Multiple sequence alignment - TraesCS5B01G504800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G504800 | chr5B | 100.000 | 2390 | 0 | 0 | 1 | 2390 | 670799274 | 670796885 | 0.000000e+00 | 4414.0 |
1 | TraesCS5B01G504800 | chr5B | 96.033 | 857 | 23 | 3 | 1 | 847 | 7027950 | 7028805 | 0.000000e+00 | 1384.0 |
2 | TraesCS5B01G504800 | chr5B | 95.558 | 833 | 26 | 3 | 27 | 849 | 377343098 | 377342267 | 0.000000e+00 | 1323.0 |
3 | TraesCS5B01G504800 | chr5B | 95.921 | 760 | 20 | 6 | 99 | 848 | 64726396 | 64727154 | 0.000000e+00 | 1221.0 |
4 | TraesCS5B01G504800 | chr5B | 82.064 | 591 | 63 | 24 | 852 | 1408 | 670694847 | 670694266 | 4.650000e-127 | 464.0 |
5 | TraesCS5B01G504800 | chr5B | 82.143 | 476 | 62 | 14 | 852 | 1309 | 670716941 | 670716471 | 1.040000e-103 | 387.0 |
6 | TraesCS5B01G504800 | chr7B | 95.804 | 858 | 25 | 3 | 1 | 848 | 695289637 | 695290493 | 0.000000e+00 | 1375.0 |
7 | TraesCS5B01G504800 | chr7B | 95.416 | 829 | 26 | 4 | 27 | 845 | 684941422 | 684942248 | 0.000000e+00 | 1310.0 |
8 | TraesCS5B01G504800 | chr6B | 95.470 | 861 | 28 | 3 | 1 | 851 | 497220051 | 497220910 | 0.000000e+00 | 1363.0 |
9 | TraesCS5B01G504800 | chr6B | 82.377 | 244 | 27 | 6 | 2143 | 2375 | 120801321 | 120801083 | 5.210000e-47 | 198.0 |
10 | TraesCS5B01G504800 | chr6B | 87.037 | 54 | 3 | 3 | 2066 | 2118 | 48558240 | 48558290 | 9.230000e-05 | 58.4 |
11 | TraesCS5B01G504800 | chr1B | 95.571 | 858 | 27 | 3 | 1 | 848 | 66281028 | 66281884 | 0.000000e+00 | 1363.0 |
12 | TraesCS5B01G504800 | chr1B | 95.476 | 862 | 25 | 5 | 1 | 849 | 565940969 | 565940109 | 0.000000e+00 | 1363.0 |
13 | TraesCS5B01G504800 | chr1B | 96.894 | 161 | 4 | 1 | 1 | 161 | 329301450 | 329301291 | 3.920000e-68 | 268.0 |
14 | TraesCS5B01G504800 | chr2B | 95.343 | 859 | 28 | 4 | 1 | 849 | 233043278 | 233042422 | 0.000000e+00 | 1354.0 |
15 | TraesCS5B01G504800 | chr2B | 95.000 | 860 | 32 | 3 | 1 | 850 | 94094923 | 94094065 | 0.000000e+00 | 1339.0 |
16 | TraesCS5B01G504800 | chr2B | 88.259 | 247 | 7 | 1 | 4 | 250 | 701767156 | 701766932 | 2.340000e-70 | 276.0 |
17 | TraesCS5B01G504800 | chr3B | 96.158 | 833 | 21 | 3 | 27 | 849 | 224282825 | 224283656 | 0.000000e+00 | 1351.0 |
18 | TraesCS5B01G504800 | chr3B | 95.511 | 802 | 25 | 4 | 59 | 850 | 734988903 | 734989703 | 0.000000e+00 | 1271.0 |
19 | TraesCS5B01G504800 | chr3B | 93.993 | 849 | 26 | 4 | 1 | 848 | 56338217 | 56339041 | 0.000000e+00 | 1262.0 |
20 | TraesCS5B01G504800 | chr3B | 78.516 | 256 | 38 | 11 | 2129 | 2376 | 518997996 | 518998242 | 4.110000e-33 | 152.0 |
21 | TraesCS5B01G504800 | chr5D | 80.376 | 1065 | 95 | 48 | 852 | 1893 | 531462799 | 531461826 | 0.000000e+00 | 704.0 |
22 | TraesCS5B01G504800 | chr5D | 85.036 | 695 | 43 | 27 | 846 | 1507 | 531476621 | 531475955 | 0.000000e+00 | 651.0 |
23 | TraesCS5B01G504800 | chr5D | 82.111 | 559 | 57 | 19 | 885 | 1408 | 531412236 | 531411686 | 2.820000e-119 | 438.0 |
24 | TraesCS5B01G504800 | chr5D | 81.092 | 476 | 59 | 19 | 852 | 1309 | 531445257 | 531444795 | 3.780000e-93 | 351.0 |
25 | TraesCS5B01G504800 | chr5D | 82.731 | 249 | 33 | 8 | 2131 | 2370 | 103602708 | 103602461 | 1.860000e-51 | 213.0 |
26 | TraesCS5B01G504800 | chr5D | 82.474 | 194 | 22 | 3 | 995 | 1188 | 531416326 | 531416145 | 2.460000e-35 | 159.0 |
27 | TraesCS5B01G504800 | chr5D | 88.596 | 114 | 9 | 3 | 1924 | 2034 | 531461829 | 531461717 | 4.140000e-28 | 135.0 |
28 | TraesCS5B01G504800 | chr4A | 81.540 | 818 | 73 | 33 | 865 | 1652 | 640921977 | 640922746 | 9.450000e-169 | 603.0 |
29 | TraesCS5B01G504800 | chr4A | 86.729 | 535 | 26 | 14 | 846 | 1344 | 640916338 | 640916863 | 9.650000e-154 | 553.0 |
30 | TraesCS5B01G504800 | chr4A | 85.401 | 411 | 39 | 10 | 995 | 1390 | 641000223 | 641000627 | 7.950000e-110 | 407.0 |
31 | TraesCS5B01G504800 | chr4A | 81.304 | 460 | 56 | 17 | 866 | 1297 | 640944730 | 640945187 | 1.760000e-91 | 346.0 |
32 | TraesCS5B01G504800 | chr6D | 80.347 | 346 | 37 | 20 | 2060 | 2390 | 50674281 | 50674610 | 1.430000e-57 | 233.0 |
33 | TraesCS5B01G504800 | chr6D | 76.991 | 113 | 16 | 6 | 2063 | 2173 | 26360468 | 26360572 | 3.320000e-04 | 56.5 |
34 | TraesCS5B01G504800 | chr5A | 80.368 | 326 | 47 | 8 | 2064 | 2387 | 34709872 | 34710182 | 5.140000e-57 | 231.0 |
35 | TraesCS5B01G504800 | chr5A | 78.134 | 343 | 45 | 12 | 2060 | 2387 | 94800250 | 94800577 | 8.720000e-45 | 191.0 |
36 | TraesCS5B01G504800 | chr5A | 80.682 | 264 | 34 | 14 | 2106 | 2359 | 111608319 | 111608063 | 3.140000e-44 | 189.0 |
37 | TraesCS5B01G504800 | chr3D | 79.701 | 335 | 56 | 9 | 2060 | 2390 | 591608992 | 591608666 | 5.140000e-57 | 231.0 |
38 | TraesCS5B01G504800 | chr3D | 79.341 | 334 | 53 | 10 | 2060 | 2390 | 485140017 | 485140337 | 1.110000e-53 | 220.0 |
39 | TraesCS5B01G504800 | chr3A | 77.083 | 336 | 55 | 12 | 2060 | 2386 | 722498565 | 722498887 | 8.780000e-40 | 174.0 |
40 | TraesCS5B01G504800 | chr2D | 84.932 | 146 | 16 | 6 | 2248 | 2390 | 537221944 | 537221802 | 2.480000e-30 | 143.0 |
41 | TraesCS5B01G504800 | chr2D | 90.196 | 51 | 4 | 1 | 2070 | 2119 | 537222177 | 537222127 | 5.510000e-07 | 65.8 |
42 | TraesCS5B01G504800 | chr2D | 77.570 | 107 | 18 | 6 | 2067 | 2173 | 484475309 | 484475209 | 2.570000e-05 | 60.2 |
43 | TraesCS5B01G504800 | chr7A | 100.000 | 30 | 0 | 0 | 2065 | 2094 | 8598402 | 8598431 | 3.320000e-04 | 56.5 |
44 | TraesCS5B01G504800 | chr4B | 90.698 | 43 | 2 | 2 | 2067 | 2109 | 620947623 | 620947663 | 3.320000e-04 | 56.5 |
45 | TraesCS5B01G504800 | chr7D | 100.000 | 29 | 0 | 0 | 2065 | 2093 | 7798806 | 7798834 | 1.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G504800 | chr5B | 670796885 | 670799274 | 2389 | True | 4414.0 | 4414 | 100.0000 | 1 | 2390 | 1 | chr5B.!!$R4 | 2389 |
1 | TraesCS5B01G504800 | chr5B | 7027950 | 7028805 | 855 | False | 1384.0 | 1384 | 96.0330 | 1 | 847 | 1 | chr5B.!!$F1 | 846 |
2 | TraesCS5B01G504800 | chr5B | 377342267 | 377343098 | 831 | True | 1323.0 | 1323 | 95.5580 | 27 | 849 | 1 | chr5B.!!$R1 | 822 |
3 | TraesCS5B01G504800 | chr5B | 64726396 | 64727154 | 758 | False | 1221.0 | 1221 | 95.9210 | 99 | 848 | 1 | chr5B.!!$F2 | 749 |
4 | TraesCS5B01G504800 | chr5B | 670694266 | 670694847 | 581 | True | 464.0 | 464 | 82.0640 | 852 | 1408 | 1 | chr5B.!!$R2 | 556 |
5 | TraesCS5B01G504800 | chr7B | 695289637 | 695290493 | 856 | False | 1375.0 | 1375 | 95.8040 | 1 | 848 | 1 | chr7B.!!$F2 | 847 |
6 | TraesCS5B01G504800 | chr7B | 684941422 | 684942248 | 826 | False | 1310.0 | 1310 | 95.4160 | 27 | 845 | 1 | chr7B.!!$F1 | 818 |
7 | TraesCS5B01G504800 | chr6B | 497220051 | 497220910 | 859 | False | 1363.0 | 1363 | 95.4700 | 1 | 851 | 1 | chr6B.!!$F2 | 850 |
8 | TraesCS5B01G504800 | chr1B | 66281028 | 66281884 | 856 | False | 1363.0 | 1363 | 95.5710 | 1 | 848 | 1 | chr1B.!!$F1 | 847 |
9 | TraesCS5B01G504800 | chr1B | 565940109 | 565940969 | 860 | True | 1363.0 | 1363 | 95.4760 | 1 | 849 | 1 | chr1B.!!$R2 | 848 |
10 | TraesCS5B01G504800 | chr2B | 233042422 | 233043278 | 856 | True | 1354.0 | 1354 | 95.3430 | 1 | 849 | 1 | chr2B.!!$R2 | 848 |
11 | TraesCS5B01G504800 | chr2B | 94094065 | 94094923 | 858 | True | 1339.0 | 1339 | 95.0000 | 1 | 850 | 1 | chr2B.!!$R1 | 849 |
12 | TraesCS5B01G504800 | chr3B | 224282825 | 224283656 | 831 | False | 1351.0 | 1351 | 96.1580 | 27 | 849 | 1 | chr3B.!!$F2 | 822 |
13 | TraesCS5B01G504800 | chr3B | 734988903 | 734989703 | 800 | False | 1271.0 | 1271 | 95.5110 | 59 | 850 | 1 | chr3B.!!$F4 | 791 |
14 | TraesCS5B01G504800 | chr3B | 56338217 | 56339041 | 824 | False | 1262.0 | 1262 | 93.9930 | 1 | 848 | 1 | chr3B.!!$F1 | 847 |
15 | TraesCS5B01G504800 | chr5D | 531475955 | 531476621 | 666 | True | 651.0 | 651 | 85.0360 | 846 | 1507 | 1 | chr5D.!!$R3 | 661 |
16 | TraesCS5B01G504800 | chr5D | 531461717 | 531462799 | 1082 | True | 419.5 | 704 | 84.4860 | 852 | 2034 | 2 | chr5D.!!$R5 | 1182 |
17 | TraesCS5B01G504800 | chr5D | 531411686 | 531416326 | 4640 | True | 298.5 | 438 | 82.2925 | 885 | 1408 | 2 | chr5D.!!$R4 | 523 |
18 | TraesCS5B01G504800 | chr4A | 640921977 | 640922746 | 769 | False | 603.0 | 603 | 81.5400 | 865 | 1652 | 1 | chr4A.!!$F2 | 787 |
19 | TraesCS5B01G504800 | chr4A | 640916338 | 640916863 | 525 | False | 553.0 | 553 | 86.7290 | 846 | 1344 | 1 | chr4A.!!$F1 | 498 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
932 | 4140 | 0.71167 | CGCACGCGCTTACTCTTTTA | 59.288 | 50.0 | 5.73 | 0.0 | 35.3 | 1.52 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2294 | 5604 | 0.035458 | AACCCAGCTTCGACTTCAGG | 59.965 | 55.0 | 0.0 | 0.0 | 0.0 | 3.86 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
148 | 180 | 4.100084 | CCCGATGCAGCAGGACCA | 62.100 | 66.667 | 13.25 | 0.00 | 0.00 | 4.02 |
205 | 246 | 1.692749 | GGGGTAGCAGGATGGGTCA | 60.693 | 63.158 | 0.00 | 0.00 | 35.86 | 4.02 |
215 | 256 | 1.639635 | GGATGGGTCAGTGGATGCCT | 61.640 | 60.000 | 0.00 | 0.00 | 0.00 | 4.75 |
350 | 392 | 1.542375 | AGGTCTTGGATGCTGGGGT | 60.542 | 57.895 | 0.00 | 0.00 | 0.00 | 4.95 |
770 | 816 | 3.568743 | GTGCGTGTGTTGCGGTGA | 61.569 | 61.111 | 0.00 | 0.00 | 34.24 | 4.02 |
868 | 914 | 2.201436 | CTCTCCGCTACGCCGCATAT | 62.201 | 60.000 | 0.00 | 0.00 | 0.00 | 1.78 |
926 | 4134 | 2.805353 | CTCACGCACGCGCTTACT | 60.805 | 61.111 | 12.02 | 0.00 | 44.19 | 2.24 |
927 | 4135 | 2.778997 | CTCACGCACGCGCTTACTC | 61.779 | 63.158 | 12.02 | 0.00 | 44.19 | 2.59 |
928 | 4136 | 2.805353 | CACGCACGCGCTTACTCT | 60.805 | 61.111 | 12.02 | 0.00 | 44.19 | 3.24 |
929 | 4137 | 2.049433 | ACGCACGCGCTTACTCTT | 60.049 | 55.556 | 12.02 | 0.00 | 44.19 | 2.85 |
930 | 4138 | 1.663702 | ACGCACGCGCTTACTCTTT | 60.664 | 52.632 | 12.02 | 0.00 | 44.19 | 2.52 |
931 | 4139 | 1.219522 | ACGCACGCGCTTACTCTTTT | 61.220 | 50.000 | 12.02 | 0.00 | 44.19 | 2.27 |
932 | 4140 | 0.711670 | CGCACGCGCTTACTCTTTTA | 59.288 | 50.000 | 5.73 | 0.00 | 35.30 | 1.52 |
933 | 4141 | 1.323534 | CGCACGCGCTTACTCTTTTAT | 59.676 | 47.619 | 5.73 | 0.00 | 35.30 | 1.40 |
988 | 4224 | 1.216444 | CGAGCAGAGTTAGCCAGCA | 59.784 | 57.895 | 0.00 | 0.00 | 0.00 | 4.41 |
1053 | 4300 | 0.319641 | GGGAGAATACGATGGCGACC | 60.320 | 60.000 | 0.00 | 0.00 | 41.64 | 4.79 |
1408 | 4682 | 0.246635 | GGCAGGTCGTGAGCTAGAAA | 59.753 | 55.000 | 0.63 | 0.00 | 37.39 | 2.52 |
1409 | 4683 | 1.134670 | GGCAGGTCGTGAGCTAGAAAT | 60.135 | 52.381 | 0.63 | 0.00 | 37.39 | 2.17 |
1410 | 4684 | 2.100916 | GGCAGGTCGTGAGCTAGAAATA | 59.899 | 50.000 | 0.63 | 0.00 | 37.39 | 1.40 |
1411 | 4685 | 3.376540 | GCAGGTCGTGAGCTAGAAATAG | 58.623 | 50.000 | 0.63 | 0.00 | 37.39 | 1.73 |
1413 | 4687 | 4.440250 | GCAGGTCGTGAGCTAGAAATAGAA | 60.440 | 45.833 | 0.63 | 0.00 | 37.39 | 2.10 |
1414 | 4688 | 5.737635 | GCAGGTCGTGAGCTAGAAATAGAAT | 60.738 | 44.000 | 0.63 | 0.00 | 37.39 | 2.40 |
1415 | 4689 | 6.515200 | GCAGGTCGTGAGCTAGAAATAGAATA | 60.515 | 42.308 | 0.63 | 0.00 | 37.39 | 1.75 |
1416 | 4690 | 7.081349 | CAGGTCGTGAGCTAGAAATAGAATAG | 58.919 | 42.308 | 0.63 | 0.00 | 37.39 | 1.73 |
1420 | 4694 | 9.176181 | GTCGTGAGCTAGAAATAGAATAGAAAG | 57.824 | 37.037 | 0.00 | 0.00 | 0.00 | 2.62 |
1422 | 4696 | 9.737427 | CGTGAGCTAGAAATAGAATAGAAAGAA | 57.263 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
1431 | 4706 | 8.675040 | AAATAGAATAGAAAGAAAGCAAACGC | 57.325 | 30.769 | 0.00 | 0.00 | 0.00 | 4.84 |
1454 | 4729 | 1.662044 | GCCCACTTGTTGGCTTCTG | 59.338 | 57.895 | 8.40 | 0.00 | 45.37 | 3.02 |
1481 | 4762 | 3.703286 | ACTTTGGGACGCTGTAAAAAC | 57.297 | 42.857 | 0.00 | 0.00 | 0.00 | 2.43 |
1570 | 4871 | 4.065088 | GAGATTCAGTGGTGTTAACTGCA | 58.935 | 43.478 | 7.22 | 0.00 | 43.88 | 4.41 |
1586 | 4887 | 0.112995 | TGCATTTGGAGAAGCTGGGT | 59.887 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
1613 | 4914 | 7.410407 | GCCACTAACACGCAAAGATTTTTATTC | 60.410 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
1637 | 4940 | 5.461526 | GGTTGGCTCTTTTGTACAGAATTC | 58.538 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
1661 | 4969 | 2.845797 | TCTGATCCCAGATCAGGCC | 58.154 | 57.895 | 26.35 | 0.00 | 44.01 | 5.19 |
1665 | 4973 | 2.408880 | GATCCCAGATCAGGCCTGCC | 62.409 | 65.000 | 28.91 | 20.87 | 0.00 | 4.85 |
1673 | 4981 | 1.826720 | GATCAGGCCTGCCATTCAAAA | 59.173 | 47.619 | 28.91 | 7.75 | 38.92 | 2.44 |
1674 | 4982 | 1.714541 | TCAGGCCTGCCATTCAAAAA | 58.285 | 45.000 | 28.91 | 3.28 | 38.92 | 1.94 |
1675 | 4983 | 1.344114 | TCAGGCCTGCCATTCAAAAAC | 59.656 | 47.619 | 28.91 | 0.00 | 38.92 | 2.43 |
1679 | 4987 | 1.866601 | GCCTGCCATTCAAAAACACAC | 59.133 | 47.619 | 0.00 | 0.00 | 0.00 | 3.82 |
1686 | 4994 | 1.997669 | TTCAAAAACACACGTTGCCC | 58.002 | 45.000 | 0.00 | 0.00 | 34.86 | 5.36 |
1702 | 5010 | 2.311463 | TGCCCTGCTATCTCTGTCTAC | 58.689 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
1703 | 5011 | 1.268352 | GCCCTGCTATCTCTGTCTACG | 59.732 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
1704 | 5012 | 2.577700 | CCCTGCTATCTCTGTCTACGT | 58.422 | 52.381 | 0.00 | 0.00 | 0.00 | 3.57 |
1705 | 5013 | 3.741249 | CCCTGCTATCTCTGTCTACGTA | 58.259 | 50.000 | 0.00 | 0.00 | 0.00 | 3.57 |
1706 | 5014 | 3.499157 | CCCTGCTATCTCTGTCTACGTAC | 59.501 | 52.174 | 0.00 | 0.00 | 0.00 | 3.67 |
1707 | 5015 | 4.127907 | CCTGCTATCTCTGTCTACGTACA | 58.872 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
1708 | 5016 | 4.575236 | CCTGCTATCTCTGTCTACGTACAA | 59.425 | 45.833 | 0.00 | 0.00 | 0.00 | 2.41 |
1709 | 5017 | 5.277586 | CCTGCTATCTCTGTCTACGTACAAG | 60.278 | 48.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1710 | 5018 | 5.425630 | TGCTATCTCTGTCTACGTACAAGA | 58.574 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
1711 | 5019 | 5.524281 | TGCTATCTCTGTCTACGTACAAGAG | 59.476 | 44.000 | 14.23 | 14.23 | 0.00 | 2.85 |
1712 | 5020 | 5.524646 | GCTATCTCTGTCTACGTACAAGAGT | 59.475 | 44.000 | 17.56 | 11.20 | 31.84 | 3.24 |
1713 | 5021 | 6.700960 | GCTATCTCTGTCTACGTACAAGAGTA | 59.299 | 42.308 | 17.56 | 11.55 | 31.84 | 2.59 |
1714 | 5022 | 7.224362 | GCTATCTCTGTCTACGTACAAGAGTAA | 59.776 | 40.741 | 17.56 | 10.23 | 31.84 | 2.24 |
1715 | 5023 | 7.918536 | ATCTCTGTCTACGTACAAGAGTAAA | 57.081 | 36.000 | 17.56 | 5.91 | 31.84 | 2.01 |
1716 | 5024 | 7.734924 | TCTCTGTCTACGTACAAGAGTAAAA | 57.265 | 36.000 | 17.56 | 3.47 | 31.84 | 1.52 |
1717 | 5025 | 7.804712 | TCTCTGTCTACGTACAAGAGTAAAAG | 58.195 | 38.462 | 17.56 | 0.00 | 31.84 | 2.27 |
1718 | 5026 | 7.443575 | TCTCTGTCTACGTACAAGAGTAAAAGT | 59.556 | 37.037 | 17.56 | 0.00 | 31.84 | 2.66 |
1727 | 5035 | 7.091443 | CGTACAAGAGTAAAAGTGGAAGAGAT | 58.909 | 38.462 | 0.00 | 0.00 | 30.67 | 2.75 |
1746 | 5054 | 3.322254 | AGATAACGGACCACATCCTCATC | 59.678 | 47.826 | 0.00 | 0.00 | 46.69 | 2.92 |
1761 | 5069 | 4.040047 | TCCTCATCCAGTCCAATGTGTAT | 58.960 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
1762 | 5070 | 4.132336 | CCTCATCCAGTCCAATGTGTATG | 58.868 | 47.826 | 0.00 | 0.00 | 0.00 | 2.39 |
1766 | 5074 | 4.406648 | TCCAGTCCAATGTGTATGCTAG | 57.593 | 45.455 | 0.00 | 0.00 | 0.00 | 3.42 |
1767 | 5075 | 4.030216 | TCCAGTCCAATGTGTATGCTAGA | 58.970 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
1768 | 5076 | 4.100035 | TCCAGTCCAATGTGTATGCTAGAG | 59.900 | 45.833 | 0.00 | 0.00 | 0.00 | 2.43 |
1769 | 5077 | 3.806521 | CAGTCCAATGTGTATGCTAGAGC | 59.193 | 47.826 | 0.00 | 0.00 | 42.50 | 4.09 |
1770 | 5078 | 3.708631 | AGTCCAATGTGTATGCTAGAGCT | 59.291 | 43.478 | 2.72 | 0.00 | 42.66 | 4.09 |
1792 | 5100 | 3.614092 | AGACAGACTTGGCATATGGTTG | 58.386 | 45.455 | 4.56 | 0.00 | 33.45 | 3.77 |
1803 | 5111 | 4.307443 | GCATATGGTTGCCTTCTTAACC | 57.693 | 45.455 | 4.56 | 0.00 | 45.15 | 2.85 |
1804 | 5112 | 3.068165 | GCATATGGTTGCCTTCTTAACCC | 59.932 | 47.826 | 4.56 | 0.00 | 44.48 | 4.11 |
1805 | 5113 | 2.990740 | ATGGTTGCCTTCTTAACCCA | 57.009 | 45.000 | 0.00 | 0.00 | 44.48 | 4.51 |
1806 | 5114 | 2.990740 | TGGTTGCCTTCTTAACCCAT | 57.009 | 45.000 | 0.00 | 0.00 | 44.48 | 4.00 |
1807 | 5115 | 3.252554 | TGGTTGCCTTCTTAACCCATT | 57.747 | 42.857 | 0.00 | 0.00 | 44.48 | 3.16 |
1808 | 5116 | 3.582164 | TGGTTGCCTTCTTAACCCATTT | 58.418 | 40.909 | 0.00 | 0.00 | 44.48 | 2.32 |
1809 | 5117 | 3.576550 | TGGTTGCCTTCTTAACCCATTTC | 59.423 | 43.478 | 0.00 | 0.00 | 44.48 | 2.17 |
1810 | 5118 | 3.056107 | GGTTGCCTTCTTAACCCATTTCC | 60.056 | 47.826 | 0.00 | 0.00 | 40.31 | 3.13 |
1811 | 5119 | 2.815158 | TGCCTTCTTAACCCATTTCCC | 58.185 | 47.619 | 0.00 | 0.00 | 0.00 | 3.97 |
1812 | 5120 | 2.381961 | TGCCTTCTTAACCCATTTCCCT | 59.618 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
1817 | 5125 | 2.093128 | TCTTAACCCATTTCCCTCTCGC | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
1826 | 5134 | 0.104855 | TTCCCTCTCGCAATGATCCG | 59.895 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1828 | 5136 | 0.598680 | CCCTCTCGCAATGATCCGAC | 60.599 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1840 | 5148 | 1.209504 | TGATCCGACCATCCAAACTCC | 59.790 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
1844 | 5152 | 0.734889 | CGACCATCCAAACTCCATGC | 59.265 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 |
1853 | 5161 | 2.513753 | CAAACTCCATGCACACCCTTA | 58.486 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
1858 | 5166 | 3.010584 | ACTCCATGCACACCCTTAAGAAT | 59.989 | 43.478 | 3.36 | 0.00 | 0.00 | 2.40 |
1878 | 5186 | 5.950549 | AGAATCGGTGGTTAAGAACTAGAGA | 59.049 | 40.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1884 | 5192 | 5.336610 | GGTGGTTAAGAACTAGAGAGGTGAC | 60.337 | 48.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1893 | 5201 | 3.596956 | ACTAGAGAGGTGACCCCTAAAGA | 59.403 | 47.826 | 0.00 | 0.00 | 46.51 | 2.52 |
1894 | 5202 | 3.108847 | AGAGAGGTGACCCCTAAAGAG | 57.891 | 52.381 | 0.00 | 0.00 | 46.51 | 2.85 |
1895 | 5203 | 2.655407 | AGAGAGGTGACCCCTAAAGAGA | 59.345 | 50.000 | 0.00 | 0.00 | 46.51 | 3.10 |
1896 | 5204 | 3.077695 | AGAGAGGTGACCCCTAAAGAGAA | 59.922 | 47.826 | 0.00 | 0.00 | 46.51 | 2.87 |
1897 | 5205 | 3.174779 | AGAGGTGACCCCTAAAGAGAAC | 58.825 | 50.000 | 0.00 | 0.00 | 46.51 | 3.01 |
1898 | 5206 | 2.904434 | GAGGTGACCCCTAAAGAGAACA | 59.096 | 50.000 | 0.00 | 0.00 | 46.51 | 3.18 |
1899 | 5207 | 3.519913 | GAGGTGACCCCTAAAGAGAACAT | 59.480 | 47.826 | 0.00 | 0.00 | 46.51 | 2.71 |
1900 | 5208 | 3.916989 | AGGTGACCCCTAAAGAGAACATT | 59.083 | 43.478 | 0.00 | 0.00 | 43.87 | 2.71 |
1901 | 5209 | 4.354087 | AGGTGACCCCTAAAGAGAACATTT | 59.646 | 41.667 | 0.00 | 0.00 | 43.87 | 2.32 |
1902 | 5210 | 4.700692 | GGTGACCCCTAAAGAGAACATTTC | 59.299 | 45.833 | 0.00 | 0.00 | 0.00 | 2.17 |
1903 | 5211 | 4.392138 | GTGACCCCTAAAGAGAACATTTCG | 59.608 | 45.833 | 0.00 | 0.00 | 34.02 | 3.46 |
1904 | 5212 | 3.344515 | ACCCCTAAAGAGAACATTTCGC | 58.655 | 45.455 | 0.00 | 0.00 | 34.02 | 4.70 |
1905 | 5213 | 3.244770 | ACCCCTAAAGAGAACATTTCGCA | 60.245 | 43.478 | 0.00 | 0.00 | 34.02 | 5.10 |
1906 | 5214 | 3.756434 | CCCCTAAAGAGAACATTTCGCAA | 59.244 | 43.478 | 0.00 | 0.00 | 34.02 | 4.85 |
1907 | 5215 | 4.217550 | CCCCTAAAGAGAACATTTCGCAAA | 59.782 | 41.667 | 0.00 | 0.00 | 34.02 | 3.68 |
1908 | 5216 | 5.278758 | CCCCTAAAGAGAACATTTCGCAAAA | 60.279 | 40.000 | 0.00 | 0.00 | 34.02 | 2.44 |
1909 | 5217 | 6.212955 | CCCTAAAGAGAACATTTCGCAAAAA | 58.787 | 36.000 | 0.00 | 0.00 | 34.02 | 1.94 |
1910 | 5218 | 6.363357 | CCCTAAAGAGAACATTTCGCAAAAAG | 59.637 | 38.462 | 0.00 | 0.00 | 34.02 | 2.27 |
1911 | 5219 | 7.138736 | CCTAAAGAGAACATTTCGCAAAAAGA | 58.861 | 34.615 | 0.00 | 0.00 | 34.02 | 2.52 |
1912 | 5220 | 7.647715 | CCTAAAGAGAACATTTCGCAAAAAGAA | 59.352 | 33.333 | 0.00 | 0.00 | 34.02 | 2.52 |
1913 | 5221 | 7.455331 | AAAGAGAACATTTCGCAAAAAGAAG | 57.545 | 32.000 | 0.00 | 0.00 | 34.02 | 2.85 |
1914 | 5222 | 5.523369 | AGAGAACATTTCGCAAAAAGAAGG | 58.477 | 37.500 | 0.00 | 0.00 | 34.02 | 3.46 |
1915 | 5223 | 5.299279 | AGAGAACATTTCGCAAAAAGAAGGA | 59.701 | 36.000 | 0.00 | 0.00 | 34.02 | 3.36 |
1916 | 5224 | 5.901552 | AGAACATTTCGCAAAAAGAAGGAA | 58.098 | 33.333 | 0.00 | 0.00 | 34.02 | 3.36 |
1917 | 5225 | 5.979517 | AGAACATTTCGCAAAAAGAAGGAAG | 59.020 | 36.000 | 0.00 | 0.00 | 34.02 | 3.46 |
1918 | 5226 | 5.514274 | ACATTTCGCAAAAAGAAGGAAGA | 57.486 | 34.783 | 0.00 | 0.00 | 0.00 | 2.87 |
1919 | 5227 | 5.901552 | ACATTTCGCAAAAAGAAGGAAGAA | 58.098 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
1920 | 5228 | 6.337356 | ACATTTCGCAAAAAGAAGGAAGAAA | 58.663 | 32.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1921 | 5229 | 6.816140 | ACATTTCGCAAAAAGAAGGAAGAAAA | 59.184 | 30.769 | 0.00 | 0.00 | 31.47 | 2.29 |
1922 | 5230 | 7.333174 | ACATTTCGCAAAAAGAAGGAAGAAAAA | 59.667 | 29.630 | 0.00 | 0.00 | 31.47 | 1.94 |
1992 | 5300 | 7.112779 | CAGTTTCCTGGAGTTTATGGAATAGT | 58.887 | 38.462 | 0.00 | 0.00 | 38.24 | 2.12 |
1993 | 5301 | 7.066284 | CAGTTTCCTGGAGTTTATGGAATAGTG | 59.934 | 40.741 | 0.00 | 0.00 | 38.24 | 2.74 |
1994 | 5302 | 5.630415 | TCCTGGAGTTTATGGAATAGTGG | 57.370 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
1995 | 5303 | 5.285401 | TCCTGGAGTTTATGGAATAGTGGA | 58.715 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
1997 | 5305 | 5.823045 | CCTGGAGTTTATGGAATAGTGGAAC | 59.177 | 44.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2001 | 5309 | 6.002653 | AGTTTATGGAATAGTGGAACCTCC | 57.997 | 41.667 | 0.00 | 0.00 | 37.80 | 4.30 |
2034 | 5344 | 2.747446 | GACAGGTGTGTTTGACTTGTGT | 59.253 | 45.455 | 0.00 | 0.00 | 36.88 | 3.72 |
2035 | 5345 | 2.487762 | ACAGGTGTGTTTGACTTGTGTG | 59.512 | 45.455 | 0.00 | 0.00 | 30.30 | 3.82 |
2036 | 5346 | 1.472480 | AGGTGTGTTTGACTTGTGTGC | 59.528 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
2037 | 5347 | 1.472480 | GGTGTGTTTGACTTGTGTGCT | 59.528 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
2038 | 5348 | 2.477863 | GGTGTGTTTGACTTGTGTGCTC | 60.478 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2039 | 5349 | 2.420022 | GTGTGTTTGACTTGTGTGCTCT | 59.580 | 45.455 | 0.00 | 0.00 | 0.00 | 4.09 |
2040 | 5350 | 3.081061 | TGTGTTTGACTTGTGTGCTCTT | 58.919 | 40.909 | 0.00 | 0.00 | 0.00 | 2.85 |
2041 | 5351 | 3.126858 | TGTGTTTGACTTGTGTGCTCTTC | 59.873 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
2042 | 5352 | 2.351418 | TGTTTGACTTGTGTGCTCTTCG | 59.649 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
2043 | 5353 | 2.595124 | TTGACTTGTGTGCTCTTCGA | 57.405 | 45.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2044 | 5354 | 2.595124 | TGACTTGTGTGCTCTTCGAA | 57.405 | 45.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2045 | 5355 | 2.899976 | TGACTTGTGTGCTCTTCGAAA | 58.100 | 42.857 | 0.00 | 0.00 | 0.00 | 3.46 |
2046 | 5356 | 2.607635 | TGACTTGTGTGCTCTTCGAAAC | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 2.78 |
2047 | 5357 | 2.607635 | GACTTGTGTGCTCTTCGAAACA | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
2048 | 5358 | 2.609459 | ACTTGTGTGCTCTTCGAAACAG | 59.391 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
2049 | 5359 | 1.581934 | TGTGTGCTCTTCGAAACAGG | 58.418 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2050 | 5360 | 1.134521 | TGTGTGCTCTTCGAAACAGGT | 60.135 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
2051 | 5361 | 1.940613 | GTGTGCTCTTCGAAACAGGTT | 59.059 | 47.619 | 0.00 | 0.00 | 0.00 | 3.50 |
2052 | 5362 | 2.354821 | GTGTGCTCTTCGAAACAGGTTT | 59.645 | 45.455 | 0.00 | 0.00 | 35.14 | 3.27 |
2053 | 5363 | 3.013921 | TGTGCTCTTCGAAACAGGTTTT | 58.986 | 40.909 | 0.00 | 0.00 | 32.11 | 2.43 |
2054 | 5364 | 3.064820 | TGTGCTCTTCGAAACAGGTTTTC | 59.935 | 43.478 | 0.00 | 0.00 | 32.11 | 2.29 |
2059 | 5369 | 3.345087 | CGAAACAGGTTTTCGCTCG | 57.655 | 52.632 | 6.24 | 0.00 | 43.52 | 5.03 |
2060 | 5370 | 0.110823 | CGAAACAGGTTTTCGCTCGG | 60.111 | 55.000 | 6.24 | 0.00 | 43.52 | 4.63 |
2061 | 5371 | 0.942252 | GAAACAGGTTTTCGCTCGGT | 59.058 | 50.000 | 0.00 | 0.00 | 32.11 | 4.69 |
2062 | 5372 | 0.661020 | AAACAGGTTTTCGCTCGGTG | 59.339 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2063 | 5373 | 1.782028 | AACAGGTTTTCGCTCGGTGC | 61.782 | 55.000 | 0.00 | 0.00 | 38.57 | 5.01 |
2072 | 5382 | 4.072088 | GCTCGGTGCGGACGTTTG | 62.072 | 66.667 | 0.00 | 0.00 | 0.00 | 2.93 |
2073 | 5383 | 3.411351 | CTCGGTGCGGACGTTTGG | 61.411 | 66.667 | 0.00 | 0.00 | 0.00 | 3.28 |
2074 | 5384 | 4.224274 | TCGGTGCGGACGTTTGGT | 62.224 | 61.111 | 0.00 | 0.00 | 0.00 | 3.67 |
2075 | 5385 | 3.273834 | CGGTGCGGACGTTTGGTT | 61.274 | 61.111 | 0.00 | 0.00 | 0.00 | 3.67 |
2076 | 5386 | 2.635338 | GGTGCGGACGTTTGGTTC | 59.365 | 61.111 | 0.00 | 0.00 | 0.00 | 3.62 |
2077 | 5387 | 2.635338 | GTGCGGACGTTTGGTTCC | 59.365 | 61.111 | 0.00 | 0.00 | 0.00 | 3.62 |
2078 | 5388 | 1.890510 | GTGCGGACGTTTGGTTCCT | 60.891 | 57.895 | 0.00 | 0.00 | 0.00 | 3.36 |
2079 | 5389 | 1.890041 | TGCGGACGTTTGGTTCCTG | 60.890 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
2080 | 5390 | 2.613506 | GCGGACGTTTGGTTCCTGG | 61.614 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
2081 | 5391 | 1.964373 | CGGACGTTTGGTTCCTGGG | 60.964 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
2082 | 5392 | 1.149854 | GGACGTTTGGTTCCTGGGT | 59.850 | 57.895 | 0.00 | 0.00 | 0.00 | 4.51 |
2083 | 5393 | 1.170290 | GGACGTTTGGTTCCTGGGTG | 61.170 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2084 | 5394 | 0.464916 | GACGTTTGGTTCCTGGGTGT | 60.465 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2085 | 5395 | 0.838608 | ACGTTTGGTTCCTGGGTGTA | 59.161 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2086 | 5396 | 1.422402 | ACGTTTGGTTCCTGGGTGTAT | 59.578 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
2087 | 5397 | 2.638855 | ACGTTTGGTTCCTGGGTGTATA | 59.361 | 45.455 | 0.00 | 0.00 | 0.00 | 1.47 |
2088 | 5398 | 3.264964 | ACGTTTGGTTCCTGGGTGTATAT | 59.735 | 43.478 | 0.00 | 0.00 | 0.00 | 0.86 |
2089 | 5399 | 4.470664 | ACGTTTGGTTCCTGGGTGTATATA | 59.529 | 41.667 | 0.00 | 0.00 | 0.00 | 0.86 |
2090 | 5400 | 4.812626 | CGTTTGGTTCCTGGGTGTATATAC | 59.187 | 45.833 | 5.89 | 5.89 | 0.00 | 1.47 |
2091 | 5401 | 5.627272 | CGTTTGGTTCCTGGGTGTATATACA | 60.627 | 44.000 | 11.62 | 11.62 | 0.00 | 2.29 |
2104 | 5414 | 5.373222 | GTGTATATACACCCAGCAATTGGA | 58.627 | 41.667 | 28.48 | 0.00 | 46.85 | 3.53 |
2105 | 5415 | 5.825679 | GTGTATATACACCCAGCAATTGGAA | 59.174 | 40.000 | 28.48 | 0.00 | 46.85 | 3.53 |
2106 | 5416 | 6.320164 | GTGTATATACACCCAGCAATTGGAAA | 59.680 | 38.462 | 28.48 | 0.00 | 46.85 | 3.13 |
2107 | 5417 | 7.147983 | GTGTATATACACCCAGCAATTGGAAAA | 60.148 | 37.037 | 28.48 | 0.00 | 46.85 | 2.29 |
2182 | 5492 | 9.814899 | TCTGAAATAAATTTGACTCTTTTTGCA | 57.185 | 25.926 | 0.00 | 0.00 | 0.00 | 4.08 |
2183 | 5493 | 9.853921 | CTGAAATAAATTTGACTCTTTTTGCAC | 57.146 | 29.630 | 0.00 | 0.00 | 0.00 | 4.57 |
2184 | 5494 | 9.598517 | TGAAATAAATTTGACTCTTTTTGCACT | 57.401 | 25.926 | 0.00 | 0.00 | 0.00 | 4.40 |
2190 | 5500 | 9.683069 | AAATTTGACTCTTTTTGCACTAGTATG | 57.317 | 29.630 | 0.00 | 0.00 | 0.00 | 2.39 |
2191 | 5501 | 7.801716 | TTTGACTCTTTTTGCACTAGTATGT | 57.198 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2192 | 5502 | 8.896320 | TTTGACTCTTTTTGCACTAGTATGTA | 57.104 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
2193 | 5503 | 8.896320 | TTGACTCTTTTTGCACTAGTATGTAA | 57.104 | 30.769 | 0.00 | 0.00 | 0.00 | 2.41 |
2194 | 5504 | 9.502091 | TTGACTCTTTTTGCACTAGTATGTAAT | 57.498 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
2195 | 5505 | 9.502091 | TGACTCTTTTTGCACTAGTATGTAATT | 57.498 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
2201 | 5511 | 8.442605 | TTTTGCACTAGTATGTAATTTTTCGC | 57.557 | 30.769 | 0.00 | 0.00 | 0.00 | 4.70 |
2202 | 5512 | 6.114221 | TGCACTAGTATGTAATTTTTCGCC | 57.886 | 37.500 | 0.00 | 0.00 | 0.00 | 5.54 |
2203 | 5513 | 5.644206 | TGCACTAGTATGTAATTTTTCGCCA | 59.356 | 36.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2204 | 5514 | 6.149640 | TGCACTAGTATGTAATTTTTCGCCAA | 59.850 | 34.615 | 0.00 | 0.00 | 0.00 | 4.52 |
2205 | 5515 | 7.148154 | TGCACTAGTATGTAATTTTTCGCCAAT | 60.148 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2206 | 5516 | 8.339714 | GCACTAGTATGTAATTTTTCGCCAATA | 58.660 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
2212 | 5522 | 9.961266 | GTATGTAATTTTTCGCCAATAAAAACC | 57.039 | 29.630 | 0.00 | 0.00 | 38.30 | 3.27 |
2213 | 5523 | 7.422878 | TGTAATTTTTCGCCAATAAAAACCC | 57.577 | 32.000 | 0.00 | 0.00 | 38.30 | 4.11 |
2214 | 5524 | 6.990349 | TGTAATTTTTCGCCAATAAAAACCCA | 59.010 | 30.769 | 0.00 | 0.00 | 38.30 | 4.51 |
2215 | 5525 | 6.552859 | AATTTTTCGCCAATAAAAACCCAG | 57.447 | 33.333 | 0.00 | 0.00 | 38.30 | 4.45 |
2216 | 5526 | 2.734276 | TTCGCCAATAAAAACCCAGC | 57.266 | 45.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2217 | 5527 | 1.621992 | TCGCCAATAAAAACCCAGCA | 58.378 | 45.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2218 | 5528 | 2.175202 | TCGCCAATAAAAACCCAGCAT | 58.825 | 42.857 | 0.00 | 0.00 | 0.00 | 3.79 |
2219 | 5529 | 2.564947 | TCGCCAATAAAAACCCAGCATT | 59.435 | 40.909 | 0.00 | 0.00 | 0.00 | 3.56 |
2220 | 5530 | 2.672381 | CGCCAATAAAAACCCAGCATTG | 59.328 | 45.455 | 0.00 | 0.00 | 0.00 | 2.82 |
2221 | 5531 | 3.616076 | CGCCAATAAAAACCCAGCATTGA | 60.616 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2222 | 5532 | 3.684305 | GCCAATAAAAACCCAGCATTGAC | 59.316 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
2223 | 5533 | 4.563374 | GCCAATAAAAACCCAGCATTGACT | 60.563 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
2224 | 5534 | 5.550290 | CCAATAAAAACCCAGCATTGACTT | 58.450 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
2225 | 5535 | 5.997129 | CCAATAAAAACCCAGCATTGACTTT | 59.003 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2226 | 5536 | 6.147656 | CCAATAAAAACCCAGCATTGACTTTC | 59.852 | 38.462 | 0.00 | 0.00 | 0.00 | 2.62 |
2227 | 5537 | 3.369546 | AAAACCCAGCATTGACTTTCG | 57.630 | 42.857 | 0.00 | 0.00 | 0.00 | 3.46 |
2228 | 5538 | 2.270352 | AACCCAGCATTGACTTTCGA | 57.730 | 45.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2229 | 5539 | 1.813513 | ACCCAGCATTGACTTTCGAG | 58.186 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
2230 | 5540 | 1.089920 | CCCAGCATTGACTTTCGAGG | 58.910 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2231 | 5541 | 1.339055 | CCCAGCATTGACTTTCGAGGA | 60.339 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
2232 | 5542 | 2.426522 | CCAGCATTGACTTTCGAGGAA | 58.573 | 47.619 | 0.00 | 0.00 | 0.00 | 3.36 |
2233 | 5543 | 2.813754 | CCAGCATTGACTTTCGAGGAAA | 59.186 | 45.455 | 0.00 | 0.00 | 0.00 | 3.13 |
2234 | 5544 | 3.253188 | CCAGCATTGACTTTCGAGGAAAA | 59.747 | 43.478 | 0.00 | 0.00 | 30.84 | 2.29 |
2235 | 5545 | 4.261572 | CCAGCATTGACTTTCGAGGAAAAA | 60.262 | 41.667 | 0.00 | 0.00 | 30.84 | 1.94 |
2265 | 5575 | 9.529325 | TTGCTATATACAAGACACTATTCACAC | 57.471 | 33.333 | 0.00 | 0.00 | 0.00 | 3.82 |
2266 | 5576 | 8.914011 | TGCTATATACAAGACACTATTCACACT | 58.086 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
2273 | 5583 | 8.902540 | ACAAGACACTATTCACACTATTTTGA | 57.097 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
2274 | 5584 | 8.774586 | ACAAGACACTATTCACACTATTTTGAC | 58.225 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2275 | 5585 | 7.907214 | AGACACTATTCACACTATTTTGACC | 57.093 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2276 | 5586 | 7.450074 | AGACACTATTCACACTATTTTGACCA | 58.550 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
2277 | 5587 | 7.936847 | AGACACTATTCACACTATTTTGACCAA | 59.063 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
2278 | 5588 | 8.458573 | ACACTATTCACACTATTTTGACCAAA | 57.541 | 30.769 | 0.00 | 0.00 | 0.00 | 3.28 |
2279 | 5589 | 9.077885 | ACACTATTCACACTATTTTGACCAAAT | 57.922 | 29.630 | 0.00 | 0.00 | 38.69 | 2.32 |
2280 | 5590 | 9.912634 | CACTATTCACACTATTTTGACCAAATT | 57.087 | 29.630 | 0.00 | 0.00 | 36.43 | 1.82 |
2285 | 5595 | 9.442047 | TTCACACTATTTTGACCAAATTTTTGT | 57.558 | 25.926 | 2.63 | 0.00 | 36.43 | 2.83 |
2286 | 5596 | 9.442047 | TCACACTATTTTGACCAAATTTTTGTT | 57.558 | 25.926 | 2.63 | 0.00 | 36.43 | 2.83 |
2304 | 5614 | 3.690487 | TTTTTCGCCCTGAAGTCGA | 57.310 | 47.368 | 0.00 | 0.00 | 37.99 | 4.20 |
2305 | 5615 | 1.956297 | TTTTTCGCCCTGAAGTCGAA | 58.044 | 45.000 | 0.00 | 0.00 | 39.97 | 3.71 |
2306 | 5616 | 1.508632 | TTTTCGCCCTGAAGTCGAAG | 58.491 | 50.000 | 0.00 | 0.00 | 42.14 | 3.79 |
2307 | 5617 | 0.949105 | TTTCGCCCTGAAGTCGAAGC | 60.949 | 55.000 | 0.00 | 0.00 | 42.14 | 3.86 |
2308 | 5618 | 1.816863 | TTCGCCCTGAAGTCGAAGCT | 61.817 | 55.000 | 0.00 | 0.00 | 37.31 | 3.74 |
2309 | 5619 | 2.097038 | CGCCCTGAAGTCGAAGCTG | 61.097 | 63.158 | 0.00 | 0.00 | 0.00 | 4.24 |
2310 | 5620 | 1.743252 | GCCCTGAAGTCGAAGCTGG | 60.743 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
2311 | 5621 | 1.078848 | CCCTGAAGTCGAAGCTGGG | 60.079 | 63.158 | 9.82 | 9.82 | 34.99 | 4.45 |
2312 | 5622 | 1.674057 | CCTGAAGTCGAAGCTGGGT | 59.326 | 57.895 | 0.00 | 0.00 | 0.00 | 4.51 |
2313 | 5623 | 0.035458 | CCTGAAGTCGAAGCTGGGTT | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
2314 | 5624 | 1.543429 | CCTGAAGTCGAAGCTGGGTTT | 60.543 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
2315 | 5625 | 2.222027 | CTGAAGTCGAAGCTGGGTTTT | 58.778 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
2316 | 5626 | 2.618709 | CTGAAGTCGAAGCTGGGTTTTT | 59.381 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
2317 | 5627 | 2.357637 | TGAAGTCGAAGCTGGGTTTTTG | 59.642 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
2318 | 5628 | 2.052782 | AGTCGAAGCTGGGTTTTTGT | 57.947 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2319 | 5629 | 2.375146 | AGTCGAAGCTGGGTTTTTGTT | 58.625 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
2320 | 5630 | 2.099098 | AGTCGAAGCTGGGTTTTTGTTG | 59.901 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
2321 | 5631 | 2.098443 | GTCGAAGCTGGGTTTTTGTTGA | 59.902 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2322 | 5632 | 2.098443 | TCGAAGCTGGGTTTTTGTTGAC | 59.902 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2323 | 5633 | 2.459934 | GAAGCTGGGTTTTTGTTGACG | 58.540 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
2324 | 5634 | 0.744281 | AGCTGGGTTTTTGTTGACGG | 59.256 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2325 | 5635 | 0.741915 | GCTGGGTTTTTGTTGACGGA | 59.258 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2326 | 5636 | 1.135333 | GCTGGGTTTTTGTTGACGGAA | 59.865 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
2327 | 5637 | 2.798145 | GCTGGGTTTTTGTTGACGGAAG | 60.798 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2328 | 5638 | 2.685897 | CTGGGTTTTTGTTGACGGAAGA | 59.314 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
2329 | 5639 | 3.292460 | TGGGTTTTTGTTGACGGAAGAT | 58.708 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
2330 | 5640 | 3.702045 | TGGGTTTTTGTTGACGGAAGATT | 59.298 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
2331 | 5641 | 4.888239 | TGGGTTTTTGTTGACGGAAGATTA | 59.112 | 37.500 | 0.00 | 0.00 | 0.00 | 1.75 |
2332 | 5642 | 5.536916 | TGGGTTTTTGTTGACGGAAGATTAT | 59.463 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2333 | 5643 | 6.715718 | TGGGTTTTTGTTGACGGAAGATTATA | 59.284 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
2334 | 5644 | 7.394923 | TGGGTTTTTGTTGACGGAAGATTATAT | 59.605 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2335 | 5645 | 8.895737 | GGGTTTTTGTTGACGGAAGATTATATA | 58.104 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2336 | 5646 | 9.712359 | GGTTTTTGTTGACGGAAGATTATATAC | 57.288 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
2341 | 5651 | 9.961265 | TTGTTGACGGAAGATTATATACTAGTG | 57.039 | 33.333 | 5.39 | 0.00 | 0.00 | 2.74 |
2342 | 5652 | 8.080417 | TGTTGACGGAAGATTATATACTAGTGC | 58.920 | 37.037 | 5.39 | 0.00 | 0.00 | 4.40 |
2343 | 5653 | 7.754851 | TGACGGAAGATTATATACTAGTGCA | 57.245 | 36.000 | 5.39 | 0.00 | 0.00 | 4.57 |
2344 | 5654 | 7.817641 | TGACGGAAGATTATATACTAGTGCAG | 58.182 | 38.462 | 5.39 | 0.00 | 0.00 | 4.41 |
2345 | 5655 | 7.664318 | TGACGGAAGATTATATACTAGTGCAGA | 59.336 | 37.037 | 5.39 | 0.00 | 0.00 | 4.26 |
2346 | 5656 | 8.405418 | ACGGAAGATTATATACTAGTGCAGAA | 57.595 | 34.615 | 5.39 | 0.00 | 0.00 | 3.02 |
2347 | 5657 | 8.516234 | ACGGAAGATTATATACTAGTGCAGAAG | 58.484 | 37.037 | 5.39 | 0.00 | 0.00 | 2.85 |
2348 | 5658 | 8.731605 | CGGAAGATTATATACTAGTGCAGAAGA | 58.268 | 37.037 | 5.39 | 0.00 | 0.00 | 2.87 |
2357 | 5667 | 5.283457 | ACTAGTGCAGAAGAAAGTCAAGT | 57.717 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2358 | 5668 | 5.675538 | ACTAGTGCAGAAGAAAGTCAAGTT | 58.324 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
2359 | 5669 | 6.116126 | ACTAGTGCAGAAGAAAGTCAAGTTT | 58.884 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2360 | 5670 | 7.272978 | ACTAGTGCAGAAGAAAGTCAAGTTTA | 58.727 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
2361 | 5671 | 7.934120 | ACTAGTGCAGAAGAAAGTCAAGTTTAT | 59.066 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2362 | 5672 | 7.573968 | AGTGCAGAAGAAAGTCAAGTTTATT | 57.426 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2363 | 5673 | 7.643579 | AGTGCAGAAGAAAGTCAAGTTTATTC | 58.356 | 34.615 | 8.83 | 8.83 | 37.73 | 1.75 |
2364 | 5674 | 7.283127 | AGTGCAGAAGAAAGTCAAGTTTATTCA | 59.717 | 33.333 | 16.00 | 0.00 | 39.20 | 2.57 |
2365 | 5675 | 7.915397 | GTGCAGAAGAAAGTCAAGTTTATTCAA | 59.085 | 33.333 | 16.00 | 3.49 | 39.20 | 2.69 |
2366 | 5676 | 8.465999 | TGCAGAAGAAAGTCAAGTTTATTCAAA | 58.534 | 29.630 | 16.00 | 3.23 | 39.20 | 2.69 |
2367 | 5677 | 9.301153 | GCAGAAGAAAGTCAAGTTTATTCAAAA | 57.699 | 29.630 | 16.00 | 0.00 | 39.20 | 2.44 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
148 | 180 | 2.126149 | CTGCAGCGAGACGAGCTT | 60.126 | 61.111 | 0.00 | 0.00 | 44.06 | 3.74 |
215 | 256 | 0.251916 | CCAATAGGTCGGCCAGAACA | 59.748 | 55.000 | 9.71 | 2.42 | 39.61 | 3.18 |
770 | 816 | 0.670162 | AGTACAACCACACGCTACGT | 59.330 | 50.000 | 0.00 | 0.00 | 42.36 | 3.57 |
858 | 904 | 0.823769 | TCTGAGGAGATATGCGGCGT | 60.824 | 55.000 | 9.37 | 0.00 | 0.00 | 5.68 |
868 | 914 | 1.066858 | GCGGTTTGTGATCTGAGGAGA | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
926 | 4134 | 8.408043 | TGATGGAAGCAAGAAAGAATAAAAGA | 57.592 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
1024 | 4271 | 0.754587 | GTATTCTCCCCCGTCGTCCT | 60.755 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1053 | 4300 | 4.688419 | ACGTACGACCACGCCGTG | 62.688 | 66.667 | 24.41 | 10.95 | 45.77 | 4.94 |
1408 | 4682 | 6.456988 | CCGCGTTTGCTTTCTTTCTATTCTAT | 60.457 | 38.462 | 4.92 | 0.00 | 39.65 | 1.98 |
1409 | 4683 | 5.163893 | CCGCGTTTGCTTTCTTTCTATTCTA | 60.164 | 40.000 | 4.92 | 0.00 | 39.65 | 2.10 |
1410 | 4684 | 4.378459 | CCGCGTTTGCTTTCTTTCTATTCT | 60.378 | 41.667 | 4.92 | 0.00 | 39.65 | 2.40 |
1411 | 4685 | 3.846335 | CCGCGTTTGCTTTCTTTCTATTC | 59.154 | 43.478 | 4.92 | 0.00 | 39.65 | 1.75 |
1413 | 4687 | 2.161609 | CCCGCGTTTGCTTTCTTTCTAT | 59.838 | 45.455 | 4.92 | 0.00 | 39.65 | 1.98 |
1414 | 4688 | 1.533731 | CCCGCGTTTGCTTTCTTTCTA | 59.466 | 47.619 | 4.92 | 0.00 | 39.65 | 2.10 |
1415 | 4689 | 0.310854 | CCCGCGTTTGCTTTCTTTCT | 59.689 | 50.000 | 4.92 | 0.00 | 39.65 | 2.52 |
1416 | 4690 | 0.309612 | TCCCGCGTTTGCTTTCTTTC | 59.690 | 50.000 | 4.92 | 0.00 | 39.65 | 2.62 |
1420 | 4694 | 2.126850 | GCTCCCGCGTTTGCTTTC | 60.127 | 61.111 | 4.92 | 0.00 | 39.65 | 2.62 |
1431 | 4706 | 2.672996 | CCAACAAGTGGGCTCCCG | 60.673 | 66.667 | 0.00 | 0.00 | 44.64 | 5.14 |
1454 | 4729 | 4.914291 | CGTCCCAAAGTTCAACGC | 57.086 | 55.556 | 0.00 | 0.00 | 0.00 | 4.84 |
1481 | 4762 | 7.823310 | CCTCATTCTCATTCCTATTATCAGTGG | 59.177 | 40.741 | 0.00 | 0.00 | 0.00 | 4.00 |
1517 | 4801 | 4.883083 | TCGGCACATTACCTAATCTCATC | 58.117 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
1518 | 4802 | 4.800914 | GCTCGGCACATTACCTAATCTCAT | 60.801 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
1519 | 4803 | 3.492656 | GCTCGGCACATTACCTAATCTCA | 60.493 | 47.826 | 0.00 | 0.00 | 0.00 | 3.27 |
1549 | 4848 | 4.085357 | TGCAGTTAACACCACTGAATCT | 57.915 | 40.909 | 8.61 | 0.00 | 43.90 | 2.40 |
1561 | 4860 | 4.479619 | CAGCTTCTCCAAATGCAGTTAAC | 58.520 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
1570 | 4871 | 0.613012 | GGCACCCAGCTTCTCCAAAT | 60.613 | 55.000 | 0.00 | 0.00 | 44.79 | 2.32 |
1586 | 4887 | 1.890876 | ATCTTTGCGTGTTAGTGGCA | 58.109 | 45.000 | 0.00 | 0.00 | 34.35 | 4.92 |
1613 | 4914 | 2.489971 | TCTGTACAAAAGAGCCAACCG | 58.510 | 47.619 | 0.00 | 0.00 | 0.00 | 4.44 |
1661 | 4969 | 2.808244 | ACGTGTGTTTTTGAATGGCAG | 58.192 | 42.857 | 0.00 | 0.00 | 0.00 | 4.85 |
1665 | 4973 | 2.283884 | GGGCAACGTGTGTTTTTGAATG | 59.716 | 45.455 | 0.00 | 0.00 | 35.72 | 2.67 |
1679 | 4987 | 0.176680 | ACAGAGATAGCAGGGCAACG | 59.823 | 55.000 | 0.00 | 0.00 | 37.60 | 4.10 |
1686 | 4994 | 5.524281 | TCTTGTACGTAGACAGAGATAGCAG | 59.476 | 44.000 | 0.00 | 0.00 | 0.00 | 4.24 |
1702 | 5010 | 6.444633 | TCTCTTCCACTTTTACTCTTGTACG | 58.555 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1703 | 5011 | 9.924650 | TTATCTCTTCCACTTTTACTCTTGTAC | 57.075 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
1704 | 5012 | 9.924650 | GTTATCTCTTCCACTTTTACTCTTGTA | 57.075 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
1705 | 5013 | 7.599245 | CGTTATCTCTTCCACTTTTACTCTTGT | 59.401 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
1706 | 5014 | 7.063544 | CCGTTATCTCTTCCACTTTTACTCTTG | 59.936 | 40.741 | 0.00 | 0.00 | 0.00 | 3.02 |
1707 | 5015 | 7.039223 | TCCGTTATCTCTTCCACTTTTACTCTT | 60.039 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
1708 | 5016 | 6.436532 | TCCGTTATCTCTTCCACTTTTACTCT | 59.563 | 38.462 | 0.00 | 0.00 | 0.00 | 3.24 |
1709 | 5017 | 6.530887 | GTCCGTTATCTCTTCCACTTTTACTC | 59.469 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
1710 | 5018 | 6.396450 | GTCCGTTATCTCTTCCACTTTTACT | 58.604 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1711 | 5019 | 5.579904 | GGTCCGTTATCTCTTCCACTTTTAC | 59.420 | 44.000 | 0.00 | 0.00 | 0.00 | 2.01 |
1712 | 5020 | 5.246656 | TGGTCCGTTATCTCTTCCACTTTTA | 59.753 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
1713 | 5021 | 4.041198 | TGGTCCGTTATCTCTTCCACTTTT | 59.959 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
1714 | 5022 | 3.581332 | TGGTCCGTTATCTCTTCCACTTT | 59.419 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
1715 | 5023 | 3.056035 | GTGGTCCGTTATCTCTTCCACTT | 60.056 | 47.826 | 0.00 | 0.00 | 40.14 | 3.16 |
1716 | 5024 | 2.496470 | GTGGTCCGTTATCTCTTCCACT | 59.504 | 50.000 | 0.00 | 0.00 | 40.14 | 4.00 |
1717 | 5025 | 2.232941 | TGTGGTCCGTTATCTCTTCCAC | 59.767 | 50.000 | 0.00 | 0.00 | 42.56 | 4.02 |
1718 | 5026 | 2.531771 | TGTGGTCCGTTATCTCTTCCA | 58.468 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
1746 | 5054 | 4.375272 | CTCTAGCATACACATTGGACTGG | 58.625 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
1761 | 5069 | 3.020274 | CCAAGTCTGTCTAGCTCTAGCA | 58.980 | 50.000 | 4.54 | 1.25 | 45.16 | 3.49 |
1762 | 5070 | 2.223711 | GCCAAGTCTGTCTAGCTCTAGC | 60.224 | 54.545 | 0.00 | 0.00 | 42.49 | 3.42 |
1766 | 5074 | 2.977772 | ATGCCAAGTCTGTCTAGCTC | 57.022 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
1767 | 5075 | 3.070734 | CCATATGCCAAGTCTGTCTAGCT | 59.929 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
1768 | 5076 | 3.181461 | ACCATATGCCAAGTCTGTCTAGC | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 3.42 |
1769 | 5077 | 4.679373 | ACCATATGCCAAGTCTGTCTAG | 57.321 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
1770 | 5078 | 4.769688 | CAACCATATGCCAAGTCTGTCTA | 58.230 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
1792 | 5100 | 3.024547 | GAGGGAAATGGGTTAAGAAGGC | 58.975 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1796 | 5104 | 2.093128 | GCGAGAGGGAAATGGGTTAAGA | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
1797 | 5105 | 2.289565 | GCGAGAGGGAAATGGGTTAAG | 58.710 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
1798 | 5106 | 1.631388 | TGCGAGAGGGAAATGGGTTAA | 59.369 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
1799 | 5107 | 1.281419 | TGCGAGAGGGAAATGGGTTA | 58.719 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1800 | 5108 | 0.404040 | TTGCGAGAGGGAAATGGGTT | 59.596 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
1801 | 5109 | 0.625849 | ATTGCGAGAGGGAAATGGGT | 59.374 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
1802 | 5110 | 1.027357 | CATTGCGAGAGGGAAATGGG | 58.973 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1803 | 5111 | 2.042686 | TCATTGCGAGAGGGAAATGG | 57.957 | 50.000 | 0.00 | 0.00 | 32.17 | 3.16 |
1804 | 5112 | 2.551459 | GGATCATTGCGAGAGGGAAATG | 59.449 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
1805 | 5113 | 2.808202 | CGGATCATTGCGAGAGGGAAAT | 60.808 | 50.000 | 0.00 | 0.00 | 39.29 | 2.17 |
1806 | 5114 | 1.473257 | CGGATCATTGCGAGAGGGAAA | 60.473 | 52.381 | 0.00 | 0.00 | 39.29 | 3.13 |
1807 | 5115 | 0.104855 | CGGATCATTGCGAGAGGGAA | 59.895 | 55.000 | 0.00 | 0.00 | 39.29 | 3.97 |
1808 | 5116 | 0.755327 | TCGGATCATTGCGAGAGGGA | 60.755 | 55.000 | 0.00 | 0.00 | 41.04 | 4.20 |
1809 | 5117 | 0.598680 | GTCGGATCATTGCGAGAGGG | 60.599 | 60.000 | 0.00 | 0.00 | 46.79 | 4.30 |
1810 | 5118 | 0.598680 | GGTCGGATCATTGCGAGAGG | 60.599 | 60.000 | 0.00 | 0.00 | 46.79 | 3.69 |
1811 | 5119 | 0.103026 | TGGTCGGATCATTGCGAGAG | 59.897 | 55.000 | 0.00 | 0.00 | 46.79 | 3.20 |
1812 | 5120 | 0.752658 | ATGGTCGGATCATTGCGAGA | 59.247 | 50.000 | 0.00 | 0.00 | 46.79 | 4.04 |
1817 | 5125 | 3.282021 | AGTTTGGATGGTCGGATCATTG | 58.718 | 45.455 | 5.03 | 0.00 | 0.00 | 2.82 |
1826 | 5134 | 1.474077 | GTGCATGGAGTTTGGATGGTC | 59.526 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
1828 | 5136 | 1.203052 | GTGTGCATGGAGTTTGGATGG | 59.797 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
1840 | 5148 | 2.355756 | CCGATTCTTAAGGGTGTGCATG | 59.644 | 50.000 | 1.85 | 0.00 | 0.00 | 4.06 |
1844 | 5152 | 2.290071 | ACCACCGATTCTTAAGGGTGTG | 60.290 | 50.000 | 20.55 | 15.87 | 46.64 | 3.82 |
1853 | 5161 | 6.436532 | TCTCTAGTTCTTAACCACCGATTCTT | 59.563 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
1858 | 5166 | 4.015084 | CCTCTCTAGTTCTTAACCACCGA | 58.985 | 47.826 | 0.00 | 0.00 | 0.00 | 4.69 |
1884 | 5192 | 3.343617 | TGCGAAATGTTCTCTTTAGGGG | 58.656 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
1893 | 5201 | 5.514274 | TCCTTCTTTTTGCGAAATGTTCT | 57.486 | 34.783 | 11.07 | 0.00 | 0.00 | 3.01 |
1894 | 5202 | 5.977129 | TCTTCCTTCTTTTTGCGAAATGTTC | 59.023 | 36.000 | 11.07 | 0.00 | 0.00 | 3.18 |
1895 | 5203 | 5.901552 | TCTTCCTTCTTTTTGCGAAATGTT | 58.098 | 33.333 | 11.07 | 0.00 | 0.00 | 2.71 |
1896 | 5204 | 5.514274 | TCTTCCTTCTTTTTGCGAAATGT | 57.486 | 34.783 | 11.07 | 0.00 | 0.00 | 2.71 |
1897 | 5205 | 6.826893 | TTTCTTCCTTCTTTTTGCGAAATG | 57.173 | 33.333 | 0.00 | 2.89 | 0.00 | 2.32 |
1898 | 5206 | 7.841915 | TTTTTCTTCCTTCTTTTTGCGAAAT | 57.158 | 28.000 | 0.00 | 0.00 | 0.00 | 2.17 |
1922 | 5230 | 7.344612 | ACCATCCTTTGTTCTCTTTAGGTTTTT | 59.655 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
1923 | 5231 | 6.839134 | ACCATCCTTTGTTCTCTTTAGGTTTT | 59.161 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
1924 | 5232 | 6.373759 | ACCATCCTTTGTTCTCTTTAGGTTT | 58.626 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1925 | 5233 | 5.953571 | ACCATCCTTTGTTCTCTTTAGGTT | 58.046 | 37.500 | 0.00 | 0.00 | 0.00 | 3.50 |
1926 | 5234 | 5.584551 | ACCATCCTTTGTTCTCTTTAGGT | 57.415 | 39.130 | 0.00 | 0.00 | 0.00 | 3.08 |
1969 | 5277 | 6.318900 | CCACTATTCCATAAACTCCAGGAAAC | 59.681 | 42.308 | 0.00 | 0.00 | 42.83 | 2.78 |
1972 | 5280 | 5.285401 | TCCACTATTCCATAAACTCCAGGA | 58.715 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1979 | 5287 | 5.131067 | GGGAGGTTCCACTATTCCATAAAC | 58.869 | 45.833 | 0.00 | 0.00 | 38.64 | 2.01 |
1989 | 5297 | 0.113776 | AGACACGGGAGGTTCCACTA | 59.886 | 55.000 | 0.00 | 0.00 | 38.64 | 2.74 |
1992 | 5300 | 0.761323 | TGAAGACACGGGAGGTTCCA | 60.761 | 55.000 | 0.00 | 0.00 | 38.64 | 3.53 |
1993 | 5301 | 0.320508 | GTGAAGACACGGGAGGTTCC | 60.321 | 60.000 | 0.00 | 0.00 | 37.28 | 3.62 |
1994 | 5302 | 3.212450 | GTGAAGACACGGGAGGTTC | 57.788 | 57.895 | 0.00 | 0.00 | 37.28 | 3.62 |
2013 | 5323 | 2.747446 | ACACAAGTCAAACACACCTGTC | 59.253 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
2015 | 5325 | 2.731968 | GCACACAAGTCAAACACACCTG | 60.732 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2034 | 5344 | 3.963383 | GAAAACCTGTTTCGAAGAGCA | 57.037 | 42.857 | 0.00 | 0.00 | 38.43 | 4.26 |
2042 | 5352 | 0.942252 | ACCGAGCGAAAACCTGTTTC | 59.058 | 50.000 | 0.00 | 0.00 | 31.45 | 2.78 |
2043 | 5353 | 0.661020 | CACCGAGCGAAAACCTGTTT | 59.339 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2044 | 5354 | 1.782028 | GCACCGAGCGAAAACCTGTT | 61.782 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2045 | 5355 | 2.251642 | GCACCGAGCGAAAACCTGT | 61.252 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
2046 | 5356 | 2.556287 | GCACCGAGCGAAAACCTG | 59.444 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
2055 | 5365 | 4.072088 | CAAACGTCCGCACCGAGC | 62.072 | 66.667 | 0.00 | 0.00 | 40.87 | 5.03 |
2056 | 5366 | 3.411351 | CCAAACGTCCGCACCGAG | 61.411 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
2057 | 5367 | 3.736732 | AACCAAACGTCCGCACCGA | 62.737 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
2058 | 5368 | 3.231324 | GAACCAAACGTCCGCACCG | 62.231 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
2059 | 5369 | 2.635338 | GAACCAAACGTCCGCACC | 59.365 | 61.111 | 0.00 | 0.00 | 0.00 | 5.01 |
2060 | 5370 | 1.890510 | AGGAACCAAACGTCCGCAC | 60.891 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
2061 | 5371 | 1.890041 | CAGGAACCAAACGTCCGCA | 60.890 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
2062 | 5372 | 2.613506 | CCAGGAACCAAACGTCCGC | 61.614 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
2063 | 5373 | 1.964373 | CCCAGGAACCAAACGTCCG | 60.964 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
2064 | 5374 | 1.149854 | ACCCAGGAACCAAACGTCC | 59.850 | 57.895 | 0.00 | 0.00 | 0.00 | 4.79 |
2065 | 5375 | 0.464916 | ACACCCAGGAACCAAACGTC | 60.465 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
2066 | 5376 | 0.838608 | TACACCCAGGAACCAAACGT | 59.161 | 50.000 | 0.00 | 0.00 | 0.00 | 3.99 |
2067 | 5377 | 2.194201 | ATACACCCAGGAACCAAACG | 57.806 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
2068 | 5378 | 5.747342 | TGTATATACACCCAGGAACCAAAC | 58.253 | 41.667 | 11.62 | 0.00 | 0.00 | 2.93 |
2082 | 5392 | 5.638530 | TCCAATTGCTGGGTGTATATACA | 57.361 | 39.130 | 11.62 | 11.62 | 46.44 | 2.29 |
2083 | 5393 | 6.952773 | TTTCCAATTGCTGGGTGTATATAC | 57.047 | 37.500 | 5.89 | 5.89 | 46.44 | 1.47 |
2084 | 5394 | 7.962995 | TTTTTCCAATTGCTGGGTGTATATA | 57.037 | 32.000 | 0.00 | 0.00 | 46.44 | 0.86 |
2085 | 5395 | 6.865834 | TTTTTCCAATTGCTGGGTGTATAT | 57.134 | 33.333 | 0.00 | 0.00 | 46.44 | 0.86 |
2156 | 5466 | 9.814899 | TGCAAAAAGAGTCAAATTTATTTCAGA | 57.185 | 25.926 | 0.00 | 0.00 | 0.00 | 3.27 |
2157 | 5467 | 9.853921 | GTGCAAAAAGAGTCAAATTTATTTCAG | 57.146 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
2158 | 5468 | 9.598517 | AGTGCAAAAAGAGTCAAATTTATTTCA | 57.401 | 25.926 | 0.00 | 0.00 | 0.00 | 2.69 |
2164 | 5474 | 9.683069 | CATACTAGTGCAAAAAGAGTCAAATTT | 57.317 | 29.630 | 5.39 | 0.00 | 0.00 | 1.82 |
2165 | 5475 | 8.850156 | ACATACTAGTGCAAAAAGAGTCAAATT | 58.150 | 29.630 | 5.39 | 0.00 | 0.00 | 1.82 |
2166 | 5476 | 8.396272 | ACATACTAGTGCAAAAAGAGTCAAAT | 57.604 | 30.769 | 5.39 | 0.00 | 0.00 | 2.32 |
2167 | 5477 | 7.801716 | ACATACTAGTGCAAAAAGAGTCAAA | 57.198 | 32.000 | 5.39 | 0.00 | 0.00 | 2.69 |
2168 | 5478 | 8.896320 | TTACATACTAGTGCAAAAAGAGTCAA | 57.104 | 30.769 | 5.39 | 0.00 | 0.00 | 3.18 |
2169 | 5479 | 9.502091 | AATTACATACTAGTGCAAAAAGAGTCA | 57.498 | 29.630 | 5.39 | 0.00 | 0.00 | 3.41 |
2175 | 5485 | 8.907685 | GCGAAAAATTACATACTAGTGCAAAAA | 58.092 | 29.630 | 5.39 | 0.00 | 0.00 | 1.94 |
2176 | 5486 | 7.539366 | GGCGAAAAATTACATACTAGTGCAAAA | 59.461 | 33.333 | 5.39 | 0.00 | 0.00 | 2.44 |
2177 | 5487 | 7.024768 | GGCGAAAAATTACATACTAGTGCAAA | 58.975 | 34.615 | 5.39 | 0.00 | 0.00 | 3.68 |
2178 | 5488 | 6.149640 | TGGCGAAAAATTACATACTAGTGCAA | 59.850 | 34.615 | 5.39 | 0.00 | 0.00 | 4.08 |
2179 | 5489 | 5.644206 | TGGCGAAAAATTACATACTAGTGCA | 59.356 | 36.000 | 5.39 | 0.00 | 0.00 | 4.57 |
2180 | 5490 | 6.114221 | TGGCGAAAAATTACATACTAGTGC | 57.886 | 37.500 | 5.39 | 0.00 | 0.00 | 4.40 |
2186 | 5496 | 9.961266 | GGTTTTTATTGGCGAAAAATTACATAC | 57.039 | 29.630 | 7.48 | 0.00 | 37.89 | 2.39 |
2187 | 5497 | 9.152595 | GGGTTTTTATTGGCGAAAAATTACATA | 57.847 | 29.630 | 7.48 | 0.00 | 37.89 | 2.29 |
2188 | 5498 | 7.661847 | TGGGTTTTTATTGGCGAAAAATTACAT | 59.338 | 29.630 | 7.48 | 0.00 | 37.89 | 2.29 |
2189 | 5499 | 6.990349 | TGGGTTTTTATTGGCGAAAAATTACA | 59.010 | 30.769 | 7.48 | 5.49 | 37.89 | 2.41 |
2190 | 5500 | 7.422878 | TGGGTTTTTATTGGCGAAAAATTAC | 57.577 | 32.000 | 7.48 | 3.69 | 37.89 | 1.89 |
2191 | 5501 | 6.147985 | GCTGGGTTTTTATTGGCGAAAAATTA | 59.852 | 34.615 | 7.48 | 0.00 | 37.89 | 1.40 |
2192 | 5502 | 5.049060 | GCTGGGTTTTTATTGGCGAAAAATT | 60.049 | 36.000 | 7.48 | 0.00 | 37.89 | 1.82 |
2193 | 5503 | 4.454161 | GCTGGGTTTTTATTGGCGAAAAAT | 59.546 | 37.500 | 7.48 | 0.00 | 37.89 | 1.82 |
2194 | 5504 | 3.810386 | GCTGGGTTTTTATTGGCGAAAAA | 59.190 | 39.130 | 0.00 | 1.72 | 34.28 | 1.94 |
2195 | 5505 | 3.181465 | TGCTGGGTTTTTATTGGCGAAAA | 60.181 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
2196 | 5506 | 2.365617 | TGCTGGGTTTTTATTGGCGAAA | 59.634 | 40.909 | 0.00 | 0.00 | 0.00 | 3.46 |
2197 | 5507 | 1.964223 | TGCTGGGTTTTTATTGGCGAA | 59.036 | 42.857 | 0.00 | 0.00 | 0.00 | 4.70 |
2198 | 5508 | 1.621992 | TGCTGGGTTTTTATTGGCGA | 58.378 | 45.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2199 | 5509 | 2.671130 | ATGCTGGGTTTTTATTGGCG | 57.329 | 45.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2200 | 5510 | 3.684305 | GTCAATGCTGGGTTTTTATTGGC | 59.316 | 43.478 | 0.00 | 0.00 | 31.47 | 4.52 |
2201 | 5511 | 5.151297 | AGTCAATGCTGGGTTTTTATTGG | 57.849 | 39.130 | 0.00 | 0.00 | 31.47 | 3.16 |
2202 | 5512 | 6.128849 | CGAAAGTCAATGCTGGGTTTTTATTG | 60.129 | 38.462 | 0.00 | 0.00 | 0.00 | 1.90 |
2203 | 5513 | 5.925969 | CGAAAGTCAATGCTGGGTTTTTATT | 59.074 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2204 | 5514 | 5.242838 | TCGAAAGTCAATGCTGGGTTTTTAT | 59.757 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2205 | 5515 | 4.580995 | TCGAAAGTCAATGCTGGGTTTTTA | 59.419 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
2206 | 5516 | 3.383185 | TCGAAAGTCAATGCTGGGTTTTT | 59.617 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
2207 | 5517 | 2.955660 | TCGAAAGTCAATGCTGGGTTTT | 59.044 | 40.909 | 0.00 | 0.00 | 0.00 | 2.43 |
2208 | 5518 | 2.554032 | CTCGAAAGTCAATGCTGGGTTT | 59.446 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
2209 | 5519 | 2.154462 | CTCGAAAGTCAATGCTGGGTT | 58.846 | 47.619 | 0.00 | 0.00 | 0.00 | 4.11 |
2210 | 5520 | 1.611673 | CCTCGAAAGTCAATGCTGGGT | 60.612 | 52.381 | 0.00 | 0.00 | 0.00 | 4.51 |
2211 | 5521 | 1.089920 | CCTCGAAAGTCAATGCTGGG | 58.910 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
2212 | 5522 | 2.099141 | TCCTCGAAAGTCAATGCTGG | 57.901 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2213 | 5523 | 4.488126 | TTTTCCTCGAAAGTCAATGCTG | 57.512 | 40.909 | 0.00 | 0.00 | 32.93 | 4.41 |
2239 | 5549 | 9.529325 | GTGTGAATAGTGTCTTGTATATAGCAA | 57.471 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
2240 | 5550 | 8.914011 | AGTGTGAATAGTGTCTTGTATATAGCA | 58.086 | 33.333 | 0.00 | 0.00 | 0.00 | 3.49 |
2247 | 5557 | 9.990360 | TCAAAATAGTGTGAATAGTGTCTTGTA | 57.010 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
2248 | 5558 | 8.774586 | GTCAAAATAGTGTGAATAGTGTCTTGT | 58.225 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2249 | 5559 | 8.230486 | GGTCAAAATAGTGTGAATAGTGTCTTG | 58.770 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
2250 | 5560 | 7.936847 | TGGTCAAAATAGTGTGAATAGTGTCTT | 59.063 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
2251 | 5561 | 7.450074 | TGGTCAAAATAGTGTGAATAGTGTCT | 58.550 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
2252 | 5562 | 7.667043 | TGGTCAAAATAGTGTGAATAGTGTC | 57.333 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2253 | 5563 | 8.458573 | TTTGGTCAAAATAGTGTGAATAGTGT | 57.541 | 30.769 | 0.00 | 0.00 | 0.00 | 3.55 |
2254 | 5564 | 9.912634 | AATTTGGTCAAAATAGTGTGAATAGTG | 57.087 | 29.630 | 0.00 | 0.00 | 37.51 | 2.74 |
2259 | 5569 | 9.442047 | ACAAAAATTTGGTCAAAATAGTGTGAA | 57.558 | 25.926 | 10.38 | 0.00 | 42.34 | 3.18 |
2260 | 5570 | 9.442047 | AACAAAAATTTGGTCAAAATAGTGTGA | 57.558 | 25.926 | 10.38 | 0.00 | 42.34 | 3.58 |
2292 | 5602 | 1.743252 | CCAGCTTCGACTTCAGGGC | 60.743 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
2293 | 5603 | 1.078848 | CCCAGCTTCGACTTCAGGG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
2294 | 5604 | 0.035458 | AACCCAGCTTCGACTTCAGG | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2295 | 5605 | 1.884235 | AAACCCAGCTTCGACTTCAG | 58.116 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2296 | 5606 | 2.341846 | AAAACCCAGCTTCGACTTCA | 57.658 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2297 | 5607 | 2.357952 | ACAAAAACCCAGCTTCGACTTC | 59.642 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
2298 | 5608 | 2.375146 | ACAAAAACCCAGCTTCGACTT | 58.625 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
2299 | 5609 | 2.052782 | ACAAAAACCCAGCTTCGACT | 57.947 | 45.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2300 | 5610 | 2.098443 | TCAACAAAAACCCAGCTTCGAC | 59.902 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
2301 | 5611 | 2.098443 | GTCAACAAAAACCCAGCTTCGA | 59.902 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
2302 | 5612 | 2.459934 | GTCAACAAAAACCCAGCTTCG | 58.540 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
2303 | 5613 | 2.459934 | CGTCAACAAAAACCCAGCTTC | 58.540 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
2304 | 5614 | 1.136110 | CCGTCAACAAAAACCCAGCTT | 59.864 | 47.619 | 0.00 | 0.00 | 0.00 | 3.74 |
2305 | 5615 | 0.744281 | CCGTCAACAAAAACCCAGCT | 59.256 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2306 | 5616 | 0.741915 | TCCGTCAACAAAAACCCAGC | 59.258 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2307 | 5617 | 2.685897 | TCTTCCGTCAACAAAAACCCAG | 59.314 | 45.455 | 0.00 | 0.00 | 0.00 | 4.45 |
2308 | 5618 | 2.724454 | TCTTCCGTCAACAAAAACCCA | 58.276 | 42.857 | 0.00 | 0.00 | 0.00 | 4.51 |
2309 | 5619 | 4.316205 | AATCTTCCGTCAACAAAAACCC | 57.684 | 40.909 | 0.00 | 0.00 | 0.00 | 4.11 |
2310 | 5620 | 9.712359 | GTATATAATCTTCCGTCAACAAAAACC | 57.288 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2315 | 5625 | 9.961265 | CACTAGTATATAATCTTCCGTCAACAA | 57.039 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
2316 | 5626 | 8.080417 | GCACTAGTATATAATCTTCCGTCAACA | 58.920 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
2317 | 5627 | 8.080417 | TGCACTAGTATATAATCTTCCGTCAAC | 58.920 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
2318 | 5628 | 8.173542 | TGCACTAGTATATAATCTTCCGTCAA | 57.826 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2319 | 5629 | 7.664318 | TCTGCACTAGTATATAATCTTCCGTCA | 59.336 | 37.037 | 0.00 | 0.00 | 0.00 | 4.35 |
2320 | 5630 | 8.041829 | TCTGCACTAGTATATAATCTTCCGTC | 57.958 | 38.462 | 0.00 | 0.00 | 0.00 | 4.79 |
2321 | 5631 | 7.997773 | TCTGCACTAGTATATAATCTTCCGT | 57.002 | 36.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2322 | 5632 | 8.731605 | TCTTCTGCACTAGTATATAATCTTCCG | 58.268 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
2331 | 5641 | 8.754080 | ACTTGACTTTCTTCTGCACTAGTATAT | 58.246 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2332 | 5642 | 8.123639 | ACTTGACTTTCTTCTGCACTAGTATA | 57.876 | 34.615 | 0.00 | 0.00 | 0.00 | 1.47 |
2333 | 5643 | 6.998802 | ACTTGACTTTCTTCTGCACTAGTAT | 58.001 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
2334 | 5644 | 6.406692 | ACTTGACTTTCTTCTGCACTAGTA | 57.593 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
2335 | 5645 | 5.283457 | ACTTGACTTTCTTCTGCACTAGT | 57.717 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
2336 | 5646 | 6.610741 | AAACTTGACTTTCTTCTGCACTAG | 57.389 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
2337 | 5647 | 8.677148 | AATAAACTTGACTTTCTTCTGCACTA | 57.323 | 30.769 | 0.00 | 0.00 | 0.00 | 2.74 |
2338 | 5648 | 7.283127 | TGAATAAACTTGACTTTCTTCTGCACT | 59.717 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
2339 | 5649 | 7.417612 | TGAATAAACTTGACTTTCTTCTGCAC | 58.582 | 34.615 | 0.00 | 0.00 | 0.00 | 4.57 |
2340 | 5650 | 7.566760 | TGAATAAACTTGACTTTCTTCTGCA | 57.433 | 32.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2341 | 5651 | 8.856490 | TTTGAATAAACTTGACTTTCTTCTGC | 57.144 | 30.769 | 0.00 | 0.00 | 0.00 | 4.26 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.