Multiple sequence alignment - TraesCS5B01G503800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G503800 | chr5B | 100.000 | 3993 | 0 | 0 | 1 | 3993 | 670113084 | 670117076 | 0.000000e+00 | 7374.0 |
1 | TraesCS5B01G503800 | chr5B | 95.859 | 797 | 11 | 7 | 3 | 777 | 446584844 | 446585640 | 0.000000e+00 | 1269.0 |
2 | TraesCS5B01G503800 | chr5B | 96.724 | 641 | 20 | 1 | 1 | 640 | 17560309 | 17559669 | 0.000000e+00 | 1066.0 |
3 | TraesCS5B01G503800 | chr5B | 96.412 | 641 | 22 | 1 | 1 | 640 | 376338524 | 376339164 | 0.000000e+00 | 1055.0 |
4 | TraesCS5B01G503800 | chr5D | 85.998 | 1814 | 140 | 57 | 1667 | 3418 | 530870687 | 530872448 | 0.000000e+00 | 1838.0 |
5 | TraesCS5B01G503800 | chr5D | 86.465 | 761 | 74 | 17 | 777 | 1535 | 530869752 | 530870485 | 0.000000e+00 | 808.0 |
6 | TraesCS5B01G503800 | chr5D | 93.289 | 149 | 9 | 1 | 3804 | 3952 | 530872772 | 530872919 | 6.720000e-53 | 219.0 |
7 | TraesCS5B01G503800 | chr4A | 83.263 | 1422 | 153 | 39 | 2352 | 3731 | 641403609 | 641402231 | 0.000000e+00 | 1229.0 |
8 | TraesCS5B01G503800 | chr4A | 96.880 | 641 | 19 | 1 | 1 | 640 | 704152358 | 704152998 | 0.000000e+00 | 1072.0 |
9 | TraesCS5B01G503800 | chr4A | 90.777 | 618 | 33 | 11 | 773 | 1386 | 641405192 | 641404595 | 0.000000e+00 | 804.0 |
10 | TraesCS5B01G503800 | chr4A | 80.714 | 560 | 59 | 26 | 1649 | 2191 | 641404227 | 641403700 | 1.350000e-104 | 390.0 |
11 | TraesCS5B01G503800 | chr4A | 89.437 | 142 | 12 | 2 | 3495 | 3635 | 641398500 | 641398361 | 4.100000e-40 | 176.0 |
12 | TraesCS5B01G503800 | chr7B | 94.598 | 796 | 24 | 4 | 1 | 777 | 73327156 | 73326361 | 0.000000e+00 | 1214.0 |
13 | TraesCS5B01G503800 | chr7B | 93.392 | 802 | 32 | 10 | 1 | 782 | 713959040 | 713959840 | 0.000000e+00 | 1168.0 |
14 | TraesCS5B01G503800 | chr7B | 91.299 | 816 | 38 | 11 | 1 | 786 | 557438687 | 557437875 | 0.000000e+00 | 1083.0 |
15 | TraesCS5B01G503800 | chr1B | 92.707 | 809 | 30 | 4 | 1 | 780 | 629667643 | 629666835 | 0.000000e+00 | 1140.0 |
16 | TraesCS5B01G503800 | chr1B | 96.568 | 641 | 17 | 3 | 1 | 640 | 9729464 | 9728828 | 0.000000e+00 | 1057.0 |
17 | TraesCS5B01G503800 | chr2B | 92.203 | 808 | 33 | 8 | 1 | 779 | 794739867 | 794739061 | 0.000000e+00 | 1116.0 |
18 | TraesCS5B01G503800 | chr2B | 96.412 | 641 | 22 | 1 | 1 | 640 | 682846646 | 682846006 | 0.000000e+00 | 1055.0 |
19 | TraesCS5B01G503800 | chr2B | 92.000 | 50 | 4 | 0 | 3731 | 3780 | 679898348 | 679898299 | 1.990000e-08 | 71.3 |
20 | TraesCS5B01G503800 | chr2B | 90.385 | 52 | 5 | 0 | 3729 | 3780 | 633269575 | 633269626 | 7.160000e-08 | 69.4 |
21 | TraesCS5B01G503800 | chr3B | 96.724 | 641 | 20 | 1 | 1 | 640 | 768200291 | 768200931 | 0.000000e+00 | 1066.0 |
22 | TraesCS5B01G503800 | chr3B | 86.928 | 459 | 16 | 10 | 366 | 783 | 188231824 | 188231369 | 3.610000e-130 | 475.0 |
23 | TraesCS5B01G503800 | chr3B | 96.667 | 150 | 3 | 2 | 632 | 780 | 624233423 | 624233275 | 8.570000e-62 | 248.0 |
24 | TraesCS5B01G503800 | chr4B | 96.724 | 641 | 17 | 2 | 1 | 640 | 134897566 | 134898203 | 0.000000e+00 | 1064.0 |
25 | TraesCS5B01G503800 | chr4B | 84.742 | 485 | 26 | 12 | 328 | 779 | 1812697 | 1813166 | 3.660000e-120 | 442.0 |
26 | TraesCS5B01G503800 | chr3A | 97.931 | 145 | 3 | 0 | 635 | 779 | 669179684 | 669179828 | 6.620000e-63 | 252.0 |
27 | TraesCS5B01G503800 | chr4D | 97.778 | 45 | 1 | 0 | 3407 | 3451 | 93392347 | 93392391 | 1.190000e-10 | 78.7 |
28 | TraesCS5B01G503800 | chr5A | 95.652 | 46 | 2 | 0 | 3732 | 3777 | 402024595 | 402024640 | 1.540000e-09 | 75.0 |
29 | TraesCS5B01G503800 | chr2D | 92.000 | 50 | 4 | 0 | 3731 | 3780 | 566989100 | 566989051 | 1.990000e-08 | 71.3 |
30 | TraesCS5B01G503800 | chr2D | 88.462 | 52 | 5 | 1 | 3729 | 3780 | 533660179 | 533660229 | 1.200000e-05 | 62.1 |
31 | TraesCS5B01G503800 | chr2A | 92.000 | 50 | 4 | 0 | 3731 | 3780 | 706753003 | 706752954 | 1.990000e-08 | 71.3 |
32 | TraesCS5B01G503800 | chrUn | 90.385 | 52 | 5 | 0 | 3729 | 3780 | 26140683 | 26140734 | 7.160000e-08 | 69.4 |
33 | TraesCS5B01G503800 | chr6B | 92.000 | 50 | 2 | 2 | 3726 | 3774 | 555856394 | 555856442 | 7.160000e-08 | 69.4 |
34 | TraesCS5B01G503800 | chr3D | 90.000 | 50 | 5 | 0 | 3731 | 3780 | 524715628 | 524715677 | 9.260000e-07 | 65.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G503800 | chr5B | 670113084 | 670117076 | 3992 | False | 7374.00 | 7374 | 100.00000 | 1 | 3993 | 1 | chr5B.!!$F3 | 3992 |
1 | TraesCS5B01G503800 | chr5B | 446584844 | 446585640 | 796 | False | 1269.00 | 1269 | 95.85900 | 3 | 777 | 1 | chr5B.!!$F2 | 774 |
2 | TraesCS5B01G503800 | chr5B | 17559669 | 17560309 | 640 | True | 1066.00 | 1066 | 96.72400 | 1 | 640 | 1 | chr5B.!!$R1 | 639 |
3 | TraesCS5B01G503800 | chr5B | 376338524 | 376339164 | 640 | False | 1055.00 | 1055 | 96.41200 | 1 | 640 | 1 | chr5B.!!$F1 | 639 |
4 | TraesCS5B01G503800 | chr5D | 530869752 | 530872919 | 3167 | False | 955.00 | 1838 | 88.58400 | 777 | 3952 | 3 | chr5D.!!$F1 | 3175 |
5 | TraesCS5B01G503800 | chr4A | 704152358 | 704152998 | 640 | False | 1072.00 | 1072 | 96.88000 | 1 | 640 | 1 | chr4A.!!$F1 | 639 |
6 | TraesCS5B01G503800 | chr4A | 641398361 | 641405192 | 6831 | True | 649.75 | 1229 | 86.04775 | 773 | 3731 | 4 | chr4A.!!$R1 | 2958 |
7 | TraesCS5B01G503800 | chr7B | 73326361 | 73327156 | 795 | True | 1214.00 | 1214 | 94.59800 | 1 | 777 | 1 | chr7B.!!$R1 | 776 |
8 | TraesCS5B01G503800 | chr7B | 713959040 | 713959840 | 800 | False | 1168.00 | 1168 | 93.39200 | 1 | 782 | 1 | chr7B.!!$F1 | 781 |
9 | TraesCS5B01G503800 | chr7B | 557437875 | 557438687 | 812 | True | 1083.00 | 1083 | 91.29900 | 1 | 786 | 1 | chr7B.!!$R2 | 785 |
10 | TraesCS5B01G503800 | chr1B | 629666835 | 629667643 | 808 | True | 1140.00 | 1140 | 92.70700 | 1 | 780 | 1 | chr1B.!!$R2 | 779 |
11 | TraesCS5B01G503800 | chr1B | 9728828 | 9729464 | 636 | True | 1057.00 | 1057 | 96.56800 | 1 | 640 | 1 | chr1B.!!$R1 | 639 |
12 | TraesCS5B01G503800 | chr2B | 794739061 | 794739867 | 806 | True | 1116.00 | 1116 | 92.20300 | 1 | 779 | 1 | chr2B.!!$R3 | 778 |
13 | TraesCS5B01G503800 | chr2B | 682846006 | 682846646 | 640 | True | 1055.00 | 1055 | 96.41200 | 1 | 640 | 1 | chr2B.!!$R2 | 639 |
14 | TraesCS5B01G503800 | chr3B | 768200291 | 768200931 | 640 | False | 1066.00 | 1066 | 96.72400 | 1 | 640 | 1 | chr3B.!!$F1 | 639 |
15 | TraesCS5B01G503800 | chr4B | 134897566 | 134898203 | 637 | False | 1064.00 | 1064 | 96.72400 | 1 | 640 | 1 | chr4B.!!$F2 | 639 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
355 | 357 | 0.979665 | CAGGAGAAGGTGAAGGAGCA | 59.020 | 55.0 | 0.0 | 0.0 | 0.0 | 4.26 | F |
1238 | 1285 | 0.253044 | CTCCGGGAAGAAGATTGGCA | 59.747 | 55.0 | 0.0 | 0.0 | 0.0 | 4.92 | F |
1554 | 1715 | 0.391263 | GTGGACAGGAGCGGGTTAAG | 60.391 | 60.0 | 0.0 | 0.0 | 0.0 | 1.85 | F |
2482 | 2669 | 0.105778 | GCAGGGCAGTAGCTTCTAGG | 59.894 | 60.0 | 0.0 | 0.0 | 41.7 | 3.02 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1537 | 1698 | 0.323957 | AACTTAACCCGCTCCTGTCC | 59.676 | 55.0 | 0.0 | 0.0 | 0.00 | 4.02 | R |
2413 | 2599 | 0.173708 | AGGCTTCGACTCGGTGAATC | 59.826 | 55.0 | 0.0 | 0.0 | 0.00 | 2.52 | R |
2545 | 2735 | 0.379669 | GCAGAGCACGGATTTCCATG | 59.620 | 55.0 | 0.0 | 0.0 | 35.14 | 3.66 | R |
3965 | 4214 | 0.040067 | GATTCGATCATTTGCCCCGC | 60.040 | 55.0 | 0.0 | 0.0 | 0.00 | 6.13 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
37 | 38 | 1.007842 | GTCCTCCTCCTCCTCTTCCTT | 59.992 | 57.143 | 0.00 | 0.00 | 0.00 | 3.36 |
355 | 357 | 0.979665 | CAGGAGAAGGTGAAGGAGCA | 59.020 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
631 | 633 | 4.992688 | TGCCATGTTTAGCCGAAATTTAG | 58.007 | 39.130 | 0.00 | 0.00 | 0.00 | 1.85 |
633 | 635 | 4.359706 | CCATGTTTAGCCGAAATTTAGCC | 58.640 | 43.478 | 8.64 | 0.00 | 0.00 | 3.93 |
634 | 636 | 4.359706 | CATGTTTAGCCGAAATTTAGCCC | 58.640 | 43.478 | 8.64 | 0.00 | 0.00 | 5.19 |
635 | 637 | 3.692690 | TGTTTAGCCGAAATTTAGCCCT | 58.307 | 40.909 | 8.64 | 2.99 | 0.00 | 5.19 |
860 | 901 | 7.839680 | AGAAAAATGACCAAAGTATGAGGTT | 57.160 | 32.000 | 0.00 | 0.00 | 35.36 | 3.50 |
861 | 902 | 7.661040 | AGAAAAATGACCAAAGTATGAGGTTG | 58.339 | 34.615 | 0.00 | 0.00 | 35.36 | 3.77 |
878 | 919 | 4.070009 | AGGTTGTTTCTGTAATTCGGTCC | 58.930 | 43.478 | 0.00 | 0.00 | 0.00 | 4.46 |
879 | 920 | 3.816523 | GGTTGTTTCTGTAATTCGGTCCA | 59.183 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
880 | 921 | 4.083484 | GGTTGTTTCTGTAATTCGGTCCAG | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
881 | 922 | 3.071479 | TGTTTCTGTAATTCGGTCCAGC | 58.929 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
882 | 923 | 3.071479 | GTTTCTGTAATTCGGTCCAGCA | 58.929 | 45.455 | 0.00 | 0.00 | 0.00 | 4.41 |
883 | 924 | 2.672961 | TCTGTAATTCGGTCCAGCAG | 57.327 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
884 | 925 | 2.176045 | TCTGTAATTCGGTCCAGCAGA | 58.824 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
1140 | 1187 | 2.342279 | CTGGTCGTCCTCGCCAAA | 59.658 | 61.111 | 0.00 | 0.00 | 40.49 | 3.28 |
1227 | 1274 | 2.042162 | AGTACTAGTGAACCTCCGGGAA | 59.958 | 50.000 | 5.39 | 0.00 | 36.25 | 3.97 |
1238 | 1285 | 0.253044 | CTCCGGGAAGAAGATTGGCA | 59.747 | 55.000 | 0.00 | 0.00 | 0.00 | 4.92 |
1242 | 1289 | 1.408683 | CGGGAAGAAGATTGGCATCCA | 60.409 | 52.381 | 3.67 | 0.00 | 0.00 | 3.41 |
1243 | 1290 | 2.305009 | GGGAAGAAGATTGGCATCCAG | 58.695 | 52.381 | 3.67 | 0.00 | 33.81 | 3.86 |
1246 | 1293 | 4.446889 | GGGAAGAAGATTGGCATCCAGTAT | 60.447 | 45.833 | 3.67 | 0.00 | 33.81 | 2.12 |
1250 | 1297 | 6.705863 | AGAAGATTGGCATCCAGTATTTTC | 57.294 | 37.500 | 0.00 | 0.00 | 33.81 | 2.29 |
1278 | 1326 | 0.523968 | CTTCCAATGCGCGGTCAATG | 60.524 | 55.000 | 8.83 | 1.01 | 0.00 | 2.82 |
1284 | 1332 | 2.202298 | GCGCGGTCAATGGTTTCG | 60.202 | 61.111 | 8.83 | 0.00 | 0.00 | 3.46 |
1321 | 1369 | 5.364778 | CGTTCTCTCTCTCTCTCTATGGAA | 58.635 | 45.833 | 0.00 | 0.00 | 0.00 | 3.53 |
1324 | 1372 | 7.307989 | CGTTCTCTCTCTCTCTCTATGGAATTC | 60.308 | 44.444 | 0.00 | 0.00 | 0.00 | 2.17 |
1382 | 1430 | 1.235724 | GTCCTTAGTTTGTTGCGGCT | 58.764 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
1391 | 1439 | 1.153353 | TTGTTGCGGCTGTAGCTTAC | 58.847 | 50.000 | 0.00 | 0.00 | 41.70 | 2.34 |
1394 | 1442 | 1.737793 | GTTGCGGCTGTAGCTTACATT | 59.262 | 47.619 | 0.00 | 0.00 | 41.70 | 2.71 |
1395 | 1443 | 2.107950 | TGCGGCTGTAGCTTACATTT | 57.892 | 45.000 | 0.00 | 0.00 | 41.70 | 2.32 |
1396 | 1444 | 1.737236 | TGCGGCTGTAGCTTACATTTG | 59.263 | 47.619 | 0.00 | 0.00 | 41.70 | 2.32 |
1402 | 1450 | 4.399303 | GGCTGTAGCTTACATTTGGATGTT | 59.601 | 41.667 | 3.63 | 0.00 | 42.72 | 2.71 |
1403 | 1451 | 5.449177 | GGCTGTAGCTTACATTTGGATGTTC | 60.449 | 44.000 | 3.63 | 0.00 | 42.72 | 3.18 |
1407 | 1466 | 6.597672 | TGTAGCTTACATTTGGATGTTCGAAT | 59.402 | 34.615 | 0.00 | 0.00 | 43.92 | 3.34 |
1409 | 1468 | 4.500477 | GCTTACATTTGGATGTTCGAATGC | 59.500 | 41.667 | 0.00 | 0.00 | 43.92 | 3.56 |
1412 | 1471 | 4.269183 | ACATTTGGATGTTCGAATGCCTA | 58.731 | 39.130 | 0.00 | 0.00 | 43.92 | 3.93 |
1416 | 1475 | 3.270027 | TGGATGTTCGAATGCCTACAAG | 58.730 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
1417 | 1476 | 2.032178 | GGATGTTCGAATGCCTACAAGC | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
1422 | 1481 | 1.550524 | TCGAATGCCTACAAGCTGTCT | 59.449 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1424 | 1483 | 2.012673 | GAATGCCTACAAGCTGTCTGG | 58.987 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
1431 | 1490 | 2.281761 | AAGCTGTCTGGTTGGGCG | 60.282 | 61.111 | 0.00 | 0.00 | 34.77 | 6.13 |
1448 | 1515 | 1.905922 | GCGCTTGAGCTCCTGTTGAC | 61.906 | 60.000 | 12.15 | 0.00 | 39.32 | 3.18 |
1452 | 1519 | 0.880278 | TTGAGCTCCTGTTGACGCAC | 60.880 | 55.000 | 12.15 | 0.00 | 0.00 | 5.34 |
1461 | 1544 | 4.680237 | TTGACGCACTGCCTCCCG | 62.680 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
1463 | 1546 | 3.755628 | GACGCACTGCCTCCCGTA | 61.756 | 66.667 | 0.00 | 0.00 | 33.63 | 4.02 |
1476 | 1559 | 4.223477 | TGCCTCCCGTAGTTAGTTTTACAT | 59.777 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
1478 | 1561 | 5.750547 | GCCTCCCGTAGTTAGTTTTACATAC | 59.249 | 44.000 | 0.00 | 0.00 | 0.00 | 2.39 |
1526 | 1609 | 1.072965 | GATACAGGCAGAATCAGGGGG | 59.927 | 57.143 | 0.00 | 0.00 | 0.00 | 5.40 |
1531 | 1614 | 2.054453 | GCAGAATCAGGGGGTTGCC | 61.054 | 63.158 | 0.00 | 0.00 | 0.00 | 4.52 |
1537 | 1698 | 2.519119 | ATCAGGGGGTTGCCATGGTG | 62.519 | 60.000 | 14.67 | 0.54 | 0.00 | 4.17 |
1540 | 1701 | 2.679996 | GGGGTTGCCATGGTGGAC | 60.680 | 66.667 | 14.67 | 9.47 | 40.96 | 4.02 |
1541 | 1702 | 2.117206 | GGGTTGCCATGGTGGACA | 59.883 | 61.111 | 14.67 | 0.00 | 40.96 | 4.02 |
1542 | 1703 | 1.978617 | GGGTTGCCATGGTGGACAG | 60.979 | 63.158 | 14.67 | 0.00 | 40.96 | 3.51 |
1546 | 1707 | 2.439156 | GCCATGGTGGACAGGAGC | 60.439 | 66.667 | 14.67 | 0.00 | 40.96 | 4.70 |
1547 | 1708 | 2.124983 | CCATGGTGGACAGGAGCG | 60.125 | 66.667 | 2.57 | 0.00 | 40.96 | 5.03 |
1554 | 1715 | 0.391263 | GTGGACAGGAGCGGGTTAAG | 60.391 | 60.000 | 0.00 | 0.00 | 0.00 | 1.85 |
1561 | 1722 | 5.211174 | ACAGGAGCGGGTTAAGTTATATC | 57.789 | 43.478 | 0.00 | 0.00 | 0.00 | 1.63 |
1562 | 1723 | 4.900054 | ACAGGAGCGGGTTAAGTTATATCT | 59.100 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
1563 | 1724 | 5.365895 | ACAGGAGCGGGTTAAGTTATATCTT | 59.634 | 40.000 | 1.81 | 1.81 | 0.00 | 2.40 |
1564 | 1725 | 6.552350 | ACAGGAGCGGGTTAAGTTATATCTTA | 59.448 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
1565 | 1726 | 6.867293 | CAGGAGCGGGTTAAGTTATATCTTAC | 59.133 | 42.308 | 3.24 | 0.79 | 30.87 | 2.34 |
1566 | 1727 | 6.552350 | AGGAGCGGGTTAAGTTATATCTTACA | 59.448 | 38.462 | 3.24 | 0.00 | 30.87 | 2.41 |
1567 | 1728 | 7.234988 | AGGAGCGGGTTAAGTTATATCTTACAT | 59.765 | 37.037 | 3.24 | 0.00 | 30.87 | 2.29 |
1568 | 1729 | 7.876582 | GGAGCGGGTTAAGTTATATCTTACATT | 59.123 | 37.037 | 3.24 | 0.00 | 30.87 | 2.71 |
1569 | 1730 | 8.828688 | AGCGGGTTAAGTTATATCTTACATTC | 57.171 | 34.615 | 3.24 | 0.00 | 30.87 | 2.67 |
1578 | 1739 | 9.905713 | AAGTTATATCTTACATTCTTGCAGGAA | 57.094 | 29.630 | 14.17 | 14.17 | 0.00 | 3.36 |
1595 | 1757 | 1.133790 | GGAAATGCAAGCTAGGCACAG | 59.866 | 52.381 | 14.45 | 0.00 | 45.23 | 3.66 |
1599 | 1761 | 1.238439 | TGCAAGCTAGGCACAGAAAC | 58.762 | 50.000 | 8.77 | 0.00 | 36.11 | 2.78 |
1608 | 1770 | 1.750778 | AGGCACAGAAACCAAGTGTTG | 59.249 | 47.619 | 0.00 | 0.00 | 37.23 | 3.33 |
1609 | 1771 | 1.476488 | GGCACAGAAACCAAGTGTTGT | 59.524 | 47.619 | 0.00 | 0.00 | 37.23 | 3.32 |
1611 | 1773 | 3.243068 | GGCACAGAAACCAAGTGTTGTAG | 60.243 | 47.826 | 0.00 | 0.00 | 37.23 | 2.74 |
1615 | 1779 | 6.027749 | CACAGAAACCAAGTGTTGTAGAAAC | 58.972 | 40.000 | 0.00 | 0.00 | 37.23 | 2.78 |
1628 | 1792 | 4.582701 | TGTAGAAACACAAAAGGGCATG | 57.417 | 40.909 | 0.00 | 0.00 | 0.00 | 4.06 |
1629 | 1793 | 2.531522 | AGAAACACAAAAGGGCATGC | 57.468 | 45.000 | 9.90 | 9.90 | 0.00 | 4.06 |
1630 | 1794 | 1.761784 | AGAAACACAAAAGGGCATGCA | 59.238 | 42.857 | 21.36 | 0.00 | 0.00 | 3.96 |
1631 | 1795 | 1.866601 | GAAACACAAAAGGGCATGCAC | 59.133 | 47.619 | 21.36 | 17.78 | 0.00 | 4.57 |
1632 | 1796 | 1.122227 | AACACAAAAGGGCATGCACT | 58.878 | 45.000 | 19.14 | 19.14 | 0.00 | 4.40 |
1633 | 1797 | 1.122227 | ACACAAAAGGGCATGCACTT | 58.878 | 45.000 | 29.51 | 29.51 | 42.18 | 3.16 |
1634 | 1798 | 1.202557 | ACACAAAAGGGCATGCACTTG | 60.203 | 47.619 | 34.75 | 25.97 | 38.98 | 3.16 |
1635 | 1799 | 1.068895 | CACAAAAGGGCATGCACTTGA | 59.931 | 47.619 | 34.75 | 0.00 | 38.98 | 3.02 |
1636 | 1800 | 1.761784 | ACAAAAGGGCATGCACTTGAA | 59.238 | 42.857 | 34.75 | 0.00 | 38.98 | 2.69 |
1640 | 1804 | 4.888326 | AAAGGGCATGCACTTGAATTTA | 57.112 | 36.364 | 34.75 | 0.00 | 38.98 | 1.40 |
1641 | 1805 | 4.460948 | AAGGGCATGCACTTGAATTTAG | 57.539 | 40.909 | 33.73 | 0.00 | 38.40 | 1.85 |
1642 | 1806 | 2.762327 | AGGGCATGCACTTGAATTTAGG | 59.238 | 45.455 | 19.14 | 0.00 | 0.00 | 2.69 |
1643 | 1807 | 2.760092 | GGGCATGCACTTGAATTTAGGA | 59.240 | 45.455 | 21.36 | 0.00 | 0.00 | 2.94 |
1644 | 1808 | 3.385755 | GGGCATGCACTTGAATTTAGGAT | 59.614 | 43.478 | 21.36 | 0.00 | 0.00 | 3.24 |
1645 | 1809 | 4.584325 | GGGCATGCACTTGAATTTAGGATA | 59.416 | 41.667 | 21.36 | 0.00 | 0.00 | 2.59 |
1649 | 1813 | 7.416664 | GGCATGCACTTGAATTTAGGATAGAAA | 60.417 | 37.037 | 21.36 | 0.00 | 0.00 | 2.52 |
1651 | 1815 | 7.391148 | TGCACTTGAATTTAGGATAGAAACC | 57.609 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1653 | 1817 | 7.450014 | TGCACTTGAATTTAGGATAGAAACCAA | 59.550 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
1654 | 1818 | 7.970614 | GCACTTGAATTTAGGATAGAAACCAAG | 59.029 | 37.037 | 0.00 | 0.00 | 36.67 | 3.61 |
1655 | 1819 | 9.231297 | CACTTGAATTTAGGATAGAAACCAAGA | 57.769 | 33.333 | 0.00 | 0.00 | 35.51 | 3.02 |
1656 | 1820 | 9.232473 | ACTTGAATTTAGGATAGAAACCAAGAC | 57.768 | 33.333 | 0.00 | 0.00 | 35.51 | 3.01 |
1657 | 1821 | 9.231297 | CTTGAATTTAGGATAGAAACCAAGACA | 57.769 | 33.333 | 0.00 | 0.00 | 34.75 | 3.41 |
1663 | 1827 | 8.754991 | TTAGGATAGAAACCAAGACAAAAACA | 57.245 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
1665 | 1829 | 6.833933 | AGGATAGAAACCAAGACAAAAACAGT | 59.166 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
1670 | 1834 | 6.868339 | AGAAACCAAGACAAAAACAGTTTCAG | 59.132 | 34.615 | 13.34 | 0.00 | 42.40 | 3.02 |
1687 | 1851 | 1.021390 | CAGAGGGTGACGAATGGTGC | 61.021 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
1688 | 1852 | 1.194781 | AGAGGGTGACGAATGGTGCT | 61.195 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1693 | 1857 | 1.665679 | GGTGACGAATGGTGCTATGTG | 59.334 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
1694 | 1858 | 1.062587 | GTGACGAATGGTGCTATGTGC | 59.937 | 52.381 | 0.00 | 0.00 | 43.25 | 4.57 |
1737 | 1901 | 2.743664 | GTTTTTGCCAATGGAATCAGGC | 59.256 | 45.455 | 2.05 | 0.00 | 44.80 | 4.85 |
1741 | 1905 | 1.197812 | GCCAATGGAATCAGGCCTTT | 58.802 | 50.000 | 0.00 | 0.00 | 40.39 | 3.11 |
1742 | 1906 | 1.134610 | GCCAATGGAATCAGGCCTTTG | 60.135 | 52.381 | 0.00 | 2.79 | 40.39 | 2.77 |
1743 | 1907 | 2.181975 | CCAATGGAATCAGGCCTTTGT | 58.818 | 47.619 | 0.00 | 0.00 | 38.31 | 2.83 |
1750 | 1916 | 3.367703 | GGAATCAGGCCTTTGTGTCATTG | 60.368 | 47.826 | 0.00 | 0.00 | 0.00 | 2.82 |
1751 | 1917 | 2.363306 | TCAGGCCTTTGTGTCATTGT | 57.637 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1756 | 1922 | 4.699735 | CAGGCCTTTGTGTCATTGTACATA | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
1757 | 1923 | 5.182950 | CAGGCCTTTGTGTCATTGTACATAA | 59.817 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
1782 | 1948 | 3.118454 | CAGGTTAGCGGCACCACG | 61.118 | 66.667 | 11.55 | 0.00 | 36.67 | 4.94 |
1977 | 2143 | 7.696992 | TCCATACCTTTTTGTTTCATACTCC | 57.303 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1978 | 2144 | 6.373216 | TCCATACCTTTTTGTTTCATACTCCG | 59.627 | 38.462 | 0.00 | 0.00 | 0.00 | 4.63 |
2009 | 2175 | 8.150827 | AGCTAATATGGTCCTAGAATAATGCA | 57.849 | 34.615 | 0.00 | 0.00 | 0.00 | 3.96 |
2010 | 2176 | 8.043710 | AGCTAATATGGTCCTAGAATAATGCAC | 58.956 | 37.037 | 0.00 | 0.00 | 0.00 | 4.57 |
2042 | 2208 | 5.352284 | ACTAGTTTTGTGATCCTATGCTCG | 58.648 | 41.667 | 0.00 | 0.00 | 0.00 | 5.03 |
2058 | 2238 | 2.034179 | TGCTCGCTTGCGTATACAGTAT | 59.966 | 45.455 | 14.70 | 0.00 | 35.36 | 2.12 |
2100 | 2284 | 5.296748 | GCAGCACCTTTGGAAAAGAAATTA | 58.703 | 37.500 | 1.31 | 0.00 | 0.00 | 1.40 |
2109 | 2293 | 9.599866 | CCTTTGGAAAAGAAATTAGTTTCAGTT | 57.400 | 29.630 | 12.61 | 6.14 | 44.92 | 3.16 |
2114 | 2298 | 9.894783 | GGAAAAGAAATTAGTTTCAGTTAGGAC | 57.105 | 33.333 | 12.61 | 1.64 | 44.92 | 3.85 |
2119 | 2303 | 7.719633 | AGAAATTAGTTTCAGTTAGGACTTGCA | 59.280 | 33.333 | 12.61 | 0.00 | 44.92 | 4.08 |
2132 | 2316 | 1.265365 | GACTTGCAGTCAAACTGGCTC | 59.735 | 52.381 | 9.01 | 0.00 | 46.01 | 4.70 |
2229 | 2414 | 5.959583 | AAATTGACCAAACCCAGGTTTAA | 57.040 | 34.783 | 14.27 | 6.15 | 45.32 | 1.52 |
2232 | 2417 | 4.946478 | TGACCAAACCCAGGTTTAATTG | 57.054 | 40.909 | 14.27 | 3.48 | 45.32 | 2.32 |
2236 | 2421 | 4.202172 | ACCAAACCCAGGTTTAATTGAACG | 60.202 | 41.667 | 14.27 | 0.45 | 45.32 | 3.95 |
2238 | 2423 | 5.452077 | CCAAACCCAGGTTTAATTGAACGAA | 60.452 | 40.000 | 14.27 | 0.00 | 45.32 | 3.85 |
2239 | 2424 | 6.220201 | CAAACCCAGGTTTAATTGAACGAAT | 58.780 | 36.000 | 14.27 | 0.00 | 45.32 | 3.34 |
2259 | 2444 | 6.070767 | ACGAATAGAGATTTTGAGAGGTGGAA | 60.071 | 38.462 | 0.00 | 0.00 | 0.00 | 3.53 |
2263 | 2448 | 5.885465 | AGAGATTTTGAGAGGTGGAACAAT | 58.115 | 37.500 | 0.00 | 0.00 | 44.16 | 2.71 |
2269 | 2454 | 4.365514 | TGAGAGGTGGAACAATAAAGCA | 57.634 | 40.909 | 0.00 | 0.00 | 44.16 | 3.91 |
2273 | 2458 | 3.826729 | GAGGTGGAACAATAAAGCACCTT | 59.173 | 43.478 | 0.00 | 0.00 | 44.16 | 3.50 |
2274 | 2459 | 4.223144 | AGGTGGAACAATAAAGCACCTTT | 58.777 | 39.130 | 0.00 | 0.00 | 44.16 | 3.11 |
2302 | 2487 | 9.561069 | TCTCTGTTTCCCTATTTATATTTGAGC | 57.439 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
2337 | 2522 | 7.766738 | TCATAGTTCATAAATAGACGTTTGCCA | 59.233 | 33.333 | 0.00 | 0.00 | 0.00 | 4.92 |
2339 | 2524 | 9.772973 | ATAGTTCATAAATAGACGTTTGCCATA | 57.227 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
2344 | 2529 | 8.147704 | TCATAAATAGACGTTTGCCATAGATGA | 58.852 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
2345 | 2530 | 8.939929 | CATAAATAGACGTTTGCCATAGATGAT | 58.060 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
2356 | 2541 | 7.591421 | TTGCCATAGATGATTCATGATTGTT | 57.409 | 32.000 | 3.32 | 0.00 | 0.00 | 2.83 |
2391 | 2576 | 6.473131 | GCATTGCGATATTTTTCAGTCAATCA | 59.527 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2394 | 2579 | 8.984891 | TTGCGATATTTTTCAGTCAATCAAAT | 57.015 | 26.923 | 0.00 | 0.00 | 0.00 | 2.32 |
2395 | 2580 | 8.397215 | TGCGATATTTTTCAGTCAATCAAATG | 57.603 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
2396 | 2581 | 8.242739 | TGCGATATTTTTCAGTCAATCAAATGA | 58.757 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2421 | 2607 | 7.985476 | ACCATTATTAGTTCTTTGATTCACCG | 58.015 | 34.615 | 0.00 | 0.00 | 0.00 | 4.94 |
2482 | 2669 | 0.105778 | GCAGGGCAGTAGCTTCTAGG | 59.894 | 60.000 | 0.00 | 0.00 | 41.70 | 3.02 |
2493 | 2680 | 6.487331 | GCAGTAGCTTCTAGGTAGACTATTGA | 59.513 | 42.308 | 0.00 | 0.00 | 37.91 | 2.57 |
2541 | 2731 | 6.961360 | TGTACTGATGTATCTCCGAAGAAT | 57.039 | 37.500 | 0.00 | 0.00 | 34.49 | 2.40 |
2545 | 2735 | 7.209471 | ACTGATGTATCTCCGAAGAATACTC | 57.791 | 40.000 | 0.00 | 0.00 | 34.49 | 2.59 |
2548 | 2738 | 7.597386 | TGATGTATCTCCGAAGAATACTCATG | 58.403 | 38.462 | 0.00 | 0.00 | 34.49 | 3.07 |
2551 | 2741 | 6.549736 | TGTATCTCCGAAGAATACTCATGGAA | 59.450 | 38.462 | 0.00 | 0.00 | 34.49 | 3.53 |
2552 | 2742 | 5.932619 | TCTCCGAAGAATACTCATGGAAA | 57.067 | 39.130 | 0.00 | 0.00 | 0.00 | 3.13 |
2555 | 2745 | 5.611374 | TCCGAAGAATACTCATGGAAATCC | 58.389 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
2810 | 3002 | 6.149474 | TGAAAGGCTTATGCTTAGTTTCTGAC | 59.851 | 38.462 | 0.00 | 0.00 | 39.59 | 3.51 |
2980 | 3172 | 1.678627 | GATGCTGCTAGAGAGAACGGA | 59.321 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
3055 | 3248 | 6.292923 | TCTTTTCTTTCCCGTCTATTGAACA | 58.707 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3086 | 3279 | 4.394729 | TCTGTAGTCATTTGGGTTGTTCC | 58.605 | 43.478 | 0.00 | 0.00 | 0.00 | 3.62 |
3089 | 3282 | 0.386731 | GTCATTTGGGTTGTTCCGCG | 60.387 | 55.000 | 0.00 | 0.00 | 37.00 | 6.46 |
3145 | 3343 | 7.936496 | TTGTATCAACAATGAATCAGCCTTA | 57.064 | 32.000 | 0.00 | 0.00 | 40.69 | 2.69 |
3180 | 3379 | 9.985730 | AGATTCATTTTCTGTTTATTTCTGCAA | 57.014 | 25.926 | 0.00 | 0.00 | 0.00 | 4.08 |
3210 | 3409 | 0.596082 | GCCGAAGCAGCCTTGTAAAA | 59.404 | 50.000 | 0.00 | 0.00 | 39.53 | 1.52 |
3220 | 3419 | 4.754322 | CAGCCTTGTAAAACCAACACTTT | 58.246 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
3224 | 3423 | 5.062934 | GCCTTGTAAAACCAACACTTTGAAC | 59.937 | 40.000 | 0.00 | 0.00 | 34.24 | 3.18 |
3225 | 3424 | 6.159988 | CCTTGTAAAACCAACACTTTGAACA | 58.840 | 36.000 | 0.00 | 0.00 | 34.24 | 3.18 |
3226 | 3425 | 6.816140 | CCTTGTAAAACCAACACTTTGAACAT | 59.184 | 34.615 | 0.00 | 0.00 | 34.24 | 2.71 |
3229 | 3428 | 7.378966 | TGTAAAACCAACACTTTGAACATGAA | 58.621 | 30.769 | 0.00 | 0.00 | 34.24 | 2.57 |
3230 | 3429 | 6.720012 | AAAACCAACACTTTGAACATGAAC | 57.280 | 33.333 | 0.00 | 0.00 | 34.24 | 3.18 |
3237 | 3436 | 6.698008 | ACACTTTGAACATGAACATTCAGA | 57.302 | 33.333 | 0.00 | 0.00 | 41.08 | 3.27 |
3238 | 3437 | 6.732154 | ACACTTTGAACATGAACATTCAGAG | 58.268 | 36.000 | 0.00 | 6.26 | 40.88 | 3.35 |
3242 | 3441 | 3.503363 | TGAACATGAACATTCAGAGTGCC | 59.497 | 43.478 | 0.00 | 0.13 | 41.08 | 5.01 |
3243 | 3442 | 2.079158 | ACATGAACATTCAGAGTGCCG | 58.921 | 47.619 | 0.00 | 0.00 | 41.08 | 5.69 |
3244 | 3443 | 2.289631 | ACATGAACATTCAGAGTGCCGA | 60.290 | 45.455 | 0.00 | 0.00 | 41.08 | 5.54 |
3245 | 3444 | 2.768253 | TGAACATTCAGAGTGCCGAT | 57.232 | 45.000 | 0.00 | 0.00 | 32.50 | 4.18 |
3249 | 3448 | 3.057969 | ACATTCAGAGTGCCGATTTGA | 57.942 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
3272 | 3471 | 7.810658 | TGAGCAAAATAACTGAGAAGAATCAC | 58.189 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
3273 | 3472 | 7.445096 | TGAGCAAAATAACTGAGAAGAATCACA | 59.555 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
3280 | 3479 | 5.998454 | ACTGAGAAGAATCACACACTTTG | 57.002 | 39.130 | 0.00 | 0.00 | 0.00 | 2.77 |
3291 | 3490 | 1.134946 | ACACACTTTGGCAGCTTCAAC | 59.865 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
3352 | 3579 | 3.627123 | TGGCATGTGAAATCCTGATTACG | 59.373 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
3381 | 3611 | 7.951530 | TCATATGTACACAGTAATGCATCTG | 57.048 | 36.000 | 12.58 | 12.58 | 37.65 | 2.90 |
3399 | 3629 | 5.824429 | CATCTGTGCTTGTTTTCTGAAAGA | 58.176 | 37.500 | 2.75 | 0.00 | 44.68 | 2.52 |
3400 | 3630 | 6.444633 | CATCTGTGCTTGTTTTCTGAAAGAT | 58.555 | 36.000 | 2.75 | 0.00 | 46.36 | 2.40 |
3401 | 3631 | 7.587629 | CATCTGTGCTTGTTTTCTGAAAGATA | 58.412 | 34.615 | 2.75 | 0.00 | 46.36 | 1.98 |
3402 | 3632 | 7.194607 | TCTGTGCTTGTTTTCTGAAAGATAG | 57.805 | 36.000 | 2.75 | 3.64 | 46.36 | 2.08 |
3403 | 3633 | 6.205464 | TCTGTGCTTGTTTTCTGAAAGATAGG | 59.795 | 38.462 | 2.75 | 0.00 | 46.36 | 2.57 |
3404 | 3634 | 6.061441 | TGTGCTTGTTTTCTGAAAGATAGGA | 58.939 | 36.000 | 2.75 | 1.21 | 46.36 | 2.94 |
3405 | 3635 | 6.205464 | TGTGCTTGTTTTCTGAAAGATAGGAG | 59.795 | 38.462 | 2.75 | 0.00 | 46.36 | 3.69 |
3439 | 3669 | 8.995027 | TGGTTTATATCATTTTGGTAGCTGAT | 57.005 | 30.769 | 0.00 | 0.00 | 33.21 | 2.90 |
3448 | 3678 | 9.717942 | ATCATTTTGGTAGCTGATAAGAGATAC | 57.282 | 33.333 | 0.00 | 0.00 | 34.66 | 2.24 |
3450 | 3680 | 8.768955 | CATTTTGGTAGCTGATAAGAGATACAC | 58.231 | 37.037 | 0.00 | 0.00 | 36.70 | 2.90 |
3451 | 3681 | 6.406692 | TTGGTAGCTGATAAGAGATACACC | 57.593 | 41.667 | 0.00 | 0.00 | 36.70 | 4.16 |
3452 | 3682 | 5.454966 | TGGTAGCTGATAAGAGATACACCA | 58.545 | 41.667 | 0.00 | 0.00 | 36.70 | 4.17 |
3453 | 3683 | 5.536538 | TGGTAGCTGATAAGAGATACACCAG | 59.463 | 44.000 | 0.00 | 0.00 | 36.70 | 4.00 |
3486 | 3716 | 4.282496 | ACACTGATTGGTCCCTAGACTAG | 58.718 | 47.826 | 2.18 | 2.18 | 43.05 | 2.57 |
3492 | 3722 | 1.860240 | TGGTCCCTAGACTAGGCTGAT | 59.140 | 52.381 | 21.54 | 0.00 | 44.86 | 2.90 |
3523 | 3753 | 9.057089 | ACCAAGCATTATTAGAGCAGTAATTAC | 57.943 | 33.333 | 7.57 | 7.57 | 0.00 | 1.89 |
3561 | 3791 | 0.235926 | GTCTTTCAGAGCAACACGCC | 59.764 | 55.000 | 0.00 | 0.00 | 44.04 | 5.68 |
3562 | 3792 | 0.884704 | TCTTTCAGAGCAACACGCCC | 60.885 | 55.000 | 0.00 | 0.00 | 44.04 | 6.13 |
3584 | 3814 | 1.522668 | AGCTTGCATAAACGTGCTGA | 58.477 | 45.000 | 0.00 | 0.00 | 45.27 | 4.26 |
3598 | 3828 | 1.455217 | GCTGATTGCAGGGAGGCAT | 60.455 | 57.895 | 0.00 | 0.00 | 44.48 | 4.40 |
3600 | 3830 | 0.106868 | CTGATTGCAGGGAGGCATCA | 60.107 | 55.000 | 0.00 | 0.00 | 44.48 | 3.07 |
3601 | 3831 | 0.554305 | TGATTGCAGGGAGGCATCAT | 59.446 | 50.000 | 0.00 | 0.00 | 44.48 | 2.45 |
3653 | 3894 | 1.372997 | CACACCGTCCTCTTGGTCG | 60.373 | 63.158 | 0.00 | 0.00 | 42.85 | 4.79 |
3671 | 3912 | 3.434641 | GGTCGCTGTCAATCATATCATGG | 59.565 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
3675 | 3916 | 6.369890 | GTCGCTGTCAATCATATCATGGTATT | 59.630 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
3679 | 3920 | 8.355169 | GCTGTCAATCATATCATGGTATTTGTT | 58.645 | 33.333 | 9.28 | 0.00 | 0.00 | 2.83 |
3689 | 3930 | 9.803507 | ATATCATGGTATTTGTTCATCATCTGT | 57.196 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
3697 | 3938 | 9.229784 | GTATTTGTTCATCATCTGTAGCAAATG | 57.770 | 33.333 | 0.00 | 0.00 | 35.46 | 2.32 |
3735 | 3983 | 2.729028 | AGGTGCCACATATGTTACCC | 57.271 | 50.000 | 21.47 | 13.29 | 32.81 | 3.69 |
3736 | 3984 | 1.214424 | AGGTGCCACATATGTTACCCC | 59.786 | 52.381 | 21.47 | 12.04 | 32.81 | 4.95 |
3737 | 3985 | 1.687563 | GTGCCACATATGTTACCCCC | 58.312 | 55.000 | 5.37 | 0.00 | 0.00 | 5.40 |
3738 | 3986 | 1.214424 | GTGCCACATATGTTACCCCCT | 59.786 | 52.381 | 5.37 | 0.00 | 0.00 | 4.79 |
3739 | 3987 | 1.493022 | TGCCACATATGTTACCCCCTC | 59.507 | 52.381 | 5.37 | 0.00 | 0.00 | 4.30 |
3740 | 3988 | 1.202891 | GCCACATATGTTACCCCCTCC | 60.203 | 57.143 | 5.37 | 0.00 | 0.00 | 4.30 |
3741 | 3989 | 2.131854 | CCACATATGTTACCCCCTCCA | 58.868 | 52.381 | 5.37 | 0.00 | 0.00 | 3.86 |
3742 | 3990 | 2.512056 | CCACATATGTTACCCCCTCCAA | 59.488 | 50.000 | 5.37 | 0.00 | 0.00 | 3.53 |
3743 | 3991 | 3.140144 | CCACATATGTTACCCCCTCCAAT | 59.860 | 47.826 | 5.37 | 0.00 | 0.00 | 3.16 |
3744 | 3992 | 4.398319 | CACATATGTTACCCCCTCCAATC | 58.602 | 47.826 | 5.37 | 0.00 | 0.00 | 2.67 |
3745 | 3993 | 3.397955 | ACATATGTTACCCCCTCCAATCC | 59.602 | 47.826 | 1.41 | 0.00 | 0.00 | 3.01 |
3746 | 3994 | 1.994399 | ATGTTACCCCCTCCAATCCA | 58.006 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3747 | 3995 | 1.761711 | TGTTACCCCCTCCAATCCAA | 58.238 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3748 | 3996 | 2.074579 | TGTTACCCCCTCCAATCCAAA | 58.925 | 47.619 | 0.00 | 0.00 | 0.00 | 3.28 |
3749 | 3997 | 2.657459 | TGTTACCCCCTCCAATCCAAAT | 59.343 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
3750 | 3998 | 3.078305 | TGTTACCCCCTCCAATCCAAATT | 59.922 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
3751 | 3999 | 4.295238 | TGTTACCCCCTCCAATCCAAATTA | 59.705 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
3752 | 4000 | 5.222568 | TGTTACCCCCTCCAATCCAAATTAA | 60.223 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3753 | 4001 | 4.642489 | ACCCCCTCCAATCCAAATTAAT | 57.358 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
3754 | 4002 | 4.971661 | ACCCCCTCCAATCCAAATTAATT | 58.028 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
3755 | 4003 | 4.721274 | ACCCCCTCCAATCCAAATTAATTG | 59.279 | 41.667 | 0.39 | 0.00 | 38.84 | 2.32 |
3756 | 4004 | 4.721274 | CCCCCTCCAATCCAAATTAATTGT | 59.279 | 41.667 | 0.39 | 0.00 | 37.32 | 2.71 |
3757 | 4005 | 5.163311 | CCCCCTCCAATCCAAATTAATTGTC | 60.163 | 44.000 | 0.39 | 0.00 | 37.32 | 3.18 |
3758 | 4006 | 5.451798 | CCCCTCCAATCCAAATTAATTGTCG | 60.452 | 44.000 | 0.39 | 0.00 | 37.32 | 4.35 |
3759 | 4007 | 5.043248 | CCTCCAATCCAAATTAATTGTCGC | 58.957 | 41.667 | 0.39 | 0.00 | 37.32 | 5.19 |
3760 | 4008 | 5.394005 | CCTCCAATCCAAATTAATTGTCGCA | 60.394 | 40.000 | 0.39 | 0.00 | 37.32 | 5.10 |
3761 | 4009 | 5.649557 | TCCAATCCAAATTAATTGTCGCAG | 58.350 | 37.500 | 0.39 | 0.00 | 37.32 | 5.18 |
3762 | 4010 | 4.268405 | CCAATCCAAATTAATTGTCGCAGC | 59.732 | 41.667 | 0.39 | 0.00 | 37.32 | 5.25 |
3763 | 4011 | 3.502191 | TCCAAATTAATTGTCGCAGCC | 57.498 | 42.857 | 0.39 | 0.00 | 37.32 | 4.85 |
3764 | 4012 | 2.822561 | TCCAAATTAATTGTCGCAGCCA | 59.177 | 40.909 | 0.39 | 0.00 | 37.32 | 4.75 |
3765 | 4013 | 3.446873 | TCCAAATTAATTGTCGCAGCCAT | 59.553 | 39.130 | 0.39 | 0.00 | 37.32 | 4.40 |
3766 | 4014 | 4.642437 | TCCAAATTAATTGTCGCAGCCATA | 59.358 | 37.500 | 0.39 | 0.00 | 37.32 | 2.74 |
3767 | 4015 | 4.977963 | CCAAATTAATTGTCGCAGCCATAG | 59.022 | 41.667 | 0.39 | 0.00 | 37.32 | 2.23 |
3768 | 4016 | 5.450412 | CCAAATTAATTGTCGCAGCCATAGT | 60.450 | 40.000 | 0.39 | 0.00 | 37.32 | 2.12 |
3769 | 4017 | 6.238621 | CCAAATTAATTGTCGCAGCCATAGTA | 60.239 | 38.462 | 0.39 | 0.00 | 37.32 | 1.82 |
3770 | 4018 | 5.924475 | ATTAATTGTCGCAGCCATAGTAC | 57.076 | 39.130 | 0.00 | 0.00 | 0.00 | 2.73 |
3771 | 4019 | 2.979814 | ATTGTCGCAGCCATAGTACA | 57.020 | 45.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3772 | 4020 | 2.753055 | TTGTCGCAGCCATAGTACAA | 57.247 | 45.000 | 0.00 | 0.00 | 0.00 | 2.41 |
3773 | 4021 | 2.979814 | TGTCGCAGCCATAGTACAAT | 57.020 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3774 | 4022 | 3.260475 | TGTCGCAGCCATAGTACAATT | 57.740 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
3775 | 4023 | 3.605634 | TGTCGCAGCCATAGTACAATTT | 58.394 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
3776 | 4024 | 4.006989 | TGTCGCAGCCATAGTACAATTTT | 58.993 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
3777 | 4025 | 4.142708 | TGTCGCAGCCATAGTACAATTTTG | 60.143 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
3778 | 4026 | 4.006989 | TCGCAGCCATAGTACAATTTTGT | 58.993 | 39.130 | 1.08 | 1.08 | 44.86 | 2.83 |
3779 | 4027 | 5.064198 | GTCGCAGCCATAGTACAATTTTGTA | 59.936 | 40.000 | 0.00 | 0.00 | 42.35 | 2.41 |
3780 | 4028 | 5.644206 | TCGCAGCCATAGTACAATTTTGTAA | 59.356 | 36.000 | 4.79 | 0.00 | 44.46 | 2.41 |
3781 | 4029 | 6.149640 | TCGCAGCCATAGTACAATTTTGTAAA | 59.850 | 34.615 | 4.79 | 0.00 | 44.46 | 2.01 |
3782 | 4030 | 6.804295 | CGCAGCCATAGTACAATTTTGTAAAA | 59.196 | 34.615 | 4.79 | 0.00 | 44.46 | 1.52 |
3783 | 4031 | 7.487829 | CGCAGCCATAGTACAATTTTGTAAAAT | 59.512 | 33.333 | 4.79 | 0.00 | 44.46 | 1.82 |
3784 | 4032 | 9.150348 | GCAGCCATAGTACAATTTTGTAAAATT | 57.850 | 29.630 | 8.99 | 8.99 | 46.42 | 1.82 |
3811 | 4059 | 9.768215 | AATTTGAATTAAAGGGAGTATCTGGAA | 57.232 | 29.630 | 0.00 | 0.00 | 33.73 | 3.53 |
3812 | 4060 | 9.942526 | ATTTGAATTAAAGGGAGTATCTGGAAT | 57.057 | 29.630 | 0.00 | 0.00 | 33.73 | 3.01 |
3856 | 4105 | 5.619132 | AAATTGAGGAATAGGGCAAATGG | 57.381 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
3952 | 4201 | 0.748450 | ATGCGGGGCAAATGATCAAG | 59.252 | 50.000 | 0.00 | 0.00 | 43.62 | 3.02 |
3953 | 4202 | 0.611618 | TGCGGGGCAAATGATCAAGT | 60.612 | 50.000 | 0.00 | 0.00 | 34.76 | 3.16 |
3954 | 4203 | 0.179129 | GCGGGGCAAATGATCAAGTG | 60.179 | 55.000 | 0.00 | 1.71 | 0.00 | 3.16 |
3955 | 4204 | 0.179129 | CGGGGCAAATGATCAAGTGC | 60.179 | 55.000 | 20.36 | 20.36 | 36.24 | 4.40 |
3959 | 4208 | 2.747396 | GCAAATGATCAAGTGCCCAA | 57.253 | 45.000 | 18.64 | 0.00 | 0.00 | 4.12 |
3960 | 4209 | 3.042871 | GCAAATGATCAAGTGCCCAAA | 57.957 | 42.857 | 18.64 | 0.00 | 0.00 | 3.28 |
3961 | 4210 | 3.602483 | GCAAATGATCAAGTGCCCAAAT | 58.398 | 40.909 | 18.64 | 0.00 | 0.00 | 2.32 |
3962 | 4211 | 4.757594 | GCAAATGATCAAGTGCCCAAATA | 58.242 | 39.130 | 18.64 | 0.00 | 0.00 | 1.40 |
3963 | 4212 | 5.177326 | GCAAATGATCAAGTGCCCAAATAA | 58.823 | 37.500 | 18.64 | 0.00 | 0.00 | 1.40 |
3964 | 4213 | 5.818857 | GCAAATGATCAAGTGCCCAAATAAT | 59.181 | 36.000 | 18.64 | 0.00 | 0.00 | 1.28 |
3965 | 4214 | 6.238266 | GCAAATGATCAAGTGCCCAAATAATG | 60.238 | 38.462 | 18.64 | 0.00 | 0.00 | 1.90 |
3966 | 4215 | 4.389890 | TGATCAAGTGCCCAAATAATGC | 57.610 | 40.909 | 0.00 | 0.00 | 0.00 | 3.56 |
3967 | 4216 | 2.937469 | TCAAGTGCCCAAATAATGCG | 57.063 | 45.000 | 0.00 | 0.00 | 0.00 | 4.73 |
3968 | 4217 | 1.476085 | TCAAGTGCCCAAATAATGCGG | 59.524 | 47.619 | 0.00 | 0.00 | 0.00 | 5.69 |
3980 | 4229 | 0.950836 | TAATGCGGGGCAAATGATCG | 59.049 | 50.000 | 0.00 | 0.00 | 43.62 | 3.69 |
3984 | 4233 | 0.040067 | GCGGGGCAAATGATCGAATC | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3989 | 4238 | 2.487986 | GGGCAAATGATCGAATCTCCCT | 60.488 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3990 | 4239 | 3.217626 | GGCAAATGATCGAATCTCCCTT | 58.782 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
3992 | 4241 | 4.133078 | GCAAATGATCGAATCTCCCTTCT | 58.867 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
795 | 833 | 9.986833 | GAACAAAAAGAAAAGCAAAATACACAT | 57.013 | 25.926 | 0.00 | 0.00 | 0.00 | 3.21 |
860 | 901 | 3.071479 | GCTGGACCGAATTACAGAAACA | 58.929 | 45.455 | 0.00 | 0.00 | 32.86 | 2.83 |
861 | 902 | 3.071479 | TGCTGGACCGAATTACAGAAAC | 58.929 | 45.455 | 0.00 | 0.00 | 32.86 | 2.78 |
878 | 919 | 3.789858 | CTGCGCTGCTGTCTGCTG | 61.790 | 66.667 | 9.73 | 3.90 | 43.37 | 4.41 |
879 | 920 | 3.936204 | CTCTGCGCTGCTGTCTGCT | 62.936 | 63.158 | 9.73 | 0.00 | 43.37 | 4.24 |
880 | 921 | 3.488978 | CTCTGCGCTGCTGTCTGC | 61.489 | 66.667 | 9.73 | 0.00 | 43.25 | 4.26 |
881 | 922 | 3.488978 | GCTCTGCGCTGCTGTCTG | 61.489 | 66.667 | 9.73 | 0.00 | 35.14 | 3.51 |
882 | 923 | 3.936204 | CTGCTCTGCGCTGCTGTCT | 62.936 | 63.158 | 9.73 | 0.00 | 40.11 | 3.41 |
883 | 924 | 3.488978 | CTGCTCTGCGCTGCTGTC | 61.489 | 66.667 | 9.73 | 0.00 | 40.11 | 3.51 |
891 | 937 | 2.723010 | CGTTTCTTTAAGCTGCTCTGCG | 60.723 | 50.000 | 1.00 | 0.00 | 38.13 | 5.18 |
985 | 1031 | 4.824166 | CATGGCTCACTTGCGCGC | 62.824 | 66.667 | 27.26 | 27.26 | 0.00 | 6.86 |
986 | 1032 | 4.824166 | GCATGGCTCACTTGCGCG | 62.824 | 66.667 | 0.00 | 0.00 | 39.94 | 6.86 |
1140 | 1187 | 4.643387 | GGCGTGGACACCTTGGCT | 62.643 | 66.667 | 0.00 | 0.00 | 0.00 | 4.75 |
1227 | 1274 | 6.189859 | TGAAAATACTGGATGCCAATCTTCT | 58.810 | 36.000 | 0.00 | 0.00 | 30.80 | 2.85 |
1238 | 1285 | 7.038017 | TGGAAGAGAGACTTGAAAATACTGGAT | 60.038 | 37.037 | 0.00 | 0.00 | 39.13 | 3.41 |
1242 | 1289 | 7.120432 | GCATTGGAAGAGAGACTTGAAAATACT | 59.880 | 37.037 | 0.00 | 0.00 | 39.13 | 2.12 |
1243 | 1290 | 7.247019 | GCATTGGAAGAGAGACTTGAAAATAC | 58.753 | 38.462 | 0.00 | 0.00 | 39.13 | 1.89 |
1246 | 1293 | 4.214119 | CGCATTGGAAGAGAGACTTGAAAA | 59.786 | 41.667 | 0.00 | 0.00 | 39.13 | 2.29 |
1250 | 1297 | 1.396301 | GCGCATTGGAAGAGAGACTTG | 59.604 | 52.381 | 0.30 | 0.00 | 39.13 | 3.16 |
1300 | 1348 | 7.581814 | TGAATTCCATAGAGAGAGAGAGAGAA | 58.418 | 38.462 | 2.27 | 0.00 | 0.00 | 2.87 |
1301 | 1349 | 7.147958 | TGAATTCCATAGAGAGAGAGAGAGA | 57.852 | 40.000 | 2.27 | 0.00 | 0.00 | 3.10 |
1382 | 1430 | 5.483811 | TCGAACATCCAAATGTAAGCTACA | 58.516 | 37.500 | 0.00 | 0.00 | 45.48 | 2.74 |
1391 | 1439 | 3.788333 | AGGCATTCGAACATCCAAATG | 57.212 | 42.857 | 0.00 | 0.00 | 38.93 | 2.32 |
1394 | 1442 | 3.342377 | TGTAGGCATTCGAACATCCAA | 57.658 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
1395 | 1443 | 3.270027 | CTTGTAGGCATTCGAACATCCA | 58.730 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1396 | 1444 | 2.032178 | GCTTGTAGGCATTCGAACATCC | 59.968 | 50.000 | 0.00 | 1.71 | 0.00 | 3.51 |
1402 | 1450 | 1.550524 | AGACAGCTTGTAGGCATTCGA | 59.449 | 47.619 | 0.00 | 0.00 | 34.17 | 3.71 |
1403 | 1451 | 1.662629 | CAGACAGCTTGTAGGCATTCG | 59.337 | 52.381 | 0.00 | 0.00 | 34.17 | 3.34 |
1407 | 1466 | 0.764890 | AACCAGACAGCTTGTAGGCA | 59.235 | 50.000 | 0.00 | 0.00 | 31.14 | 4.75 |
1409 | 1468 | 1.611673 | CCCAACCAGACAGCTTGTAGG | 60.612 | 57.143 | 0.00 | 0.00 | 33.40 | 3.18 |
1412 | 1471 | 1.529244 | GCCCAACCAGACAGCTTGT | 60.529 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
1417 | 1476 | 2.281761 | AAGCGCCCAACCAGACAG | 60.282 | 61.111 | 2.29 | 0.00 | 0.00 | 3.51 |
1431 | 1490 | 1.905922 | GCGTCAACAGGAGCTCAAGC | 61.906 | 60.000 | 17.19 | 3.77 | 42.49 | 4.01 |
1448 | 1515 | 1.940883 | TAACTACGGGAGGCAGTGCG | 61.941 | 60.000 | 9.45 | 0.00 | 30.90 | 5.34 |
1452 | 1519 | 3.329929 | AAAACTAACTACGGGAGGCAG | 57.670 | 47.619 | 0.00 | 0.00 | 0.00 | 4.85 |
1476 | 1559 | 5.449862 | GCAGTCATTGGTTGAAACACTTGTA | 60.450 | 40.000 | 0.00 | 0.00 | 35.70 | 2.41 |
1478 | 1561 | 3.798337 | GCAGTCATTGGTTGAAACACTTG | 59.202 | 43.478 | 0.00 | 0.00 | 35.70 | 3.16 |
1487 | 1570 | 0.599558 | CCAGTGGCAGTCATTGGTTG | 59.400 | 55.000 | 8.41 | 0.00 | 45.10 | 3.77 |
1488 | 1571 | 3.040965 | CCAGTGGCAGTCATTGGTT | 57.959 | 52.632 | 8.41 | 0.00 | 45.10 | 3.67 |
1518 | 1601 | 2.248374 | ACCATGGCAACCCCCTGAT | 61.248 | 57.895 | 13.04 | 0.00 | 31.44 | 2.90 |
1522 | 1605 | 3.991318 | TCCACCATGGCAACCCCC | 61.991 | 66.667 | 13.04 | 0.00 | 37.47 | 5.40 |
1526 | 1609 | 0.962356 | CTCCTGTCCACCATGGCAAC | 60.962 | 60.000 | 13.04 | 8.25 | 37.47 | 4.17 |
1531 | 1614 | 2.124983 | CCGCTCCTGTCCACCATG | 60.125 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
1537 | 1698 | 0.323957 | AACTTAACCCGCTCCTGTCC | 59.676 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1540 | 1701 | 5.470047 | AGATATAACTTAACCCGCTCCTG | 57.530 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
1541 | 1702 | 6.552350 | TGTAAGATATAACTTAACCCGCTCCT | 59.448 | 38.462 | 4.20 | 0.00 | 34.74 | 3.69 |
1542 | 1703 | 6.752168 | TGTAAGATATAACTTAACCCGCTCC | 58.248 | 40.000 | 4.20 | 0.00 | 34.74 | 4.70 |
1575 | 1736 | 1.133790 | CTGTGCCTAGCTTGCATTTCC | 59.866 | 52.381 | 12.98 | 2.46 | 41.46 | 3.13 |
1576 | 1737 | 2.086869 | TCTGTGCCTAGCTTGCATTTC | 58.913 | 47.619 | 12.98 | 2.77 | 41.46 | 2.17 |
1578 | 1739 | 2.205022 | TTCTGTGCCTAGCTTGCATT | 57.795 | 45.000 | 12.98 | 0.00 | 41.46 | 3.56 |
1608 | 1770 | 3.243704 | TGCATGCCCTTTTGTGTTTCTAC | 60.244 | 43.478 | 16.68 | 0.00 | 0.00 | 2.59 |
1609 | 1771 | 2.961741 | TGCATGCCCTTTTGTGTTTCTA | 59.038 | 40.909 | 16.68 | 0.00 | 0.00 | 2.10 |
1611 | 1773 | 1.866601 | GTGCATGCCCTTTTGTGTTTC | 59.133 | 47.619 | 16.68 | 0.00 | 0.00 | 2.78 |
1615 | 1779 | 1.068895 | TCAAGTGCATGCCCTTTTGTG | 59.931 | 47.619 | 13.10 | 2.95 | 0.00 | 3.33 |
1617 | 1781 | 2.529780 | TTCAAGTGCATGCCCTTTTG | 57.470 | 45.000 | 13.10 | 12.36 | 0.00 | 2.44 |
1619 | 1783 | 3.775261 | AAATTCAAGTGCATGCCCTTT | 57.225 | 38.095 | 13.10 | 2.67 | 0.00 | 3.11 |
1621 | 1785 | 2.762327 | CCTAAATTCAAGTGCATGCCCT | 59.238 | 45.455 | 16.68 | 5.90 | 0.00 | 5.19 |
1622 | 1786 | 2.760092 | TCCTAAATTCAAGTGCATGCCC | 59.240 | 45.455 | 16.68 | 2.78 | 0.00 | 5.36 |
1623 | 1787 | 4.660789 | ATCCTAAATTCAAGTGCATGCC | 57.339 | 40.909 | 16.68 | 6.65 | 0.00 | 4.40 |
1628 | 1792 | 7.391148 | TGGTTTCTATCCTAAATTCAAGTGC | 57.609 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1629 | 1793 | 9.231297 | TCTTGGTTTCTATCCTAAATTCAAGTG | 57.769 | 33.333 | 0.00 | 0.00 | 34.80 | 3.16 |
1630 | 1794 | 9.232473 | GTCTTGGTTTCTATCCTAAATTCAAGT | 57.768 | 33.333 | 0.00 | 0.00 | 34.80 | 3.16 |
1631 | 1795 | 9.231297 | TGTCTTGGTTTCTATCCTAAATTCAAG | 57.769 | 33.333 | 0.00 | 0.00 | 34.68 | 3.02 |
1632 | 1796 | 9.581289 | TTGTCTTGGTTTCTATCCTAAATTCAA | 57.419 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
1633 | 1797 | 9.581289 | TTTGTCTTGGTTTCTATCCTAAATTCA | 57.419 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
1640 | 1804 | 6.833933 | ACTGTTTTTGTCTTGGTTTCTATCCT | 59.166 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
1641 | 1805 | 7.039313 | ACTGTTTTTGTCTTGGTTTCTATCC | 57.961 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1642 | 1806 | 8.926715 | AAACTGTTTTTGTCTTGGTTTCTATC | 57.073 | 30.769 | 0.00 | 0.00 | 0.00 | 2.08 |
1643 | 1807 | 8.527810 | TGAAACTGTTTTTGTCTTGGTTTCTAT | 58.472 | 29.630 | 7.28 | 0.00 | 40.56 | 1.98 |
1644 | 1808 | 7.887381 | TGAAACTGTTTTTGTCTTGGTTTCTA | 58.113 | 30.769 | 7.28 | 2.36 | 40.56 | 2.10 |
1645 | 1809 | 6.754193 | TGAAACTGTTTTTGTCTTGGTTTCT | 58.246 | 32.000 | 7.28 | 0.00 | 40.56 | 2.52 |
1649 | 1813 | 5.105756 | CCTCTGAAACTGTTTTTGTCTTGGT | 60.106 | 40.000 | 7.28 | 0.00 | 0.00 | 3.67 |
1651 | 1815 | 5.105756 | ACCCTCTGAAACTGTTTTTGTCTTG | 60.106 | 40.000 | 7.28 | 0.00 | 0.00 | 3.02 |
1653 | 1817 | 4.399303 | CACCCTCTGAAACTGTTTTTGTCT | 59.601 | 41.667 | 7.28 | 0.00 | 0.00 | 3.41 |
1654 | 1818 | 4.398044 | TCACCCTCTGAAACTGTTTTTGTC | 59.602 | 41.667 | 7.28 | 0.00 | 0.00 | 3.18 |
1655 | 1819 | 4.157840 | GTCACCCTCTGAAACTGTTTTTGT | 59.842 | 41.667 | 7.28 | 0.00 | 0.00 | 2.83 |
1656 | 1820 | 4.672409 | GTCACCCTCTGAAACTGTTTTTG | 58.328 | 43.478 | 7.28 | 3.99 | 0.00 | 2.44 |
1657 | 1821 | 3.377172 | CGTCACCCTCTGAAACTGTTTTT | 59.623 | 43.478 | 7.28 | 0.00 | 0.00 | 1.94 |
1660 | 1824 | 1.760613 | TCGTCACCCTCTGAAACTGTT | 59.239 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
1661 | 1825 | 1.410004 | TCGTCACCCTCTGAAACTGT | 58.590 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1662 | 1826 | 2.526304 | TTCGTCACCCTCTGAAACTG | 57.474 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1663 | 1827 | 2.289694 | CCATTCGTCACCCTCTGAAACT | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
1665 | 1829 | 1.697432 | ACCATTCGTCACCCTCTGAAA | 59.303 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
1670 | 1834 | 0.535335 | TAGCACCATTCGTCACCCTC | 59.465 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1702 | 1866 | 9.096160 | CATTGGCAAAAACATAAGCATATACAA | 57.904 | 29.630 | 3.01 | 0.00 | 0.00 | 2.41 |
1709 | 1873 | 4.613925 | TCCATTGGCAAAAACATAAGCA | 57.386 | 36.364 | 3.01 | 0.00 | 0.00 | 3.91 |
1719 | 1883 | 0.903942 | GGCCTGATTCCATTGGCAAA | 59.096 | 50.000 | 3.01 | 0.00 | 46.53 | 3.68 |
1723 | 1887 | 2.093869 | CACAAAGGCCTGATTCCATTGG | 60.094 | 50.000 | 5.69 | 0.00 | 36.81 | 3.16 |
1737 | 1901 | 8.055279 | AGGAATTATGTACAATGACACAAAGG | 57.945 | 34.615 | 0.00 | 0.00 | 30.52 | 3.11 |
1741 | 1905 | 8.628630 | TGAAAGGAATTATGTACAATGACACA | 57.371 | 30.769 | 0.00 | 0.00 | 30.52 | 3.72 |
1782 | 1948 | 1.220477 | GCTGAGTCTTGGCCTCTCC | 59.780 | 63.158 | 3.32 | 0.00 | 0.00 | 3.71 |
1952 | 2118 | 7.067008 | CGGAGTATGAAACAAAAAGGTATGGAT | 59.933 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
1954 | 2120 | 6.150474 | ACGGAGTATGAAACAAAAAGGTATGG | 59.850 | 38.462 | 0.00 | 0.00 | 41.94 | 2.74 |
1974 | 2140 | 7.171630 | AGGACCATATTAGCTTAATACGGAG | 57.828 | 40.000 | 12.15 | 0.00 | 36.38 | 4.63 |
1975 | 2141 | 8.111545 | TCTAGGACCATATTAGCTTAATACGGA | 58.888 | 37.037 | 12.15 | 0.00 | 36.38 | 4.69 |
1976 | 2142 | 8.289939 | TCTAGGACCATATTAGCTTAATACGG | 57.710 | 38.462 | 0.00 | 0.00 | 39.29 | 4.02 |
2004 | 2170 | 9.195411 | CACAAAACTAGTTGATAAATGTGCATT | 57.805 | 29.630 | 9.34 | 0.00 | 32.59 | 3.56 |
2005 | 2171 | 8.575589 | TCACAAAACTAGTTGATAAATGTGCAT | 58.424 | 29.630 | 9.34 | 0.00 | 36.49 | 3.96 |
2006 | 2172 | 7.935520 | TCACAAAACTAGTTGATAAATGTGCA | 58.064 | 30.769 | 9.34 | 6.12 | 36.49 | 4.57 |
2007 | 2173 | 8.970691 | ATCACAAAACTAGTTGATAAATGTGC | 57.029 | 30.769 | 9.34 | 0.00 | 36.49 | 4.57 |
2008 | 2174 | 9.559958 | GGATCACAAAACTAGTTGATAAATGTG | 57.440 | 33.333 | 9.34 | 15.76 | 37.55 | 3.21 |
2009 | 2175 | 9.520515 | AGGATCACAAAACTAGTTGATAAATGT | 57.479 | 29.630 | 9.34 | 5.42 | 32.59 | 2.71 |
2022 | 2188 | 2.939103 | GCGAGCATAGGATCACAAAACT | 59.061 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
2058 | 2238 | 5.712446 | TGCTGCCAGTTAAAATGGTATACAA | 59.288 | 36.000 | 5.01 | 0.00 | 40.17 | 2.41 |
2114 | 2298 | 1.534595 | GAGAGCCAGTTTGACTGCAAG | 59.465 | 52.381 | 2.59 | 0.00 | 44.63 | 4.01 |
2119 | 2303 | 7.782644 | AGAGTATAATAGAGAGCCAGTTTGACT | 59.217 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
2191 | 2375 | 9.672673 | TTGGTCAATTTTTGGATGAAACTTTTA | 57.327 | 25.926 | 0.00 | 0.00 | 0.00 | 1.52 |
2192 | 2376 | 8.572855 | TTGGTCAATTTTTGGATGAAACTTTT | 57.427 | 26.923 | 0.00 | 0.00 | 0.00 | 2.27 |
2196 | 2380 | 6.238621 | GGGTTTGGTCAATTTTTGGATGAAAC | 60.239 | 38.462 | 0.00 | 0.00 | 0.00 | 2.78 |
2229 | 2414 | 8.043710 | ACCTCTCAAAATCTCTATTCGTTCAAT | 58.956 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2232 | 2417 | 6.256757 | CCACCTCTCAAAATCTCTATTCGTTC | 59.743 | 42.308 | 0.00 | 0.00 | 0.00 | 3.95 |
2236 | 2421 | 7.106239 | TGTTCCACCTCTCAAAATCTCTATTC | 58.894 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
2238 | 2423 | 6.627087 | TGTTCCACCTCTCAAAATCTCTAT | 57.373 | 37.500 | 0.00 | 0.00 | 0.00 | 1.98 |
2239 | 2424 | 6.433847 | TTGTTCCACCTCTCAAAATCTCTA | 57.566 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
2259 | 2444 | 5.625150 | ACAGAGAGAAAGGTGCTTTATTGT | 58.375 | 37.500 | 0.00 | 0.00 | 33.49 | 2.71 |
2263 | 2448 | 5.063880 | GGAAACAGAGAGAAAGGTGCTTTA | 58.936 | 41.667 | 0.00 | 0.00 | 33.49 | 1.85 |
2269 | 2454 | 6.455690 | AAATAGGGAAACAGAGAGAAAGGT | 57.544 | 37.500 | 0.00 | 0.00 | 0.00 | 3.50 |
2313 | 2498 | 8.677148 | ATGGCAAACGTCTATTTATGAACTAT | 57.323 | 30.769 | 0.00 | 0.00 | 0.00 | 2.12 |
2315 | 2500 | 7.985184 | TCTATGGCAAACGTCTATTTATGAACT | 59.015 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
2329 | 2514 | 5.678132 | TCATGAATCATCTATGGCAAACG | 57.322 | 39.130 | 0.00 | 0.00 | 0.00 | 3.60 |
2337 | 2522 | 9.692749 | GCAATTGAACAATCATGAATCATCTAT | 57.307 | 29.630 | 10.34 | 0.00 | 34.96 | 1.98 |
2339 | 2524 | 7.706607 | CAGCAATTGAACAATCATGAATCATCT | 59.293 | 33.333 | 10.34 | 0.00 | 34.96 | 2.90 |
2344 | 2529 | 4.873827 | GCCAGCAATTGAACAATCATGAAT | 59.126 | 37.500 | 10.34 | 0.00 | 34.96 | 2.57 |
2345 | 2530 | 4.247258 | GCCAGCAATTGAACAATCATGAA | 58.753 | 39.130 | 10.34 | 0.00 | 34.96 | 2.57 |
2356 | 2541 | 0.818938 | ATCGCAATGCCAGCAATTGA | 59.181 | 45.000 | 10.34 | 4.92 | 0.00 | 2.57 |
2394 | 2579 | 8.956426 | GGTGAATCAAAGAACTAATAATGGTCA | 58.044 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
2395 | 2580 | 8.122952 | CGGTGAATCAAAGAACTAATAATGGTC | 58.877 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
2396 | 2581 | 7.827236 | TCGGTGAATCAAAGAACTAATAATGGT | 59.173 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
2400 | 2585 | 7.274904 | CGACTCGGTGAATCAAAGAACTAATAA | 59.725 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
2402 | 2587 | 5.577164 | CGACTCGGTGAATCAAAGAACTAAT | 59.423 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2413 | 2599 | 0.173708 | AGGCTTCGACTCGGTGAATC | 59.826 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2416 | 2602 | 0.607217 | TGTAGGCTTCGACTCGGTGA | 60.607 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2493 | 2680 | 6.139679 | TGTTCCCTTGGATTATCAGAGTTT | 57.860 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
2508 | 2695 | 7.200434 | AGATACATCAGTACAATGTTCCCTT | 57.800 | 36.000 | 16.22 | 1.75 | 38.31 | 3.95 |
2541 | 2731 | 2.766263 | AGAGCACGGATTTCCATGAGTA | 59.234 | 45.455 | 0.00 | 0.00 | 29.05 | 2.59 |
2545 | 2735 | 0.379669 | GCAGAGCACGGATTTCCATG | 59.620 | 55.000 | 0.00 | 0.00 | 35.14 | 3.66 |
2548 | 2738 | 4.301505 | TGCAGAGCACGGATTTCC | 57.698 | 55.556 | 0.00 | 0.00 | 31.71 | 3.13 |
2768 | 2960 | 8.409358 | AGCCTTTCATTAAGAAACAACTACAT | 57.591 | 30.769 | 0.00 | 0.00 | 41.17 | 2.29 |
2810 | 3002 | 1.136252 | CACCGCAACATTGAACTCTCG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 4.04 |
2826 | 3018 | 0.821711 | TTCCTGGAAACCAAGCACCG | 60.822 | 55.000 | 6.68 | 0.00 | 30.80 | 4.94 |
2980 | 3172 | 7.630242 | TCAACAGAAAATTCAGAACTCAAGT | 57.370 | 32.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3055 | 3248 | 6.833933 | ACCCAAATGACTACAGAAAGAACTTT | 59.166 | 34.615 | 0.00 | 0.00 | 35.14 | 2.66 |
3089 | 3282 | 2.310538 | CATTAAAGAGGGGCCATGTCC | 58.689 | 52.381 | 4.39 | 0.00 | 0.00 | 4.02 |
3132 | 3330 | 6.189859 | TCTTCCATTTGTAAGGCTGATTCAT | 58.810 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3169 | 3367 | 4.931002 | GCAGAAGCCAAATTGCAGAAATAA | 59.069 | 37.500 | 0.00 | 0.00 | 36.59 | 1.40 |
3194 | 3393 | 3.181480 | TGTTGGTTTTACAAGGCTGCTTC | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
3196 | 3395 | 2.100749 | GTGTTGGTTTTACAAGGCTGCT | 59.899 | 45.455 | 0.00 | 0.00 | 0.00 | 4.24 |
3200 | 3399 | 4.749976 | TCAAAGTGTTGGTTTTACAAGGC | 58.250 | 39.130 | 0.00 | 0.00 | 35.29 | 4.35 |
3210 | 3409 | 5.596836 | ATGTTCATGTTCAAAGTGTTGGT | 57.403 | 34.783 | 0.00 | 0.00 | 35.29 | 3.67 |
3220 | 3419 | 3.503363 | GGCACTCTGAATGTTCATGTTCA | 59.497 | 43.478 | 0.00 | 0.00 | 36.46 | 3.18 |
3224 | 3423 | 2.349590 | TCGGCACTCTGAATGTTCATG | 58.650 | 47.619 | 0.00 | 0.00 | 36.46 | 3.07 |
3225 | 3424 | 2.768253 | TCGGCACTCTGAATGTTCAT | 57.232 | 45.000 | 0.00 | 0.00 | 36.46 | 2.57 |
3226 | 3425 | 2.768253 | ATCGGCACTCTGAATGTTCA | 57.232 | 45.000 | 0.00 | 0.00 | 35.57 | 3.18 |
3229 | 3428 | 3.005554 | CTCAAATCGGCACTCTGAATGT | 58.994 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
3230 | 3429 | 2.223203 | GCTCAAATCGGCACTCTGAATG | 60.223 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
3237 | 3436 | 4.218417 | AGTTATTTTGCTCAAATCGGCACT | 59.782 | 37.500 | 0.00 | 0.00 | 38.23 | 4.40 |
3238 | 3437 | 4.324402 | CAGTTATTTTGCTCAAATCGGCAC | 59.676 | 41.667 | 0.00 | 0.00 | 38.23 | 5.01 |
3242 | 3441 | 7.521529 | TCTTCTCAGTTATTTTGCTCAAATCG | 58.478 | 34.615 | 0.00 | 0.00 | 36.43 | 3.34 |
3243 | 3442 | 9.852091 | ATTCTTCTCAGTTATTTTGCTCAAATC | 57.148 | 29.630 | 0.00 | 0.00 | 36.43 | 2.17 |
3244 | 3443 | 9.852091 | GATTCTTCTCAGTTATTTTGCTCAAAT | 57.148 | 29.630 | 0.00 | 0.90 | 38.69 | 2.32 |
3245 | 3444 | 8.849168 | TGATTCTTCTCAGTTATTTTGCTCAAA | 58.151 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
3249 | 3448 | 7.229306 | TGTGTGATTCTTCTCAGTTATTTTGCT | 59.771 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
3272 | 3471 | 1.134753 | TGTTGAAGCTGCCAAAGTGTG | 59.865 | 47.619 | 0.00 | 0.00 | 0.00 | 3.82 |
3273 | 3472 | 1.134946 | GTGTTGAAGCTGCCAAAGTGT | 59.865 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
3280 | 3479 | 3.665190 | AGTACTAAGTGTTGAAGCTGCC | 58.335 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
3338 | 3565 | 9.003658 | ACATATGAATTCCGTAATCAGGATTTC | 57.996 | 33.333 | 10.38 | 10.98 | 43.25 | 2.17 |
3352 | 3579 | 8.153479 | TGCATTACTGTGTACATATGAATTCC | 57.847 | 34.615 | 10.38 | 0.00 | 0.00 | 3.01 |
3381 | 3611 | 6.205658 | ACTCCTATCTTTCAGAAAACAAGCAC | 59.794 | 38.462 | 0.00 | 0.00 | 0.00 | 4.40 |
3439 | 3669 | 7.931015 | ATCCCAATTACTGGTGTATCTCTTA | 57.069 | 36.000 | 0.00 | 0.00 | 44.76 | 2.10 |
3440 | 3670 | 6.831664 | ATCCCAATTACTGGTGTATCTCTT | 57.168 | 37.500 | 0.00 | 0.00 | 44.76 | 2.85 |
3442 | 3672 | 6.929606 | GTGTATCCCAATTACTGGTGTATCTC | 59.070 | 42.308 | 0.00 | 0.00 | 44.76 | 2.75 |
3443 | 3673 | 6.615726 | AGTGTATCCCAATTACTGGTGTATCT | 59.384 | 38.462 | 0.00 | 0.00 | 44.76 | 1.98 |
3444 | 3674 | 6.706270 | CAGTGTATCCCAATTACTGGTGTATC | 59.294 | 42.308 | 0.00 | 0.00 | 44.76 | 2.24 |
3445 | 3675 | 6.385759 | TCAGTGTATCCCAATTACTGGTGTAT | 59.614 | 38.462 | 0.00 | 0.00 | 44.76 | 2.29 |
3448 | 3678 | 5.097742 | TCAGTGTATCCCAATTACTGGTG | 57.902 | 43.478 | 0.00 | 0.00 | 44.76 | 4.17 |
3450 | 3680 | 5.532406 | CCAATCAGTGTATCCCAATTACTGG | 59.468 | 44.000 | 0.00 | 0.00 | 45.97 | 4.00 |
3451 | 3681 | 6.122277 | ACCAATCAGTGTATCCCAATTACTG | 58.878 | 40.000 | 0.00 | 0.00 | 39.95 | 2.74 |
3452 | 3682 | 6.327386 | ACCAATCAGTGTATCCCAATTACT | 57.673 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
3453 | 3683 | 5.531287 | GGACCAATCAGTGTATCCCAATTAC | 59.469 | 44.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3486 | 3716 | 1.180029 | ATGCTTGGTTGTCATCAGCC | 58.820 | 50.000 | 0.00 | 0.00 | 43.74 | 4.85 |
3492 | 3722 | 5.252547 | TGCTCTAATAATGCTTGGTTGTCA | 58.747 | 37.500 | 0.00 | 0.00 | 0.00 | 3.58 |
3523 | 3753 | 2.132762 | ACTAAAACTTCAGCGTCACCG | 58.867 | 47.619 | 0.00 | 0.00 | 37.07 | 4.94 |
3543 | 3773 | 0.884704 | GGGCGTGTTGCTCTGAAAGA | 60.885 | 55.000 | 0.00 | 0.00 | 42.52 | 2.52 |
3561 | 3791 | 2.719798 | GCACGTTTATGCAAGCTATGG | 58.280 | 47.619 | 0.00 | 0.00 | 45.39 | 2.74 |
3584 | 3814 | 0.851469 | AGATGATGCCTCCCTGCAAT | 59.149 | 50.000 | 0.00 | 0.00 | 45.84 | 3.56 |
3590 | 3820 | 3.281727 | TTGTAACAGATGATGCCTCCC | 57.718 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
3636 | 3877 | 3.048602 | CGACCAAGAGGACGGTGT | 58.951 | 61.111 | 0.00 | 0.00 | 46.84 | 4.16 |
3653 | 3894 | 7.879070 | ACAAATACCATGATATGATTGACAGC | 58.121 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
3671 | 3912 | 9.229784 | CATTTGCTACAGATGATGAACAAATAC | 57.770 | 33.333 | 0.00 | 0.00 | 37.23 | 1.89 |
3675 | 3916 | 5.945191 | TCCATTTGCTACAGATGATGAACAA | 59.055 | 36.000 | 0.05 | 0.00 | 28.98 | 2.83 |
3679 | 3920 | 6.829849 | TGTATCCATTTGCTACAGATGATGA | 58.170 | 36.000 | 0.05 | 0.00 | 28.98 | 2.92 |
3689 | 3930 | 5.655974 | TGCAATTCCTTGTATCCATTTGCTA | 59.344 | 36.000 | 0.00 | 0.00 | 39.08 | 3.49 |
3697 | 3938 | 5.170748 | CACCTTTTGCAATTCCTTGTATCC | 58.829 | 41.667 | 0.00 | 0.00 | 34.69 | 2.59 |
3727 | 3975 | 1.994399 | TGGATTGGAGGGGGTAACAT | 58.006 | 50.000 | 0.00 | 0.00 | 39.74 | 2.71 |
3729 | 3977 | 2.911552 | TTTGGATTGGAGGGGGTAAC | 57.088 | 50.000 | 0.00 | 0.00 | 0.00 | 2.50 |
3733 | 3981 | 4.721274 | ACAATTAATTTGGATTGGAGGGGG | 59.279 | 41.667 | 0.00 | 0.00 | 39.80 | 5.40 |
3735 | 3983 | 5.591099 | CGACAATTAATTTGGATTGGAGGG | 58.409 | 41.667 | 0.00 | 0.00 | 39.80 | 4.30 |
3736 | 3984 | 5.043248 | GCGACAATTAATTTGGATTGGAGG | 58.957 | 41.667 | 0.00 | 0.00 | 39.80 | 4.30 |
3737 | 3985 | 5.649557 | TGCGACAATTAATTTGGATTGGAG | 58.350 | 37.500 | 0.00 | 7.25 | 39.80 | 3.86 |
3738 | 3986 | 5.649557 | CTGCGACAATTAATTTGGATTGGA | 58.350 | 37.500 | 0.00 | 0.00 | 39.80 | 3.53 |
3739 | 3987 | 4.268405 | GCTGCGACAATTAATTTGGATTGG | 59.732 | 41.667 | 0.00 | 0.00 | 39.80 | 3.16 |
3740 | 3988 | 4.268405 | GGCTGCGACAATTAATTTGGATTG | 59.732 | 41.667 | 0.00 | 7.11 | 39.80 | 2.67 |
3741 | 3989 | 4.081752 | TGGCTGCGACAATTAATTTGGATT | 60.082 | 37.500 | 0.00 | 0.00 | 39.80 | 3.01 |
3742 | 3990 | 3.446873 | TGGCTGCGACAATTAATTTGGAT | 59.553 | 39.130 | 0.00 | 0.00 | 39.80 | 3.41 |
3743 | 3991 | 2.822561 | TGGCTGCGACAATTAATTTGGA | 59.177 | 40.909 | 0.00 | 0.00 | 39.80 | 3.53 |
3744 | 3992 | 3.229276 | TGGCTGCGACAATTAATTTGG | 57.771 | 42.857 | 0.00 | 0.00 | 39.80 | 3.28 |
3745 | 3993 | 5.581605 | ACTATGGCTGCGACAATTAATTTG | 58.418 | 37.500 | 0.00 | 0.00 | 41.36 | 2.32 |
3746 | 3994 | 5.835113 | ACTATGGCTGCGACAATTAATTT | 57.165 | 34.783 | 0.00 | 0.00 | 0.00 | 1.82 |
3747 | 3995 | 5.820423 | TGTACTATGGCTGCGACAATTAATT | 59.180 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3748 | 3996 | 5.364778 | TGTACTATGGCTGCGACAATTAAT | 58.635 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
3749 | 3997 | 4.760878 | TGTACTATGGCTGCGACAATTAA | 58.239 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
3750 | 3998 | 4.394439 | TGTACTATGGCTGCGACAATTA | 57.606 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
3751 | 3999 | 3.260475 | TGTACTATGGCTGCGACAATT | 57.740 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
3752 | 4000 | 2.979814 | TGTACTATGGCTGCGACAAT | 57.020 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3753 | 4001 | 2.753055 | TTGTACTATGGCTGCGACAA | 57.247 | 45.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3754 | 4002 | 2.979814 | ATTGTACTATGGCTGCGACA | 57.020 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3755 | 4003 | 4.142687 | ACAAAATTGTACTATGGCTGCGAC | 60.143 | 41.667 | 0.00 | 0.00 | 40.16 | 5.19 |
3756 | 4004 | 4.006989 | ACAAAATTGTACTATGGCTGCGA | 58.993 | 39.130 | 0.00 | 0.00 | 40.16 | 5.10 |
3757 | 4005 | 4.355543 | ACAAAATTGTACTATGGCTGCG | 57.644 | 40.909 | 0.00 | 0.00 | 40.16 | 5.18 |
3758 | 4006 | 8.702163 | ATTTTACAAAATTGTACTATGGCTGC | 57.298 | 30.769 | 5.53 | 0.00 | 42.84 | 5.25 |
3785 | 4033 | 9.768215 | TTCCAGATACTCCCTTTAATTCAAATT | 57.232 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
3786 | 4034 | 9.942526 | ATTCCAGATACTCCCTTTAATTCAAAT | 57.057 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
3856 | 4105 | 5.931724 | CCCCATTTTACTTGGATTTGTTGAC | 59.068 | 40.000 | 0.00 | 0.00 | 36.26 | 3.18 |
3908 | 4157 | 3.173953 | TGGGGACTTGATCATTTGCTT | 57.826 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
3952 | 4201 | 1.441311 | CCCCGCATTATTTGGGCAC | 59.559 | 57.895 | 0.00 | 0.00 | 41.88 | 5.01 |
3953 | 4202 | 3.947173 | CCCCGCATTATTTGGGCA | 58.053 | 55.556 | 0.00 | 0.00 | 41.88 | 5.36 |
3955 | 4204 | 0.539051 | TTTGCCCCGCATTATTTGGG | 59.461 | 50.000 | 0.00 | 0.00 | 38.76 | 4.12 |
3956 | 4205 | 2.158986 | TCATTTGCCCCGCATTATTTGG | 60.159 | 45.455 | 0.00 | 0.00 | 38.76 | 3.28 |
3957 | 4206 | 3.176552 | TCATTTGCCCCGCATTATTTG | 57.823 | 42.857 | 0.00 | 0.00 | 38.76 | 2.32 |
3958 | 4207 | 3.552684 | CGATCATTTGCCCCGCATTATTT | 60.553 | 43.478 | 0.00 | 0.00 | 38.76 | 1.40 |
3959 | 4208 | 2.030007 | CGATCATTTGCCCCGCATTATT | 60.030 | 45.455 | 0.00 | 0.00 | 38.76 | 1.40 |
3960 | 4209 | 1.541147 | CGATCATTTGCCCCGCATTAT | 59.459 | 47.619 | 0.00 | 0.00 | 38.76 | 1.28 |
3961 | 4210 | 0.950836 | CGATCATTTGCCCCGCATTA | 59.049 | 50.000 | 0.00 | 0.00 | 38.76 | 1.90 |
3962 | 4211 | 0.751277 | TCGATCATTTGCCCCGCATT | 60.751 | 50.000 | 0.00 | 0.00 | 38.76 | 3.56 |
3963 | 4212 | 0.751277 | TTCGATCATTTGCCCCGCAT | 60.751 | 50.000 | 0.00 | 0.00 | 38.76 | 4.73 |
3964 | 4213 | 0.751277 | ATTCGATCATTTGCCCCGCA | 60.751 | 50.000 | 0.00 | 0.00 | 36.47 | 5.69 |
3965 | 4214 | 0.040067 | GATTCGATCATTTGCCCCGC | 60.040 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
3966 | 4215 | 1.532868 | GAGATTCGATCATTTGCCCCG | 59.467 | 52.381 | 0.00 | 0.00 | 0.00 | 5.73 |
3967 | 4216 | 1.882623 | GGAGATTCGATCATTTGCCCC | 59.117 | 52.381 | 0.00 | 0.00 | 0.00 | 5.80 |
3968 | 4217 | 1.882623 | GGGAGATTCGATCATTTGCCC | 59.117 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.