Multiple sequence alignment - TraesCS5B01G502600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G502600 | chr5B | 100.000 | 4717 | 0 | 0 | 1 | 4717 | 669669244 | 669673960 | 0.000000e+00 | 8711.0 |
1 | TraesCS5B01G502600 | chr5B | 91.358 | 81 | 7 | 0 | 2607 | 2687 | 669671940 | 669672020 | 1.390000e-20 | 111.0 |
2 | TraesCS5B01G502600 | chr5D | 87.657 | 1669 | 131 | 34 | 2364 | 3988 | 530426393 | 530428030 | 0.000000e+00 | 1871.0 |
3 | TraesCS5B01G502600 | chr5D | 90.742 | 1199 | 80 | 14 | 761 | 1942 | 530424481 | 530425665 | 0.000000e+00 | 1570.0 |
4 | TraesCS5B01G502600 | chr5D | 83.962 | 424 | 56 | 10 | 1950 | 2364 | 530425905 | 530426325 | 3.420000e-106 | 396.0 |
5 | TraesCS5B01G502600 | chr5D | 96.429 | 112 | 3 | 1 | 4601 | 4711 | 530428482 | 530428593 | 2.900000e-42 | 183.0 |
6 | TraesCS5B01G502600 | chr5D | 94.048 | 84 | 5 | 0 | 2697 | 2780 | 530426636 | 530426719 | 1.380000e-25 | 128.0 |
7 | TraesCS5B01G502600 | chr5D | 91.566 | 83 | 7 | 0 | 2605 | 2687 | 530426724 | 530426806 | 1.070000e-21 | 115.0 |
8 | TraesCS5B01G502600 | chr2B | 88.396 | 1465 | 115 | 27 | 2380 | 3811 | 141563061 | 141564503 | 0.000000e+00 | 1712.0 |
9 | TraesCS5B01G502600 | chr2B | 89.066 | 1317 | 98 | 25 | 794 | 2094 | 141559099 | 141560385 | 0.000000e+00 | 1592.0 |
10 | TraesCS5B01G502600 | chr2B | 90.873 | 504 | 41 | 3 | 3611 | 4112 | 141564402 | 141564902 | 0.000000e+00 | 671.0 |
11 | TraesCS5B01G502600 | chr2B | 87.923 | 207 | 23 | 2 | 4229 | 4434 | 141564906 | 141565111 | 4.720000e-60 | 243.0 |
12 | TraesCS5B01G502600 | chr2B | 92.683 | 82 | 6 | 0 | 2606 | 2687 | 141563378 | 141563459 | 8.290000e-23 | 119.0 |
13 | TraesCS5B01G502600 | chr2B | 82.927 | 82 | 13 | 1 | 1608 | 1689 | 141563375 | 141563455 | 6.550000e-09 | 73.1 |
14 | TraesCS5B01G502600 | chr2B | 93.617 | 47 | 3 | 0 | 621 | 667 | 770578483 | 770578437 | 2.350000e-08 | 71.3 |
15 | TraesCS5B01G502600 | chr2A | 89.362 | 1316 | 92 | 26 | 794 | 2094 | 88661936 | 88663218 | 0.000000e+00 | 1611.0 |
16 | TraesCS5B01G502600 | chr2A | 87.288 | 944 | 82 | 16 | 2882 | 3811 | 88670294 | 88671213 | 0.000000e+00 | 1044.0 |
17 | TraesCS5B01G502600 | chr2A | 90.365 | 602 | 55 | 3 | 2 | 602 | 38589376 | 38589975 | 0.000000e+00 | 787.0 |
18 | TraesCS5B01G502600 | chr2A | 91.535 | 508 | 36 | 6 | 97 | 601 | 38349222 | 38348719 | 0.000000e+00 | 693.0 |
19 | TraesCS5B01G502600 | chr2A | 91.287 | 505 | 39 | 3 | 3611 | 4113 | 88671112 | 88671613 | 0.000000e+00 | 684.0 |
20 | TraesCS5B01G502600 | chr2A | 90.304 | 526 | 39 | 7 | 2364 | 2877 | 88669449 | 88669974 | 0.000000e+00 | 678.0 |
21 | TraesCS5B01G502600 | chr2A | 87.956 | 274 | 28 | 4 | 2094 | 2364 | 88669111 | 88669382 | 7.620000e-83 | 318.0 |
22 | TraesCS5B01G502600 | chr2A | 86.842 | 266 | 13 | 11 | 4456 | 4709 | 88671704 | 88671959 | 1.290000e-70 | 278.0 |
23 | TraesCS5B01G502600 | chr2A | 91.667 | 84 | 7 | 0 | 2697 | 2780 | 88669692 | 88669775 | 2.980000e-22 | 117.0 |
24 | TraesCS5B01G502600 | chr2A | 82.143 | 84 | 10 | 4 | 1608 | 1689 | 88669778 | 88669858 | 3.050000e-07 | 67.6 |
25 | TraesCS5B01G502600 | chr2A | 97.368 | 38 | 1 | 0 | 4433 | 4470 | 88671655 | 88671692 | 1.100000e-06 | 65.8 |
26 | TraesCS5B01G502600 | chr2D | 88.813 | 1314 | 82 | 34 | 794 | 2094 | 88287893 | 88289154 | 0.000000e+00 | 1552.0 |
27 | TraesCS5B01G502600 | chr2D | 88.268 | 912 | 76 | 16 | 2439 | 3334 | 88290446 | 88291342 | 0.000000e+00 | 1062.0 |
28 | TraesCS5B01G502600 | chr2D | 89.109 | 505 | 41 | 6 | 3611 | 4113 | 88293936 | 88294428 | 2.410000e-172 | 616.0 |
29 | TraesCS5B01G502600 | chr2D | 89.293 | 495 | 37 | 7 | 3328 | 3811 | 88293548 | 88294037 | 1.450000e-169 | 606.0 |
30 | TraesCS5B01G502600 | chr2D | 93.040 | 273 | 14 | 2 | 4425 | 4692 | 88301293 | 88301565 | 1.230000e-105 | 394.0 |
31 | TraesCS5B01G502600 | chr2D | 89.231 | 195 | 19 | 2 | 4241 | 4434 | 88298403 | 88298596 | 4.720000e-60 | 243.0 |
32 | TraesCS5B01G502600 | chr2D | 91.860 | 86 | 7 | 0 | 2695 | 2780 | 88290612 | 88290697 | 2.310000e-23 | 121.0 |
33 | TraesCS5B01G502600 | chr5A | 90.143 | 1116 | 63 | 19 | 695 | 1778 | 658670130 | 658671230 | 0.000000e+00 | 1408.0 |
34 | TraesCS5B01G502600 | chr5A | 88.022 | 1102 | 71 | 30 | 2364 | 3435 | 658671962 | 658673032 | 0.000000e+00 | 1247.0 |
35 | TraesCS5B01G502600 | chr5A | 86.389 | 529 | 44 | 13 | 3482 | 3995 | 658673028 | 658673543 | 1.920000e-153 | 553.0 |
36 | TraesCS5B01G502600 | chr5A | 83.491 | 424 | 58 | 10 | 1950 | 2364 | 658671474 | 658671894 | 7.400000e-103 | 385.0 |
37 | TraesCS5B01G502600 | chr5A | 92.929 | 99 | 7 | 0 | 3611 | 3709 | 658673267 | 658673365 | 1.370000e-30 | 145.0 |
38 | TraesCS5B01G502600 | chr5A | 88.983 | 118 | 9 | 3 | 4601 | 4714 | 658673845 | 658673962 | 4.920000e-30 | 143.0 |
39 | TraesCS5B01G502600 | chr5A | 90.099 | 101 | 10 | 0 | 3711 | 3811 | 658673169 | 658673269 | 1.070000e-26 | 132.0 |
40 | TraesCS5B01G502600 | chr5A | 94.048 | 84 | 5 | 0 | 2697 | 2780 | 658672205 | 658672288 | 1.380000e-25 | 128.0 |
41 | TraesCS5B01G502600 | chr5A | 91.566 | 83 | 7 | 0 | 2605 | 2687 | 658672293 | 658672375 | 1.070000e-21 | 115.0 |
42 | TraesCS5B01G502600 | chr7B | 95.854 | 603 | 24 | 1 | 1 | 603 | 86206043 | 86205442 | 0.000000e+00 | 974.0 |
43 | TraesCS5B01G502600 | chr1B | 93.656 | 599 | 37 | 1 | 3 | 601 | 623382053 | 623381456 | 0.000000e+00 | 894.0 |
44 | TraesCS5B01G502600 | chr1B | 92.857 | 602 | 42 | 1 | 3 | 604 | 667384761 | 667385361 | 0.000000e+00 | 872.0 |
45 | TraesCS5B01G502600 | chr3A | 89.221 | 603 | 59 | 5 | 1 | 602 | 30550547 | 30551144 | 0.000000e+00 | 749.0 |
46 | TraesCS5B01G502600 | chr3A | 88.147 | 599 | 70 | 1 | 2 | 600 | 744453378 | 744452781 | 0.000000e+00 | 712.0 |
47 | TraesCS5B01G502600 | chr3A | 82.516 | 469 | 41 | 21 | 2807 | 3252 | 637283460 | 637283910 | 1.600000e-99 | 374.0 |
48 | TraesCS5B01G502600 | chr3A | 83.831 | 402 | 43 | 7 | 2421 | 2801 | 637282952 | 637283352 | 3.470000e-96 | 363.0 |
49 | TraesCS5B01G502600 | chr7D | 85.284 | 598 | 78 | 7 | 3 | 599 | 545023403 | 545023991 | 4.040000e-170 | 608.0 |
50 | TraesCS5B01G502600 | chr7D | 83.333 | 96 | 4 | 7 | 2930 | 3024 | 178153881 | 178153965 | 1.410000e-10 | 78.7 |
51 | TraesCS5B01G502600 | chr4A | 83.139 | 599 | 95 | 5 | 2 | 599 | 544897839 | 544898432 | 4.150000e-150 | 542.0 |
52 | TraesCS5B01G502600 | chr3D | 81.391 | 532 | 51 | 16 | 2421 | 2906 | 497491474 | 497490945 | 1.590000e-104 | 390.0 |
53 | TraesCS5B01G502600 | chr3D | 82.955 | 352 | 33 | 11 | 2919 | 3263 | 497381971 | 497381640 | 4.620000e-75 | 292.0 |
54 | TraesCS5B01G502600 | chr3B | 81.448 | 221 | 18 | 11 | 2946 | 3160 | 657539470 | 657539267 | 4.890000e-35 | 159.0 |
55 | TraesCS5B01G502600 | chr3B | 91.892 | 74 | 6 | 0 | 2421 | 2494 | 657541282 | 657541209 | 2.320000e-18 | 104.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G502600 | chr5B | 669669244 | 669673960 | 4716 | False | 4411.000000 | 8711 | 95.679000 | 1 | 4717 | 2 | chr5B.!!$F1 | 4716 |
1 | TraesCS5B01G502600 | chr5D | 530424481 | 530428593 | 4112 | False | 710.500000 | 1871 | 90.734000 | 761 | 4711 | 6 | chr5D.!!$F1 | 3950 |
2 | TraesCS5B01G502600 | chr2B | 141559099 | 141565111 | 6012 | False | 735.016667 | 1712 | 88.644667 | 794 | 4434 | 6 | chr2B.!!$F1 | 3640 |
3 | TraesCS5B01G502600 | chr2A | 88661936 | 88663218 | 1282 | False | 1611.000000 | 1611 | 89.362000 | 794 | 2094 | 1 | chr2A.!!$F2 | 1300 |
4 | TraesCS5B01G502600 | chr2A | 38589376 | 38589975 | 599 | False | 787.000000 | 787 | 90.365000 | 2 | 602 | 1 | chr2A.!!$F1 | 600 |
5 | TraesCS5B01G502600 | chr2A | 38348719 | 38349222 | 503 | True | 693.000000 | 693 | 91.535000 | 97 | 601 | 1 | chr2A.!!$R1 | 504 |
6 | TraesCS5B01G502600 | chr2A | 88669111 | 88671959 | 2848 | False | 406.550000 | 1044 | 89.356875 | 1608 | 4709 | 8 | chr2A.!!$F3 | 3101 |
7 | TraesCS5B01G502600 | chr2D | 88287893 | 88301565 | 13672 | False | 656.285714 | 1552 | 89.944857 | 794 | 4692 | 7 | chr2D.!!$F1 | 3898 |
8 | TraesCS5B01G502600 | chr5A | 658670130 | 658673962 | 3832 | False | 472.888889 | 1408 | 89.518889 | 695 | 4714 | 9 | chr5A.!!$F1 | 4019 |
9 | TraesCS5B01G502600 | chr7B | 86205442 | 86206043 | 601 | True | 974.000000 | 974 | 95.854000 | 1 | 603 | 1 | chr7B.!!$R1 | 602 |
10 | TraesCS5B01G502600 | chr1B | 623381456 | 623382053 | 597 | True | 894.000000 | 894 | 93.656000 | 3 | 601 | 1 | chr1B.!!$R1 | 598 |
11 | TraesCS5B01G502600 | chr1B | 667384761 | 667385361 | 600 | False | 872.000000 | 872 | 92.857000 | 3 | 604 | 1 | chr1B.!!$F1 | 601 |
12 | TraesCS5B01G502600 | chr3A | 30550547 | 30551144 | 597 | False | 749.000000 | 749 | 89.221000 | 1 | 602 | 1 | chr3A.!!$F1 | 601 |
13 | TraesCS5B01G502600 | chr3A | 744452781 | 744453378 | 597 | True | 712.000000 | 712 | 88.147000 | 2 | 600 | 1 | chr3A.!!$R1 | 598 |
14 | TraesCS5B01G502600 | chr3A | 637282952 | 637283910 | 958 | False | 368.500000 | 374 | 83.173500 | 2421 | 3252 | 2 | chr3A.!!$F2 | 831 |
15 | TraesCS5B01G502600 | chr7D | 545023403 | 545023991 | 588 | False | 608.000000 | 608 | 85.284000 | 3 | 599 | 1 | chr7D.!!$F2 | 596 |
16 | TraesCS5B01G502600 | chr4A | 544897839 | 544898432 | 593 | False | 542.000000 | 542 | 83.139000 | 2 | 599 | 1 | chr4A.!!$F1 | 597 |
17 | TraesCS5B01G502600 | chr3D | 497490945 | 497491474 | 529 | True | 390.000000 | 390 | 81.391000 | 2421 | 2906 | 1 | chr3D.!!$R2 | 485 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
900 | 909 | 0.106719 | TCCAAATCTCCCAATCCGCC | 60.107 | 55.000 | 0.0 | 0.0 | 0.00 | 6.13 | F |
946 | 972 | 0.544595 | ACCGCTTGTTCCCTCTAGGT | 60.545 | 55.000 | 0.0 | 0.0 | 36.75 | 3.08 | F |
1248 | 1293 | 0.673644 | ACGGATTTCGCAGGGAAGTG | 60.674 | 55.000 | 0.0 | 0.0 | 43.89 | 3.16 | F |
2483 | 5320 | 1.003580 | ACTGAACCGTCATGATTGCCT | 59.996 | 47.619 | 0.0 | 0.0 | 31.85 | 4.75 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1804 | 1854 | 0.233332 | GCAATATCCTTCGCGCTCAC | 59.767 | 55.0 | 5.56 | 0.0 | 0.00 | 3.51 | R |
2571 | 5421 | 1.697082 | TTTGTGGACCACGGTGCCTA | 61.697 | 55.0 | 19.67 | 0.0 | 37.14 | 3.93 | R |
3187 | 6497 | 2.424956 | GCCCAAAGCAACAATCTCTAGG | 59.575 | 50.0 | 0.00 | 0.0 | 42.97 | 3.02 | R |
3866 | 9507 | 0.320697 | CCGTTCTTCCCCTCTTCGTT | 59.679 | 55.0 | 0.00 | 0.0 | 0.00 | 3.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
43 | 44 | 3.437795 | GAGCCATGTTGCTGCGCT | 61.438 | 61.111 | 9.73 | 0.00 | 42.95 | 5.92 |
123 | 124 | 2.093075 | TGGGTCAAGTTAAACACGGACA | 60.093 | 45.455 | 0.00 | 0.00 | 36.70 | 4.02 |
264 | 265 | 3.443045 | GTGCGTGCATGGAAGGGG | 61.443 | 66.667 | 8.27 | 0.00 | 0.00 | 4.79 |
351 | 352 | 1.490490 | AGATTATTCAGGCGCAAGGGA | 59.510 | 47.619 | 10.83 | 0.00 | 38.28 | 4.20 |
403 | 404 | 7.813148 | CGTAAGAGAGATTCAGTACCTTTTGAA | 59.187 | 37.037 | 0.00 | 0.00 | 43.02 | 2.69 |
454 | 455 | 7.094075 | TGCTAGTCGTTCTCAGAATAAGGTTAA | 60.094 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
515 | 516 | 2.065899 | TGACTTGGTTTGGTTCTGGG | 57.934 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
559 | 560 | 3.316308 | AGCCCTCGATGATTGTAATTTGC | 59.684 | 43.478 | 0.00 | 0.00 | 0.00 | 3.68 |
589 | 590 | 8.880991 | TTCTGAGTAATACAAGTCTTCTACCT | 57.119 | 34.615 | 0.00 | 0.00 | 0.00 | 3.08 |
619 | 620 | 4.789012 | AAAAAGTATGTGGCAGTCCATG | 57.211 | 40.909 | 0.00 | 0.00 | 45.62 | 3.66 |
620 | 621 | 3.439857 | AAAGTATGTGGCAGTCCATGT | 57.560 | 42.857 | 0.00 | 0.00 | 45.62 | 3.21 |
621 | 622 | 2.408271 | AGTATGTGGCAGTCCATGTG | 57.592 | 50.000 | 0.00 | 0.00 | 45.62 | 3.21 |
622 | 623 | 1.908619 | AGTATGTGGCAGTCCATGTGA | 59.091 | 47.619 | 0.00 | 0.00 | 45.62 | 3.58 |
623 | 624 | 2.305635 | AGTATGTGGCAGTCCATGTGAA | 59.694 | 45.455 | 0.00 | 0.00 | 45.62 | 3.18 |
624 | 625 | 2.291209 | ATGTGGCAGTCCATGTGAAA | 57.709 | 45.000 | 0.00 | 0.00 | 45.62 | 2.69 |
625 | 626 | 2.291209 | TGTGGCAGTCCATGTGAAAT | 57.709 | 45.000 | 0.00 | 0.00 | 45.62 | 2.17 |
626 | 627 | 2.161855 | TGTGGCAGTCCATGTGAAATC | 58.838 | 47.619 | 0.00 | 0.00 | 45.62 | 2.17 |
627 | 628 | 2.224843 | TGTGGCAGTCCATGTGAAATCT | 60.225 | 45.455 | 0.00 | 0.00 | 45.62 | 2.40 |
628 | 629 | 2.821969 | GTGGCAGTCCATGTGAAATCTT | 59.178 | 45.455 | 0.00 | 0.00 | 45.62 | 2.40 |
629 | 630 | 3.256631 | GTGGCAGTCCATGTGAAATCTTT | 59.743 | 43.478 | 0.00 | 0.00 | 45.62 | 2.52 |
630 | 631 | 4.458989 | GTGGCAGTCCATGTGAAATCTTTA | 59.541 | 41.667 | 0.00 | 0.00 | 45.62 | 1.85 |
631 | 632 | 5.048083 | GTGGCAGTCCATGTGAAATCTTTAA | 60.048 | 40.000 | 0.00 | 0.00 | 45.62 | 1.52 |
632 | 633 | 5.538053 | TGGCAGTCCATGTGAAATCTTTAAA | 59.462 | 36.000 | 0.00 | 0.00 | 37.47 | 1.52 |
633 | 634 | 6.041409 | TGGCAGTCCATGTGAAATCTTTAAAA | 59.959 | 34.615 | 0.00 | 0.00 | 37.47 | 1.52 |
634 | 635 | 6.928492 | GGCAGTCCATGTGAAATCTTTAAAAA | 59.072 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
668 | 669 | 9.886132 | ATTTAGAAACGGAGAAAGTACATATGT | 57.114 | 29.630 | 13.93 | 13.93 | 0.00 | 2.29 |
669 | 670 | 8.697846 | TTAGAAACGGAGAAAGTACATATGTG | 57.302 | 34.615 | 18.81 | 0.64 | 0.00 | 3.21 |
670 | 671 | 6.106673 | AGAAACGGAGAAAGTACATATGTGG | 58.893 | 40.000 | 18.81 | 0.00 | 0.00 | 4.17 |
671 | 672 | 5.416271 | AACGGAGAAAGTACATATGTGGT | 57.584 | 39.130 | 18.81 | 2.24 | 0.00 | 4.16 |
672 | 673 | 4.755411 | ACGGAGAAAGTACATATGTGGTG | 58.245 | 43.478 | 18.81 | 1.05 | 0.00 | 4.17 |
673 | 674 | 4.464951 | ACGGAGAAAGTACATATGTGGTGA | 59.535 | 41.667 | 18.81 | 0.00 | 0.00 | 4.02 |
674 | 675 | 5.128827 | ACGGAGAAAGTACATATGTGGTGAT | 59.871 | 40.000 | 18.81 | 0.90 | 0.00 | 3.06 |
675 | 676 | 5.692204 | CGGAGAAAGTACATATGTGGTGATC | 59.308 | 44.000 | 18.81 | 9.84 | 0.00 | 2.92 |
676 | 677 | 6.461648 | CGGAGAAAGTACATATGTGGTGATCT | 60.462 | 42.308 | 18.81 | 13.96 | 0.00 | 2.75 |
677 | 678 | 6.926272 | GGAGAAAGTACATATGTGGTGATCTC | 59.074 | 42.308 | 18.81 | 19.98 | 0.00 | 2.75 |
678 | 679 | 7.201956 | GGAGAAAGTACATATGTGGTGATCTCT | 60.202 | 40.741 | 18.81 | 10.16 | 0.00 | 3.10 |
679 | 680 | 8.083828 | AGAAAGTACATATGTGGTGATCTCTT | 57.916 | 34.615 | 18.81 | 6.97 | 0.00 | 2.85 |
680 | 681 | 7.984050 | AGAAAGTACATATGTGGTGATCTCTTG | 59.016 | 37.037 | 18.81 | 0.00 | 0.00 | 3.02 |
681 | 682 | 6.798427 | AGTACATATGTGGTGATCTCTTGT | 57.202 | 37.500 | 18.81 | 0.00 | 0.00 | 3.16 |
682 | 683 | 7.898014 | AGTACATATGTGGTGATCTCTTGTA | 57.102 | 36.000 | 18.81 | 0.00 | 0.00 | 2.41 |
683 | 684 | 7.717568 | AGTACATATGTGGTGATCTCTTGTAC | 58.282 | 38.462 | 18.81 | 3.27 | 37.97 | 2.90 |
684 | 685 | 6.798427 | ACATATGTGGTGATCTCTTGTACT | 57.202 | 37.500 | 7.78 | 0.00 | 0.00 | 2.73 |
685 | 686 | 7.898014 | ACATATGTGGTGATCTCTTGTACTA | 57.102 | 36.000 | 7.78 | 0.00 | 0.00 | 1.82 |
686 | 687 | 7.946207 | ACATATGTGGTGATCTCTTGTACTAG | 58.054 | 38.462 | 7.78 | 0.00 | 0.00 | 2.57 |
687 | 688 | 7.561722 | ACATATGTGGTGATCTCTTGTACTAGT | 59.438 | 37.037 | 7.78 | 0.00 | 0.00 | 2.57 |
688 | 689 | 5.899120 | TGTGGTGATCTCTTGTACTAGTC | 57.101 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
689 | 690 | 5.571285 | TGTGGTGATCTCTTGTACTAGTCT | 58.429 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
690 | 691 | 6.010850 | TGTGGTGATCTCTTGTACTAGTCTT | 58.989 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
691 | 692 | 6.493802 | TGTGGTGATCTCTTGTACTAGTCTTT | 59.506 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
692 | 693 | 7.015292 | TGTGGTGATCTCTTGTACTAGTCTTTT | 59.985 | 37.037 | 0.00 | 0.00 | 0.00 | 2.27 |
693 | 694 | 7.542824 | GTGGTGATCTCTTGTACTAGTCTTTTC | 59.457 | 40.741 | 0.00 | 0.00 | 0.00 | 2.29 |
716 | 717 | 1.272258 | CCCCTTGGGTTATGGAACGTT | 60.272 | 52.381 | 0.00 | 0.00 | 38.25 | 3.99 |
718 | 719 | 1.735571 | CCTTGGGTTATGGAACGTTCG | 59.264 | 52.381 | 21.34 | 4.08 | 36.32 | 3.95 |
722 | 723 | 3.677190 | TGGGTTATGGAACGTTCGAAAT | 58.323 | 40.909 | 21.34 | 16.29 | 36.32 | 2.17 |
726 | 727 | 5.446875 | GGGTTATGGAACGTTCGAAATTCTC | 60.447 | 44.000 | 21.34 | 6.13 | 36.32 | 2.87 |
727 | 728 | 5.723135 | GGTTATGGAACGTTCGAAATTCTCG | 60.723 | 44.000 | 21.34 | 11.96 | 41.71 | 4.04 |
737 | 739 | 2.433436 | CGAAATTCTCGTTCCCCCTTT | 58.567 | 47.619 | 0.00 | 0.00 | 42.89 | 3.11 |
744 | 746 | 1.350019 | CTCGTTCCCCCTTTGGTTAGT | 59.650 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
822 | 825 | 2.363361 | CACCCTAGGACCGACCCT | 59.637 | 66.667 | 11.48 | 1.34 | 40.05 | 4.34 |
851 | 855 | 2.570302 | TGGACTAGCCAAGAACCCTAAC | 59.430 | 50.000 | 3.71 | 0.00 | 45.87 | 2.34 |
852 | 856 | 2.093075 | GGACTAGCCAAGAACCCTAACC | 60.093 | 54.545 | 0.00 | 0.00 | 36.34 | 2.85 |
853 | 857 | 1.914108 | ACTAGCCAAGAACCCTAACCC | 59.086 | 52.381 | 0.00 | 0.00 | 0.00 | 4.11 |
854 | 858 | 1.212195 | CTAGCCAAGAACCCTAACCCC | 59.788 | 57.143 | 0.00 | 0.00 | 0.00 | 4.95 |
900 | 909 | 0.106719 | TCCAAATCTCCCAATCCGCC | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
918 | 927 | 1.095807 | CCGCCCCTTCGAGAAATTCC | 61.096 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
946 | 972 | 0.544595 | ACCGCTTGTTCCCTCTAGGT | 60.545 | 55.000 | 0.00 | 0.00 | 36.75 | 3.08 |
1170 | 1214 | 4.856607 | CTCCTCGCCGTCTTCGCC | 62.857 | 72.222 | 0.00 | 0.00 | 35.54 | 5.54 |
1213 | 1258 | 1.595357 | CCGACCTACCTTTTCCGCT | 59.405 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
1222 | 1267 | 2.357760 | TTTTCCGCTCGTTCCCCG | 60.358 | 61.111 | 0.00 | 0.00 | 38.13 | 5.73 |
1248 | 1293 | 0.673644 | ACGGATTTCGCAGGGAAGTG | 60.674 | 55.000 | 0.00 | 0.00 | 43.89 | 3.16 |
1471 | 1517 | 7.201384 | GCTTTGCTGAAGTGCTAATATTTGTTC | 60.201 | 37.037 | 0.00 | 0.00 | 37.69 | 3.18 |
1487 | 1533 | 2.019951 | TTCCGCTTCGTCTTCGTGC | 61.020 | 57.895 | 0.00 | 0.00 | 38.33 | 5.34 |
1511 | 1557 | 3.713288 | CCGCGTAGATAACTTGAATGGA | 58.287 | 45.455 | 4.92 | 0.00 | 0.00 | 3.41 |
1532 | 1578 | 3.193782 | AGCTAAGGTTCTTGGGAGGATT | 58.806 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
1571 | 1617 | 5.365605 | TGTGGAGAAGTACAAGAAGAAGGAA | 59.634 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1575 | 1621 | 6.209788 | GGAGAAGTACAAGAAGAAGGAAGAGA | 59.790 | 42.308 | 0.00 | 0.00 | 0.00 | 3.10 |
1584 | 1630 | 3.443145 | AGAAGGAAGAGAAGGACGAGA | 57.557 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
1694 | 1740 | 6.364568 | TCCCATGATGAACAGGTATCTATG | 57.635 | 41.667 | 0.00 | 0.00 | 0.00 | 2.23 |
1696 | 1742 | 4.940046 | CCATGATGAACAGGTATCTATGCC | 59.060 | 45.833 | 0.00 | 0.00 | 0.00 | 4.40 |
1699 | 1745 | 1.070134 | TGAACAGGTATCTATGCCGCC | 59.930 | 52.381 | 0.00 | 0.00 | 37.65 | 6.13 |
1712 | 1758 | 1.153765 | GCCGCCTCTGCAATTTTCC | 60.154 | 57.895 | 0.00 | 0.00 | 37.32 | 3.13 |
1717 | 1763 | 3.328505 | CGCCTCTGCAATTTTCCAATTT | 58.671 | 40.909 | 0.00 | 0.00 | 37.32 | 1.82 |
1754 | 1804 | 7.426606 | TGCTAGGAATACACACAACCTATTA | 57.573 | 36.000 | 0.00 | 0.00 | 33.60 | 0.98 |
1777 | 1827 | 4.517285 | ACCATCGTGCTCATAGTGATTTT | 58.483 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
1778 | 1828 | 4.572389 | ACCATCGTGCTCATAGTGATTTTC | 59.428 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
1803 | 1853 | 6.924060 | CACCGGAGATGTTTTCTAACTATAGG | 59.076 | 42.308 | 9.46 | 0.00 | 33.74 | 2.57 |
1804 | 1854 | 6.041751 | ACCGGAGATGTTTTCTAACTATAGGG | 59.958 | 42.308 | 9.46 | 0.00 | 33.74 | 3.53 |
1813 | 1863 | 1.878088 | CTAACTATAGGGTGAGCGCGA | 59.122 | 52.381 | 12.10 | 0.00 | 0.00 | 5.87 |
1868 | 1918 | 9.905713 | ATTAGTTTCTAGCCAGTTGATTATTCA | 57.094 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
1877 | 1927 | 8.773033 | AGCCAGTTGATTATTCATTAGGAATT | 57.227 | 30.769 | 0.00 | 0.00 | 43.76 | 2.17 |
1879 | 1929 | 8.854117 | GCCAGTTGATTATTCATTAGGAATTCT | 58.146 | 33.333 | 5.23 | 0.00 | 43.76 | 2.40 |
1902 | 1952 | 4.034285 | ACAAGCAATTAACTACCTGGCT | 57.966 | 40.909 | 0.00 | 0.00 | 0.00 | 4.75 |
1935 | 1985 | 2.268076 | ACTGCATTGGTCCAACCGC | 61.268 | 57.895 | 17.35 | 17.35 | 42.58 | 5.68 |
1942 | 1992 | 2.203437 | GGTCCAACCGCCCAAGTT | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 2.66 |
1943 | 1993 | 1.073548 | GGTCCAACCGCCCAAGTTA | 59.926 | 57.895 | 0.00 | 0.00 | 0.00 | 2.24 |
1946 | 1996 | 2.618559 | GGTCCAACCGCCCAAGTTATTA | 60.619 | 50.000 | 0.00 | 0.00 | 0.00 | 0.98 |
1958 | 2251 | 8.356657 | CCGCCCAAGTTATTATTTGATTATTCA | 58.643 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2014 | 2307 | 5.233050 | CCTCATAGTAATTTGCACGAGTGAG | 59.767 | 44.000 | 7.50 | 0.00 | 0.00 | 3.51 |
2021 | 2314 | 3.414549 | TTTGCACGAGTGAGGTTTTTC | 57.585 | 42.857 | 7.50 | 0.00 | 0.00 | 2.29 |
2030 | 2323 | 4.065789 | GAGTGAGGTTTTTCCACTACAGG | 58.934 | 47.826 | 0.00 | 0.00 | 40.80 | 4.00 |
2096 | 4859 | 6.012113 | AGTTCCTGACATTTCATTCCAATGA | 58.988 | 36.000 | 0.00 | 0.00 | 43.28 | 2.57 |
2133 | 4898 | 6.380846 | ACGGTCTGTGGTATAATTTACACCTA | 59.619 | 38.462 | 5.52 | 0.00 | 33.28 | 3.08 |
2135 | 4900 | 6.698766 | GGTCTGTGGTATAATTTACACCTACG | 59.301 | 42.308 | 5.52 | 0.00 | 33.28 | 3.51 |
2139 | 4904 | 8.845413 | TGTGGTATAATTTACACCTACGTTTT | 57.155 | 30.769 | 5.52 | 0.00 | 33.28 | 2.43 |
2166 | 4931 | 6.939132 | AGATGAAGATATGCTGGAAACTTG | 57.061 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2186 | 4951 | 2.901192 | TGTACTTGCACAGTAAGGCCTA | 59.099 | 45.455 | 5.16 | 0.00 | 39.86 | 3.93 |
2187 | 4952 | 2.474410 | ACTTGCACAGTAAGGCCTAC | 57.526 | 50.000 | 5.16 | 4.84 | 31.97 | 3.18 |
2188 | 4953 | 1.978580 | ACTTGCACAGTAAGGCCTACT | 59.021 | 47.619 | 5.16 | 7.42 | 41.87 | 2.57 |
2223 | 4990 | 7.756722 | GGTCATCATTTTACTTCAGTCAAATGG | 59.243 | 37.037 | 19.50 | 9.84 | 43.98 | 3.16 |
2240 | 5008 | 6.098266 | GTCAAATGGCCTATTACCTTCCAAAT | 59.902 | 38.462 | 3.32 | 0.00 | 0.00 | 2.32 |
2241 | 5009 | 6.671779 | TCAAATGGCCTATTACCTTCCAAATT | 59.328 | 34.615 | 3.32 | 0.00 | 0.00 | 1.82 |
2299 | 5067 | 7.753132 | GGAATGAACAGTAATCGTTGCAAATAA | 59.247 | 33.333 | 0.00 | 0.00 | 35.13 | 1.40 |
2301 | 5069 | 8.673626 | ATGAACAGTAATCGTTGCAAATAAAG | 57.326 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
2315 | 5083 | 5.105023 | TGCAAATAAAGGCTCCATTTATGCA | 60.105 | 36.000 | 12.66 | 12.66 | 36.50 | 3.96 |
2316 | 5084 | 5.993441 | GCAAATAAAGGCTCCATTTATGCAT | 59.007 | 36.000 | 3.79 | 3.79 | 34.03 | 3.96 |
2319 | 5087 | 9.545105 | CAAATAAAGGCTCCATTTATGCATTTA | 57.455 | 29.630 | 3.54 | 6.52 | 43.54 | 1.40 |
2352 | 5120 | 8.491134 | TGTTCTAGGTTTGGTTACATGCTATAT | 58.509 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2418 | 5254 | 1.608801 | GGCTGGAAACATTTGCCCTTG | 60.609 | 52.381 | 0.00 | 0.00 | 41.93 | 3.61 |
2483 | 5320 | 1.003580 | ACTGAACCGTCATGATTGCCT | 59.996 | 47.619 | 0.00 | 0.00 | 31.85 | 4.75 |
2496 | 5333 | 7.217200 | GTCATGATTGCCTACTAATTCTGGTA | 58.783 | 38.462 | 0.00 | 0.00 | 0.00 | 3.25 |
2500 | 5337 | 6.929049 | TGATTGCCTACTAATTCTGGTATTCG | 59.071 | 38.462 | 0.00 | 0.00 | 0.00 | 3.34 |
2645 | 5503 | 1.159285 | CAGAAAGGCGAATGCAGTCA | 58.841 | 50.000 | 15.31 | 0.00 | 45.35 | 3.41 |
2667 | 5525 | 3.267812 | AGGGAGATTCCTGCAGATTTTCA | 59.732 | 43.478 | 17.39 | 0.00 | 36.57 | 2.69 |
2706 | 5564 | 4.007644 | CAGGGCTGTGGCGTCTGA | 62.008 | 66.667 | 0.00 | 0.00 | 40.32 | 3.27 |
2727 | 5585 | 1.909700 | ATGCTTTCCAGAAAGGCGAA | 58.090 | 45.000 | 19.05 | 1.38 | 45.85 | 4.70 |
2757 | 5615 | 1.399791 | GGAGCTTCCTGCAGATTTTCG | 59.600 | 52.381 | 17.39 | 0.00 | 45.94 | 3.46 |
2801 | 5742 | 2.954989 | TGCTTGTGCATTCACCAAGTAA | 59.045 | 40.909 | 13.60 | 2.86 | 45.31 | 2.24 |
2917 | 6197 | 6.095300 | TGAGTTGTTTATCATTTCGCCATGAT | 59.905 | 34.615 | 12.23 | 12.23 | 44.55 | 2.45 |
2929 | 6209 | 4.422073 | TCGCCATGATGTTCCTTTAGAT | 57.578 | 40.909 | 0.00 | 0.00 | 0.00 | 1.98 |
2981 | 6261 | 7.083858 | GTGATATGCTGAAAACTTGTGCTTAA | 58.916 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
2982 | 6262 | 7.061094 | GTGATATGCTGAAAACTTGTGCTTAAC | 59.939 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
2983 | 6263 | 4.981806 | TGCTGAAAACTTGTGCTTAACT | 57.018 | 36.364 | 0.00 | 0.00 | 0.00 | 2.24 |
2984 | 6264 | 4.671377 | TGCTGAAAACTTGTGCTTAACTG | 58.329 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2985 | 6265 | 3.487207 | GCTGAAAACTTGTGCTTAACTGC | 59.513 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
2986 | 6266 | 4.734695 | GCTGAAAACTTGTGCTTAACTGCT | 60.735 | 41.667 | 0.00 | 0.00 | 0.00 | 4.24 |
2987 | 6267 | 5.323371 | TGAAAACTTGTGCTTAACTGCTT | 57.677 | 34.783 | 0.00 | 0.00 | 0.00 | 3.91 |
2988 | 6268 | 6.443934 | TGAAAACTTGTGCTTAACTGCTTA | 57.556 | 33.333 | 0.00 | 0.00 | 0.00 | 3.09 |
3006 | 6286 | 6.001449 | TGCTTATCACAGTAAGGCCTTTAT | 57.999 | 37.500 | 26.08 | 10.05 | 33.31 | 1.40 |
3016 | 6296 | 5.471456 | CAGTAAGGCCTTTATATTGCTCTGG | 59.529 | 44.000 | 26.08 | 0.00 | 0.00 | 3.86 |
3017 | 6297 | 4.526438 | AAGGCCTTTATATTGCTCTGGT | 57.474 | 40.909 | 13.78 | 0.00 | 0.00 | 4.00 |
3018 | 6298 | 4.092116 | AGGCCTTTATATTGCTCTGGTC | 57.908 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
3019 | 6299 | 3.459598 | AGGCCTTTATATTGCTCTGGTCA | 59.540 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
3025 | 6316 | 7.445121 | CCTTTATATTGCTCTGGTCATGTCTA | 58.555 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
3050 | 6341 | 6.365970 | ACTTCACTTGGATGAGTCATTACT | 57.634 | 37.500 | 7.16 | 0.00 | 39.21 | 2.24 |
3078 | 6369 | 9.944663 | GCAAAATATATTTCATGAACTCCGTAA | 57.055 | 29.630 | 7.89 | 0.00 | 0.00 | 3.18 |
3106 | 6407 | 8.424918 | AGATATGTTGATTCGGAGTAACATTCT | 58.575 | 33.333 | 12.08 | 11.38 | 42.09 | 2.40 |
3114 | 6415 | 5.147330 | TCGGAGTAACATTCTCACATTGT | 57.853 | 39.130 | 0.00 | 0.00 | 34.04 | 2.71 |
3119 | 6420 | 6.820656 | GGAGTAACATTCTCACATTGTCAGAT | 59.179 | 38.462 | 0.00 | 0.00 | 34.04 | 2.90 |
3180 | 6490 | 6.799926 | TTTATTGCATTGCGCTAGATATGA | 57.200 | 33.333 | 9.73 | 0.00 | 43.06 | 2.15 |
3187 | 6497 | 5.005203 | GCATTGCGCTAGATATGACTGTATC | 59.995 | 44.000 | 9.73 | 0.00 | 37.77 | 2.24 |
3256 | 6566 | 5.733676 | TGCTACATGCTTCTCTGAATGTAA | 58.266 | 37.500 | 0.00 | 0.00 | 37.83 | 2.41 |
3257 | 6567 | 5.582269 | TGCTACATGCTTCTCTGAATGTAAC | 59.418 | 40.000 | 0.00 | 0.00 | 37.83 | 2.50 |
3312 | 6628 | 0.034186 | TCTATTGTTGCCTGGCTGGG | 60.034 | 55.000 | 21.03 | 2.60 | 36.00 | 4.45 |
3336 | 8863 | 7.228706 | GGGAATATGTGTCCTTTATACTTGGTG | 59.771 | 40.741 | 0.00 | 0.00 | 35.33 | 4.17 |
3360 | 8887 | 6.809689 | TGGTATAGTTCATCAGTAACGTTGTG | 59.190 | 38.462 | 11.99 | 8.59 | 32.00 | 3.33 |
3366 | 8893 | 2.588027 | TCAGTAACGTTGTGCAGTCA | 57.412 | 45.000 | 11.99 | 0.00 | 0.00 | 3.41 |
3516 | 9047 | 4.025813 | CACCAAAGAGCCACAAAAATTTCG | 60.026 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
3550 | 9081 | 1.753368 | GAAGAGGCGAGATCAGGGGG | 61.753 | 65.000 | 0.00 | 0.00 | 0.00 | 5.40 |
3552 | 9083 | 2.041265 | AGGCGAGATCAGGGGGTT | 59.959 | 61.111 | 0.00 | 0.00 | 0.00 | 4.11 |
3588 | 9130 | 1.481871 | TGTACAGGGACCGAGATTCC | 58.518 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3608 | 9150 | 2.902523 | CAGGTCAGAGACATGGTGATG | 58.097 | 52.381 | 4.06 | 0.00 | 40.11 | 3.07 |
3633 | 9175 | 5.057149 | AGACACAAAACATAGTGACAGGAC | 58.943 | 41.667 | 0.00 | 0.00 | 39.03 | 3.85 |
3673 | 9215 | 2.020720 | GAGAGATCAAGAGGCGACAGA | 58.979 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
3709 | 9251 | 3.196685 | ACAGGGGAAGAGAAGAAAGATCG | 59.803 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
3714 | 9256 | 4.141824 | GGGAAGAGAAGAAAGATCGGACAT | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
3724 | 9266 | 9.751542 | GAAGAAAGATCGGACATAAAAGATAGA | 57.248 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
3727 | 9269 | 9.921637 | GAAAGATCGGACATAAAAGATAGAGAT | 57.078 | 33.333 | 0.00 | 0.00 | 0.00 | 2.75 |
3737 | 9279 | 7.509659 | ACATAAAAGATAGAGATAGGAACGGGT | 59.490 | 37.037 | 0.00 | 0.00 | 0.00 | 5.28 |
3748 | 9290 | 1.133790 | AGGAACGGGTACGAGAAATCG | 59.866 | 52.381 | 0.00 | 0.00 | 44.60 | 3.34 |
3751 | 9293 | 1.590792 | CGGGTACGAGAAATCGCCC | 60.591 | 63.158 | 0.00 | 0.80 | 44.60 | 6.13 |
3758 | 9300 | 0.592754 | CGAGAAATCGCCCGAGAGAC | 60.593 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3771 | 9313 | 0.603569 | GAGAGACCAAGAGGCGACAA | 59.396 | 55.000 | 0.00 | 0.00 | 39.06 | 3.18 |
3866 | 9507 | 0.809385 | CCGTTACGAGAGAAGAGGCA | 59.191 | 55.000 | 6.24 | 0.00 | 0.00 | 4.75 |
3871 | 9512 | 0.959553 | ACGAGAGAAGAGGCAACGAA | 59.040 | 50.000 | 0.00 | 0.00 | 46.39 | 3.85 |
3872 | 9513 | 1.068194 | ACGAGAGAAGAGGCAACGAAG | 60.068 | 52.381 | 0.00 | 0.00 | 46.39 | 3.79 |
3875 | 9516 | 1.548269 | AGAGAAGAGGCAACGAAGAGG | 59.452 | 52.381 | 0.00 | 0.00 | 46.39 | 3.69 |
3908 | 9551 | 7.042335 | CGGTACAGGAAATCAGAGATAAAACT | 58.958 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
3909 | 9552 | 7.549488 | CGGTACAGGAAATCAGAGATAAAACTT | 59.451 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
3910 | 9553 | 8.669243 | GGTACAGGAAATCAGAGATAAAACTTG | 58.331 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
3911 | 9554 | 7.693969 | ACAGGAAATCAGAGATAAAACTTGG | 57.306 | 36.000 | 0.00 | 0.00 | 0.00 | 3.61 |
3912 | 9555 | 6.660949 | ACAGGAAATCAGAGATAAAACTTGGG | 59.339 | 38.462 | 0.00 | 0.00 | 0.00 | 4.12 |
3913 | 9556 | 6.660949 | CAGGAAATCAGAGATAAAACTTGGGT | 59.339 | 38.462 | 0.00 | 0.00 | 0.00 | 4.51 |
3914 | 9557 | 7.177392 | CAGGAAATCAGAGATAAAACTTGGGTT | 59.823 | 37.037 | 0.00 | 0.00 | 37.24 | 4.11 |
3915 | 9558 | 7.730332 | AGGAAATCAGAGATAAAACTTGGGTTT | 59.270 | 33.333 | 0.00 | 0.00 | 46.27 | 3.27 |
3926 | 9577 | 1.076632 | TTGGGTTTTCAGGGCACGT | 60.077 | 52.632 | 0.00 | 0.00 | 0.00 | 4.49 |
3956 | 9608 | 5.812642 | CGTTGCTATTCTAGTCTGGTTGATT | 59.187 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3957 | 9609 | 6.978659 | CGTTGCTATTCTAGTCTGGTTGATTA | 59.021 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
3973 | 9625 | 9.607285 | CTGGTTGATTATTTGTACTTGTACAAC | 57.393 | 33.333 | 21.44 | 12.66 | 39.39 | 3.32 |
3977 | 9629 | 7.798801 | TGATTATTTGTACTTGTACAACGTGG | 58.201 | 34.615 | 21.44 | 0.00 | 39.39 | 4.94 |
3988 | 9640 | 4.663166 | TGTACAACGTGGACAATTTTGTG | 58.337 | 39.130 | 0.00 | 0.00 | 38.47 | 3.33 |
3996 | 9648 | 2.438868 | GACAATTTTGTGCAGTCCCC | 57.561 | 50.000 | 0.00 | 0.00 | 42.43 | 4.81 |
3999 | 9651 | 1.962807 | CAATTTTGTGCAGTCCCCTGA | 59.037 | 47.619 | 0.00 | 0.00 | 41.50 | 3.86 |
4023 | 9700 | 9.545105 | TGATGTTTGCTTGTTCTTTTCATTTAT | 57.455 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
4041 | 9718 | 8.506168 | TCATTTATGAGGTTTCTGAACATACC | 57.494 | 34.615 | 2.21 | 2.21 | 37.51 | 2.73 |
4044 | 9721 | 5.762179 | ATGAGGTTTCTGAACATACCAGA | 57.238 | 39.130 | 11.26 | 0.00 | 38.74 | 3.86 |
4067 | 9746 | 3.068590 | CCATGGATGATTTTGCAGGGTAC | 59.931 | 47.826 | 5.56 | 0.00 | 34.62 | 3.34 |
4095 | 9782 | 4.218200 | TCAATCCATTGGTTTACACAGCAG | 59.782 | 41.667 | 1.86 | 0.00 | 38.30 | 4.24 |
4096 | 9783 | 2.513753 | TCCATTGGTTTACACAGCAGG | 58.486 | 47.619 | 1.86 | 0.00 | 0.00 | 4.85 |
4101 | 9788 | 1.213182 | TGGTTTACACAGCAGGGTTCA | 59.787 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
4107 | 9794 | 6.038271 | GGTTTACACAGCAGGGTTCATTATAG | 59.962 | 42.308 | 0.00 | 0.00 | 0.00 | 1.31 |
4109 | 9796 | 5.179452 | ACACAGCAGGGTTCATTATAGTT | 57.821 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
4110 | 9797 | 6.308015 | ACACAGCAGGGTTCATTATAGTTA | 57.692 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
4131 | 9818 | 8.901472 | AGTTATATAATACTCTCTGCATCCCA | 57.099 | 34.615 | 0.00 | 0.00 | 0.00 | 4.37 |
4132 | 9819 | 9.326489 | AGTTATATAATACTCTCTGCATCCCAA | 57.674 | 33.333 | 0.00 | 0.00 | 0.00 | 4.12 |
4133 | 9820 | 9.944376 | GTTATATAATACTCTCTGCATCCCAAA | 57.056 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
4138 | 9825 | 7.814264 | AATACTCTCTGCATCCCAAAATAAG | 57.186 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
4139 | 9826 | 5.184892 | ACTCTCTGCATCCCAAAATAAGT | 57.815 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
4140 | 9827 | 4.946157 | ACTCTCTGCATCCCAAAATAAGTG | 59.054 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
4141 | 9828 | 4.922206 | TCTCTGCATCCCAAAATAAGTGT | 58.078 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
4142 | 9829 | 4.943705 | TCTCTGCATCCCAAAATAAGTGTC | 59.056 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
4143 | 9830 | 4.661222 | TCTGCATCCCAAAATAAGTGTCA | 58.339 | 39.130 | 0.00 | 0.00 | 0.00 | 3.58 |
4144 | 9831 | 4.458989 | TCTGCATCCCAAAATAAGTGTCAC | 59.541 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
4145 | 9832 | 4.406456 | TGCATCCCAAAATAAGTGTCACT | 58.594 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
4146 | 9833 | 4.218200 | TGCATCCCAAAATAAGTGTCACTG | 59.782 | 41.667 | 6.18 | 0.00 | 0.00 | 3.66 |
4147 | 9834 | 4.458989 | GCATCCCAAAATAAGTGTCACTGA | 59.541 | 41.667 | 6.18 | 0.00 | 0.00 | 3.41 |
4148 | 9835 | 5.048083 | GCATCCCAAAATAAGTGTCACTGAA | 60.048 | 40.000 | 6.18 | 0.00 | 0.00 | 3.02 |
4149 | 9836 | 6.615088 | CATCCCAAAATAAGTGTCACTGAAG | 58.385 | 40.000 | 6.18 | 0.00 | 0.00 | 3.02 |
4150 | 9837 | 5.690865 | TCCCAAAATAAGTGTCACTGAAGT | 58.309 | 37.500 | 6.18 | 0.00 | 0.00 | 3.01 |
4151 | 9838 | 6.126409 | TCCCAAAATAAGTGTCACTGAAGTT | 58.874 | 36.000 | 6.18 | 0.95 | 0.00 | 2.66 |
4152 | 9839 | 6.039270 | TCCCAAAATAAGTGTCACTGAAGTTG | 59.961 | 38.462 | 6.18 | 7.67 | 0.00 | 3.16 |
4153 | 9840 | 6.183360 | CCCAAAATAAGTGTCACTGAAGTTGT | 60.183 | 38.462 | 6.18 | 0.00 | 0.00 | 3.32 |
4154 | 9841 | 7.012894 | CCCAAAATAAGTGTCACTGAAGTTGTA | 59.987 | 37.037 | 6.18 | 0.00 | 0.00 | 2.41 |
4155 | 9842 | 7.855904 | CCAAAATAAGTGTCACTGAAGTTGTAC | 59.144 | 37.037 | 6.18 | 0.00 | 0.00 | 2.90 |
4156 | 9843 | 8.612619 | CAAAATAAGTGTCACTGAAGTTGTACT | 58.387 | 33.333 | 6.18 | 0.00 | 0.00 | 2.73 |
4157 | 9844 | 9.826574 | AAAATAAGTGTCACTGAAGTTGTACTA | 57.173 | 29.630 | 6.18 | 0.00 | 0.00 | 1.82 |
4158 | 9845 | 9.826574 | AAATAAGTGTCACTGAAGTTGTACTAA | 57.173 | 29.630 | 6.18 | 0.00 | 0.00 | 2.24 |
4159 | 9846 | 9.998106 | AATAAGTGTCACTGAAGTTGTACTAAT | 57.002 | 29.630 | 6.18 | 0.00 | 0.00 | 1.73 |
4160 | 9847 | 9.998106 | ATAAGTGTCACTGAAGTTGTACTAATT | 57.002 | 29.630 | 6.18 | 0.00 | 0.00 | 1.40 |
4161 | 9848 | 8.732746 | AAGTGTCACTGAAGTTGTACTAATTT | 57.267 | 30.769 | 6.18 | 0.00 | 0.00 | 1.82 |
4162 | 9849 | 8.732746 | AGTGTCACTGAAGTTGTACTAATTTT | 57.267 | 30.769 | 4.21 | 0.00 | 0.00 | 1.82 |
4163 | 9850 | 9.174166 | AGTGTCACTGAAGTTGTACTAATTTTT | 57.826 | 29.630 | 4.21 | 0.00 | 0.00 | 1.94 |
4192 | 9879 | 3.305398 | TTTTGCGGTTCAAACTTGTGT | 57.695 | 38.095 | 0.00 | 0.00 | 43.76 | 3.72 |
4193 | 9880 | 3.305398 | TTTGCGGTTCAAACTTGTGTT | 57.695 | 38.095 | 0.00 | 0.00 | 39.58 | 3.32 |
4194 | 9881 | 4.436242 | TTTGCGGTTCAAACTTGTGTTA | 57.564 | 36.364 | 0.00 | 0.00 | 39.58 | 2.41 |
4195 | 9882 | 4.436242 | TTGCGGTTCAAACTTGTGTTAA | 57.564 | 36.364 | 0.00 | 0.00 | 34.96 | 2.01 |
4196 | 9883 | 4.640789 | TGCGGTTCAAACTTGTGTTAAT | 57.359 | 36.364 | 0.00 | 0.00 | 34.96 | 1.40 |
4197 | 9884 | 5.752892 | TGCGGTTCAAACTTGTGTTAATA | 57.247 | 34.783 | 0.00 | 0.00 | 34.96 | 0.98 |
4198 | 9885 | 5.512473 | TGCGGTTCAAACTTGTGTTAATAC | 58.488 | 37.500 | 0.00 | 0.00 | 34.96 | 1.89 |
4199 | 9886 | 5.066117 | TGCGGTTCAAACTTGTGTTAATACA | 59.934 | 36.000 | 0.24 | 0.24 | 34.96 | 2.29 |
4200 | 9887 | 5.623673 | GCGGTTCAAACTTGTGTTAATACAG | 59.376 | 40.000 | 5.15 | 3.34 | 34.96 | 2.74 |
4201 | 9888 | 6.721321 | CGGTTCAAACTTGTGTTAATACAGT | 58.279 | 36.000 | 5.15 | 3.90 | 34.96 | 3.55 |
4202 | 9889 | 6.631238 | CGGTTCAAACTTGTGTTAATACAGTG | 59.369 | 38.462 | 5.15 | 5.70 | 34.96 | 3.66 |
4203 | 9890 | 7.466185 | CGGTTCAAACTTGTGTTAATACAGTGA | 60.466 | 37.037 | 5.15 | 5.80 | 34.96 | 3.41 |
4204 | 9891 | 7.642586 | GGTTCAAACTTGTGTTAATACAGTGAC | 59.357 | 37.037 | 5.15 | 4.74 | 34.96 | 3.67 |
4205 | 9892 | 7.851387 | TCAAACTTGTGTTAATACAGTGACA | 57.149 | 32.000 | 5.15 | 0.00 | 34.96 | 3.58 |
4206 | 9893 | 7.690228 | TCAAACTTGTGTTAATACAGTGACAC | 58.310 | 34.615 | 5.15 | 0.00 | 41.97 | 3.67 |
4207 | 9894 | 7.551262 | TCAAACTTGTGTTAATACAGTGACACT | 59.449 | 33.333 | 1.07 | 1.07 | 42.09 | 3.55 |
4208 | 9895 | 7.859325 | AACTTGTGTTAATACAGTGACACTT | 57.141 | 32.000 | 5.04 | 0.58 | 42.09 | 3.16 |
4209 | 9896 | 8.951787 | AACTTGTGTTAATACAGTGACACTTA | 57.048 | 30.769 | 5.04 | 2.90 | 42.09 | 2.24 |
4210 | 9897 | 9.555727 | AACTTGTGTTAATACAGTGACACTTAT | 57.444 | 29.630 | 5.04 | 5.10 | 42.09 | 1.73 |
4211 | 9898 | 9.555727 | ACTTGTGTTAATACAGTGACACTTATT | 57.444 | 29.630 | 5.04 | 14.45 | 42.09 | 1.40 |
4215 | 9902 | 9.607285 | GTGTTAATACAGTGACACTTATTTTGG | 57.393 | 33.333 | 19.21 | 6.76 | 39.33 | 3.28 |
4216 | 9903 | 8.788806 | TGTTAATACAGTGACACTTATTTTGGG | 58.211 | 33.333 | 19.21 | 6.20 | 0.00 | 4.12 |
4217 | 9904 | 9.005777 | GTTAATACAGTGACACTTATTTTGGGA | 57.994 | 33.333 | 19.21 | 2.50 | 0.00 | 4.37 |
4218 | 9905 | 9.747898 | TTAATACAGTGACACTTATTTTGGGAT | 57.252 | 29.630 | 19.21 | 4.34 | 0.00 | 3.85 |
4220 | 9907 | 8.964476 | ATACAGTGACACTTATTTTGGGATAG | 57.036 | 34.615 | 5.04 | 0.00 | 0.00 | 2.08 |
4221 | 9908 | 7.016153 | ACAGTGACACTTATTTTGGGATAGA | 57.984 | 36.000 | 5.04 | 0.00 | 0.00 | 1.98 |
4222 | 9909 | 7.106239 | ACAGTGACACTTATTTTGGGATAGAG | 58.894 | 38.462 | 5.04 | 0.00 | 0.00 | 2.43 |
4223 | 9910 | 6.540189 | CAGTGACACTTATTTTGGGATAGAGG | 59.460 | 42.308 | 5.04 | 0.00 | 0.00 | 3.69 |
4224 | 9911 | 5.823045 | GTGACACTTATTTTGGGATAGAGGG | 59.177 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4225 | 9912 | 5.729229 | TGACACTTATTTTGGGATAGAGGGA | 59.271 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4226 | 9913 | 6.216662 | TGACACTTATTTTGGGATAGAGGGAA | 59.783 | 38.462 | 0.00 | 0.00 | 0.00 | 3.97 |
4227 | 9914 | 7.091993 | TGACACTTATTTTGGGATAGAGGGAAT | 60.092 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
4239 | 9926 | 5.961421 | GGATAGAGGGAATACTTATCTGGCT | 59.039 | 44.000 | 0.00 | 0.00 | 0.00 | 4.75 |
4251 | 13898 | 6.176014 | ACTTATCTGGCTAATCTTGTACCC | 57.824 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
4254 | 13901 | 2.771943 | TCTGGCTAATCTTGTACCCCTG | 59.228 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
4260 | 13907 | 3.721087 | AATCTTGTACCCCTGTGGAAG | 57.279 | 47.619 | 0.00 | 0.00 | 38.00 | 3.46 |
4294 | 13941 | 3.772572 | TGTAGCACTATTAGCACCTCCAA | 59.227 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
4296 | 13943 | 2.571653 | AGCACTATTAGCACCTCCAACA | 59.428 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
4311 | 13960 | 8.247562 | GCACCTCCAACATGTAATTTTAACATA | 58.752 | 33.333 | 0.00 | 0.00 | 35.82 | 2.29 |
4423 | 14208 | 4.020662 | TGGCAGAAAAACAAAGGTGAAAGT | 60.021 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
4483 | 17000 | 7.490962 | TGAACAGAACTACACAACCTAAATG | 57.509 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
4484 | 17001 | 7.276658 | TGAACAGAACTACACAACCTAAATGA | 58.723 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
4485 | 17002 | 7.225931 | TGAACAGAACTACACAACCTAAATGAC | 59.774 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
4508 | 17030 | 2.754552 | TGCATCTTTAAGCATCACCCAC | 59.245 | 45.455 | 0.00 | 0.00 | 35.51 | 4.61 |
4543 | 17069 | 3.287867 | ACGCATCATTCTCCCAGATTT | 57.712 | 42.857 | 0.00 | 0.00 | 0.00 | 2.17 |
4548 | 17074 | 4.643784 | GCATCATTCTCCCAGATTTCAGTT | 59.356 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
4562 | 17088 | 9.480053 | CCAGATTTCAGTTGAAACAAATTACAT | 57.520 | 29.630 | 9.29 | 0.00 | 45.55 | 2.29 |
4594 | 17120 | 5.511545 | GGCTGTAATCTCATACCCACCTTAG | 60.512 | 48.000 | 0.00 | 0.00 | 0.00 | 2.18 |
4668 | 17195 | 4.890088 | AGCTACAACTGTTTATTCGGTGA | 58.110 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
4692 | 17219 | 3.430098 | GCAAAGAACCCACATCAAACACA | 60.430 | 43.478 | 0.00 | 0.00 | 0.00 | 3.72 |
4716 | 17247 | 3.305398 | CGAAGGTTTCTGCTACAGACT | 57.695 | 47.619 | 0.00 | 0.00 | 40.46 | 3.24 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
43 | 44 | 3.244770 | GGGTTCTCTGGTGTTCACCAATA | 60.245 | 47.826 | 22.41 | 13.94 | 39.61 | 1.90 |
123 | 124 | 1.818674 | GCCATTTTCATCAACCGACCT | 59.181 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
454 | 455 | 2.483889 | GCAAAGGAAGCTAGGCTATCGT | 60.484 | 50.000 | 0.00 | 0.00 | 38.25 | 3.73 |
515 | 516 | 3.430333 | GCTCTACAGCTACTGAAGGTC | 57.570 | 52.381 | 0.78 | 0.00 | 43.09 | 3.85 |
559 | 560 | 8.474025 | AGAAGACTTGTATTACTCAGAATCCAG | 58.526 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
609 | 610 | 5.643379 | TTAAAGATTTCACATGGACTGCC | 57.357 | 39.130 | 0.00 | 0.00 | 0.00 | 4.85 |
610 | 611 | 7.945033 | TTTTTAAAGATTTCACATGGACTGC | 57.055 | 32.000 | 0.00 | 0.00 | 0.00 | 4.40 |
642 | 643 | 9.886132 | ACATATGTACTTTCTCCGTTTCTAAAT | 57.114 | 29.630 | 6.56 | 0.00 | 0.00 | 1.40 |
643 | 644 | 9.146984 | CACATATGTACTTTCTCCGTTTCTAAA | 57.853 | 33.333 | 8.32 | 0.00 | 0.00 | 1.85 |
644 | 645 | 7.762615 | CCACATATGTACTTTCTCCGTTTCTAA | 59.237 | 37.037 | 8.32 | 0.00 | 0.00 | 2.10 |
645 | 646 | 7.093640 | ACCACATATGTACTTTCTCCGTTTCTA | 60.094 | 37.037 | 8.32 | 0.00 | 0.00 | 2.10 |
646 | 647 | 6.106673 | CCACATATGTACTTTCTCCGTTTCT | 58.893 | 40.000 | 8.32 | 0.00 | 0.00 | 2.52 |
647 | 648 | 5.873164 | ACCACATATGTACTTTCTCCGTTTC | 59.127 | 40.000 | 8.32 | 0.00 | 0.00 | 2.78 |
648 | 649 | 5.642063 | CACCACATATGTACTTTCTCCGTTT | 59.358 | 40.000 | 8.32 | 0.00 | 0.00 | 3.60 |
649 | 650 | 5.046878 | TCACCACATATGTACTTTCTCCGTT | 60.047 | 40.000 | 8.32 | 0.00 | 0.00 | 4.44 |
650 | 651 | 4.464951 | TCACCACATATGTACTTTCTCCGT | 59.535 | 41.667 | 8.32 | 0.00 | 0.00 | 4.69 |
651 | 652 | 5.006153 | TCACCACATATGTACTTTCTCCG | 57.994 | 43.478 | 8.32 | 0.00 | 0.00 | 4.63 |
652 | 653 | 6.821388 | AGATCACCACATATGTACTTTCTCC | 58.179 | 40.000 | 8.32 | 0.00 | 0.00 | 3.71 |
653 | 654 | 7.721402 | AGAGATCACCACATATGTACTTTCTC | 58.279 | 38.462 | 8.32 | 15.01 | 0.00 | 2.87 |
654 | 655 | 7.667575 | AGAGATCACCACATATGTACTTTCT | 57.332 | 36.000 | 8.32 | 7.50 | 0.00 | 2.52 |
655 | 656 | 7.766278 | ACAAGAGATCACCACATATGTACTTTC | 59.234 | 37.037 | 8.32 | 2.85 | 0.00 | 2.62 |
656 | 657 | 7.624549 | ACAAGAGATCACCACATATGTACTTT | 58.375 | 34.615 | 8.32 | 0.00 | 0.00 | 2.66 |
657 | 658 | 7.187824 | ACAAGAGATCACCACATATGTACTT | 57.812 | 36.000 | 8.32 | 2.38 | 0.00 | 2.24 |
658 | 659 | 6.798427 | ACAAGAGATCACCACATATGTACT | 57.202 | 37.500 | 8.32 | 1.84 | 0.00 | 2.73 |
659 | 660 | 7.717568 | AGTACAAGAGATCACCACATATGTAC | 58.282 | 38.462 | 8.32 | 0.00 | 40.33 | 2.90 |
660 | 661 | 7.898014 | AGTACAAGAGATCACCACATATGTA | 57.102 | 36.000 | 8.32 | 0.00 | 0.00 | 2.29 |
661 | 662 | 6.798427 | AGTACAAGAGATCACCACATATGT | 57.202 | 37.500 | 1.41 | 1.41 | 0.00 | 2.29 |
662 | 663 | 7.946207 | ACTAGTACAAGAGATCACCACATATG | 58.054 | 38.462 | 0.00 | 0.00 | 0.00 | 1.78 |
663 | 664 | 8.001875 | AGACTAGTACAAGAGATCACCACATAT | 58.998 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
664 | 665 | 7.347252 | AGACTAGTACAAGAGATCACCACATA | 58.653 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
665 | 666 | 6.191315 | AGACTAGTACAAGAGATCACCACAT | 58.809 | 40.000 | 0.00 | 0.00 | 0.00 | 3.21 |
666 | 667 | 5.571285 | AGACTAGTACAAGAGATCACCACA | 58.429 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
667 | 668 | 6.518208 | AAGACTAGTACAAGAGATCACCAC | 57.482 | 41.667 | 0.00 | 0.00 | 0.00 | 4.16 |
668 | 669 | 7.309867 | GGAAAAGACTAGTACAAGAGATCACCA | 60.310 | 40.741 | 0.00 | 0.00 | 0.00 | 4.17 |
669 | 670 | 7.036829 | GGAAAAGACTAGTACAAGAGATCACC | 58.963 | 42.308 | 0.00 | 0.00 | 0.00 | 4.02 |
670 | 671 | 7.036829 | GGGAAAAGACTAGTACAAGAGATCAC | 58.963 | 42.308 | 0.00 | 0.00 | 0.00 | 3.06 |
671 | 672 | 6.154706 | GGGGAAAAGACTAGTACAAGAGATCA | 59.845 | 42.308 | 0.00 | 0.00 | 0.00 | 2.92 |
672 | 673 | 6.407187 | GGGGGAAAAGACTAGTACAAGAGATC | 60.407 | 46.154 | 0.00 | 0.00 | 0.00 | 2.75 |
673 | 674 | 5.425862 | GGGGGAAAAGACTAGTACAAGAGAT | 59.574 | 44.000 | 0.00 | 0.00 | 0.00 | 2.75 |
674 | 675 | 4.776308 | GGGGGAAAAGACTAGTACAAGAGA | 59.224 | 45.833 | 0.00 | 0.00 | 0.00 | 3.10 |
675 | 676 | 5.087391 | GGGGGAAAAGACTAGTACAAGAG | 57.913 | 47.826 | 0.00 | 0.00 | 0.00 | 2.85 |
699 | 700 | 2.690786 | TCGAACGTTCCATAACCCAAG | 58.309 | 47.619 | 22.07 | 4.58 | 31.46 | 3.61 |
718 | 719 | 2.492088 | CCAAAGGGGGAACGAGAATTTC | 59.508 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
722 | 723 | 0.848053 | AACCAAAGGGGGAACGAGAA | 59.152 | 50.000 | 0.00 | 0.00 | 42.91 | 2.87 |
726 | 727 | 1.202842 | ACACTAACCAAAGGGGGAACG | 60.203 | 52.381 | 0.00 | 0.00 | 42.91 | 3.95 |
727 | 728 | 2.670019 | ACACTAACCAAAGGGGGAAC | 57.330 | 50.000 | 0.00 | 0.00 | 42.91 | 3.62 |
737 | 739 | 3.581332 | CCCTTTCCAGTCTACACTAACCA | 59.419 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
744 | 746 | 0.690762 | GCCACCCTTTCCAGTCTACA | 59.309 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
900 | 909 | 1.429148 | CGGAATTTCTCGAAGGGGCG | 61.429 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1170 | 1214 | 0.103208 | GCGGGTCTGATACTCACTGG | 59.897 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1203 | 1248 | 2.038837 | GGGGAACGAGCGGAAAAGG | 61.039 | 63.158 | 0.00 | 0.00 | 0.00 | 3.11 |
1237 | 1282 | 0.951040 | GGTCAGAACACTTCCCTGCG | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 5.18 |
1487 | 1533 | 0.248743 | TCAAGTTATCTACGCGGCCG | 60.249 | 55.000 | 24.05 | 24.05 | 41.14 | 6.13 |
1511 | 1557 | 2.344093 | TCCTCCCAAGAACCTTAGCT | 57.656 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
1532 | 1578 | 2.505407 | CTCCACATGGTCAACCCTGATA | 59.495 | 50.000 | 10.90 | 0.00 | 35.54 | 2.15 |
1571 | 1617 | 1.005450 | AGCTCCTTCTCGTCCTTCTCT | 59.995 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
1575 | 1621 | 1.188219 | TGCAGCTCCTTCTCGTCCTT | 61.188 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1584 | 1630 | 1.278699 | CCTCTTCTTCTGCAGCTCCTT | 59.721 | 52.381 | 9.47 | 0.00 | 0.00 | 3.36 |
1656 | 1702 | 3.384146 | TCATGGGAATATTTGCACGCATT | 59.616 | 39.130 | 0.00 | 0.00 | 34.61 | 3.56 |
1694 | 1740 | 1.153765 | GGAAAATTGCAGAGGCGGC | 60.154 | 57.895 | 0.00 | 0.00 | 45.35 | 6.53 |
1696 | 1742 | 2.660189 | ATTGGAAAATTGCAGAGGCG | 57.340 | 45.000 | 0.00 | 0.00 | 45.35 | 5.52 |
1754 | 1804 | 3.827008 | ATCACTATGAGCACGATGGTT | 57.173 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
1777 | 1827 | 4.884668 | AGTTAGAAAACATCTCCGGTGA | 57.115 | 40.909 | 8.96 | 8.96 | 39.71 | 4.02 |
1778 | 1828 | 6.924060 | CCTATAGTTAGAAAACATCTCCGGTG | 59.076 | 42.308 | 0.00 | 0.00 | 39.71 | 4.94 |
1781 | 1831 | 6.924060 | CACCCTATAGTTAGAAAACATCTCCG | 59.076 | 42.308 | 0.00 | 0.00 | 39.71 | 4.63 |
1782 | 1832 | 8.019656 | TCACCCTATAGTTAGAAAACATCTCC | 57.980 | 38.462 | 0.00 | 0.00 | 39.71 | 3.71 |
1784 | 1834 | 7.501844 | GCTCACCCTATAGTTAGAAAACATCT | 58.498 | 38.462 | 0.00 | 0.00 | 42.48 | 2.90 |
1803 | 1853 | 0.861837 | CAATATCCTTCGCGCTCACC | 59.138 | 55.000 | 5.56 | 0.00 | 0.00 | 4.02 |
1804 | 1854 | 0.233332 | GCAATATCCTTCGCGCTCAC | 59.767 | 55.000 | 5.56 | 0.00 | 0.00 | 3.51 |
1813 | 1863 | 8.448008 | TCTACCTAATGATTTGGCAATATCCTT | 58.552 | 33.333 | 0.00 | 8.90 | 0.00 | 3.36 |
1843 | 1893 | 9.905713 | ATGAATAATCAACTGGCTAGAAACTAA | 57.094 | 29.630 | 3.17 | 0.00 | 39.49 | 2.24 |
1877 | 1927 | 5.646360 | GCCAGGTAGTTAATTGCTTGTTAGA | 59.354 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
1879 | 1929 | 5.566469 | AGCCAGGTAGTTAATTGCTTGTTA | 58.434 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
1902 | 1952 | 6.071447 | ACCAATGCAGTGAAATATTGCTACAA | 60.071 | 34.615 | 17.16 | 0.00 | 42.07 | 2.41 |
1946 | 1996 | 9.754382 | GTGTGCATTCCTAATGAATAATCAAAT | 57.246 | 29.630 | 3.86 | 0.00 | 41.85 | 2.32 |
1958 | 2251 | 5.047164 | TGAATTGCTTGTGTGCATTCCTAAT | 60.047 | 36.000 | 0.00 | 0.00 | 42.96 | 1.73 |
1983 | 2276 | 4.640201 | TGCAAATTACTATGAGGCAGGTTC | 59.360 | 41.667 | 0.00 | 0.00 | 0.00 | 3.62 |
2014 | 2307 | 4.010349 | CCTCATCCTGTAGTGGAAAAACC | 58.990 | 47.826 | 0.00 | 0.00 | 39.85 | 3.27 |
2021 | 2314 | 3.107601 | TCCTTTCCTCATCCTGTAGTGG | 58.892 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2030 | 2323 | 6.179906 | TGATCTGGTTATCCTTTCCTCATC | 57.820 | 41.667 | 0.00 | 0.00 | 34.23 | 2.92 |
2065 | 2360 | 9.143631 | GGAATGAAATGTCAGGAACTAATTTTG | 57.856 | 33.333 | 0.00 | 0.00 | 37.14 | 2.44 |
2088 | 2383 | 5.943416 | ACCGTTATTTCACAGATCATTGGAA | 59.057 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2096 | 4859 | 4.253685 | CCACAGACCGTTATTTCACAGAT | 58.746 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
2133 | 4898 | 7.246311 | CAGCATATCTTCATCTTGAAAAACGT | 58.754 | 34.615 | 0.00 | 0.00 | 35.73 | 3.99 |
2135 | 4900 | 7.765307 | TCCAGCATATCTTCATCTTGAAAAAC | 58.235 | 34.615 | 0.00 | 0.00 | 35.73 | 2.43 |
2139 | 4904 | 7.114754 | AGTTTCCAGCATATCTTCATCTTGAA | 58.885 | 34.615 | 0.00 | 0.00 | 34.79 | 2.69 |
2147 | 4912 | 7.467623 | CAAGTACAAGTTTCCAGCATATCTTC | 58.532 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
2166 | 4931 | 2.474410 | AGGCCTTACTGTGCAAGTAC | 57.526 | 50.000 | 0.00 | 0.00 | 41.21 | 2.73 |
2186 | 4951 | 7.781056 | AGTAAAATGATGACCACAACAAAAGT | 58.219 | 30.769 | 0.00 | 0.00 | 32.91 | 2.66 |
2187 | 4952 | 8.647143 | AAGTAAAATGATGACCACAACAAAAG | 57.353 | 30.769 | 0.00 | 0.00 | 32.91 | 2.27 |
2188 | 4953 | 8.253810 | TGAAGTAAAATGATGACCACAACAAAA | 58.746 | 29.630 | 0.00 | 0.00 | 32.91 | 2.44 |
2277 | 5045 | 7.081349 | CCTTTATTTGCAACGATTACTGTTCA | 58.919 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2286 | 5054 | 3.088532 | TGGAGCCTTTATTTGCAACGAT | 58.911 | 40.909 | 0.00 | 0.00 | 0.00 | 3.73 |
2299 | 5067 | 7.070322 | AGTCAATAAATGCATAAATGGAGCCTT | 59.930 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
2301 | 5069 | 6.752168 | AGTCAATAAATGCATAAATGGAGCC | 58.248 | 36.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2315 | 5083 | 8.706322 | ACCAAACCTAGAACAAGTCAATAAAT | 57.294 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
2316 | 5084 | 8.528044 | AACCAAACCTAGAACAAGTCAATAAA | 57.472 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
2319 | 5087 | 7.057894 | TGTAACCAAACCTAGAACAAGTCAAT | 58.942 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2352 | 5120 | 9.368674 | CATTCACAATCCAATAAGCAAACAATA | 57.631 | 29.630 | 0.00 | 0.00 | 0.00 | 1.90 |
2356 | 5124 | 6.646240 | ACACATTCACAATCCAATAAGCAAAC | 59.354 | 34.615 | 0.00 | 0.00 | 0.00 | 2.93 |
2418 | 5254 | 8.419922 | ACTGATAAACTATAAGGCCTAGTACC | 57.580 | 38.462 | 5.16 | 0.00 | 0.00 | 3.34 |
2460 | 5297 | 2.426522 | CAATCATGACGGTTCAGTGGT | 58.573 | 47.619 | 0.00 | 0.00 | 34.35 | 4.16 |
2496 | 5333 | 8.345565 | GCATTTCTCTGAAATATAACCACGAAT | 58.654 | 33.333 | 5.38 | 0.00 | 0.00 | 3.34 |
2500 | 5337 | 9.076596 | GTTTGCATTTCTCTGAAATATAACCAC | 57.923 | 33.333 | 5.38 | 0.00 | 0.00 | 4.16 |
2571 | 5421 | 1.697082 | TTTGTGGACCACGGTGCCTA | 61.697 | 55.000 | 19.67 | 0.00 | 37.14 | 3.93 |
2645 | 5503 | 3.267812 | TGAAAATCTGCAGGAATCTCCCT | 59.732 | 43.478 | 15.13 | 0.00 | 37.19 | 4.20 |
2706 | 5564 | 3.281727 | TCGCCTTTCTGGAAAGCATAT | 57.718 | 42.857 | 15.30 | 0.00 | 44.76 | 1.78 |
2727 | 5585 | 2.510238 | GAAGCTCCGCGACTGCAT | 60.510 | 61.111 | 8.23 | 0.83 | 42.97 | 3.96 |
2757 | 5615 | 2.611292 | GACAGTTACCTGCTCATCATGC | 59.389 | 50.000 | 0.00 | 0.00 | 42.81 | 4.06 |
2810 | 5751 | 6.367969 | CGTGGAAATTAACACAAGCTAGTAGT | 59.632 | 38.462 | 11.53 | 0.00 | 37.45 | 2.73 |
2811 | 5752 | 6.588756 | TCGTGGAAATTAACACAAGCTAGTAG | 59.411 | 38.462 | 11.53 | 0.00 | 37.45 | 2.57 |
2812 | 5753 | 6.457355 | TCGTGGAAATTAACACAAGCTAGTA | 58.543 | 36.000 | 11.53 | 0.00 | 37.45 | 1.82 |
2814 | 5755 | 5.637810 | TCTCGTGGAAATTAACACAAGCTAG | 59.362 | 40.000 | 11.53 | 0.00 | 37.45 | 3.42 |
2849 | 5811 | 7.568199 | ACTGGCAATATAACTTGTTCATACC | 57.432 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2899 | 6178 | 5.593909 | AGGAACATCATGGCGAAATGATAAA | 59.406 | 36.000 | 11.54 | 0.00 | 43.83 | 1.40 |
2982 | 6262 | 3.550437 | AGGCCTTACTGTGATAAGCAG | 57.450 | 47.619 | 0.00 | 0.00 | 39.67 | 4.24 |
2983 | 6263 | 4.301072 | AAAGGCCTTACTGTGATAAGCA | 57.699 | 40.909 | 20.84 | 0.00 | 31.80 | 3.91 |
2984 | 6264 | 8.507249 | CAATATAAAGGCCTTACTGTGATAAGC | 58.493 | 37.037 | 20.84 | 0.00 | 31.80 | 3.09 |
2985 | 6265 | 8.507249 | GCAATATAAAGGCCTTACTGTGATAAG | 58.493 | 37.037 | 20.84 | 3.53 | 32.78 | 1.73 |
2986 | 6266 | 8.217799 | AGCAATATAAAGGCCTTACTGTGATAA | 58.782 | 33.333 | 20.84 | 0.00 | 0.00 | 1.75 |
2987 | 6267 | 7.745717 | AGCAATATAAAGGCCTTACTGTGATA | 58.254 | 34.615 | 20.84 | 5.78 | 0.00 | 2.15 |
2988 | 6268 | 6.605119 | AGCAATATAAAGGCCTTACTGTGAT | 58.395 | 36.000 | 20.84 | 9.62 | 0.00 | 3.06 |
3006 | 6286 | 7.287696 | TGAAGTATAGACATGACCAGAGCAATA | 59.712 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
3016 | 6296 | 7.492524 | TCATCCAAGTGAAGTATAGACATGAC | 58.507 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
3017 | 6297 | 7.343057 | ACTCATCCAAGTGAAGTATAGACATGA | 59.657 | 37.037 | 0.00 | 0.00 | 0.00 | 3.07 |
3018 | 6298 | 7.495901 | ACTCATCCAAGTGAAGTATAGACATG | 58.504 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
3019 | 6299 | 7.343057 | TGACTCATCCAAGTGAAGTATAGACAT | 59.657 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
3025 | 6316 | 8.083828 | AGTAATGACTCATCCAAGTGAAGTAT | 57.916 | 34.615 | 0.00 | 0.00 | 0.00 | 2.12 |
3050 | 6341 | 8.465999 | ACGGAGTTCATGAAATATATTTTGCAA | 58.534 | 29.630 | 10.35 | 0.00 | 37.78 | 4.08 |
3078 | 6369 | 6.873997 | TGTTACTCCGAATCAACATATCTGT | 58.126 | 36.000 | 0.00 | 0.00 | 37.12 | 3.41 |
3180 | 6490 | 6.552445 | AAGCAACAATCTCTAGGATACAGT | 57.448 | 37.500 | 0.00 | 0.00 | 41.41 | 3.55 |
3187 | 6497 | 2.424956 | GCCCAAAGCAACAATCTCTAGG | 59.575 | 50.000 | 0.00 | 0.00 | 42.97 | 3.02 |
3312 | 6628 | 7.773690 | ACCACCAAGTATAAAGGACACATATTC | 59.226 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
3336 | 8863 | 6.237755 | GCACAACGTTACTGATGAACTATACC | 60.238 | 42.308 | 0.00 | 0.00 | 0.00 | 2.73 |
3360 | 8887 | 3.255642 | TGGCTTTTTACTGGAATGACTGC | 59.744 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
3516 | 9047 | 3.625313 | GCCTCTTCTTTATTCCTGTCAGC | 59.375 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
3550 | 9081 | 6.223852 | TGTACAACTCTGATCTTGAGGAAAC | 58.776 | 40.000 | 16.61 | 10.99 | 35.98 | 2.78 |
3552 | 9083 | 5.047021 | CCTGTACAACTCTGATCTTGAGGAA | 60.047 | 44.000 | 16.61 | 1.85 | 35.98 | 3.36 |
3588 | 9130 | 2.419713 | CCATCACCATGTCTCTGACCTG | 60.420 | 54.545 | 0.00 | 0.00 | 0.00 | 4.00 |
3608 | 9150 | 4.452455 | CCTGTCACTATGTTTTGTGTCTCC | 59.548 | 45.833 | 0.00 | 0.00 | 35.82 | 3.71 |
3620 | 9162 | 0.904649 | TGCCTGGTCCTGTCACTATG | 59.095 | 55.000 | 0.00 | 0.00 | 0.00 | 2.23 |
3633 | 9175 | 1.452108 | GGGGATTTCTCGTGCCTGG | 60.452 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
3673 | 9215 | 1.326213 | CCCTGTCATCGCCTCTCTGT | 61.326 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3709 | 9251 | 8.030106 | CCGTTCCTATCTCTATCTTTTATGTCC | 58.970 | 40.741 | 0.00 | 0.00 | 0.00 | 4.02 |
3714 | 9256 | 7.173907 | CGTACCCGTTCCTATCTCTATCTTTTA | 59.826 | 40.741 | 0.00 | 0.00 | 0.00 | 1.52 |
3724 | 9266 | 3.287867 | TTCTCGTACCCGTTCCTATCT | 57.712 | 47.619 | 0.00 | 0.00 | 35.01 | 1.98 |
3727 | 9269 | 2.355756 | CGATTTCTCGTACCCGTTCCTA | 59.644 | 50.000 | 0.00 | 0.00 | 40.07 | 2.94 |
3737 | 9279 | 0.661552 | CTCTCGGGCGATTTCTCGTA | 59.338 | 55.000 | 0.00 | 0.00 | 46.71 | 3.43 |
3748 | 9290 | 2.896443 | CCTCTTGGTCTCTCGGGC | 59.104 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
3751 | 9293 | 1.137825 | GTCGCCTCTTGGTCTCTCG | 59.862 | 63.158 | 0.00 | 0.00 | 35.27 | 4.04 |
3758 | 9300 | 1.004560 | TCTGCTTGTCGCCTCTTGG | 60.005 | 57.895 | 0.00 | 0.00 | 38.05 | 3.61 |
3771 | 9313 | 2.685017 | TGTCATCGCCCCTCTGCT | 60.685 | 61.111 | 0.00 | 0.00 | 0.00 | 4.24 |
3778 | 9320 | 2.190578 | CTTCCCCTGTCATCGCCC | 59.809 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
3866 | 9507 | 0.320697 | CCGTTCTTCCCCTCTTCGTT | 59.679 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3871 | 9512 | 1.558233 | CTGTACCGTTCTTCCCCTCT | 58.442 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3872 | 9513 | 0.535797 | CCTGTACCGTTCTTCCCCTC | 59.464 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3875 | 9516 | 2.845363 | TTTCCTGTACCGTTCTTCCC | 57.155 | 50.000 | 0.00 | 0.00 | 0.00 | 3.97 |
3908 | 9551 | 1.076632 | ACGTGCCCTGAAAACCCAA | 60.077 | 52.632 | 0.00 | 0.00 | 0.00 | 4.12 |
3909 | 9552 | 1.826054 | CACGTGCCCTGAAAACCCA | 60.826 | 57.895 | 0.82 | 0.00 | 0.00 | 4.51 |
3910 | 9553 | 3.039134 | CACGTGCCCTGAAAACCC | 58.961 | 61.111 | 0.82 | 0.00 | 0.00 | 4.11 |
3911 | 9554 | 2.193536 | AGCACGTGCCCTGAAAACC | 61.194 | 57.895 | 35.51 | 5.62 | 43.38 | 3.27 |
3912 | 9555 | 1.008538 | CAGCACGTGCCCTGAAAAC | 60.009 | 57.895 | 35.51 | 6.41 | 43.38 | 2.43 |
3913 | 9556 | 3.431055 | CAGCACGTGCCCTGAAAA | 58.569 | 55.556 | 35.51 | 0.00 | 43.38 | 2.29 |
3926 | 9577 | 1.207089 | ACTAGAATAGCAACGGCAGCA | 59.793 | 47.619 | 0.00 | 0.00 | 44.39 | 4.41 |
3973 | 9625 | 2.384382 | GACTGCACAAAATTGTCCACG | 58.616 | 47.619 | 0.00 | 0.00 | 39.91 | 4.94 |
3977 | 9629 | 1.963515 | AGGGGACTGCACAAAATTGTC | 59.036 | 47.619 | 0.00 | 0.00 | 38.37 | 3.18 |
3995 | 9647 | 5.350633 | TGAAAAGAACAAGCAAACATCAGG | 58.649 | 37.500 | 0.00 | 0.00 | 0.00 | 3.86 |
3996 | 9648 | 7.473027 | AATGAAAAGAACAAGCAAACATCAG | 57.527 | 32.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3999 | 9651 | 9.545105 | TCATAAATGAAAAGAACAAGCAAACAT | 57.455 | 25.926 | 0.00 | 0.00 | 33.08 | 2.71 |
4023 | 9700 | 4.262894 | GGTCTGGTATGTTCAGAAACCTCA | 60.263 | 45.833 | 4.47 | 0.00 | 42.13 | 3.86 |
4041 | 9718 | 3.181479 | CCTGCAAAATCATCCATGGTCTG | 60.181 | 47.826 | 12.58 | 10.96 | 0.00 | 3.51 |
4044 | 9721 | 2.112998 | CCCTGCAAAATCATCCATGGT | 58.887 | 47.619 | 12.58 | 0.00 | 0.00 | 3.55 |
4067 | 9746 | 5.010516 | TGTGTAAACCAATGGATTGAGTTGG | 59.989 | 40.000 | 6.16 | 0.00 | 46.08 | 3.77 |
4107 | 9794 | 9.944376 | TTTGGGATGCAGAGAGTATTATATAAC | 57.056 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
4118 | 9805 | 4.946157 | ACACTTATTTTGGGATGCAGAGAG | 59.054 | 41.667 | 0.00 | 0.00 | 0.00 | 3.20 |
4119 | 9806 | 4.922206 | ACACTTATTTTGGGATGCAGAGA | 58.078 | 39.130 | 0.00 | 0.00 | 0.00 | 3.10 |
4120 | 9807 | 4.701651 | TGACACTTATTTTGGGATGCAGAG | 59.298 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
4121 | 9808 | 4.458989 | GTGACACTTATTTTGGGATGCAGA | 59.541 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
4122 | 9809 | 4.460382 | AGTGACACTTATTTTGGGATGCAG | 59.540 | 41.667 | 1.07 | 0.00 | 0.00 | 4.41 |
4123 | 9810 | 4.218200 | CAGTGACACTTATTTTGGGATGCA | 59.782 | 41.667 | 5.04 | 0.00 | 0.00 | 3.96 |
4124 | 9811 | 4.458989 | TCAGTGACACTTATTTTGGGATGC | 59.541 | 41.667 | 5.04 | 0.00 | 0.00 | 3.91 |
4125 | 9812 | 6.207417 | ACTTCAGTGACACTTATTTTGGGATG | 59.793 | 38.462 | 5.04 | 2.97 | 0.00 | 3.51 |
4126 | 9813 | 6.306987 | ACTTCAGTGACACTTATTTTGGGAT | 58.693 | 36.000 | 5.04 | 0.00 | 0.00 | 3.85 |
4127 | 9814 | 5.690865 | ACTTCAGTGACACTTATTTTGGGA | 58.309 | 37.500 | 5.04 | 0.00 | 0.00 | 4.37 |
4128 | 9815 | 6.183360 | ACAACTTCAGTGACACTTATTTTGGG | 60.183 | 38.462 | 5.04 | 0.00 | 0.00 | 4.12 |
4129 | 9816 | 6.795399 | ACAACTTCAGTGACACTTATTTTGG | 58.205 | 36.000 | 5.04 | 0.00 | 0.00 | 3.28 |
4130 | 9817 | 8.612619 | AGTACAACTTCAGTGACACTTATTTTG | 58.387 | 33.333 | 5.04 | 9.77 | 0.00 | 2.44 |
4131 | 9818 | 8.732746 | AGTACAACTTCAGTGACACTTATTTT | 57.267 | 30.769 | 5.04 | 0.00 | 0.00 | 1.82 |
4132 | 9819 | 9.826574 | TTAGTACAACTTCAGTGACACTTATTT | 57.173 | 29.630 | 5.04 | 0.00 | 0.00 | 1.40 |
4133 | 9820 | 9.998106 | ATTAGTACAACTTCAGTGACACTTATT | 57.002 | 29.630 | 5.04 | 0.00 | 0.00 | 1.40 |
4134 | 9821 | 9.998106 | AATTAGTACAACTTCAGTGACACTTAT | 57.002 | 29.630 | 5.04 | 0.00 | 0.00 | 1.73 |
4135 | 9822 | 9.826574 | AAATTAGTACAACTTCAGTGACACTTA | 57.173 | 29.630 | 5.04 | 0.00 | 0.00 | 2.24 |
4136 | 9823 | 8.732746 | AAATTAGTACAACTTCAGTGACACTT | 57.267 | 30.769 | 5.04 | 0.00 | 0.00 | 3.16 |
4137 | 9824 | 8.732746 | AAAATTAGTACAACTTCAGTGACACT | 57.267 | 30.769 | 1.07 | 1.07 | 0.00 | 3.55 |
4173 | 9860 | 3.305398 | AACACAAGTTTGAACCGCAAA | 57.695 | 38.095 | 0.00 | 0.00 | 43.89 | 3.68 |
4174 | 9861 | 4.436242 | TTAACACAAGTTTGAACCGCAA | 57.564 | 36.364 | 0.00 | 0.00 | 39.15 | 4.85 |
4175 | 9862 | 4.640789 | ATTAACACAAGTTTGAACCGCA | 57.359 | 36.364 | 0.00 | 0.00 | 39.15 | 5.69 |
4176 | 9863 | 5.512473 | TGTATTAACACAAGTTTGAACCGC | 58.488 | 37.500 | 0.00 | 0.00 | 39.15 | 5.68 |
4177 | 9864 | 6.631238 | CACTGTATTAACACAAGTTTGAACCG | 59.369 | 38.462 | 0.00 | 0.00 | 39.15 | 4.44 |
4178 | 9865 | 7.642586 | GTCACTGTATTAACACAAGTTTGAACC | 59.357 | 37.037 | 0.00 | 0.00 | 39.15 | 3.62 |
4179 | 9866 | 8.178964 | TGTCACTGTATTAACACAAGTTTGAAC | 58.821 | 33.333 | 0.00 | 0.00 | 39.15 | 3.18 |
4180 | 9867 | 8.178964 | GTGTCACTGTATTAACACAAGTTTGAA | 58.821 | 33.333 | 0.00 | 0.00 | 41.24 | 2.69 |
4181 | 9868 | 7.551262 | AGTGTCACTGTATTAACACAAGTTTGA | 59.449 | 33.333 | 4.21 | 0.00 | 43.43 | 2.69 |
4182 | 9869 | 7.693952 | AGTGTCACTGTATTAACACAAGTTTG | 58.306 | 34.615 | 4.21 | 0.00 | 43.43 | 2.93 |
4183 | 9870 | 7.859325 | AGTGTCACTGTATTAACACAAGTTT | 57.141 | 32.000 | 4.21 | 0.00 | 43.43 | 2.66 |
4184 | 9871 | 7.859325 | AAGTGTCACTGTATTAACACAAGTT | 57.141 | 32.000 | 6.18 | 0.00 | 43.43 | 2.66 |
4185 | 9872 | 9.555727 | AATAAGTGTCACTGTATTAACACAAGT | 57.444 | 29.630 | 6.18 | 0.00 | 43.43 | 3.16 |
4189 | 9876 | 9.607285 | CCAAAATAAGTGTCACTGTATTAACAC | 57.393 | 33.333 | 6.18 | 0.00 | 41.77 | 3.32 |
4190 | 9877 | 8.788806 | CCCAAAATAAGTGTCACTGTATTAACA | 58.211 | 33.333 | 6.18 | 0.00 | 0.00 | 2.41 |
4191 | 9878 | 9.005777 | TCCCAAAATAAGTGTCACTGTATTAAC | 57.994 | 33.333 | 6.18 | 0.00 | 0.00 | 2.01 |
4192 | 9879 | 9.747898 | ATCCCAAAATAAGTGTCACTGTATTAA | 57.252 | 29.630 | 6.18 | 0.00 | 0.00 | 1.40 |
4194 | 9881 | 9.396022 | CTATCCCAAAATAAGTGTCACTGTATT | 57.604 | 33.333 | 6.18 | 9.72 | 0.00 | 1.89 |
4195 | 9882 | 8.768397 | TCTATCCCAAAATAAGTGTCACTGTAT | 58.232 | 33.333 | 6.18 | 4.35 | 0.00 | 2.29 |
4196 | 9883 | 8.141298 | TCTATCCCAAAATAAGTGTCACTGTA | 57.859 | 34.615 | 6.18 | 2.12 | 0.00 | 2.74 |
4197 | 9884 | 7.016153 | TCTATCCCAAAATAAGTGTCACTGT | 57.984 | 36.000 | 6.18 | 0.00 | 0.00 | 3.55 |
4198 | 9885 | 6.540189 | CCTCTATCCCAAAATAAGTGTCACTG | 59.460 | 42.308 | 6.18 | 0.00 | 0.00 | 3.66 |
4199 | 9886 | 6.353082 | CCCTCTATCCCAAAATAAGTGTCACT | 60.353 | 42.308 | 0.00 | 0.00 | 0.00 | 3.41 |
4200 | 9887 | 5.823045 | CCCTCTATCCCAAAATAAGTGTCAC | 59.177 | 44.000 | 0.00 | 0.00 | 0.00 | 3.67 |
4201 | 9888 | 5.729229 | TCCCTCTATCCCAAAATAAGTGTCA | 59.271 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
4202 | 9889 | 6.248569 | TCCCTCTATCCCAAAATAAGTGTC | 57.751 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
4203 | 9890 | 6.652205 | TTCCCTCTATCCCAAAATAAGTGT | 57.348 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
4204 | 9891 | 8.440771 | AGTATTCCCTCTATCCCAAAATAAGTG | 58.559 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
4205 | 9892 | 8.582891 | AGTATTCCCTCTATCCCAAAATAAGT | 57.417 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
4209 | 9896 | 9.411848 | AGATAAGTATTCCCTCTATCCCAAAAT | 57.588 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
4210 | 9897 | 8.660435 | CAGATAAGTATTCCCTCTATCCCAAAA | 58.340 | 37.037 | 0.00 | 0.00 | 0.00 | 2.44 |
4211 | 9898 | 7.237679 | CCAGATAAGTATTCCCTCTATCCCAAA | 59.762 | 40.741 | 0.00 | 0.00 | 0.00 | 3.28 |
4212 | 9899 | 6.730977 | CCAGATAAGTATTCCCTCTATCCCAA | 59.269 | 42.308 | 0.00 | 0.00 | 0.00 | 4.12 |
4213 | 9900 | 6.264528 | CCAGATAAGTATTCCCTCTATCCCA | 58.735 | 44.000 | 0.00 | 0.00 | 0.00 | 4.37 |
4214 | 9901 | 5.129650 | GCCAGATAAGTATTCCCTCTATCCC | 59.870 | 48.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4215 | 9902 | 5.961421 | AGCCAGATAAGTATTCCCTCTATCC | 59.039 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4216 | 9903 | 8.596781 | TTAGCCAGATAAGTATTCCCTCTATC | 57.403 | 38.462 | 0.00 | 0.00 | 0.00 | 2.08 |
4217 | 9904 | 9.207868 | GATTAGCCAGATAAGTATTCCCTCTAT | 57.792 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
4218 | 9905 | 8.402683 | AGATTAGCCAGATAAGTATTCCCTCTA | 58.597 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
4219 | 9906 | 7.252678 | AGATTAGCCAGATAAGTATTCCCTCT | 58.747 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
4220 | 9907 | 7.489239 | AGATTAGCCAGATAAGTATTCCCTC | 57.511 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4221 | 9908 | 7.293535 | ACAAGATTAGCCAGATAAGTATTCCCT | 59.706 | 37.037 | 0.00 | 0.00 | 0.00 | 4.20 |
4222 | 9909 | 7.454225 | ACAAGATTAGCCAGATAAGTATTCCC | 58.546 | 38.462 | 0.00 | 0.00 | 0.00 | 3.97 |
4223 | 9910 | 9.425577 | GTACAAGATTAGCCAGATAAGTATTCC | 57.574 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
4224 | 9911 | 9.425577 | GGTACAAGATTAGCCAGATAAGTATTC | 57.574 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
4225 | 9912 | 8.376270 | GGGTACAAGATTAGCCAGATAAGTATT | 58.624 | 37.037 | 0.00 | 0.00 | 39.14 | 1.89 |
4226 | 9913 | 7.038231 | GGGGTACAAGATTAGCCAGATAAGTAT | 60.038 | 40.741 | 0.00 | 0.00 | 40.81 | 2.12 |
4227 | 9914 | 6.269307 | GGGGTACAAGATTAGCCAGATAAGTA | 59.731 | 42.308 | 0.00 | 0.00 | 40.81 | 2.24 |
4239 | 9926 | 3.521937 | CCTTCCACAGGGGTACAAGATTA | 59.478 | 47.826 | 0.00 | 0.00 | 39.39 | 1.75 |
4254 | 13901 | 4.142752 | GCTACAACCGATAAAACCTTCCAC | 60.143 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
4260 | 13907 | 6.673154 | AATAGTGCTACAACCGATAAAACC | 57.327 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
4311 | 13960 | 6.488006 | ACAGTGCTCTAATCATGTCAGTTTTT | 59.512 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
4378 | 14027 | 9.149225 | TGCCATTTTACAATGATTTTGTGATAC | 57.851 | 29.630 | 3.10 | 0.00 | 42.35 | 2.24 |
4379 | 14028 | 9.368674 | CTGCCATTTTACAATGATTTTGTGATA | 57.631 | 29.630 | 3.10 | 0.00 | 42.35 | 2.15 |
4380 | 14029 | 8.095792 | TCTGCCATTTTACAATGATTTTGTGAT | 58.904 | 29.630 | 3.10 | 0.00 | 42.35 | 3.06 |
4386 | 14041 | 9.118300 | TGTTTTTCTGCCATTTTACAATGATTT | 57.882 | 25.926 | 3.10 | 0.00 | 42.35 | 2.17 |
4389 | 14044 | 8.498054 | TTTGTTTTTCTGCCATTTTACAATGA | 57.502 | 26.923 | 3.10 | 0.00 | 42.35 | 2.57 |
4390 | 14045 | 7.856894 | CCTTTGTTTTTCTGCCATTTTACAATG | 59.143 | 33.333 | 0.00 | 0.00 | 39.79 | 2.82 |
4423 | 14208 | 5.022282 | TCATCACTCACTGAAGTTGTCAA | 57.978 | 39.130 | 0.00 | 0.00 | 35.22 | 3.18 |
4437 | 16928 | 2.957680 | TCTCATCTCCAGCTCATCACTC | 59.042 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4483 | 17000 | 4.439289 | GGGTGATGCTTAAAGATGCAAGTC | 60.439 | 45.833 | 0.00 | 0.00 | 42.74 | 3.01 |
4484 | 17001 | 3.445096 | GGGTGATGCTTAAAGATGCAAGT | 59.555 | 43.478 | 0.00 | 0.00 | 42.74 | 3.16 |
4485 | 17002 | 3.444742 | TGGGTGATGCTTAAAGATGCAAG | 59.555 | 43.478 | 0.00 | 0.00 | 42.74 | 4.01 |
4543 | 17069 | 7.275888 | AGCTGATGTAATTTGTTTCAACTGA | 57.724 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4548 | 17074 | 6.563422 | GCCATAGCTGATGTAATTTGTTTCA | 58.437 | 36.000 | 0.00 | 0.00 | 33.19 | 2.69 |
4641 | 17167 | 5.291128 | CCGAATAAACAGTTGTAGCTAGTGG | 59.709 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4668 | 17195 | 3.450457 | TGTTTGATGTGGGTTCTTTGCTT | 59.550 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
4692 | 17219 | 1.968493 | TGTAGCAGAAACCTTCGGAGT | 59.032 | 47.619 | 0.00 | 0.00 | 34.02 | 3.85 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.