Multiple sequence alignment - TraesCS5B01G501200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G501200 chr5B 100.000 8788 0 0 1 8788 668466268 668475055 0.000000e+00 16229.0
1 TraesCS5B01G501200 chr5B 86.400 125 15 2 1467 1591 672963953 672964075 1.540000e-27 135.0
2 TraesCS5B01G501200 chr5D 95.849 6746 202 39 1836 8548 529535147 529541847 0.000000e+00 10835.0
3 TraesCS5B01G501200 chr5D 93.904 771 47 0 1021 1791 529534191 529534961 0.000000e+00 1164.0
4 TraesCS5B01G501200 chr5D 94.256 383 18 4 646 1026 529533630 529534010 4.570000e-162 582.0
5 TraesCS5B01G501200 chr5A 94.580 5387 210 29 2910 8274 657542989 657548315 0.000000e+00 8255.0
6 TraesCS5B01G501200 chr5A 90.893 2306 143 37 624 2914 657540565 657542818 0.000000e+00 3033.0
7 TraesCS5B01G501200 chr5A 83.253 621 84 11 2 606 10829079 10829695 3.590000e-153 553.0
8 TraesCS5B01G501200 chr5A 91.071 224 12 7 8283 8502 657548361 657548580 6.670000e-76 296.0
9 TraesCS5B01G501200 chr2D 85.905 1050 89 24 4667 5691 631932663 631933678 0.000000e+00 1064.0
10 TraesCS5B01G501200 chr2D 81.250 640 102 13 2 625 558377800 558377163 1.320000e-137 501.0
11 TraesCS5B01G501200 chr2D 82.765 586 54 10 4119 4699 631932113 631932656 6.170000e-131 479.0
12 TraesCS5B01G501200 chr2D 87.500 312 32 4 3434 3739 631886853 631887163 3.900000e-93 353.0
13 TraesCS5B01G501200 chr2D 82.915 398 59 3 3 396 78503113 78503505 5.050000e-92 350.0
14 TraesCS5B01G501200 chr2D 83.934 361 47 8 4586 4944 642934801 642934450 1.410000e-87 335.0
15 TraesCS5B01G501200 chr2D 79.472 341 45 8 1514 1834 631541812 631541477 1.490000e-52 219.0
16 TraesCS5B01G501200 chr2D 91.667 96 8 0 1598 1693 631930611 631930706 5.530000e-27 134.0
17 TraesCS5B01G501200 chr2A 84.428 1066 90 37 4667 5691 759834937 759833907 0.000000e+00 979.0
18 TraesCS5B01G501200 chr2A 85.972 499 61 5 1918 2412 759844431 759843938 7.820000e-145 525.0
19 TraesCS5B01G501200 chr2A 89.461 408 41 1 1905 2310 759841258 759840851 1.690000e-141 514.0
20 TraesCS5B01G501200 chr2A 91.020 245 18 4 2664 2906 759843936 759843694 2.370000e-85 327.0
21 TraesCS5B01G501200 chr2A 91.667 96 8 0 1598 1693 759836415 759836320 5.530000e-27 134.0
22 TraesCS5B01G501200 chr2A 84.426 122 17 2 2648 2769 759864361 759864242 1.550000e-22 119.0
23 TraesCS5B01G501200 chr2A 92.857 70 4 1 538 606 465346041 465345972 5.610000e-17 100.0
24 TraesCS5B01G501200 chr2A 89.474 76 8 0 2 77 1592804 1592879 7.260000e-16 97.1
25 TraesCS5B01G501200 chrUn 84.297 917 85 18 3434 4317 31785116 31786006 0.000000e+00 841.0
26 TraesCS5B01G501200 chrUn 88.608 395 42 2 1918 2310 31753658 31754051 2.220000e-130 477.0
27 TraesCS5B01G501200 chrUn 89.017 346 34 3 1918 2260 31863204 31863548 8.150000e-115 425.0
28 TraesCS5B01G501200 chrUn 83.934 361 47 8 4586 4944 237260828 237261179 1.410000e-87 335.0
29 TraesCS5B01G501200 chrUn 83.934 361 47 8 4586 4944 411381077 411380726 1.410000e-87 335.0
30 TraesCS5B01G501200 chrUn 83.934 361 47 8 4586 4944 451171849 451172200 1.410000e-87 335.0
31 TraesCS5B01G501200 chrUn 83.934 361 47 8 4586 4944 468173973 468174324 1.410000e-87 335.0
32 TraesCS5B01G501200 chrUn 85.252 278 32 5 1598 1870 31860127 31860400 2.420000e-70 278.0
33 TraesCS5B01G501200 chrUn 91.026 78 7 0 4352 4429 31786003 31786080 1.210000e-18 106.0
34 TraesCS5B01G501200 chr2B 84.362 729 68 16 3434 4142 775055147 775055849 0.000000e+00 673.0
35 TraesCS5B01G501200 chr2B 83.202 762 66 19 4952 5691 775164095 775164816 7.440000e-180 641.0
36 TraesCS5B01G501200 chr2B 86.879 503 55 8 1918 2412 775139899 775140398 3.590000e-153 553.0
37 TraesCS5B01G501200 chr2B 82.172 617 91 12 2 606 345458809 345458200 6.080000e-141 512.0
38 TraesCS5B01G501200 chr2B 82.423 586 63 12 4119 4699 775163134 775163684 7.980000e-130 475.0
39 TraesCS5B01G501200 chr2B 88.354 395 43 2 1918 2310 775158350 775158743 1.030000e-128 472.0
40 TraesCS5B01G501200 chr2B 89.103 312 31 2 2595 2904 775053635 775053945 1.380000e-102 385.0
41 TraesCS5B01G501200 chr2B 87.891 256 28 3 2653 2906 775140387 775140641 1.850000e-76 298.0
42 TraesCS5B01G501200 chr4B 93.392 454 29 1 4027 4479 503739462 503739915 0.000000e+00 671.0
43 TraesCS5B01G501200 chr4B 82.700 237 28 4 1076 1304 20345789 20345558 1.940000e-46 198.0
44 TraesCS5B01G501200 chr1B 82.391 619 94 7 2 606 286952825 286952208 7.820000e-145 525.0
45 TraesCS5B01G501200 chr1B 80.000 120 20 4 488 606 596928852 596928968 1.570000e-12 86.1
46 TraesCS5B01G501200 chr7D 78.930 617 87 20 2 606 45538131 45538716 6.440000e-101 379.0
47 TraesCS5B01G501200 chr7D 83.934 361 47 8 4586 4944 382032771 382033122 1.410000e-87 335.0
48 TraesCS5B01G501200 chr7D 83.934 361 47 8 4586 4944 579012594 579012243 1.410000e-87 335.0
49 TraesCS5B01G501200 chr7D 83.966 237 26 3 1076 1304 27353213 27352981 5.340000e-52 217.0
50 TraesCS5B01G501200 chr7D 84.416 231 24 3 1073 1295 39863617 39863843 5.340000e-52 217.0
51 TraesCS5B01G501200 chr7D 83.544 237 27 3 1076 1304 597514432 597514200 2.490000e-50 211.0
52 TraesCS5B01G501200 chr6B 78.218 606 96 21 11 606 634912952 634913531 1.090000e-93 355.0
53 TraesCS5B01G501200 chr6B 95.082 183 8 1 8607 8788 534918759 534918941 4.010000e-73 287.0
54 TraesCS5B01G501200 chr6A 82.787 366 52 8 50 406 117142075 117141712 5.120000e-82 316.0
55 TraesCS5B01G501200 chr6A 96.491 57 2 0 7484 7540 466295361 466295417 2.610000e-15 95.3
56 TraesCS5B01G501200 chr1D 82.336 351 53 6 2 346 200459722 200460069 6.670000e-76 296.0
57 TraesCS5B01G501200 chr1D 83.983 231 25 3 1073 1295 422494989 422495215 2.490000e-50 211.0
58 TraesCS5B01G501200 chr3B 94.444 180 9 1 8610 8788 662495465 662495286 8.690000e-70 276.0
59 TraesCS5B01G501200 chr3B 93.333 180 11 1 8607 8785 685122637 685122816 1.880000e-66 265.0
60 TraesCS5B01G501200 chr3B 79.012 243 34 14 374 606 762393295 762393060 5.500000e-32 150.0
61 TraesCS5B01G501200 chr4A 76.908 498 78 18 134 603 701965869 701965381 1.890000e-61 248.0
62 TraesCS5B01G501200 chr4A 83.550 231 26 3 1073 1295 592506766 592506992 1.160000e-48 206.0
63 TraesCS5B01G501200 chr4A 83.260 227 26 3 1076 1294 591538346 591538124 1.940000e-46 198.0
64 TraesCS5B01G501200 chr4A 80.508 236 41 4 79 312 433914462 433914230 9.070000e-40 176.0
65 TraesCS5B01G501200 chr4A 81.897 116 16 5 512 623 621774011 621774125 9.390000e-15 93.5
66 TraesCS5B01G501200 chr3D 76.190 189 25 13 7996 8172 396644098 396643918 2.030000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G501200 chr5B 668466268 668475055 8787 False 16229.000000 16229 100.000000 1 8788 1 chr5B.!!$F1 8787
1 TraesCS5B01G501200 chr5D 529533630 529541847 8217 False 4193.666667 10835 94.669667 646 8548 3 chr5D.!!$F1 7902
2 TraesCS5B01G501200 chr5A 657540565 657548580 8015 False 3861.333333 8255 92.181333 624 8502 3 chr5A.!!$F2 7878
3 TraesCS5B01G501200 chr5A 10829079 10829695 616 False 553.000000 553 83.253000 2 606 1 chr5A.!!$F1 604
4 TraesCS5B01G501200 chr2D 631930611 631933678 3067 False 559.000000 1064 86.779000 1598 5691 3 chr2D.!!$F3 4093
5 TraesCS5B01G501200 chr2D 558377163 558377800 637 True 501.000000 501 81.250000 2 625 1 chr2D.!!$R1 623
6 TraesCS5B01G501200 chr2A 759833907 759836415 2508 True 556.500000 979 88.047500 1598 5691 2 chr2A.!!$R3 4093
7 TraesCS5B01G501200 chr2A 759840851 759844431 3580 True 455.333333 525 88.817667 1905 2906 3 chr2A.!!$R4 1001
8 TraesCS5B01G501200 chrUn 31785116 31786080 964 False 473.500000 841 87.661500 3434 4429 2 chrUn.!!$F5 995
9 TraesCS5B01G501200 chrUn 31860127 31863548 3421 False 351.500000 425 87.134500 1598 2260 2 chrUn.!!$F6 662
10 TraesCS5B01G501200 chr2B 775163134 775164816 1682 False 558.000000 641 82.812500 4119 5691 2 chr2B.!!$F4 1572
11 TraesCS5B01G501200 chr2B 775053635 775055849 2214 False 529.000000 673 86.732500 2595 4142 2 chr2B.!!$F2 1547
12 TraesCS5B01G501200 chr2B 345458200 345458809 609 True 512.000000 512 82.172000 2 606 1 chr2B.!!$R1 604
13 TraesCS5B01G501200 chr2B 775139899 775140641 742 False 425.500000 553 87.385000 1918 2906 2 chr2B.!!$F3 988
14 TraesCS5B01G501200 chr1B 286952208 286952825 617 True 525.000000 525 82.391000 2 606 1 chr1B.!!$R1 604
15 TraesCS5B01G501200 chr7D 45538131 45538716 585 False 379.000000 379 78.930000 2 606 1 chr7D.!!$F2 604
16 TraesCS5B01G501200 chr6B 634912952 634913531 579 False 355.000000 355 78.218000 11 606 1 chr6B.!!$F2 595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
233 235 0.026803 GAATGGCAGATTCGTCACGC 59.973 55.000 0.00 0.00 0.00 5.34 F
530 540 0.178068 AGTAAGGTATGTGCAGGGCG 59.822 55.000 0.00 0.00 0.00 6.13 F
543 553 0.181114 CAGGGCGGATGAAAGATCCA 59.819 55.000 0.00 0.00 38.08 3.41 F
544 554 1.143813 AGGGCGGATGAAAGATCCAT 58.856 50.000 0.00 0.00 38.08 3.41 F
1296 1498 1.212751 GGCGTGAACCATTTCCTGC 59.787 57.895 0.00 0.00 32.67 4.85 F
2418 2801 0.686789 TATGTGCACACCTGCTGACT 59.313 50.000 24.37 5.25 44.57 3.41 F
3964 5491 1.275505 GTAGGCTTCGCGGAAGTTAC 58.724 55.000 6.13 11.38 41.27 2.50 F
4419 6067 0.108472 TGAGCTGCAGTCATCCGAAG 60.108 55.000 16.64 0.00 0.00 3.79 F
4813 6504 0.599558 TCGACCCCAGTAAGTGAACG 59.400 55.000 0.00 0.00 0.00 3.95 F
5374 8334 1.070909 CAAAATTTCCAACCGCAACGC 60.071 47.619 0.00 0.00 0.00 4.84 F
6069 9148 1.225426 GCTGAGATCCATGCACCCA 59.775 57.895 0.00 0.00 0.00 4.51 F
7410 10527 0.779997 AGCCCAAAACCTCACCTGAT 59.220 50.000 0.00 0.00 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1896 2267 0.034337 GTCGTAGGCCTCACAACCAA 59.966 55.000 9.68 0.0 0.00 3.67 R
1897 2268 1.669440 GTCGTAGGCCTCACAACCA 59.331 57.895 9.68 0.0 0.00 3.67 R
2146 2520 2.159142 AGCAGCAAAAGCATTAGCATCC 60.159 45.455 0.00 0.0 45.49 3.51 R
2418 2801 2.428530 TGTGTGCTTGTACCATTTGCAA 59.571 40.909 0.00 0.0 35.34 4.08 R
3050 4359 1.457346 CTAAGGCAGCAACTGGAAGG 58.543 55.000 0.00 0.0 39.30 3.46 R
4043 5588 0.404040 TGGTGGGGGATCAAGACAAC 59.596 55.000 0.00 0.0 0.00 3.32 R
5053 6887 5.783111 AGGAAATCACAAATAAACTGGCAC 58.217 37.500 0.00 0.0 0.00 5.01 R
6068 9147 3.775661 TTGATGTCTGCTGCAATGATG 57.224 42.857 3.02 0.0 0.00 3.07 R
6571 9651 1.202582 ACAGTAGGTCGCTGTCATCAC 59.797 52.381 0.00 0.0 42.90 3.06 R
6871 9951 5.070446 TGTCTTTAGGAGCAGAGAAGAAACA 59.930 40.000 0.00 0.0 0.00 2.83 R
7760 11001 0.938713 TGTTGTTCCGCGAAAACGAT 59.061 45.000 8.23 0.0 34.06 3.73 R
8746 12040 0.047802 ATCAGGGGGAAGATGGGGAA 59.952 55.000 0.00 0.0 0.00 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 28 7.540400 CGTTAGTGCATAATGAAAATGTCCAAA 59.460 33.333 0.00 0.00 32.89 3.28
33 35 8.655970 GCATAATGAAAATGTCCAAAAACCTAC 58.344 33.333 0.00 0.00 0.00 3.18
65 67 5.159209 CAATGACAATCAGAGCTTTGGTTC 58.841 41.667 0.00 0.00 0.00 3.62
90 92 7.769507 TCCTAACTATACTATAGCGAGTGATGG 59.230 40.741 0.00 4.91 0.00 3.51
116 118 1.079197 ACGATCAAGCGACATGGCA 60.079 52.632 0.00 0.00 34.64 4.92
132 134 1.216678 TGGCAGGGAAAGACAAAGGAA 59.783 47.619 0.00 0.00 0.00 3.36
136 138 3.321968 GCAGGGAAAGACAAAGGAACAAT 59.678 43.478 0.00 0.00 0.00 2.71
167 169 3.704061 GCTAAACATGGATGGGGCTTTTA 59.296 43.478 0.00 0.00 0.00 1.52
186 188 6.183360 GCTTTTAACCCAAACTTACTCAAGGT 60.183 38.462 0.00 0.00 35.97 3.50
202 204 2.034104 AGGTCTCGTATGACGCTGTA 57.966 50.000 0.00 0.00 42.21 2.74
209 211 4.515567 TCTCGTATGACGCTGTAATCAGAT 59.484 41.667 0.00 0.00 42.21 2.90
233 235 0.026803 GAATGGCAGATTCGTCACGC 59.973 55.000 0.00 0.00 0.00 5.34
254 256 3.299503 CCAGGAAATGGGGAAATCGATT 58.700 45.455 4.39 4.39 46.36 3.34
262 264 1.756538 GGGGAAATCGATTTGGTGCAT 59.243 47.619 27.27 1.65 0.00 3.96
296 299 1.080093 CGAGGCACTGGCTTTACGA 60.080 57.895 6.56 0.00 41.55 3.43
318 325 4.503741 TTTGGTCTCAATTTGCTACAGC 57.496 40.909 0.00 0.00 35.63 4.40
324 331 2.821969 CTCAATTTGCTACAGCCAGGTT 59.178 45.455 0.00 0.00 41.18 3.50
332 339 0.688487 TACAGCCAGGTTTAACCGCT 59.312 50.000 8.63 9.44 44.90 5.52
340 347 3.196254 CCAGGTTTAACCGCTTAGAGGTA 59.804 47.826 8.30 0.00 44.90 3.08
366 373 5.069251 ACTCCGATAACTTCAAGGTGATAGG 59.931 44.000 0.00 0.00 0.00 2.57
380 387 7.127186 TCAAGGTGATAGGGACAATGAAGAATA 59.873 37.037 0.00 0.00 0.00 1.75
381 388 7.639062 AGGTGATAGGGACAATGAAGAATAT 57.361 36.000 0.00 0.00 0.00 1.28
404 414 1.065701 GCTGCTCTTTCGGTCTATCGA 59.934 52.381 0.00 0.00 37.38 3.59
406 416 2.089201 TGCTCTTTCGGTCTATCGACA 58.911 47.619 0.00 0.00 42.05 4.35
412 422 4.696877 TCTTTCGGTCTATCGACAACAGTA 59.303 41.667 0.00 0.00 42.05 2.74
414 424 6.539826 TCTTTCGGTCTATCGACAACAGTATA 59.460 38.462 0.00 0.00 42.05 1.47
416 426 7.967890 TTCGGTCTATCGACAACAGTATATA 57.032 36.000 0.00 0.00 42.05 0.86
417 427 8.557592 TTCGGTCTATCGACAACAGTATATAT 57.442 34.615 0.00 0.00 42.05 0.86
418 428 9.657419 TTCGGTCTATCGACAACAGTATATATA 57.343 33.333 0.00 0.00 42.05 0.86
419 429 9.828039 TCGGTCTATCGACAACAGTATATATAT 57.172 33.333 0.00 0.00 42.05 0.86
441 451 6.949352 ATATACCTTGCCTGTGATTTTCTG 57.051 37.500 0.00 0.00 0.00 3.02
442 452 1.615392 ACCTTGCCTGTGATTTTCTGC 59.385 47.619 0.00 0.00 0.00 4.26
443 453 1.614903 CCTTGCCTGTGATTTTCTGCA 59.385 47.619 0.00 0.00 0.00 4.41
444 454 2.232941 CCTTGCCTGTGATTTTCTGCAT 59.767 45.455 0.00 0.00 0.00 3.96
445 455 3.444742 CCTTGCCTGTGATTTTCTGCATA 59.555 43.478 0.00 0.00 0.00 3.14
446 456 4.098960 CCTTGCCTGTGATTTTCTGCATAT 59.901 41.667 0.00 0.00 0.00 1.78
447 457 5.394883 CCTTGCCTGTGATTTTCTGCATATT 60.395 40.000 0.00 0.00 0.00 1.28
448 458 6.183360 CCTTGCCTGTGATTTTCTGCATATTA 60.183 38.462 0.00 0.00 0.00 0.98
449 459 6.964807 TGCCTGTGATTTTCTGCATATTAT 57.035 33.333 0.00 0.00 0.00 1.28
450 460 7.350744 TGCCTGTGATTTTCTGCATATTATT 57.649 32.000 0.00 0.00 0.00 1.40
451 461 7.784037 TGCCTGTGATTTTCTGCATATTATTT 58.216 30.769 0.00 0.00 0.00 1.40
452 462 8.259411 TGCCTGTGATTTTCTGCATATTATTTT 58.741 29.630 0.00 0.00 0.00 1.82
453 463 9.101655 GCCTGTGATTTTCTGCATATTATTTTT 57.898 29.630 0.00 0.00 0.00 1.94
484 494 6.642707 CTCCTAGGGAGTCTAATTGTACTG 57.357 45.833 9.46 0.00 44.25 2.74
485 495 4.894114 TCCTAGGGAGTCTAATTGTACTGC 59.106 45.833 9.46 5.34 33.70 4.40
487 497 3.195471 GGGAGTCTAATTGTACTGCCC 57.805 52.381 16.86 13.50 45.61 5.36
488 498 2.504175 GGGAGTCTAATTGTACTGCCCA 59.496 50.000 16.86 0.00 45.61 5.36
489 499 3.136626 GGGAGTCTAATTGTACTGCCCAT 59.863 47.826 16.86 0.00 45.61 4.00
490 500 4.130118 GGAGTCTAATTGTACTGCCCATG 58.870 47.826 0.00 0.00 0.00 3.66
491 501 4.141711 GGAGTCTAATTGTACTGCCCATGA 60.142 45.833 0.00 0.00 0.00 3.07
492 502 5.455326 GGAGTCTAATTGTACTGCCCATGAT 60.455 44.000 0.00 0.00 0.00 2.45
493 503 6.006275 AGTCTAATTGTACTGCCCATGATT 57.994 37.500 0.00 0.00 0.00 2.57
494 504 6.426587 AGTCTAATTGTACTGCCCATGATTT 58.573 36.000 0.00 0.00 0.00 2.17
495 505 7.573710 AGTCTAATTGTACTGCCCATGATTTA 58.426 34.615 0.00 0.00 0.00 1.40
496 506 7.716998 AGTCTAATTGTACTGCCCATGATTTAG 59.283 37.037 0.00 0.00 0.00 1.85
497 507 5.520376 AATTGTACTGCCCATGATTTAGC 57.480 39.130 0.00 0.00 0.00 3.09
498 508 2.930950 TGTACTGCCCATGATTTAGCC 58.069 47.619 0.00 0.00 0.00 3.93
499 509 2.240921 TGTACTGCCCATGATTTAGCCA 59.759 45.455 0.00 0.00 0.00 4.75
500 510 2.530460 ACTGCCCATGATTTAGCCAA 57.470 45.000 0.00 0.00 0.00 4.52
501 511 2.818921 ACTGCCCATGATTTAGCCAAA 58.181 42.857 0.00 0.00 0.00 3.28
502 512 2.762327 ACTGCCCATGATTTAGCCAAAG 59.238 45.455 0.00 0.00 0.00 2.77
503 513 2.762327 CTGCCCATGATTTAGCCAAAGT 59.238 45.455 0.00 0.00 0.00 2.66
504 514 3.953612 CTGCCCATGATTTAGCCAAAGTA 59.046 43.478 0.00 0.00 0.00 2.24
505 515 3.953612 TGCCCATGATTTAGCCAAAGTAG 59.046 43.478 0.00 0.00 0.00 2.57
506 516 3.954258 GCCCATGATTTAGCCAAAGTAGT 59.046 43.478 0.00 0.00 0.00 2.73
507 517 4.402474 GCCCATGATTTAGCCAAAGTAGTT 59.598 41.667 0.00 0.00 0.00 2.24
508 518 5.592688 GCCCATGATTTAGCCAAAGTAGTTA 59.407 40.000 0.00 0.00 0.00 2.24
509 519 6.238759 GCCCATGATTTAGCCAAAGTAGTTAG 60.239 42.308 0.00 0.00 0.00 2.34
510 520 7.054124 CCCATGATTTAGCCAAAGTAGTTAGA 58.946 38.462 0.00 0.00 0.00 2.10
511 521 7.556275 CCCATGATTTAGCCAAAGTAGTTAGAA 59.444 37.037 0.00 0.00 0.00 2.10
512 522 8.616076 CCATGATTTAGCCAAAGTAGTTAGAAG 58.384 37.037 0.00 0.00 0.00 2.85
513 523 9.167311 CATGATTTAGCCAAAGTAGTTAGAAGT 57.833 33.333 0.00 0.00 0.00 3.01
517 527 9.668497 ATTTAGCCAAAGTAGTTAGAAGTAAGG 57.332 33.333 0.00 0.00 0.00 2.69
518 528 6.683312 AGCCAAAGTAGTTAGAAGTAAGGT 57.317 37.500 0.00 0.00 0.00 3.50
519 529 7.787623 AGCCAAAGTAGTTAGAAGTAAGGTA 57.212 36.000 0.00 0.00 0.00 3.08
520 530 8.376803 AGCCAAAGTAGTTAGAAGTAAGGTAT 57.623 34.615 0.00 0.00 0.00 2.73
521 531 8.258708 AGCCAAAGTAGTTAGAAGTAAGGTATG 58.741 37.037 0.00 0.00 0.00 2.39
522 532 8.039538 GCCAAAGTAGTTAGAAGTAAGGTATGT 58.960 37.037 0.00 0.00 0.00 2.29
523 533 9.367444 CCAAAGTAGTTAGAAGTAAGGTATGTG 57.633 37.037 0.00 0.00 0.00 3.21
524 534 8.870879 CAAAGTAGTTAGAAGTAAGGTATGTGC 58.129 37.037 0.00 0.00 0.00 4.57
525 535 7.713734 AGTAGTTAGAAGTAAGGTATGTGCA 57.286 36.000 0.00 0.00 0.00 4.57
526 536 7.773149 AGTAGTTAGAAGTAAGGTATGTGCAG 58.227 38.462 0.00 0.00 0.00 4.41
527 537 5.978814 AGTTAGAAGTAAGGTATGTGCAGG 58.021 41.667 0.00 0.00 0.00 4.85
528 538 3.914426 AGAAGTAAGGTATGTGCAGGG 57.086 47.619 0.00 0.00 0.00 4.45
529 539 2.092914 AGAAGTAAGGTATGTGCAGGGC 60.093 50.000 0.00 0.00 0.00 5.19
530 540 0.178068 AGTAAGGTATGTGCAGGGCG 59.822 55.000 0.00 0.00 0.00 6.13
531 541 0.814010 GTAAGGTATGTGCAGGGCGG 60.814 60.000 0.00 0.00 0.00 6.13
532 542 0.978667 TAAGGTATGTGCAGGGCGGA 60.979 55.000 0.00 0.00 0.00 5.54
533 543 1.635817 AAGGTATGTGCAGGGCGGAT 61.636 55.000 0.00 0.00 0.00 4.18
534 544 1.893808 GGTATGTGCAGGGCGGATG 60.894 63.158 0.00 0.00 0.00 3.51
535 545 1.146041 GTATGTGCAGGGCGGATGA 59.854 57.895 0.00 0.00 0.00 2.92
536 546 0.463654 GTATGTGCAGGGCGGATGAA 60.464 55.000 0.00 0.00 0.00 2.57
537 547 0.254462 TATGTGCAGGGCGGATGAAA 59.746 50.000 0.00 0.00 0.00 2.69
538 548 1.033746 ATGTGCAGGGCGGATGAAAG 61.034 55.000 0.00 0.00 0.00 2.62
539 549 1.377202 GTGCAGGGCGGATGAAAGA 60.377 57.895 0.00 0.00 0.00 2.52
540 550 0.749454 GTGCAGGGCGGATGAAAGAT 60.749 55.000 0.00 0.00 0.00 2.40
541 551 0.464373 TGCAGGGCGGATGAAAGATC 60.464 55.000 0.00 0.00 0.00 2.75
542 552 1.169034 GCAGGGCGGATGAAAGATCC 61.169 60.000 0.00 0.00 34.90 3.36
543 553 0.181114 CAGGGCGGATGAAAGATCCA 59.819 55.000 0.00 0.00 38.08 3.41
544 554 1.143813 AGGGCGGATGAAAGATCCAT 58.856 50.000 0.00 0.00 38.08 3.41
545 555 1.496429 AGGGCGGATGAAAGATCCATT 59.504 47.619 0.00 0.00 38.08 3.16
546 556 1.882623 GGGCGGATGAAAGATCCATTC 59.117 52.381 0.00 2.63 38.08 2.67
547 557 2.575532 GGCGGATGAAAGATCCATTCA 58.424 47.619 12.43 12.43 40.76 2.57
549 559 4.326826 GGCGGATGAAAGATCCATTCATA 58.673 43.478 19.05 0.00 45.11 2.15
550 560 4.761739 GGCGGATGAAAGATCCATTCATAA 59.238 41.667 19.05 0.00 45.11 1.90
551 561 5.241506 GGCGGATGAAAGATCCATTCATAAA 59.758 40.000 19.05 0.00 45.11 1.40
552 562 6.376978 GCGGATGAAAGATCCATTCATAAAG 58.623 40.000 19.05 14.97 45.11 1.85
553 563 6.205464 GCGGATGAAAGATCCATTCATAAAGA 59.795 38.462 19.05 0.00 45.11 2.52
554 564 7.094463 GCGGATGAAAGATCCATTCATAAAGAT 60.094 37.037 19.05 3.26 45.11 2.40
555 565 8.790718 CGGATGAAAGATCCATTCATAAAGATT 58.209 33.333 19.05 2.69 45.11 2.40
556 566 9.909644 GGATGAAAGATCCATTCATAAAGATTG 57.090 33.333 19.05 0.00 45.11 2.67
661 671 9.868277 TGTAAGTTAATTAATGCAAAATCCTGG 57.132 29.630 0.31 0.00 0.00 4.45
670 680 2.768527 TGCAAAATCCTGGTGAAAACCA 59.231 40.909 0.00 0.00 38.25 3.67
672 682 3.809279 GCAAAATCCTGGTGAAAACCAAG 59.191 43.478 0.00 0.00 39.61 3.61
687 697 5.796424 AAACCAAGAATCTGATTTGTGCT 57.204 34.783 4.11 0.00 0.00 4.40
725 736 4.035102 GGACCCACCAGTCAGGCC 62.035 72.222 0.00 0.00 43.14 5.19
727 738 3.252284 ACCCACCAGTCAGGCCAG 61.252 66.667 5.01 0.00 43.14 4.85
734 745 1.757306 CAGTCAGGCCAGTCACCTT 59.243 57.895 5.01 0.00 34.42 3.50
743 754 3.953775 AGTCACCTTGGGCCCACG 61.954 66.667 28.70 24.63 0.00 4.94
852 863 3.437795 TCGCTCCGAGTTCGTCCC 61.438 66.667 0.48 0.00 37.74 4.46
1192 1394 1.560292 CGCTCGCCGCTCTAAATTC 59.440 57.895 0.00 0.00 36.13 2.17
1270 1472 1.401670 CGTTTCTGCTAGTCTCGCTGT 60.402 52.381 0.00 0.00 0.00 4.40
1296 1498 1.212751 GGCGTGAACCATTTCCTGC 59.787 57.895 0.00 0.00 32.67 4.85
1304 1506 2.485122 CATTTCCTGCGCGGTTCC 59.515 61.111 16.49 0.00 0.00 3.62
1332 1534 1.261619 CTCGTTGCTGTTGTTGACCTC 59.738 52.381 0.00 0.00 0.00 3.85
1351 1553 4.097892 ACCTCAACCAGTTTGTTTGTGATC 59.902 41.667 0.00 0.00 36.49 2.92
1459 1661 8.862325 AACCACTGTATGATTTCTGTAATTGA 57.138 30.769 0.00 0.00 0.00 2.57
1523 1725 6.845302 TGACATTTCACATTGCTAGTTGATC 58.155 36.000 0.00 0.00 0.00 2.92
1524 1726 6.656270 TGACATTTCACATTGCTAGTTGATCT 59.344 34.615 0.00 0.00 0.00 2.75
1525 1727 7.823799 TGACATTTCACATTGCTAGTTGATCTA 59.176 33.333 0.00 0.00 0.00 1.98
1526 1728 8.743085 ACATTTCACATTGCTAGTTGATCTAT 57.257 30.769 0.00 0.00 0.00 1.98
1527 1729 9.836864 ACATTTCACATTGCTAGTTGATCTATA 57.163 29.630 0.00 0.00 0.00 1.31
1530 1732 8.893219 TTCACATTGCTAGTTGATCTATAAGG 57.107 34.615 0.00 0.00 0.00 2.69
1531 1733 8.023021 TCACATTGCTAGTTGATCTATAAGGT 57.977 34.615 0.00 0.00 0.00 3.50
1532 1734 7.928167 TCACATTGCTAGTTGATCTATAAGGTG 59.072 37.037 0.00 0.00 37.94 4.00
1533 1735 6.708054 ACATTGCTAGTTGATCTATAAGGTGC 59.292 38.462 0.00 0.00 0.00 5.01
1534 1736 5.869649 TGCTAGTTGATCTATAAGGTGCA 57.130 39.130 0.00 0.00 0.00 4.57
1535 1737 6.233905 TGCTAGTTGATCTATAAGGTGCAA 57.766 37.500 0.00 0.00 0.00 4.08
1536 1738 6.830912 TGCTAGTTGATCTATAAGGTGCAAT 58.169 36.000 0.00 0.00 0.00 3.56
1537 1739 6.707608 TGCTAGTTGATCTATAAGGTGCAATG 59.292 38.462 0.00 0.00 0.00 2.82
1538 1740 6.931281 GCTAGTTGATCTATAAGGTGCAATGA 59.069 38.462 0.00 0.00 0.00 2.57
1539 1741 7.442364 GCTAGTTGATCTATAAGGTGCAATGAA 59.558 37.037 0.00 0.00 0.00 2.57
1540 1742 7.559590 AGTTGATCTATAAGGTGCAATGAAC 57.440 36.000 0.00 0.00 0.00 3.18
1541 1743 7.341805 AGTTGATCTATAAGGTGCAATGAACT 58.658 34.615 0.00 0.00 0.00 3.01
1542 1744 7.497249 AGTTGATCTATAAGGTGCAATGAACTC 59.503 37.037 0.00 0.00 0.00 3.01
1543 1745 6.888105 TGATCTATAAGGTGCAATGAACTCA 58.112 36.000 0.00 0.00 0.00 3.41
1544 1746 7.512130 TGATCTATAAGGTGCAATGAACTCAT 58.488 34.615 0.00 0.00 38.41 2.90
1545 1747 7.658982 TGATCTATAAGGTGCAATGAACTCATC 59.341 37.037 0.00 0.00 35.10 2.92
1546 1748 6.888105 TCTATAAGGTGCAATGAACTCATCA 58.112 36.000 0.00 0.00 43.67 3.07
1630 1856 4.757149 GCTATTCCCAATCCTGATACACAC 59.243 45.833 0.00 0.00 0.00 3.82
1722 1952 4.623886 GCATGACCTCACCTATCAAACTGA 60.624 45.833 0.00 0.00 0.00 3.41
1727 1957 3.118592 CCTCACCTATCAAACTGAGGGAC 60.119 52.174 4.85 0.00 44.26 4.46
1731 1961 3.456277 ACCTATCAAACTGAGGGACCATC 59.544 47.826 0.00 0.00 34.41 3.51
1842 2213 2.951229 ACCACACCCAACCTAGAAAG 57.049 50.000 0.00 0.00 0.00 2.62
1892 2263 5.868801 TGAAAAGGTGAAAAACTCTTGCTTG 59.131 36.000 0.00 0.00 0.00 4.01
1893 2264 5.659440 AAAGGTGAAAAACTCTTGCTTGA 57.341 34.783 0.00 0.00 0.00 3.02
1894 2265 5.859205 AAGGTGAAAAACTCTTGCTTGAT 57.141 34.783 0.00 0.00 0.00 2.57
1895 2266 5.859205 AGGTGAAAAACTCTTGCTTGATT 57.141 34.783 0.00 0.00 0.00 2.57
1896 2267 6.225981 AGGTGAAAAACTCTTGCTTGATTT 57.774 33.333 0.00 0.00 0.00 2.17
1897 2268 6.643388 AGGTGAAAAACTCTTGCTTGATTTT 58.357 32.000 0.00 0.00 0.00 1.82
1898 2269 6.536224 AGGTGAAAAACTCTTGCTTGATTTTG 59.464 34.615 0.00 0.00 0.00 2.44
1899 2270 6.238184 GGTGAAAAACTCTTGCTTGATTTTGG 60.238 38.462 0.00 0.00 0.00 3.28
1900 2271 6.313658 GTGAAAAACTCTTGCTTGATTTTGGT 59.686 34.615 0.00 0.00 0.00 3.67
1913 2284 1.600023 TTTTGGTTGTGAGGCCTACG 58.400 50.000 4.42 0.00 0.00 3.51
1938 2309 6.896883 ACCAAAACCTAGTAAGAACTTCACT 58.103 36.000 0.00 0.00 37.15 3.41
2063 2435 2.211806 TGGCTTCTGCAAAATTGTTGC 58.788 42.857 4.51 4.51 45.11 4.17
2146 2520 9.833917 AGATATCATGTGGCATTAGATATCAAG 57.166 33.333 28.10 7.29 44.90 3.02
2377 2760 5.301555 AGAAGACTCCAACTTAAGTGAAGC 58.698 41.667 9.34 4.26 38.92 3.86
2378 2761 4.965200 AGACTCCAACTTAAGTGAAGCT 57.035 40.909 9.34 6.19 38.92 3.74
2418 2801 0.686789 TATGTGCACACCTGCTGACT 59.313 50.000 24.37 5.25 44.57 3.41
2452 2835 7.589954 GGTACAAGCACACAACTTAATTTAGTG 59.410 37.037 0.00 0.00 36.34 2.74
2472 2855 6.532988 AGTGATTTAGTTAGACCAGAGGAC 57.467 41.667 0.00 0.00 0.00 3.85
2482 2865 2.439507 AGACCAGAGGACATGTGTTGTT 59.560 45.455 1.15 0.00 39.18 2.83
2483 2866 2.808543 GACCAGAGGACATGTGTTGTTC 59.191 50.000 1.15 0.00 39.18 3.18
2485 2868 3.646162 ACCAGAGGACATGTGTTGTTCTA 59.354 43.478 1.15 0.00 44.72 2.10
2486 2869 4.102524 ACCAGAGGACATGTGTTGTTCTAA 59.897 41.667 1.15 0.00 44.72 2.10
2487 2870 4.692625 CCAGAGGACATGTGTTGTTCTAAG 59.307 45.833 1.15 0.00 44.72 2.18
2488 2871 5.300752 CAGAGGACATGTGTTGTTCTAAGT 58.699 41.667 1.15 0.00 44.72 2.24
2571 2954 5.726397 TGTACGGCTTGATGTATACACTTT 58.274 37.500 7.96 0.00 0.00 2.66
2622 3009 4.103357 GTGATGAAGATGCATTGTTGAGC 58.897 43.478 0.00 0.00 0.00 4.26
2742 3129 6.942576 TGCTTGAGAAGTTATTTAGCCTCTTT 59.057 34.615 0.00 0.00 0.00 2.52
3280 4591 9.167311 AGCTCTTTGTTACATATTCTCGAATTT 57.833 29.630 0.00 0.00 32.50 1.82
3705 5222 1.333177 TTGGCACGTTGGGCTAAATT 58.667 45.000 1.19 0.00 0.00 1.82
3788 5313 4.853007 CTTCTGAGGAATCTCACCCAAAT 58.147 43.478 0.00 0.00 44.39 2.32
3836 5361 3.386768 TCTTCAAAGGAACCTCAGTCG 57.613 47.619 0.00 0.00 0.00 4.18
3964 5491 1.275505 GTAGGCTTCGCGGAAGTTAC 58.724 55.000 6.13 11.38 41.27 2.50
4214 5848 9.559732 CACCAGTATGAGGATTGATAATGTTTA 57.440 33.333 0.00 0.00 39.69 2.01
4406 6054 3.377485 CCTTGAAACATCCATCTGAGCTG 59.623 47.826 0.00 0.00 0.00 4.24
4413 6061 1.201424 TCCATCTGAGCTGCAGTCAT 58.799 50.000 16.64 1.28 45.14 3.06
4419 6067 0.108472 TGAGCTGCAGTCATCCGAAG 60.108 55.000 16.64 0.00 0.00 3.79
4813 6504 0.599558 TCGACCCCAGTAAGTGAACG 59.400 55.000 0.00 0.00 0.00 3.95
4828 6519 5.294050 AGTGAACGTTTTTGTTCCGTTTA 57.706 34.783 0.46 0.00 46.04 2.01
4881 6572 6.616947 TGTTCTTGAGTTGGTTACTTTGTTG 58.383 36.000 0.00 0.00 37.17 3.33
5053 6887 6.556212 TGACTCGTAAATAAGAAGCTCTGAG 58.444 40.000 0.00 0.00 0.00 3.35
5072 6906 5.769662 TCTGAGTGCCAGTTTATTTGTGATT 59.230 36.000 0.00 0.00 43.38 2.57
5271 8220 9.797642 ATATCATGCTTGTTCCAGTAATGAATA 57.202 29.630 0.00 0.00 0.00 1.75
5272 8221 7.320443 TCATGCTTGTTCCAGTAATGAATAC 57.680 36.000 0.00 0.00 34.52 1.89
5374 8334 1.070909 CAAAATTTCCAACCGCAACGC 60.071 47.619 0.00 0.00 0.00 4.84
5789 8753 4.021632 TGAGCTGTCATCTCATATACTGCC 60.022 45.833 2.19 0.00 37.47 4.85
5856 8820 8.090214 TGTACAAGACCTGGTGTAAAGTATAAC 58.910 37.037 2.82 0.00 32.23 1.89
6068 9147 1.527844 GGCTGAGATCCATGCACCC 60.528 63.158 0.00 0.00 0.00 4.61
6069 9148 1.225426 GCTGAGATCCATGCACCCA 59.775 57.895 0.00 0.00 0.00 4.51
6529 9609 7.012421 AGCATCTTCGTCTTCTTTACTTTGTTT 59.988 33.333 0.00 0.00 0.00 2.83
6871 9951 2.145397 TTGGAGAGACCTCGTATGCT 57.855 50.000 0.00 0.00 40.33 3.79
6887 9967 2.175878 TGCTGTTTCTTCTCTGCTCC 57.824 50.000 0.00 0.00 0.00 4.70
7410 10527 0.779997 AGCCCAAAACCTCACCTGAT 59.220 50.000 0.00 0.00 0.00 2.90
7509 10750 2.478292 GGAATTACCAGGGAGACAGGA 58.522 52.381 0.00 0.00 38.79 3.86
7524 10765 1.162698 CAGGAGCATTGTGGTCAGTG 58.837 55.000 10.79 4.45 45.96 3.66
7670 10911 1.140252 ACCTTCCACGTGCACTACTTT 59.860 47.619 16.19 0.00 0.00 2.66
7688 10929 3.575687 ACTTTAAGCTGCTGAAATGGCTT 59.424 39.130 12.47 0.00 45.30 4.35
7719 10960 1.587547 GATGCTCGGGATGTTCCTTC 58.412 55.000 0.00 0.00 36.57 3.46
7791 11034 3.259064 CGGAACAACATCGATTAGTGGT 58.741 45.455 0.00 0.00 0.00 4.16
7795 11038 3.606687 ACAACATCGATTAGTGGTTCCC 58.393 45.455 0.00 0.00 0.00 3.97
7808 11051 4.697756 TTCCCGCGGTGAAGCAGG 62.698 66.667 26.12 5.84 36.06 4.85
7818 11061 2.156098 TGAAGCAGGTGAAGGGGCT 61.156 57.895 0.00 0.00 38.45 5.19
7841 11085 3.785859 GCCGGCTCTCCCATGACA 61.786 66.667 22.15 0.00 0.00 3.58
7860 11104 1.215647 GGACCTCTGCACACCGTAG 59.784 63.158 0.00 0.00 0.00 3.51
7863 11107 1.219124 CCTCTGCACACCGTAGCAT 59.781 57.895 0.00 0.00 40.42 3.79
7909 11153 5.191426 CACCATGAGATCAGAAATCCTGTT 58.809 41.667 0.00 0.00 43.38 3.16
7910 11154 5.296283 CACCATGAGATCAGAAATCCTGTTC 59.704 44.000 0.00 0.00 43.38 3.18
7917 11161 0.741221 AGAAATCCTGTTCGCCGCTC 60.741 55.000 0.00 0.00 32.50 5.03
8006 11253 7.093988 TGAGTTTTGAGGAAGAATTTTGTGACA 60.094 33.333 0.00 0.00 0.00 3.58
8007 11254 7.035612 AGTTTTGAGGAAGAATTTTGTGACAC 58.964 34.615 0.00 0.00 0.00 3.67
8064 11317 4.156008 GCTGTTCATCGTGACCCTATTTTT 59.844 41.667 0.00 0.00 0.00 1.94
8065 11318 5.673818 GCTGTTCATCGTGACCCTATTTTTC 60.674 44.000 0.00 0.00 0.00 2.29
8247 11500 3.641434 AACAGATGTCAGGGAATGAGG 57.359 47.619 0.00 0.00 39.07 3.86
8281 11534 6.242508 TGGCCTTTGTTGTTTTTGTTTTAC 57.757 33.333 3.32 0.00 0.00 2.01
8329 11619 1.337260 ACTTGCACCAGTCTCGATGTC 60.337 52.381 0.00 0.00 0.00 3.06
8382 11672 2.468831 GCGAATTCTCAGTCTAGCAGG 58.531 52.381 3.52 0.00 0.00 4.85
8385 11675 0.749649 ATTCTCAGTCTAGCAGGCCG 59.250 55.000 0.00 0.00 0.00 6.13
8387 11677 2.679996 TCAGTCTAGCAGGCCGCA 60.680 61.111 19.30 6.86 46.13 5.69
8423 11713 0.603975 GAGATGCTACCGGGGAATGC 60.604 60.000 6.32 2.75 0.00 3.56
8440 11730 3.855689 ATGCTGGAACCAATTTTCTCG 57.144 42.857 0.00 0.00 0.00 4.04
8510 11804 2.821969 AGTTCATAAGTGGCTTGGCTTG 59.178 45.455 0.00 0.00 0.00 4.01
8563 11857 4.845621 GCAATGGCAATGATGTTTGTAC 57.154 40.909 6.76 0.00 40.72 2.90
8564 11858 4.244066 GCAATGGCAATGATGTTTGTACA 58.756 39.130 6.76 0.00 40.72 2.90
8565 11859 4.689812 GCAATGGCAATGATGTTTGTACAA 59.310 37.500 6.76 3.59 37.67 2.41
8566 11860 5.178996 GCAATGGCAATGATGTTTGTACAAA 59.821 36.000 17.01 17.01 37.67 2.83
8567 11861 6.293298 GCAATGGCAATGATGTTTGTACAAAA 60.293 34.615 22.14 12.91 37.67 2.44
8568 11862 6.783892 ATGGCAATGATGTTTGTACAAAAC 57.216 33.333 22.14 15.94 37.91 2.43
8569 11863 5.664457 TGGCAATGATGTTTGTACAAAACA 58.336 33.333 22.14 20.30 43.33 2.83
8570 11864 5.521735 TGGCAATGATGTTTGTACAAAACAC 59.478 36.000 22.14 11.83 42.18 3.32
8571 11865 5.050431 GGCAATGATGTTTGTACAAAACACC 60.050 40.000 22.14 13.80 42.18 4.16
8572 11866 5.332205 GCAATGATGTTTGTACAAAACACCG 60.332 40.000 22.14 15.80 42.18 4.94
8573 11867 4.294416 TGATGTTTGTACAAAACACCGG 57.706 40.909 22.14 0.00 42.18 5.28
8574 11868 3.695060 TGATGTTTGTACAAAACACCGGT 59.305 39.130 22.14 0.00 42.18 5.28
8575 11869 3.761311 TGTTTGTACAAAACACCGGTC 57.239 42.857 22.14 8.28 38.00 4.79
8576 11870 3.079578 TGTTTGTACAAAACACCGGTCA 58.920 40.909 22.14 10.70 38.00 4.02
8577 11871 3.127203 TGTTTGTACAAAACACCGGTCAG 59.873 43.478 22.14 0.00 38.00 3.51
8578 11872 3.487879 GTTTGTACAAAACACCGGTCAGG 60.488 47.826 22.14 0.00 38.00 3.86
8579 11873 1.232119 GTACAAAACACCGGTCAGGG 58.768 55.000 2.59 0.00 46.96 4.45
8580 11874 0.838608 TACAAAACACCGGTCAGGGT 59.161 50.000 2.59 0.00 46.96 4.34
8581 11875 0.464916 ACAAAACACCGGTCAGGGTC 60.465 55.000 2.59 0.00 46.96 4.46
8582 11876 1.227734 AAAACACCGGTCAGGGTCG 60.228 57.895 2.59 0.00 46.96 4.79
8583 11877 3.819877 AAACACCGGTCAGGGTCGC 62.820 63.158 2.59 0.00 46.96 5.19
8585 11879 4.742201 CACCGGTCAGGGTCGCAG 62.742 72.222 2.59 0.00 46.96 5.18
8587 11881 4.003788 CCGGTCAGGGTCGCAGTT 62.004 66.667 0.00 0.00 35.97 3.16
8588 11882 2.030562 CGGTCAGGGTCGCAGTTT 59.969 61.111 0.00 0.00 0.00 2.66
8589 11883 2.027625 CGGTCAGGGTCGCAGTTTC 61.028 63.158 0.00 0.00 0.00 2.78
8590 11884 1.671379 GGTCAGGGTCGCAGTTTCC 60.671 63.158 0.00 0.00 0.00 3.13
8591 11885 1.070786 GTCAGGGTCGCAGTTTCCA 59.929 57.895 0.00 0.00 0.00 3.53
8592 11886 0.534203 GTCAGGGTCGCAGTTTCCAA 60.534 55.000 0.00 0.00 0.00 3.53
8593 11887 0.181587 TCAGGGTCGCAGTTTCCAAA 59.818 50.000 0.00 0.00 0.00 3.28
8594 11888 0.310854 CAGGGTCGCAGTTTCCAAAC 59.689 55.000 0.00 0.00 39.17 2.93
8603 11897 2.959507 AGTTTCCAAACTGCAACACC 57.040 45.000 3.84 0.00 46.80 4.16
8604 11898 2.175202 AGTTTCCAAACTGCAACACCA 58.825 42.857 3.84 0.00 46.80 4.17
8605 11899 2.564947 AGTTTCCAAACTGCAACACCAA 59.435 40.909 3.84 0.00 46.80 3.67
8606 11900 2.663826 TTCCAAACTGCAACACCAAC 57.336 45.000 0.00 0.00 0.00 3.77
8607 11901 0.453793 TCCAAACTGCAACACCAACG 59.546 50.000 0.00 0.00 0.00 4.10
8608 11902 0.172352 CCAAACTGCAACACCAACGT 59.828 50.000 0.00 0.00 0.00 3.99
8609 11903 1.402259 CCAAACTGCAACACCAACGTA 59.598 47.619 0.00 0.00 0.00 3.57
8610 11904 2.540769 CCAAACTGCAACACCAACGTAG 60.541 50.000 0.00 0.00 0.00 3.51
8611 11905 2.319136 AACTGCAACACCAACGTAGA 57.681 45.000 0.00 0.00 0.00 2.59
8612 11906 2.543777 ACTGCAACACCAACGTAGAT 57.456 45.000 0.00 0.00 0.00 1.98
8613 11907 2.846193 ACTGCAACACCAACGTAGATT 58.154 42.857 0.00 0.00 0.00 2.40
8614 11908 2.806244 ACTGCAACACCAACGTAGATTC 59.194 45.455 0.00 0.00 0.00 2.52
8615 11909 2.147958 TGCAACACCAACGTAGATTCC 58.852 47.619 0.00 0.00 0.00 3.01
8616 11910 2.147958 GCAACACCAACGTAGATTCCA 58.852 47.619 0.00 0.00 0.00 3.53
8617 11911 2.550606 GCAACACCAACGTAGATTCCAA 59.449 45.455 0.00 0.00 0.00 3.53
8618 11912 3.003897 GCAACACCAACGTAGATTCCAAA 59.996 43.478 0.00 0.00 0.00 3.28
8619 11913 4.498345 GCAACACCAACGTAGATTCCAAAA 60.498 41.667 0.00 0.00 0.00 2.44
8620 11914 5.768317 CAACACCAACGTAGATTCCAAAAT 58.232 37.500 0.00 0.00 0.00 1.82
8621 11915 6.212955 CAACACCAACGTAGATTCCAAAATT 58.787 36.000 0.00 0.00 0.00 1.82
8622 11916 6.399639 ACACCAACGTAGATTCCAAAATTT 57.600 33.333 0.00 0.00 0.00 1.82
8623 11917 6.811954 ACACCAACGTAGATTCCAAAATTTT 58.188 32.000 0.00 0.00 0.00 1.82
8624 11918 7.942990 ACACCAACGTAGATTCCAAAATTTTA 58.057 30.769 2.44 0.00 0.00 1.52
8625 11919 8.414778 ACACCAACGTAGATTCCAAAATTTTAA 58.585 29.630 2.44 0.00 0.00 1.52
8626 11920 8.696175 CACCAACGTAGATTCCAAAATTTTAAC 58.304 33.333 2.44 0.00 0.00 2.01
8627 11921 8.414778 ACCAACGTAGATTCCAAAATTTTAACA 58.585 29.630 2.44 0.00 0.00 2.41
8628 11922 8.911662 CCAACGTAGATTCCAAAATTTTAACAG 58.088 33.333 2.44 0.00 0.00 3.16
8629 11923 8.424731 CAACGTAGATTCCAAAATTTTAACAGC 58.575 33.333 2.44 0.00 0.00 4.40
8630 11924 6.799925 ACGTAGATTCCAAAATTTTAACAGCG 59.200 34.615 2.44 4.39 0.00 5.18
8631 11925 6.799925 CGTAGATTCCAAAATTTTAACAGCGT 59.200 34.615 2.44 0.00 0.00 5.07
8632 11926 7.958567 CGTAGATTCCAAAATTTTAACAGCGTA 59.041 33.333 2.44 0.00 0.00 4.42
8633 11927 9.274065 GTAGATTCCAAAATTTTAACAGCGTAG 57.726 33.333 2.44 0.00 0.00 3.51
8634 11928 7.312899 AGATTCCAAAATTTTAACAGCGTAGG 58.687 34.615 2.44 0.00 0.00 3.18
8635 11929 4.800784 TCCAAAATTTTAACAGCGTAGGC 58.199 39.130 2.44 0.00 40.37 3.93
8636 11930 4.278669 TCCAAAATTTTAACAGCGTAGGCA 59.721 37.500 10.48 0.00 43.41 4.75
8637 11931 4.621034 CCAAAATTTTAACAGCGTAGGCAG 59.379 41.667 10.48 4.02 43.41 4.85
8638 11932 5.219633 CAAAATTTTAACAGCGTAGGCAGT 58.780 37.500 10.48 4.75 41.04 4.40
8640 11934 5.447624 AATTTTAACAGCGTAGGCAGTTT 57.552 34.783 20.84 8.13 45.25 2.66
8641 11935 4.904253 TTTTAACAGCGTAGGCAGTTTT 57.096 36.364 20.84 3.33 45.25 2.43
8642 11936 6.563222 ATTTTAACAGCGTAGGCAGTTTTA 57.437 33.333 20.84 9.11 45.25 1.52
8643 11937 6.374565 TTTTAACAGCGTAGGCAGTTTTAA 57.625 33.333 20.84 13.59 45.25 1.52
8644 11938 3.891056 AACAGCGTAGGCAGTTTTAAC 57.109 42.857 11.82 0.00 45.25 2.01
8645 11939 2.148768 ACAGCGTAGGCAGTTTTAACC 58.851 47.619 10.48 0.00 43.41 2.85
8646 11940 1.467342 CAGCGTAGGCAGTTTTAACCC 59.533 52.381 10.48 0.00 43.41 4.11
8647 11941 0.806868 GCGTAGGCAGTTTTAACCCC 59.193 55.000 1.75 0.00 39.62 4.95
8648 11942 1.883209 GCGTAGGCAGTTTTAACCCCA 60.883 52.381 1.75 0.00 39.62 4.96
8649 11943 2.081462 CGTAGGCAGTTTTAACCCCAG 58.919 52.381 0.00 0.00 0.00 4.45
8650 11944 2.289819 CGTAGGCAGTTTTAACCCCAGA 60.290 50.000 0.00 0.00 0.00 3.86
8651 11945 3.758425 GTAGGCAGTTTTAACCCCAGAA 58.242 45.455 0.00 0.00 0.00 3.02
8652 11946 2.594131 AGGCAGTTTTAACCCCAGAAC 58.406 47.619 0.00 0.00 0.00 3.01
8653 11947 1.616865 GGCAGTTTTAACCCCAGAACC 59.383 52.381 0.00 0.00 0.00 3.62
8654 11948 1.616865 GCAGTTTTAACCCCAGAACCC 59.383 52.381 0.00 0.00 0.00 4.11
8655 11949 2.244695 CAGTTTTAACCCCAGAACCCC 58.755 52.381 0.00 0.00 0.00 4.95
8656 11950 2.149556 AGTTTTAACCCCAGAACCCCT 58.850 47.619 0.00 0.00 0.00 4.79
8657 11951 2.158370 AGTTTTAACCCCAGAACCCCTG 60.158 50.000 0.00 0.00 42.55 4.45
8675 11969 7.907841 ACCCCTGGTGGTTTTATTATTATTC 57.092 36.000 1.46 0.00 33.91 1.75
8676 11970 7.658260 ACCCCTGGTGGTTTTATTATTATTCT 58.342 34.615 1.46 0.00 33.91 2.40
8677 11971 8.126385 ACCCCTGGTGGTTTTATTATTATTCTT 58.874 33.333 1.46 0.00 33.91 2.52
8678 11972 8.638873 CCCCTGGTGGTTTTATTATTATTCTTC 58.361 37.037 0.00 0.00 0.00 2.87
8679 11973 8.638873 CCCTGGTGGTTTTATTATTATTCTTCC 58.361 37.037 0.00 0.00 0.00 3.46
8680 11974 9.421399 CCTGGTGGTTTTATTATTATTCTTCCT 57.579 33.333 0.00 0.00 0.00 3.36
8682 11976 9.416284 TGGTGGTTTTATTATTATTCTTCCTCC 57.584 33.333 0.00 0.00 0.00 4.30
8683 11977 8.857098 GGTGGTTTTATTATTATTCTTCCTCCC 58.143 37.037 0.00 0.00 0.00 4.30
8684 11978 9.416284 GTGGTTTTATTATTATTCTTCCTCCCA 57.584 33.333 0.00 0.00 0.00 4.37
8693 11987 9.853177 TTATTATTCTTCCTCCCATCTCTTTTC 57.147 33.333 0.00 0.00 0.00 2.29
8694 11988 7.516450 TTATTCTTCCTCCCATCTCTTTTCT 57.484 36.000 0.00 0.00 0.00 2.52
8695 11989 8.624019 TTATTCTTCCTCCCATCTCTTTTCTA 57.376 34.615 0.00 0.00 0.00 2.10
8696 11990 6.552445 TTCTTCCTCCCATCTCTTTTCTAG 57.448 41.667 0.00 0.00 0.00 2.43
8697 11991 5.843469 TCTTCCTCCCATCTCTTTTCTAGA 58.157 41.667 0.00 0.00 0.00 2.43
8698 11992 6.448202 TCTTCCTCCCATCTCTTTTCTAGAT 58.552 40.000 0.00 0.00 33.94 1.98
8699 11993 6.326064 TCTTCCTCCCATCTCTTTTCTAGATG 59.674 42.308 6.18 6.18 46.55 2.90
8724 12018 6.849085 AAAAAGCTCTCTGACTATCTCTCA 57.151 37.500 0.00 0.00 0.00 3.27
8725 12019 6.849085 AAAAGCTCTCTGACTATCTCTCAA 57.151 37.500 0.00 0.00 0.00 3.02
8726 12020 7.422465 AAAAGCTCTCTGACTATCTCTCAAT 57.578 36.000 0.00 0.00 0.00 2.57
8727 12021 6.639632 AAGCTCTCTGACTATCTCTCAATC 57.360 41.667 0.00 0.00 0.00 2.67
8728 12022 5.693961 AGCTCTCTGACTATCTCTCAATCA 58.306 41.667 0.00 0.00 0.00 2.57
8729 12023 6.309357 AGCTCTCTGACTATCTCTCAATCAT 58.691 40.000 0.00 0.00 0.00 2.45
8730 12024 6.432162 AGCTCTCTGACTATCTCTCAATCATC 59.568 42.308 0.00 0.00 0.00 2.92
8731 12025 6.207221 GCTCTCTGACTATCTCTCAATCATCA 59.793 42.308 0.00 0.00 0.00 3.07
8732 12026 7.094075 GCTCTCTGACTATCTCTCAATCATCAT 60.094 40.741 0.00 0.00 0.00 2.45
8733 12027 8.339344 TCTCTGACTATCTCTCAATCATCATC 57.661 38.462 0.00 0.00 0.00 2.92
8734 12028 7.394077 TCTCTGACTATCTCTCAATCATCATCC 59.606 40.741 0.00 0.00 0.00 3.51
8735 12029 7.240167 TCTGACTATCTCTCAATCATCATCCT 58.760 38.462 0.00 0.00 0.00 3.24
8736 12030 7.394077 TCTGACTATCTCTCAATCATCATCCTC 59.606 40.741 0.00 0.00 0.00 3.71
8737 12031 7.240167 TGACTATCTCTCAATCATCATCCTCT 58.760 38.462 0.00 0.00 0.00 3.69
8738 12032 7.394077 TGACTATCTCTCAATCATCATCCTCTC 59.606 40.741 0.00 0.00 0.00 3.20
8739 12033 7.472741 ACTATCTCTCAATCATCATCCTCTCT 58.527 38.462 0.00 0.00 0.00 3.10
8740 12034 8.613923 ACTATCTCTCAATCATCATCCTCTCTA 58.386 37.037 0.00 0.00 0.00 2.43
8741 12035 9.636789 CTATCTCTCAATCATCATCCTCTCTAT 57.363 37.037 0.00 0.00 0.00 1.98
8742 12036 7.943079 TCTCTCAATCATCATCCTCTCTATC 57.057 40.000 0.00 0.00 0.00 2.08
8743 12037 7.468496 TCTCTCAATCATCATCCTCTCTATCA 58.532 38.462 0.00 0.00 0.00 2.15
8744 12038 8.117312 TCTCTCAATCATCATCCTCTCTATCAT 58.883 37.037 0.00 0.00 0.00 2.45
8745 12039 8.296211 TCTCAATCATCATCCTCTCTATCATC 57.704 38.462 0.00 0.00 0.00 2.92
8746 12040 8.117312 TCTCAATCATCATCCTCTCTATCATCT 58.883 37.037 0.00 0.00 0.00 2.90
8747 12041 8.667592 TCAATCATCATCCTCTCTATCATCTT 57.332 34.615 0.00 0.00 0.00 2.40
8748 12042 8.751242 TCAATCATCATCCTCTCTATCATCTTC 58.249 37.037 0.00 0.00 0.00 2.87
8749 12043 7.664552 ATCATCATCCTCTCTATCATCTTCC 57.335 40.000 0.00 0.00 0.00 3.46
8750 12044 5.957168 TCATCATCCTCTCTATCATCTTCCC 59.043 44.000 0.00 0.00 0.00 3.97
8751 12045 4.682563 TCATCCTCTCTATCATCTTCCCC 58.317 47.826 0.00 0.00 0.00 4.81
8752 12046 4.108614 TCATCCTCTCTATCATCTTCCCCA 59.891 45.833 0.00 0.00 0.00 4.96
8753 12047 4.774243 TCCTCTCTATCATCTTCCCCAT 57.226 45.455 0.00 0.00 0.00 4.00
8754 12048 4.682563 TCCTCTCTATCATCTTCCCCATC 58.317 47.826 0.00 0.00 0.00 3.51
8755 12049 4.359528 TCCTCTCTATCATCTTCCCCATCT 59.640 45.833 0.00 0.00 0.00 2.90
8756 12050 5.092968 CCTCTCTATCATCTTCCCCATCTT 58.907 45.833 0.00 0.00 0.00 2.40
8757 12051 5.187576 CCTCTCTATCATCTTCCCCATCTTC 59.812 48.000 0.00 0.00 0.00 2.87
8758 12052 5.090139 TCTCTATCATCTTCCCCATCTTCC 58.910 45.833 0.00 0.00 0.00 3.46
8759 12053 4.171234 TCTATCATCTTCCCCATCTTCCC 58.829 47.826 0.00 0.00 0.00 3.97
8760 12054 1.522900 TCATCTTCCCCATCTTCCCC 58.477 55.000 0.00 0.00 0.00 4.81
8761 12055 0.480252 CATCTTCCCCATCTTCCCCC 59.520 60.000 0.00 0.00 0.00 5.40
8762 12056 0.351998 ATCTTCCCCATCTTCCCCCT 59.648 55.000 0.00 0.00 0.00 4.79
8763 12057 0.624500 TCTTCCCCATCTTCCCCCTG 60.625 60.000 0.00 0.00 0.00 4.45
8764 12058 0.624500 CTTCCCCATCTTCCCCCTGA 60.625 60.000 0.00 0.00 0.00 3.86
8765 12059 0.047802 TTCCCCATCTTCCCCCTGAT 59.952 55.000 0.00 0.00 0.00 2.90
8766 12060 0.401979 TCCCCATCTTCCCCCTGATC 60.402 60.000 0.00 0.00 0.00 2.92
8767 12061 0.402566 CCCCATCTTCCCCCTGATCT 60.403 60.000 0.00 0.00 0.00 2.75
8768 12062 1.132397 CCCCATCTTCCCCCTGATCTA 60.132 57.143 0.00 0.00 0.00 1.98
8769 12063 2.700225 CCCCATCTTCCCCCTGATCTAA 60.700 54.545 0.00 0.00 0.00 2.10
8770 12064 2.641815 CCCATCTTCCCCCTGATCTAAG 59.358 54.545 0.00 0.00 0.00 2.18
8771 12065 3.591789 CCATCTTCCCCCTGATCTAAGA 58.408 50.000 0.00 0.00 0.00 2.10
8772 12066 3.582208 CCATCTTCCCCCTGATCTAAGAG 59.418 52.174 0.00 0.00 30.30 2.85
8773 12067 4.487804 CATCTTCCCCCTGATCTAAGAGA 58.512 47.826 0.00 0.00 30.30 3.10
8774 12068 4.841813 TCTTCCCCCTGATCTAAGAGAT 57.158 45.455 0.00 0.00 37.73 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.550843 TGGACATTTTCATTATGCACTAACG 58.449 36.000 0.00 0.00 0.00 3.18
26 28 5.242434 TGTCATTGCTATGAACGTAGGTTT 58.758 37.500 12.50 0.00 42.23 3.27
33 35 5.723492 TCTGATTGTCATTGCTATGAACG 57.277 39.130 12.50 0.00 42.23 3.95
65 67 7.769507 TCCATCACTCGCTATAGTATAGTTAGG 59.230 40.741 16.76 8.70 0.00 2.69
90 92 1.076533 TCGCTTGATCGTCGCCTTTC 61.077 55.000 0.00 0.00 0.00 2.62
116 118 6.782494 ACATAATTGTTCCTTTGTCTTTCCCT 59.218 34.615 0.00 0.00 29.55 4.20
132 134 7.701539 TCCATGTTTAGCTTCACATAATTGT 57.298 32.000 9.50 0.00 36.15 2.71
136 138 5.593909 CCCATCCATGTTTAGCTTCACATAA 59.406 40.000 9.50 3.46 32.16 1.90
167 169 4.715713 GAGACCTTGAGTAAGTTTGGGTT 58.284 43.478 0.00 0.00 31.80 4.11
186 188 3.875134 TCTGATTACAGCGTCATACGAGA 59.125 43.478 3.22 0.00 44.57 4.04
202 204 6.204301 CGAATCTGCCATTCAAGTATCTGATT 59.796 38.462 0.00 0.00 0.00 2.57
209 211 3.932710 GTGACGAATCTGCCATTCAAGTA 59.067 43.478 0.00 0.00 0.00 2.24
233 235 2.435372 TCGATTTCCCCATTTCCTGG 57.565 50.000 0.00 0.00 45.51 4.45
262 264 1.270094 CCTCGGCCATAAACGCATCTA 60.270 52.381 2.24 0.00 0.00 1.98
270 272 1.077787 CCAGTGCCTCGGCCATAAA 60.078 57.895 2.24 0.00 41.09 1.40
290 293 6.325919 AGCAAATTGAGACCAAATCGTAAA 57.674 33.333 0.00 0.00 35.67 2.01
296 299 4.082026 GGCTGTAGCAAATTGAGACCAAAT 60.082 41.667 6.18 0.00 44.36 2.32
318 325 2.027469 ACCTCTAAGCGGTTAAACCTGG 60.027 50.000 8.61 8.42 35.66 4.45
324 331 4.380867 CGGAGTTTACCTCTAAGCGGTTAA 60.381 45.833 8.61 0.00 40.30 2.01
332 339 7.707624 TGAAGTTATCGGAGTTTACCTCTAA 57.292 36.000 0.00 0.00 40.30 2.10
340 347 5.223449 TCACCTTGAAGTTATCGGAGTTT 57.777 39.130 0.00 0.00 0.00 2.66
353 360 5.250543 TCTTCATTGTCCCTATCACCTTGAA 59.749 40.000 0.00 0.00 0.00 2.69
366 373 5.312079 AGCAGCCTATATTCTTCATTGTCC 58.688 41.667 0.00 0.00 0.00 4.02
380 387 1.490574 AGACCGAAAGAGCAGCCTAT 58.509 50.000 0.00 0.00 0.00 2.57
381 388 2.139323 TAGACCGAAAGAGCAGCCTA 57.861 50.000 0.00 0.00 0.00 3.93
416 426 7.175641 GCAGAAAATCACAGGCAAGGTATATAT 59.824 37.037 0.00 0.00 0.00 0.86
417 427 6.486657 GCAGAAAATCACAGGCAAGGTATATA 59.513 38.462 0.00 0.00 0.00 0.86
418 428 5.300286 GCAGAAAATCACAGGCAAGGTATAT 59.700 40.000 0.00 0.00 0.00 0.86
419 429 4.640201 GCAGAAAATCACAGGCAAGGTATA 59.360 41.667 0.00 0.00 0.00 1.47
420 430 3.445096 GCAGAAAATCACAGGCAAGGTAT 59.555 43.478 0.00 0.00 0.00 2.73
421 431 2.819608 GCAGAAAATCACAGGCAAGGTA 59.180 45.455 0.00 0.00 0.00 3.08
422 432 1.615392 GCAGAAAATCACAGGCAAGGT 59.385 47.619 0.00 0.00 0.00 3.50
423 433 1.614903 TGCAGAAAATCACAGGCAAGG 59.385 47.619 0.00 0.00 0.00 3.61
424 434 3.587797 ATGCAGAAAATCACAGGCAAG 57.412 42.857 0.00 0.00 34.64 4.01
425 435 5.664294 AATATGCAGAAAATCACAGGCAA 57.336 34.783 0.00 0.00 34.64 4.52
426 436 6.964807 ATAATATGCAGAAAATCACAGGCA 57.035 33.333 0.00 0.00 35.54 4.75
427 437 8.652810 AAAATAATATGCAGAAAATCACAGGC 57.347 30.769 0.00 0.00 0.00 4.85
450 460 4.156455 CTCCCTAGGAGCATGCTAAAAA 57.844 45.455 22.74 5.76 43.29 1.94
451 461 3.845781 CTCCCTAGGAGCATGCTAAAA 57.154 47.619 22.74 7.70 43.29 1.52
462 472 4.894114 GCAGTACAATTAGACTCCCTAGGA 59.106 45.833 11.48 0.00 0.00 2.94
463 473 4.039366 GGCAGTACAATTAGACTCCCTAGG 59.961 50.000 0.06 0.06 0.00 3.02
464 474 4.039366 GGGCAGTACAATTAGACTCCCTAG 59.961 50.000 0.00 0.00 33.59 3.02
465 475 3.965347 GGGCAGTACAATTAGACTCCCTA 59.035 47.826 0.00 0.00 33.59 3.53
466 476 2.772515 GGGCAGTACAATTAGACTCCCT 59.227 50.000 0.00 0.00 33.59 4.20
467 477 2.504175 TGGGCAGTACAATTAGACTCCC 59.496 50.000 13.76 13.76 35.37 4.30
468 478 3.906720 TGGGCAGTACAATTAGACTCC 57.093 47.619 0.00 0.00 0.00 3.85
469 479 5.023533 TCATGGGCAGTACAATTAGACTC 57.976 43.478 0.00 0.00 0.00 3.36
470 480 5.636903 ATCATGGGCAGTACAATTAGACT 57.363 39.130 0.00 0.00 0.00 3.24
471 481 6.699575 AAATCATGGGCAGTACAATTAGAC 57.300 37.500 0.00 0.00 0.00 2.59
472 482 6.486657 GCTAAATCATGGGCAGTACAATTAGA 59.513 38.462 0.00 0.00 0.00 2.10
473 483 6.294176 GGCTAAATCATGGGCAGTACAATTAG 60.294 42.308 0.00 0.00 0.00 1.73
474 484 5.534654 GGCTAAATCATGGGCAGTACAATTA 59.465 40.000 0.00 0.00 0.00 1.40
475 485 4.342092 GGCTAAATCATGGGCAGTACAATT 59.658 41.667 0.00 0.00 0.00 2.32
476 486 3.891366 GGCTAAATCATGGGCAGTACAAT 59.109 43.478 0.00 0.00 0.00 2.71
477 487 3.287222 GGCTAAATCATGGGCAGTACAA 58.713 45.455 0.00 0.00 0.00 2.41
478 488 2.240921 TGGCTAAATCATGGGCAGTACA 59.759 45.455 0.00 0.00 0.00 2.90
479 489 2.930950 TGGCTAAATCATGGGCAGTAC 58.069 47.619 0.00 0.00 0.00 2.73
480 490 3.660970 TTGGCTAAATCATGGGCAGTA 57.339 42.857 0.00 0.00 36.90 2.74
481 491 2.530460 TTGGCTAAATCATGGGCAGT 57.470 45.000 0.00 0.00 36.90 4.40
482 492 2.762327 ACTTTGGCTAAATCATGGGCAG 59.238 45.455 0.00 0.00 36.90 4.85
483 493 2.818921 ACTTTGGCTAAATCATGGGCA 58.181 42.857 0.00 0.00 0.00 5.36
484 494 3.954258 ACTACTTTGGCTAAATCATGGGC 59.046 43.478 0.00 0.00 0.00 5.36
485 495 7.054124 TCTAACTACTTTGGCTAAATCATGGG 58.946 38.462 0.00 0.00 0.00 4.00
486 496 8.506168 TTCTAACTACTTTGGCTAAATCATGG 57.494 34.615 0.00 0.00 0.00 3.66
487 497 9.167311 ACTTCTAACTACTTTGGCTAAATCATG 57.833 33.333 0.00 0.00 0.00 3.07
491 501 9.668497 CCTTACTTCTAACTACTTTGGCTAAAT 57.332 33.333 0.00 0.00 0.00 1.40
492 502 8.654094 ACCTTACTTCTAACTACTTTGGCTAAA 58.346 33.333 0.00 0.00 0.00 1.85
493 503 8.198807 ACCTTACTTCTAACTACTTTGGCTAA 57.801 34.615 0.00 0.00 0.00 3.09
494 504 7.787623 ACCTTACTTCTAACTACTTTGGCTA 57.212 36.000 0.00 0.00 0.00 3.93
495 505 6.683312 ACCTTACTTCTAACTACTTTGGCT 57.317 37.500 0.00 0.00 0.00 4.75
496 506 8.039538 ACATACCTTACTTCTAACTACTTTGGC 58.960 37.037 0.00 0.00 0.00 4.52
497 507 9.367444 CACATACCTTACTTCTAACTACTTTGG 57.633 37.037 0.00 0.00 0.00 3.28
498 508 8.870879 GCACATACCTTACTTCTAACTACTTTG 58.129 37.037 0.00 0.00 0.00 2.77
499 509 8.591072 TGCACATACCTTACTTCTAACTACTTT 58.409 33.333 0.00 0.00 0.00 2.66
500 510 8.130671 TGCACATACCTTACTTCTAACTACTT 57.869 34.615 0.00 0.00 0.00 2.24
501 511 7.147880 CCTGCACATACCTTACTTCTAACTACT 60.148 40.741 0.00 0.00 0.00 2.57
502 512 6.979238 CCTGCACATACCTTACTTCTAACTAC 59.021 42.308 0.00 0.00 0.00 2.73
503 513 6.097839 CCCTGCACATACCTTACTTCTAACTA 59.902 42.308 0.00 0.00 0.00 2.24
504 514 5.104900 CCCTGCACATACCTTACTTCTAACT 60.105 44.000 0.00 0.00 0.00 2.24
505 515 5.116882 CCCTGCACATACCTTACTTCTAAC 58.883 45.833 0.00 0.00 0.00 2.34
506 516 4.383770 GCCCTGCACATACCTTACTTCTAA 60.384 45.833 0.00 0.00 0.00 2.10
507 517 3.134081 GCCCTGCACATACCTTACTTCTA 59.866 47.826 0.00 0.00 0.00 2.10
508 518 2.092914 GCCCTGCACATACCTTACTTCT 60.093 50.000 0.00 0.00 0.00 2.85
509 519 2.289565 GCCCTGCACATACCTTACTTC 58.710 52.381 0.00 0.00 0.00 3.01
510 520 1.406887 CGCCCTGCACATACCTTACTT 60.407 52.381 0.00 0.00 0.00 2.24
511 521 0.178068 CGCCCTGCACATACCTTACT 59.822 55.000 0.00 0.00 0.00 2.24
512 522 0.814010 CCGCCCTGCACATACCTTAC 60.814 60.000 0.00 0.00 0.00 2.34
513 523 0.978667 TCCGCCCTGCACATACCTTA 60.979 55.000 0.00 0.00 0.00 2.69
514 524 1.635817 ATCCGCCCTGCACATACCTT 61.636 55.000 0.00 0.00 0.00 3.50
515 525 2.072487 ATCCGCCCTGCACATACCT 61.072 57.895 0.00 0.00 0.00 3.08
516 526 1.893808 CATCCGCCCTGCACATACC 60.894 63.158 0.00 0.00 0.00 2.73
517 527 0.463654 TTCATCCGCCCTGCACATAC 60.464 55.000 0.00 0.00 0.00 2.39
518 528 0.254462 TTTCATCCGCCCTGCACATA 59.746 50.000 0.00 0.00 0.00 2.29
519 529 1.001020 TTTCATCCGCCCTGCACAT 60.001 52.632 0.00 0.00 0.00 3.21
520 530 1.675310 CTTTCATCCGCCCTGCACA 60.675 57.895 0.00 0.00 0.00 4.57
521 531 0.749454 ATCTTTCATCCGCCCTGCAC 60.749 55.000 0.00 0.00 0.00 4.57
522 532 0.464373 GATCTTTCATCCGCCCTGCA 60.464 55.000 0.00 0.00 0.00 4.41
523 533 1.169034 GGATCTTTCATCCGCCCTGC 61.169 60.000 0.00 0.00 0.00 4.85
524 534 0.181114 TGGATCTTTCATCCGCCCTG 59.819 55.000 0.00 0.00 41.03 4.45
525 535 1.143813 ATGGATCTTTCATCCGCCCT 58.856 50.000 0.00 0.00 41.03 5.19
526 536 1.882623 GAATGGATCTTTCATCCGCCC 59.117 52.381 0.00 0.00 41.03 6.13
527 537 2.575532 TGAATGGATCTTTCATCCGCC 58.424 47.619 7.32 0.00 41.03 6.13
528 538 5.947228 TTATGAATGGATCTTTCATCCGC 57.053 39.130 20.45 1.49 41.62 5.54
529 539 7.734924 TCTTTATGAATGGATCTTTCATCCG 57.265 36.000 20.45 13.38 41.62 4.18
530 540 9.909644 CAATCTTTATGAATGGATCTTTCATCC 57.090 33.333 20.45 0.00 41.62 3.51
638 648 8.592809 TCACCAGGATTTTGCATTAATTAACTT 58.407 29.630 0.00 0.00 0.00 2.66
639 649 8.133024 TCACCAGGATTTTGCATTAATTAACT 57.867 30.769 0.00 0.00 0.00 2.24
641 651 9.784531 TTTTCACCAGGATTTTGCATTAATTAA 57.215 25.926 0.00 0.00 0.00 1.40
643 653 7.174772 GGTTTTCACCAGGATTTTGCATTAATT 59.825 33.333 0.00 0.00 43.61 1.40
644 654 6.654582 GGTTTTCACCAGGATTTTGCATTAAT 59.345 34.615 0.00 0.00 43.61 1.40
645 655 5.994668 GGTTTTCACCAGGATTTTGCATTAA 59.005 36.000 0.00 0.00 43.61 1.40
646 656 5.546526 GGTTTTCACCAGGATTTTGCATTA 58.453 37.500 0.00 0.00 43.61 1.90
647 657 4.388485 GGTTTTCACCAGGATTTTGCATT 58.612 39.130 0.00 0.00 43.61 3.56
648 658 4.006780 GGTTTTCACCAGGATTTTGCAT 57.993 40.909 0.00 0.00 43.61 3.96
649 659 3.467374 GGTTTTCACCAGGATTTTGCA 57.533 42.857 0.00 0.00 43.61 4.08
660 670 6.421801 CACAAATCAGATTCTTGGTTTTCACC 59.578 38.462 0.00 0.00 44.56 4.02
661 671 6.074142 GCACAAATCAGATTCTTGGTTTTCAC 60.074 38.462 0.00 0.00 29.18 3.18
670 680 5.163814 GCTTCGTAGCACAAATCAGATTCTT 60.164 40.000 9.38 0.00 46.95 2.52
672 682 4.582459 GCTTCGTAGCACAAATCAGATTC 58.418 43.478 9.38 0.00 46.95 2.52
687 697 1.592400 CTCACCCGGAGTGCTTCGTA 61.592 60.000 15.80 0.49 46.81 3.43
717 728 1.757306 CAAGGTGACTGGCCTGACT 59.243 57.895 17.64 5.92 42.68 3.41
725 736 2.282462 GTGGGCCCAAGGTGACTG 60.282 66.667 30.64 0.00 42.68 3.51
734 745 4.100084 CTCTGATGCGTGGGCCCA 62.100 66.667 24.45 24.45 38.85 5.36
743 754 1.774110 TGGTCTCCTCTCTCTGATGC 58.226 55.000 0.00 0.00 0.00 3.91
1074 1275 1.267832 CGGAACTTGTTGGTCGTGTTG 60.268 52.381 0.00 0.00 31.85 3.33
1113 1314 2.435693 GGGGTAGCCGAGCATGTCT 61.436 63.158 4.56 0.00 0.00 3.41
1177 1379 1.227147 CCCGAATTTAGAGCGGCGA 60.227 57.895 12.98 0.00 43.52 5.54
1178 1380 0.600255 ATCCCGAATTTAGAGCGGCG 60.600 55.000 0.51 0.51 43.52 6.46
1180 1382 1.419374 CGATCCCGAATTTAGAGCGG 58.581 55.000 0.00 0.00 44.42 5.52
1188 1390 1.040646 TCTAGCAGCGATCCCGAATT 58.959 50.000 0.00 0.00 38.22 2.17
1192 1394 4.878774 GATCTAGCAGCGATCCCG 57.121 61.111 0.00 0.00 32.94 5.14
1211 1413 3.564027 GATCGTTTCCGGCGCCAG 61.564 66.667 28.98 16.96 33.95 4.85
1212 1414 4.380781 TGATCGTTTCCGGCGCCA 62.381 61.111 28.98 4.32 33.95 5.69
1270 1472 0.250793 ATGGTTCACGCCAACGGATA 59.749 50.000 0.00 0.00 46.04 2.59
1296 1498 3.753070 GAGGCTACGAGGAACCGCG 62.753 68.421 14.63 14.63 44.41 6.46
1304 1506 0.388649 AACAGCAACGAGGCTACGAG 60.389 55.000 12.16 6.37 43.68 4.18
1488 1690 7.272084 GCAATGTGAAATGTCAATACTCAACTC 59.728 37.037 0.00 0.00 34.87 3.01
1499 1701 6.656270 AGATCAACTAGCAATGTGAAATGTCA 59.344 34.615 0.00 0.00 0.00 3.58
1523 1725 6.539826 TGTGATGAGTTCATTGCACCTTATAG 59.460 38.462 9.92 0.00 36.54 1.31
1524 1726 6.413892 TGTGATGAGTTCATTGCACCTTATA 58.586 36.000 9.92 0.00 36.54 0.98
1525 1727 5.255687 TGTGATGAGTTCATTGCACCTTAT 58.744 37.500 9.92 0.00 36.54 1.73
1526 1728 4.650734 TGTGATGAGTTCATTGCACCTTA 58.349 39.130 9.92 0.00 36.54 2.69
1527 1729 3.489355 TGTGATGAGTTCATTGCACCTT 58.511 40.909 9.92 0.00 36.54 3.50
1528 1730 3.144657 TGTGATGAGTTCATTGCACCT 57.855 42.857 9.92 0.00 36.54 4.00
1529 1731 3.693085 AGATGTGATGAGTTCATTGCACC 59.307 43.478 9.92 0.00 36.54 5.01
1530 1732 4.393990 TCAGATGTGATGAGTTCATTGCAC 59.606 41.667 6.88 6.88 36.54 4.57
1531 1733 4.581868 TCAGATGTGATGAGTTCATTGCA 58.418 39.130 0.00 0.00 36.54 4.08
1532 1734 5.330295 GTTCAGATGTGATGAGTTCATTGC 58.670 41.667 0.00 0.00 36.54 3.56
1533 1735 5.646793 AGGTTCAGATGTGATGAGTTCATTG 59.353 40.000 0.00 0.00 36.54 2.82
1534 1736 5.646793 CAGGTTCAGATGTGATGAGTTCATT 59.353 40.000 0.00 0.00 36.54 2.57
1535 1737 5.046087 TCAGGTTCAGATGTGATGAGTTCAT 60.046 40.000 0.00 0.00 36.54 2.57
1536 1738 4.284234 TCAGGTTCAGATGTGATGAGTTCA 59.716 41.667 0.00 0.00 30.85 3.18
1537 1739 4.825422 TCAGGTTCAGATGTGATGAGTTC 58.175 43.478 0.00 0.00 30.85 3.01
1538 1740 4.897509 TCAGGTTCAGATGTGATGAGTT 57.102 40.909 0.00 0.00 30.85 3.01
1539 1741 4.767478 CATCAGGTTCAGATGTGATGAGT 58.233 43.478 5.42 0.00 46.15 3.41
1630 1856 4.832248 TCATACTTAAGCAACCAGACCAG 58.168 43.478 1.29 0.00 0.00 4.00
1731 1961 1.612146 AAAAATTCCCCAGGGCCCG 60.612 57.895 18.44 11.67 34.68 6.13
1761 1991 2.158623 TGGGAACATGGGATATGAGCAC 60.159 50.000 0.00 0.00 33.40 4.40
1842 2213 8.510505 AGCTCACTATTTTGTCTTTTCATTCTC 58.489 33.333 0.00 0.00 0.00 2.87
1892 2263 2.161609 CGTAGGCCTCACAACCAAAATC 59.838 50.000 9.68 0.00 0.00 2.17
1893 2264 2.159382 CGTAGGCCTCACAACCAAAAT 58.841 47.619 9.68 0.00 0.00 1.82
1894 2265 1.141254 TCGTAGGCCTCACAACCAAAA 59.859 47.619 9.68 0.00 0.00 2.44
1895 2266 0.759959 TCGTAGGCCTCACAACCAAA 59.240 50.000 9.68 0.00 0.00 3.28
1896 2267 0.034337 GTCGTAGGCCTCACAACCAA 59.966 55.000 9.68 0.00 0.00 3.67
1897 2268 1.669440 GTCGTAGGCCTCACAACCA 59.331 57.895 9.68 0.00 0.00 3.67
1898 2269 4.592426 GTCGTAGGCCTCACAACC 57.408 61.111 9.68 0.00 0.00 3.77
1913 2284 6.990939 AGTGAAGTTCTTACTAGGTTTTGGTC 59.009 38.462 4.17 0.00 33.17 4.02
1938 2309 3.418995 ACTACACTTCTAAGAGGCGTCA 58.581 45.455 9.41 0.00 0.00 4.35
2063 2435 2.802415 CGAGATCAGCAGATGTTCCAGG 60.802 54.545 0.00 0.00 33.72 4.45
2146 2520 2.159142 AGCAGCAAAAGCATTAGCATCC 60.159 45.455 0.00 0.00 45.49 3.51
2377 2760 9.347240 ACATAAATCAGGTCATGGATAAAAGAG 57.653 33.333 0.00 0.00 0.00 2.85
2378 2761 9.123902 CACATAAATCAGGTCATGGATAAAAGA 57.876 33.333 0.00 0.00 0.00 2.52
2418 2801 2.428530 TGTGTGCTTGTACCATTTGCAA 59.571 40.909 0.00 0.00 35.34 4.08
2445 2828 9.268282 TCCTCTGGTCTAACTAAATCACTAAAT 57.732 33.333 0.00 0.00 0.00 1.40
2452 2835 6.758886 CACATGTCCTCTGGTCTAACTAAATC 59.241 42.308 0.00 0.00 0.00 2.17
2472 2855 7.490962 TGGTTAGAACTTAGAACAACACATG 57.509 36.000 0.00 0.00 0.00 3.21
2484 2867 9.674068 TGTAATGTGCATAATGGTTAGAACTTA 57.326 29.630 0.00 0.00 0.00 2.24
2485 2868 8.574251 TGTAATGTGCATAATGGTTAGAACTT 57.426 30.769 0.00 0.00 0.00 2.66
2486 2869 8.752005 ATGTAATGTGCATAATGGTTAGAACT 57.248 30.769 0.00 0.00 0.00 3.01
2525 2908 6.548622 ACAGATTGCTGACATTATTTGCCTAT 59.451 34.615 0.00 0.00 45.17 2.57
2742 3129 3.774766 ACCAGTGTGATACTAATGGCAGA 59.225 43.478 0.00 0.00 37.60 4.26
2943 4250 6.195600 TGTAAGCTAAAACCATATAGGGGG 57.804 41.667 8.55 0.00 43.89 5.40
2954 4261 6.198403 GCACTTTGGACTTTGTAAGCTAAAAC 59.802 38.462 0.00 0.00 0.00 2.43
3019 4326 5.585820 TGTGCATGCATCTGACATTTAAT 57.414 34.783 25.64 0.00 0.00 1.40
3050 4359 1.457346 CTAAGGCAGCAACTGGAAGG 58.543 55.000 0.00 0.00 39.30 3.46
3110 4419 8.961092 CACTATCACAACAAAAAGAAGTTCATG 58.039 33.333 5.50 1.45 0.00 3.07
3705 5222 2.376109 GGAACGGTCTACTGGATCAGA 58.624 52.381 0.00 0.00 35.18 3.27
3788 5313 5.875224 TCACCAACTGATTTGTCCTGAATA 58.125 37.500 0.00 0.00 32.71 1.75
3836 5361 7.412020 GGCATCAGATTATAAGCTAACTTACGC 60.412 40.741 2.30 0.34 41.12 4.42
4043 5588 0.404040 TGGTGGGGGATCAAGACAAC 59.596 55.000 0.00 0.00 0.00 3.32
4406 6054 1.401539 GGTTTTGCTTCGGATGACTGC 60.402 52.381 0.00 0.00 0.00 4.40
4413 6061 3.713826 AGGATTAGGTTTTGCTTCGGA 57.286 42.857 0.00 0.00 0.00 4.55
4419 6067 4.585879 TCAGTGGTAGGATTAGGTTTTGC 58.414 43.478 0.00 0.00 0.00 3.68
4706 6396 0.254178 CTCCCCACCAGGTCTCATTG 59.746 60.000 0.00 0.00 0.00 2.82
5053 6887 5.783111 AGGAAATCACAAATAAACTGGCAC 58.217 37.500 0.00 0.00 0.00 5.01
5374 8334 6.369890 ACAGGCAATATATAATGAAGTGCTCG 59.630 38.462 1.80 0.00 0.00 5.03
5777 8741 9.632807 GAGAGTTAAATGTAGGCAGTATATGAG 57.367 37.037 0.00 0.00 0.00 2.90
5789 8753 7.133513 CACTAGGCTACGAGAGTTAAATGTAG 58.866 42.308 0.00 0.00 46.40 2.74
6068 9147 3.775661 TTGATGTCTGCTGCAATGATG 57.224 42.857 3.02 0.00 0.00 3.07
6069 9148 3.951680 TCATTGATGTCTGCTGCAATGAT 59.048 39.130 15.40 0.00 46.71 2.45
6270 9349 4.657814 AAGAGACATGGGTTACATTGGT 57.342 40.909 0.00 0.00 37.84 3.67
6280 9359 8.303156 CAGAGTATAGATTGTAAGAGACATGGG 58.697 40.741 0.00 0.00 38.07 4.00
6476 9556 7.166970 GCGATAGAAATACGTCTGTGTGATAAA 59.833 37.037 0.00 0.00 39.76 1.40
6571 9651 1.202582 ACAGTAGGTCGCTGTCATCAC 59.797 52.381 0.00 0.00 42.90 3.06
6871 9951 5.070446 TGTCTTTAGGAGCAGAGAAGAAACA 59.930 40.000 0.00 0.00 0.00 2.83
6887 9967 7.226325 TCCAAAAATGCAACCAAATGTCTTTAG 59.774 33.333 0.00 0.00 0.00 1.85
7410 10527 9.411189 AGTTAGTAAAAGTATTTGGTTTGTCCA 57.589 29.630 0.00 0.00 45.60 4.02
7509 10750 2.105477 AGACTTCACTGACCACAATGCT 59.895 45.455 0.00 0.00 0.00 3.79
7524 10765 4.691216 GTGTCCTGGTTCATTGTAGACTTC 59.309 45.833 0.00 0.00 0.00 3.01
7670 10911 2.229543 CACAAGCCATTTCAGCAGCTTA 59.770 45.455 0.00 0.00 43.45 3.09
7688 10929 1.375908 GAGCATCGGCAGAACCACA 60.376 57.895 0.00 0.00 44.61 4.17
7760 11001 0.938713 TGTTGTTCCGCGAAAACGAT 59.061 45.000 8.23 0.00 34.06 3.73
7795 11038 2.664851 TTCACCTGCTTCACCGCG 60.665 61.111 0.00 0.00 0.00 6.46
7841 11085 1.228769 TACGGTGTGCAGAGGTCCT 60.229 57.895 0.00 0.00 0.00 3.85
7860 11104 4.971125 GCTCGCTCCCCGGTATGC 62.971 72.222 0.00 0.00 37.59 3.14
7917 11161 3.716872 ACTAGTTAACTGATGGATGGGGG 59.283 47.826 18.56 0.00 0.00 5.40
8037 11290 2.049526 TCACGATGAACAGCGCGT 60.050 55.556 8.43 0.00 45.05 6.01
8064 11317 5.714806 TGAGTACATACATCAGGTTGACAGA 59.285 40.000 0.00 0.00 0.00 3.41
8065 11318 5.965922 TGAGTACATACATCAGGTTGACAG 58.034 41.667 0.00 0.00 0.00 3.51
8185 11438 2.932614 CCAGCAGTTAAGAATCTGGACG 59.067 50.000 0.53 0.00 45.31 4.79
8228 11481 2.837947 TCCTCATTCCCTGACATCTGT 58.162 47.619 0.00 0.00 0.00 3.41
8247 11500 5.906073 ACAACAAAGGCCAGCATATATTTC 58.094 37.500 5.01 0.00 0.00 2.17
8299 11589 3.023832 ACTGGTGCAAGTATAAATGGGC 58.976 45.455 0.00 0.00 0.00 5.36
8329 11619 6.708054 AGTTGACTGAAAACAATCTGGTCTAG 59.292 38.462 0.00 0.00 0.00 2.43
8387 11677 3.599730 TCTCAGATCTCACGCACAAAT 57.400 42.857 0.00 0.00 0.00 2.32
8423 11713 4.757149 AGACTTCGAGAAAATTGGTTCCAG 59.243 41.667 0.00 0.00 0.00 3.86
8440 11730 6.937436 TTGACCCAAGAAAGTAAAGACTTC 57.063 37.500 0.00 0.00 45.50 3.01
8486 11780 3.519510 AGCCAAGCCACTTATGAACTCTA 59.480 43.478 0.00 0.00 0.00 2.43
8487 11781 2.307098 AGCCAAGCCACTTATGAACTCT 59.693 45.455 0.00 0.00 0.00 3.24
8548 11842 5.332205 CGGTGTTTTGTACAAACATCATTGC 60.332 40.000 20.43 8.73 40.33 3.56
8549 11843 5.174761 CCGGTGTTTTGTACAAACATCATTG 59.825 40.000 20.43 14.14 40.33 2.82
8550 11844 5.163499 ACCGGTGTTTTGTACAAACATCATT 60.163 36.000 20.43 8.87 40.33 2.57
8551 11845 4.339814 ACCGGTGTTTTGTACAAACATCAT 59.660 37.500 20.43 10.14 40.33 2.45
8552 11846 3.695060 ACCGGTGTTTTGTACAAACATCA 59.305 39.130 20.43 15.87 40.33 3.07
8553 11847 4.201930 TGACCGGTGTTTTGTACAAACATC 60.202 41.667 20.43 18.47 41.51 3.06
8554 11848 3.695060 TGACCGGTGTTTTGTACAAACAT 59.305 39.130 20.43 7.32 41.51 2.71
8555 11849 3.079578 TGACCGGTGTTTTGTACAAACA 58.920 40.909 20.43 17.33 38.80 2.83
8556 11850 3.487879 CCTGACCGGTGTTTTGTACAAAC 60.488 47.826 20.43 15.19 38.80 2.93
8557 11851 2.683867 CCTGACCGGTGTTTTGTACAAA 59.316 45.455 14.63 17.01 38.80 2.83
8558 11852 2.290464 CCTGACCGGTGTTTTGTACAA 58.710 47.619 14.63 3.59 38.80 2.41
8559 11853 1.475392 CCCTGACCGGTGTTTTGTACA 60.475 52.381 14.63 0.00 0.00 2.90
8560 11854 1.232119 CCCTGACCGGTGTTTTGTAC 58.768 55.000 14.63 0.00 0.00 2.90
8561 11855 0.838608 ACCCTGACCGGTGTTTTGTA 59.161 50.000 14.63 0.00 33.77 2.41
8562 11856 0.464916 GACCCTGACCGGTGTTTTGT 60.465 55.000 14.63 1.73 35.79 2.83
8563 11857 1.503818 CGACCCTGACCGGTGTTTTG 61.504 60.000 14.63 0.00 35.79 2.44
8564 11858 1.227734 CGACCCTGACCGGTGTTTT 60.228 57.895 14.63 0.00 35.79 2.43
8565 11859 2.424302 CGACCCTGACCGGTGTTT 59.576 61.111 14.63 0.00 35.79 2.83
8566 11860 4.309950 GCGACCCTGACCGGTGTT 62.310 66.667 14.63 0.00 35.79 3.32
8568 11862 4.742201 CTGCGACCCTGACCGGTG 62.742 72.222 14.63 0.00 35.79 4.94
8570 11864 3.530910 AAACTGCGACCCTGACCGG 62.531 63.158 0.00 0.00 0.00 5.28
8571 11865 2.027625 GAAACTGCGACCCTGACCG 61.028 63.158 0.00 0.00 0.00 4.79
8572 11866 1.671379 GGAAACTGCGACCCTGACC 60.671 63.158 0.00 0.00 0.00 4.02
8573 11867 0.534203 TTGGAAACTGCGACCCTGAC 60.534 55.000 0.00 0.00 0.00 3.51
8574 11868 0.181587 TTTGGAAACTGCGACCCTGA 59.818 50.000 0.00 0.00 0.00 3.86
8575 11869 0.310854 GTTTGGAAACTGCGACCCTG 59.689 55.000 0.00 0.00 36.03 4.45
8576 11870 0.182775 AGTTTGGAAACTGCGACCCT 59.817 50.000 3.95 0.00 46.80 4.34
8577 11871 2.715536 AGTTTGGAAACTGCGACCC 58.284 52.632 3.95 0.00 46.80 4.46
8585 11879 2.663826 TGGTGTTGCAGTTTGGAAAC 57.336 45.000 0.00 0.00 39.17 2.78
8586 11880 2.672478 CGTTGGTGTTGCAGTTTGGAAA 60.672 45.455 0.00 0.00 26.96 3.13
8587 11881 1.135257 CGTTGGTGTTGCAGTTTGGAA 60.135 47.619 0.00 0.00 0.00 3.53
8588 11882 0.453793 CGTTGGTGTTGCAGTTTGGA 59.546 50.000 0.00 0.00 0.00 3.53
8589 11883 0.172352 ACGTTGGTGTTGCAGTTTGG 59.828 50.000 0.00 0.00 0.00 3.28
8590 11884 2.353269 TCTACGTTGGTGTTGCAGTTTG 59.647 45.455 0.00 0.00 0.00 2.93
8591 11885 2.634600 TCTACGTTGGTGTTGCAGTTT 58.365 42.857 0.00 0.00 0.00 2.66
8592 11886 2.319136 TCTACGTTGGTGTTGCAGTT 57.681 45.000 0.00 0.00 0.00 3.16
8593 11887 2.543777 ATCTACGTTGGTGTTGCAGT 57.456 45.000 0.00 0.00 0.00 4.40
8594 11888 2.159627 GGAATCTACGTTGGTGTTGCAG 59.840 50.000 0.00 0.00 0.00 4.41
8595 11889 2.147958 GGAATCTACGTTGGTGTTGCA 58.852 47.619 0.00 0.00 0.00 4.08
8596 11890 2.147958 TGGAATCTACGTTGGTGTTGC 58.852 47.619 0.00 0.00 0.00 4.17
8597 11891 4.822036 TTTGGAATCTACGTTGGTGTTG 57.178 40.909 0.00 0.00 0.00 3.33
8598 11892 6.399639 AATTTTGGAATCTACGTTGGTGTT 57.600 33.333 0.00 0.00 0.00 3.32
8599 11893 6.399639 AAATTTTGGAATCTACGTTGGTGT 57.600 33.333 0.00 0.00 0.00 4.16
8600 11894 8.696175 GTTAAAATTTTGGAATCTACGTTGGTG 58.304 33.333 13.76 0.00 0.00 4.17
8601 11895 8.414778 TGTTAAAATTTTGGAATCTACGTTGGT 58.585 29.630 13.76 0.00 0.00 3.67
8602 11896 8.804688 TGTTAAAATTTTGGAATCTACGTTGG 57.195 30.769 13.76 0.00 0.00 3.77
8603 11897 8.424731 GCTGTTAAAATTTTGGAATCTACGTTG 58.575 33.333 13.76 0.00 0.00 4.10
8604 11898 7.325097 CGCTGTTAAAATTTTGGAATCTACGTT 59.675 33.333 13.76 0.00 0.00 3.99
8605 11899 6.799925 CGCTGTTAAAATTTTGGAATCTACGT 59.200 34.615 13.76 0.00 0.00 3.57
8606 11900 6.799925 ACGCTGTTAAAATTTTGGAATCTACG 59.200 34.615 13.76 9.08 0.00 3.51
8607 11901 9.274065 CTACGCTGTTAAAATTTTGGAATCTAC 57.726 33.333 13.76 1.74 0.00 2.59
8608 11902 8.455682 CCTACGCTGTTAAAATTTTGGAATCTA 58.544 33.333 13.76 0.00 0.00 1.98
8609 11903 7.312899 CCTACGCTGTTAAAATTTTGGAATCT 58.687 34.615 13.76 0.00 0.00 2.40
8610 11904 6.034577 GCCTACGCTGTTAAAATTTTGGAATC 59.965 38.462 13.76 0.00 0.00 2.52
8611 11905 5.867174 GCCTACGCTGTTAAAATTTTGGAAT 59.133 36.000 13.76 0.00 0.00 3.01
8612 11906 5.221263 TGCCTACGCTGTTAAAATTTTGGAA 60.221 36.000 13.76 0.00 35.36 3.53
8613 11907 4.278669 TGCCTACGCTGTTAAAATTTTGGA 59.721 37.500 13.76 0.00 35.36 3.53
8614 11908 4.551388 TGCCTACGCTGTTAAAATTTTGG 58.449 39.130 13.76 3.98 35.36 3.28
8615 11909 5.219633 ACTGCCTACGCTGTTAAAATTTTG 58.780 37.500 13.76 0.00 43.92 2.44
8616 11910 5.447624 ACTGCCTACGCTGTTAAAATTTT 57.552 34.783 8.75 8.75 43.92 1.82
8626 11920 1.467342 GGGTTAAAACTGCCTACGCTG 59.533 52.381 0.00 0.00 39.68 5.18
8627 11921 1.612462 GGGGTTAAAACTGCCTACGCT 60.612 52.381 0.00 0.00 35.36 5.07
8628 11922 0.806868 GGGGTTAAAACTGCCTACGC 59.193 55.000 0.00 0.00 0.00 4.42
8629 11923 2.081462 CTGGGGTTAAAACTGCCTACG 58.919 52.381 0.00 0.00 0.00 3.51
8630 11924 3.428413 TCTGGGGTTAAAACTGCCTAC 57.572 47.619 0.00 0.00 0.00 3.18
8631 11925 3.499021 GGTTCTGGGGTTAAAACTGCCTA 60.499 47.826 0.00 0.00 0.00 3.93
8632 11926 2.594131 GTTCTGGGGTTAAAACTGCCT 58.406 47.619 0.00 0.00 0.00 4.75
8633 11927 1.616865 GGTTCTGGGGTTAAAACTGCC 59.383 52.381 0.00 0.00 0.00 4.85
8634 11928 1.616865 GGGTTCTGGGGTTAAAACTGC 59.383 52.381 0.00 0.00 0.00 4.40
8635 11929 2.158370 AGGGGTTCTGGGGTTAAAACTG 60.158 50.000 0.00 0.00 0.00 3.16
8636 11930 2.149556 AGGGGTTCTGGGGTTAAAACT 58.850 47.619 0.00 0.00 0.00 2.66
8637 11931 2.244695 CAGGGGTTCTGGGGTTAAAAC 58.755 52.381 0.00 0.00 39.76 2.43
8638 11932 2.687003 CAGGGGTTCTGGGGTTAAAA 57.313 50.000 0.00 0.00 39.76 1.52
8647 11941 2.668144 TAAAACCACCAGGGGTTCTG 57.332 50.000 4.44 0.00 46.28 3.02
8648 11942 3.915346 AATAAAACCACCAGGGGTTCT 57.085 42.857 4.44 0.00 46.28 3.01
8649 11943 7.907841 ATAATAATAAAACCACCAGGGGTTC 57.092 36.000 4.44 0.00 46.28 3.62
8651 11945 7.658260 AGAATAATAATAAAACCACCAGGGGT 58.342 34.615 0.00 0.00 45.04 4.95
8652 11946 8.547481 AAGAATAATAATAAAACCACCAGGGG 57.453 34.615 0.00 0.00 42.91 4.79
8653 11947 8.638873 GGAAGAATAATAATAAAACCACCAGGG 58.361 37.037 0.00 0.00 44.81 4.45
8654 11948 9.421399 AGGAAGAATAATAATAAAACCACCAGG 57.579 33.333 0.00 0.00 42.21 4.45
8656 11950 9.416284 GGAGGAAGAATAATAATAAAACCACCA 57.584 33.333 0.00 0.00 0.00 4.17
8657 11951 8.857098 GGGAGGAAGAATAATAATAAAACCACC 58.143 37.037 0.00 0.00 0.00 4.61
8658 11952 9.416284 TGGGAGGAAGAATAATAATAAAACCAC 57.584 33.333 0.00 0.00 0.00 4.16
8667 11961 9.853177 GAAAAGAGATGGGAGGAAGAATAATAA 57.147 33.333 0.00 0.00 0.00 1.40
8668 11962 9.230477 AGAAAAGAGATGGGAGGAAGAATAATA 57.770 33.333 0.00 0.00 0.00 0.98
8669 11963 8.111928 AGAAAAGAGATGGGAGGAAGAATAAT 57.888 34.615 0.00 0.00 0.00 1.28
8670 11964 7.516450 AGAAAAGAGATGGGAGGAAGAATAA 57.484 36.000 0.00 0.00 0.00 1.40
8671 11965 8.068110 TCTAGAAAAGAGATGGGAGGAAGAATA 58.932 37.037 0.00 0.00 0.00 1.75
8672 11966 6.905776 TCTAGAAAAGAGATGGGAGGAAGAAT 59.094 38.462 0.00 0.00 0.00 2.40
8673 11967 6.264528 TCTAGAAAAGAGATGGGAGGAAGAA 58.735 40.000 0.00 0.00 0.00 2.52
8674 11968 5.843469 TCTAGAAAAGAGATGGGAGGAAGA 58.157 41.667 0.00 0.00 0.00 2.87
8675 11969 6.326064 TCATCTAGAAAAGAGATGGGAGGAAG 59.674 42.308 11.62 0.00 46.91 3.46
8676 11970 6.205298 TCATCTAGAAAAGAGATGGGAGGAA 58.795 40.000 11.62 0.00 46.91 3.36
8677 11971 5.781827 TCATCTAGAAAAGAGATGGGAGGA 58.218 41.667 11.62 0.00 46.91 3.71
8678 11972 6.491714 TTCATCTAGAAAAGAGATGGGAGG 57.508 41.667 11.62 0.00 46.91 4.30
8701 11995 6.849085 TGAGAGATAGTCAGAGAGCTTTTT 57.151 37.500 0.00 0.00 0.00 1.94
8702 11996 6.849085 TTGAGAGATAGTCAGAGAGCTTTT 57.151 37.500 0.00 0.00 0.00 2.27
8703 11997 6.606796 TGATTGAGAGATAGTCAGAGAGCTTT 59.393 38.462 0.00 0.00 0.00 3.51
8704 11998 6.128486 TGATTGAGAGATAGTCAGAGAGCTT 58.872 40.000 0.00 0.00 0.00 3.74
8705 11999 5.693961 TGATTGAGAGATAGTCAGAGAGCT 58.306 41.667 0.00 0.00 0.00 4.09
8706 12000 6.207221 TGATGATTGAGAGATAGTCAGAGAGC 59.793 42.308 0.00 0.00 0.00 4.09
8707 12001 7.748691 TGATGATTGAGAGATAGTCAGAGAG 57.251 40.000 0.00 0.00 0.00 3.20
8708 12002 7.394077 GGATGATGATTGAGAGATAGTCAGAGA 59.606 40.741 0.00 0.00 0.00 3.10
8709 12003 7.395206 AGGATGATGATTGAGAGATAGTCAGAG 59.605 40.741 0.00 0.00 0.00 3.35
8710 12004 7.240167 AGGATGATGATTGAGAGATAGTCAGA 58.760 38.462 0.00 0.00 0.00 3.27
8711 12005 7.395206 AGAGGATGATGATTGAGAGATAGTCAG 59.605 40.741 0.00 0.00 0.00 3.51
8712 12006 7.240167 AGAGGATGATGATTGAGAGATAGTCA 58.760 38.462 0.00 0.00 0.00 3.41
8713 12007 7.613022 AGAGAGGATGATGATTGAGAGATAGTC 59.387 40.741 0.00 0.00 0.00 2.59
8714 12008 7.472741 AGAGAGGATGATGATTGAGAGATAGT 58.527 38.462 0.00 0.00 0.00 2.12
8715 12009 7.949690 AGAGAGGATGATGATTGAGAGATAG 57.050 40.000 0.00 0.00 0.00 2.08
8716 12010 9.631257 GATAGAGAGGATGATGATTGAGAGATA 57.369 37.037 0.00 0.00 0.00 1.98
8717 12011 8.117312 TGATAGAGAGGATGATGATTGAGAGAT 58.883 37.037 0.00 0.00 0.00 2.75
8718 12012 7.468496 TGATAGAGAGGATGATGATTGAGAGA 58.532 38.462 0.00 0.00 0.00 3.10
8719 12013 7.706100 TGATAGAGAGGATGATGATTGAGAG 57.294 40.000 0.00 0.00 0.00 3.20
8720 12014 8.117312 AGATGATAGAGAGGATGATGATTGAGA 58.883 37.037 0.00 0.00 0.00 3.27
8721 12015 8.301252 AGATGATAGAGAGGATGATGATTGAG 57.699 38.462 0.00 0.00 0.00 3.02
8722 12016 8.667592 AAGATGATAGAGAGGATGATGATTGA 57.332 34.615 0.00 0.00 0.00 2.57
8723 12017 7.982919 GGAAGATGATAGAGAGGATGATGATTG 59.017 40.741 0.00 0.00 0.00 2.67
8724 12018 7.126115 GGGAAGATGATAGAGAGGATGATGATT 59.874 40.741 0.00 0.00 0.00 2.57
8725 12019 6.612456 GGGAAGATGATAGAGAGGATGATGAT 59.388 42.308 0.00 0.00 0.00 2.45
8726 12020 5.957168 GGGAAGATGATAGAGAGGATGATGA 59.043 44.000 0.00 0.00 0.00 2.92
8727 12021 5.129155 GGGGAAGATGATAGAGAGGATGATG 59.871 48.000 0.00 0.00 0.00 3.07
8728 12022 5.222716 TGGGGAAGATGATAGAGAGGATGAT 60.223 44.000 0.00 0.00 0.00 2.45
8729 12023 4.108614 TGGGGAAGATGATAGAGAGGATGA 59.891 45.833 0.00 0.00 0.00 2.92
8730 12024 4.423913 TGGGGAAGATGATAGAGAGGATG 58.576 47.826 0.00 0.00 0.00 3.51
8731 12025 4.774243 TGGGGAAGATGATAGAGAGGAT 57.226 45.455 0.00 0.00 0.00 3.24
8732 12026 4.359528 AGATGGGGAAGATGATAGAGAGGA 59.640 45.833 0.00 0.00 0.00 3.71
8733 12027 4.686891 AGATGGGGAAGATGATAGAGAGG 58.313 47.826 0.00 0.00 0.00 3.69
8734 12028 5.187576 GGAAGATGGGGAAGATGATAGAGAG 59.812 48.000 0.00 0.00 0.00 3.20
8735 12029 5.090139 GGAAGATGGGGAAGATGATAGAGA 58.910 45.833 0.00 0.00 0.00 3.10
8736 12030 4.224818 GGGAAGATGGGGAAGATGATAGAG 59.775 50.000 0.00 0.00 0.00 2.43
8737 12031 4.171234 GGGAAGATGGGGAAGATGATAGA 58.829 47.826 0.00 0.00 0.00 1.98
8738 12032 3.265479 GGGGAAGATGGGGAAGATGATAG 59.735 52.174 0.00 0.00 0.00 2.08
8739 12033 3.260205 GGGGAAGATGGGGAAGATGATA 58.740 50.000 0.00 0.00 0.00 2.15
8740 12034 2.068977 GGGGAAGATGGGGAAGATGAT 58.931 52.381 0.00 0.00 0.00 2.45
8741 12035 1.522900 GGGGAAGATGGGGAAGATGA 58.477 55.000 0.00 0.00 0.00 2.92
8742 12036 0.480252 GGGGGAAGATGGGGAAGATG 59.520 60.000 0.00 0.00 0.00 2.90
8743 12037 0.351998 AGGGGGAAGATGGGGAAGAT 59.648 55.000 0.00 0.00 0.00 2.40
8744 12038 0.624500 CAGGGGGAAGATGGGGAAGA 60.625 60.000 0.00 0.00 0.00 2.87
8745 12039 0.624500 TCAGGGGGAAGATGGGGAAG 60.625 60.000 0.00 0.00 0.00 3.46
8746 12040 0.047802 ATCAGGGGGAAGATGGGGAA 59.952 55.000 0.00 0.00 0.00 3.97
8747 12041 0.401979 GATCAGGGGGAAGATGGGGA 60.402 60.000 0.00 0.00 0.00 4.81
8748 12042 0.402566 AGATCAGGGGGAAGATGGGG 60.403 60.000 0.00 0.00 0.00 4.96
8749 12043 2.422939 TAGATCAGGGGGAAGATGGG 57.577 55.000 0.00 0.00 0.00 4.00
8750 12044 3.582208 CTCTTAGATCAGGGGGAAGATGG 59.418 52.174 0.00 0.00 0.00 3.51
8751 12045 4.487804 TCTCTTAGATCAGGGGGAAGATG 58.512 47.826 0.00 0.00 0.00 2.90
8752 12046 4.841813 TCTCTTAGATCAGGGGGAAGAT 57.158 45.455 0.00 0.00 0.00 2.40
8753 12047 4.841813 ATCTCTTAGATCAGGGGGAAGA 57.158 45.455 0.00 0.00 25.75 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.