083 | CCGCTCTTATATTATGAAACGGATGG | 59.964 | 42.308 | 0.00 | 0.00 | 35.47 | 3.51 |
743 | 788 | 6.590292 | ACCGCTCTTATATTATGAAACGGATG | 59.410 | 38.462 | 0.00 | 0.00 | 36.24 | 3.51 |
744 | 789 | 6.698380 | ACCGCTCTTATATTATGAAACGGAT | 58.302 | 36.000 | 0.00 | 0.00 | 36.24 | 4.18 |
745 | 790 | 6.092955 | ACCGCTCTTATATTATGAAACGGA | 57.907 | 37.500 | 0.00 | 0.00 | 36.24 | 4.69 |
746 | 791 | 6.780706 | AACCGCTCTTATATTATGAAACGG | 57.219 | 37.500 | 0.00 | 0.00 | 37.51 | 4.44 |
747 | 792 | 8.332464 | TCAAAACCGCTCTTATATTATGAAACG | 58.668 | 33.333 | 0.00 | 0.00 | 0.00 | 3.60 |
748 | 793 | 9.434559 | GTCAAAACCGCTCTTATATTATGAAAC | 57.565 | 33.333 | 0.00 | 0.00 | 0.00 | 2.78 |
749 | 794 | 9.168451 | TGTCAAAACCGCTCTTATATTATGAAA | 57.832 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
750 | 795 | 8.609176 | GTGTCAAAACCGCTCTTATATTATGAA | 58.391 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
751 | 796 | 7.042992 | CGTGTCAAAACCGCTCTTATATTATGA | 60.043 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
752 | 797 | 7.042992 | TCGTGTCAAAACCGCTCTTATATTATG | 60.043 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
753 | 798 | 6.982141 | TCGTGTCAAAACCGCTCTTATATTAT | 59.018 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
754 | 799 | 6.331845 | TCGTGTCAAAACCGCTCTTATATTA | 58.668 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
755 | 800 | 5.172934 | TCGTGTCAAAACCGCTCTTATATT | 58.827 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
756 | 801 | 4.751060 | TCGTGTCAAAACCGCTCTTATAT | 58.249 | 39.130 | 0.00 | 0.00 | 0.00 | 0.86 |
757 | 802 | 4.171005 | CTCGTGTCAAAACCGCTCTTATA | 58.829 | 43.478 | 0.00 | 0.00 | 0.00 | 0.98 |
758 | 803 | 2.993899 | CTCGTGTCAAAACCGCTCTTAT | 59.006 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
759 | 804 | 2.400399 | CTCGTGTCAAAACCGCTCTTA | 58.600 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
760 | 805 | 1.217882 | CTCGTGTCAAAACCGCTCTT | 58.782 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
761 | 806 | 0.600255 | CCTCGTGTCAAAACCGCTCT | 60.600 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
762 | 807 | 1.566018 | CCCTCGTGTCAAAACCGCTC | 61.566 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
763 | 808 | 1.597027 | CCCTCGTGTCAAAACCGCT | 60.597 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
764 | 809 | 1.566018 | CTCCCTCGTGTCAAAACCGC | 61.566 | 60.000 | 0.00 | 0.00 | 0.00 | 5.68 |
765 | 810 | 0.249741 | ACTCCCTCGTGTCAAAACCG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
766 | 811 | 2.825861 | TACTCCCTCGTGTCAAAACC | 57.174 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
767 | 812 | 4.514066 | ACAATTACTCCCTCGTGTCAAAAC | 59.486 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
768 | 813 | 4.710324 | ACAATTACTCCCTCGTGTCAAAA | 58.290 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
769 | 814 | 4.345859 | ACAATTACTCCCTCGTGTCAAA | 57.654 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
770 | 815 | 4.345859 | AACAATTACTCCCTCGTGTCAA | 57.654 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
771 | 816 | 4.345859 | AAACAATTACTCCCTCGTGTCA | 57.654 | 40.909 | 0.00 | 0.00 | 0.00 | 3.58 |
772 | 817 | 5.469084 | AGAAAAACAATTACTCCCTCGTGTC | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
773 | 818 | 5.374071 | AGAAAAACAATTACTCCCTCGTGT | 58.626 | 37.500 | 0.00 | 0.00 | 0.00 | 4.49 |
774 | 819 | 5.941948 | AGAAAAACAATTACTCCCTCGTG | 57.058 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
775 | 820 | 7.447594 | TCTAAGAAAAACAATTACTCCCTCGT | 58.552 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
776 | 821 | 7.900782 | TCTAAGAAAAACAATTACTCCCTCG | 57.099 | 36.000 | 0.00 | 0.00 | 0.00 | 4.63 |
777 | 822 | 9.232473 | ACATCTAAGAAAAACAATTACTCCCTC | 57.768 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
778 | 823 | 9.014297 | CACATCTAAGAAAAACAATTACTCCCT | 57.986 | 33.333 | 0.00 | 0.00 | 0.00 | 4.20 |
779 | 824 | 9.010029 | TCACATCTAAGAAAAACAATTACTCCC | 57.990 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
820 | 865 | 7.094762 | CCCACAAGACAATTTAACCTCTTCTAC | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
941 | 986 | 4.513406 | TTGGTAGTGGTGAAAACTTCCT | 57.487 | 40.909 | 0.00 | 0.00 | 36.39 | 3.36 |
963 | 1008 | 2.680352 | GCTGGGACTGGGAGACGA | 60.680 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
964 | 1009 | 3.775654 | GGCTGGGACTGGGAGACG | 61.776 | 72.222 | 0.00 | 0.00 | 0.00 | 4.18 |
965 | 1010 | 3.775654 | CGGCTGGGACTGGGAGAC | 61.776 | 72.222 | 0.00 | 0.00 | 0.00 | 3.36 |
971 | 1016 | 4.641645 | TGGTTGCGGCTGGGACTG | 62.642 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
972 | 1017 | 4.643387 | GTGGTTGCGGCTGGGACT | 62.643 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
973 | 1018 | 4.643387 | AGTGGTTGCGGCTGGGAC | 62.643 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
1076 | 1127 | 1.080354 | TAGTACAGGTGCTGGGGCT | 59.920 | 57.895 | 0.00 | 0.00 | 39.59 | 5.19 |
1079 | 1130 | 1.153628 | GCGTAGTACAGGTGCTGGG | 60.154 | 63.158 | 0.38 | 0.00 | 35.51 | 4.45 |
1082 | 1133 | 1.955080 | GATAGGCGTAGTACAGGTGCT | 59.045 | 52.381 | 0.38 | 0.00 | 0.00 | 4.40 |
1083 | 1134 | 1.000496 | GGATAGGCGTAGTACAGGTGC | 60.000 | 57.143 | 0.38 | 0.00 | 0.00 | 5.01 |
1084 | 1135 | 1.612463 | GGGATAGGCGTAGTACAGGTG | 59.388 | 57.143 | 0.38 | 0.00 | 0.00 | 4.00 |
1085 | 1136 | 1.816961 | CGGGATAGGCGTAGTACAGGT | 60.817 | 57.143 | 0.38 | 0.00 | 0.00 | 4.00 |
1086 | 1137 | 0.879765 | CGGGATAGGCGTAGTACAGG | 59.120 | 60.000 | 0.38 | 0.00 | 0.00 | 4.00 |
1087 | 1138 | 0.240411 | GCGGGATAGGCGTAGTACAG | 59.760 | 60.000 | 0.38 | 0.00 | 0.00 | 2.74 |
1088 | 1139 | 1.174712 | GGCGGGATAGGCGTAGTACA | 61.175 | 60.000 | 0.38 | 0.00 | 0.00 | 2.90 |
1386 | 1437 | 2.317609 | GCTGAGCGCGAGGTTGAAA | 61.318 | 57.895 | 12.10 | 0.00 | 45.11 | 2.69 |
1425 | 1476 | 2.428085 | GCGGAGAGGGAGGAGGAAC | 61.428 | 68.421 | 0.00 | 0.00 | 0.00 | 3.62 |
1526 | 1577 | 0.749454 | ATACGTAACCCCTCTCGCGT | 60.749 | 55.000 | 5.77 | 0.00 | 36.52 | 6.01 |
1527 | 1578 | 0.317603 | CATACGTAACCCCTCTCGCG | 60.318 | 60.000 | 0.00 | 0.00 | 0.00 | 5.87 |
1692 | 1743 | 5.827797 | GGCATCCAATCAGTCAATTACCTTA | 59.172 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1767 | 1818 | 1.396648 | CGCGCAACCAACATCATAGAA | 59.603 | 47.619 | 8.75 | 0.00 | 0.00 | 2.10 |
1786 | 1932 | 6.655003 | AGCTTACCAAATACATATCCAATCCG | 59.345 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
1842 | 1992 | 7.023575 | CGCTAAAAATTCAGTAGAACAGCAAT | 58.976 | 34.615 | 0.00 | 0.00 | 36.39 | 3.56 |
1848 | 1998 | 6.402226 | CCCAGTCGCTAAAAATTCAGTAGAAC | 60.402 | 42.308 | 0.00 | 0.00 | 36.39 | 3.01 |
1858 | 2008 | 3.950397 | TCATGACCCAGTCGCTAAAAAT | 58.050 | 40.909 | 0.00 | 0.00 | 34.95 | 1.82 |
1907 | 2057 | 4.641989 | ACTTCCTATGATCACACCAAATGC | 59.358 | 41.667 | 0.00 | 0.00 | 0.00 | 3.56 |
1965 | 2123 | 8.606830 | ACTAATCCTCACAACTCCTTTTAGATT | 58.393 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
2011 | 2169 | 1.202976 | AGTTCTTGACCTTGCCATGCT | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
2157 | 2409 | 1.910580 | GCGGTCCCTCTGGAAATGGA | 61.911 | 60.000 | 0.00 | 0.00 | 44.07 | 3.41 |
2159 | 2411 | 1.815421 | CGCGGTCCCTCTGGAAATG | 60.815 | 63.158 | 0.00 | 0.00 | 44.07 | 2.32 |
2184 | 2494 | 1.073706 | TTAGGCCTGATCCCCTCCC | 60.074 | 63.158 | 17.99 | 0.00 | 32.65 | 4.30 |
2187 | 2497 | 1.739750 | CATCTTAGGCCTGATCCCCT | 58.260 | 55.000 | 17.99 | 0.00 | 35.22 | 4.79 |
2190 | 2500 | 0.321122 | CCGCATCTTAGGCCTGATCC | 60.321 | 60.000 | 17.99 | 0.00 | 0.00 | 3.36 |
2194 | 2716 | 0.179000 | AAGTCCGCATCTTAGGCCTG | 59.821 | 55.000 | 17.99 | 0.00 | 0.00 | 4.85 |
2218 | 2758 | 5.551760 | AGTCTGCACTGCAACAATATTAC | 57.448 | 39.130 | 4.99 | 0.00 | 38.41 | 1.89 |
2235 | 2775 | 9.653287 | TCAATACCTCACTAACATAAAAGTCTG | 57.347 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
2322 | 2862 | 8.409371 | TGAGATAACTGATCAGTGATAACTGTC | 58.591 | 37.037 | 28.52 | 17.99 | 41.58 | 3.51 |
2354 | 2894 | 2.771328 | CTTTCAGACCCCTGGCACCC | 62.771 | 65.000 | 0.00 | 0.00 | 40.76 | 4.61 |
2362 | 2902 | 4.771054 | TCTAACTCTACACTTTCAGACCCC | 59.229 | 45.833 | 0.00 | 0.00 | 0.00 | 4.95 |
2390 | 2930 | 2.955614 | TCTAGGCTAAACACTTCGTGC | 58.044 | 47.619 | 0.00 | 0.00 | 36.98 | 5.34 |
2451 | 2991 | 4.415596 | TGAATAAGCCAGTTTGGAACCAT | 58.584 | 39.130 | 0.00 | 0.00 | 40.96 | 3.55 |
2535 | 3076 | 7.740805 | AGGGCTTTACTTATTTCCTGATCTAG | 58.259 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
2639 | 3180 | 5.248870 | AGGTGCGACAATTAATTTGGATC | 57.751 | 39.130 | 0.00 | 0.00 | 39.80 | 3.36 |
2667 | 3208 | 4.210537 | GTCGCAGCTTTAGTACAAAGTTGA | 59.789 | 41.667 | 24.54 | 11.75 | 39.74 | 3.18 |
2706 | 3464 | 8.259411 | TCGCATAACTAACTTTTTATACTCCCA | 58.741 | 33.333 | 0.00 | 0.00 | 0.00 | 4.37 |
2726 | 3484 | 9.811995 | ATTGTCTTTGTACTAGTAAATCGCATA | 57.188 | 29.630 | 3.61 | 0.00 | 0.00 | 3.14 |
2818 | 4385 | 1.079474 | TTCGCACTTCGCAGGCATA | 60.079 | 52.632 | 0.00 | 0.00 | 42.60 | 3.14 |
2924 | 4493 | 1.418637 | ACTCGGCTTGTTAAACCTCCA | 59.581 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
3003 | 4573 | 0.235926 | GTTTCTTGTGCACCGAGCTC | 59.764 | 55.000 | 15.69 | 2.73 | 45.94 | 4.09 |
3061 | 4631 | 2.293955 | TGTGGTCATGCTCACAAATGTG | 59.706 | 45.455 | 15.34 | 7.22 | 46.91 | 3.21 |
3065 | 4635 | 1.948834 | CTGTGTGGTCATGCTCACAAA | 59.051 | 47.619 | 18.07 | 13.81 | 44.19 | 2.83 |
3087 | 4657 | 6.680874 | AAACCACTAAATTCGTACAACACA | 57.319 | 33.333 | 0.00 | 0.00 | 0.00 | 3.72 |
3122 | 4692 | 4.782156 | AGAAGGGAACATGATCAGAGTCTT | 59.218 | 41.667 | 0.00 | 2.83 | 0.00 | 3.01 |
3136 | 4706 | 6.777213 | TCATAAGAGTCTACAGAAGGGAAC | 57.223 | 41.667 | 0.00 | 0.00 | 0.00 | 3.62 |
3185 | 4755 | 6.867550 | TGTCTATATATATGTGGCAGTCTGC | 58.132 | 40.000 | 16.93 | 16.93 | 44.08 | 4.26 |
3254 | 4824 | 4.748277 | TGTACAGTAGGGGATTAGCAAC | 57.252 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
3370 | 4940 | 6.239217 | TGAGAAATATAGCTGGCTCAAAGA | 57.761 | 37.500 | 0.00 | 0.00 | 30.26 | 2.52 |
3416 | 4988 | 1.611673 | CGGCTCCAATGTTCAGGTTCT | 60.612 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
3435 | 5007 | 1.995484 | CTCATCTGGCGCCATAATACG | 59.005 | 52.381 | 32.87 | 17.79 | 0.00 | 3.06 |
3450 | 5022 | 6.934645 | TCCCGTTAACAATTGGATATCTCATC | 59.065 | 38.462 | 10.83 | 0.00 | 0.00 | 2.92 |
3848 | 5455 | 5.922053 | TGTTCCATCATACTCCATCAAGAG | 58.078 | 41.667 | 0.00 | 0.00 | 39.91 | 2.85 |
3866 | 5473 | 4.932146 | AGCTGTTACACACAAATTGTTCC | 58.068 | 39.130 | 0.00 | 0.00 | 35.67 | 3.62 |
3920 | 5527 | 9.860650 | ACTATTTACAAATATGTATTCTGCCCA | 57.139 | 29.630 | 0.00 | 0.00 | 41.51 | 5.36 |
3963 | 5570 | 1.534697 | GGTGGTCTTTGGTGGTCCA | 59.465 | 57.895 | 0.00 | 0.00 | 42.66 | 4.02 |
3964 | 5571 | 1.599797 | CGGTGGTCTTTGGTGGTCC | 60.600 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
3965 | 5572 | 1.599797 | CCGGTGGTCTTTGGTGGTC | 60.600 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
4083 | 5690 | 9.979578 | AGAAAATGTGAATGCTACAAACATTTA | 57.020 | 25.926 | 11.26 | 0.00 | 45.75 | 1.40 |
4085 | 5692 | 8.891671 | AAGAAAATGTGAATGCTACAAACATT | 57.108 | 26.923 | 0.00 | 0.00 | 41.85 | 2.71 |
4184 | 5791 | 4.839668 | ATGAGTACATCTCTAAGCCGAC | 57.160 | 45.455 | 0.00 | 0.00 | 43.13 | 4.79 |
4196 | 5803 | 3.134804 | GGAGTTGCACCCTATGAGTACAT | 59.865 | 47.826 | 0.00 | 0.00 | 40.16 | 2.29 |
4201 | 5808 | 2.102252 | GAGAGGAGTTGCACCCTATGAG | 59.898 | 54.545 | 1.35 | 0.00 | 31.84 | 2.90 |
4202 | 5809 | 2.111384 | GAGAGGAGTTGCACCCTATGA | 58.889 | 52.381 | 1.35 | 0.00 | 31.84 | 2.15 |
4203 | 5810 | 1.139853 | GGAGAGGAGTTGCACCCTATG | 59.860 | 57.143 | 1.35 | 0.00 | 31.84 | 2.23 |
4218 | 5826 | 3.627577 | CCCAACCATCGTAATTTGGAGAG | 59.372 | 47.826 | 0.82 | 0.00 | 40.97 | 3.20 |
4219 | 5827 | 3.264706 | TCCCAACCATCGTAATTTGGAGA | 59.735 | 43.478 | 0.82 | 4.12 | 40.97 | 3.71 |
4220 | 5828 | 3.616219 | TCCCAACCATCGTAATTTGGAG | 58.384 | 45.455 | 0.82 | 0.00 | 40.97 | 3.86 |
4267 | 5875 | 2.109126 | GTGGATGGCCTGCGAAGTC | 61.109 | 63.158 | 3.32 | 0.00 | 34.31 | 3.01 |
4313 | 5980 | 3.071747 | TCTTACATTTGCCCCCAAAAACC | 59.928 | 43.478 | 0.00 | 0.00 | 43.58 | 3.27 |
4318 | 5985 | 5.199982 | TCTTATCTTACATTTGCCCCCAA | 57.800 | 39.130 | 0.00 | 0.00 | 0.00 | 4.12 |
4322 | 5989 | 5.385198 | TCCCATCTTATCTTACATTTGCCC | 58.615 | 41.667 | 0.00 | 0.00 | 0.00 | 5.36 |
4351 | 6018 | 1.086696 | CATGTCCTTGGGCGTACAAG | 58.913 | 55.000 | 12.42 | 12.42 | 45.71 | 3.16 |
4374 | 6041 | 1.142465 | CATGTCAAGGATGCCTAGGCT | 59.858 | 52.381 | 33.07 | 19.27 | 42.51 | 4.58 |
4388 | 6055 | 3.063316 | CACGTGCGAATTTATCCATGTCA | 59.937 | 43.478 | 0.82 | 0.00 | 30.67 | 3.58 |
4419 | 6086 | 0.482446 | ACCAACCAAGGCCATCTGAA | 59.518 | 50.000 | 5.01 | 0.00 | 0.00 | 3.02 |
4448 | 6115 | 2.106566 | TCAACCCAAGCTCTTTTTGCA | 58.893 | 42.857 | 0.00 | 0.00 | 0.00 | 4.08 |
4451 | 6118 | 4.444733 | CCCAAATCAACCCAAGCTCTTTTT | 60.445 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
4452 | 6119 | 3.071457 | CCCAAATCAACCCAAGCTCTTTT | 59.929 | 43.478 | 0.00 | 0.00 | 0.00 | 2.27 |
4484 | 6151 | 6.505048 | AATATCACCATGTCCTCTTCATCA | 57.495 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
4501 | 6168 | 7.774625 | TGATGGAAGTGCACTCATAAAATATCA | 59.225 | 33.333 | 21.95 | 16.73 | 0.00 | 2.15 |
4503 | 6170 | 7.013655 | GGTGATGGAAGTGCACTCATAAAATAT | 59.986 | 37.037 | 21.95 | 0.00 | 33.25 | 1.28 |
4505 | 6172 | 5.126061 | GGTGATGGAAGTGCACTCATAAAAT | 59.874 | 40.000 | 21.95 | 8.36 | 33.25 | 1.82 |
4529 | 6196 | 1.008995 | CCTTTGTCGGTTGCCAACG | 60.009 | 57.895 | 0.74 | 0.00 | 0.00 | 4.10 |
4539 | 6206 | 1.160137 | CAGAAAGAGGCCCTTTGTCG | 58.840 | 55.000 | 19.97 | 9.85 | 44.63 | 4.35 |
4541 | 6208 | 0.540597 | GCCAGAAAGAGGCCCTTTGT | 60.541 | 55.000 | 19.97 | 14.76 | 44.63 | 2.83 |
4586 | 6253 | 0.616111 | AGGGAGCGATGTCTTCTGGT | 60.616 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4590 | 6257 | 0.755686 | ATGGAGGGAGCGATGTCTTC | 59.244 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
4625 | 6292 | 2.794103 | TGGATGGTGTCATTCTTGTGG | 58.206 | 47.619 | 0.00 | 0.00 | 32.98 | 4.17 |
4685 | 6352 | 4.344679 | TCAATTGTGAGCCCAGAATTTGTT | 59.655 | 37.500 | 5.13 | 0.00 | 41.66 | 2.83 |
4707 | 6374 | 5.931146 | CCTGATAGTATTCAAGGATGTGCTC | 59.069 | 44.000 | 2.69 | 0.00 | 0.00 | 4.26 |
4728 | 6395 | 1.003812 | TCGTAATCCAACCCCAACCTG | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
4731 | 6398 | 2.629051 | CTCTCGTAATCCAACCCCAAC | 58.371 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
4734 | 6401 | 1.138464 | GACCTCTCGTAATCCAACCCC | 59.862 | 57.143 | 0.00 | 0.00 | 0.00 | 4.95 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.