Multiple sequence alignment - TraesCS5B01G501100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G501100 | chr5B | 100.000 | 3826 | 0 | 0 | 1 | 3826 | 668460285 | 668464110 | 0.000000e+00 | 7066.0 |
1 | TraesCS5B01G501100 | chr5A | 89.100 | 3679 | 269 | 66 | 1 | 3606 | 657536547 | 657540166 | 0.000000e+00 | 4451.0 |
2 | TraesCS5B01G501100 | chr5D | 93.993 | 2447 | 100 | 16 | 660 | 3080 | 529525062 | 529527487 | 0.000000e+00 | 3661.0 |
3 | TraesCS5B01G501100 | chr5D | 84.926 | 544 | 43 | 15 | 3075 | 3606 | 529532523 | 529533039 | 7.330000e-142 | 514.0 |
4 | TraesCS5B01G501100 | chr2B | 79.778 | 1889 | 293 | 64 | 1067 | 2913 | 152472398 | 152474239 | 0.000000e+00 | 1290.0 |
5 | TraesCS5B01G501100 | chr2B | 83.069 | 821 | 132 | 6 | 2017 | 2836 | 152609397 | 152608583 | 0.000000e+00 | 739.0 |
6 | TraesCS5B01G501100 | chr2B | 84.180 | 512 | 67 | 13 | 1070 | 1576 | 152610597 | 152610095 | 5.750000e-133 | 484.0 |
7 | TraesCS5B01G501100 | chr2B | 83.840 | 526 | 65 | 15 | 1070 | 1576 | 152570767 | 152570243 | 2.070000e-132 | 483.0 |
8 | TraesCS5B01G501100 | chr2B | 74.207 | 694 | 152 | 17 | 2019 | 2694 | 152504352 | 152505036 | 8.150000e-67 | 265.0 |
9 | TraesCS5B01G501100 | chr2D | 79.203 | 1957 | 311 | 75 | 995 | 2904 | 101365118 | 101363211 | 0.000000e+00 | 1271.0 |
10 | TraesCS5B01G501100 | chr2D | 83.477 | 811 | 129 | 4 | 2017 | 2826 | 101378690 | 101377884 | 0.000000e+00 | 750.0 |
11 | TraesCS5B01G501100 | chr2D | 83.846 | 520 | 67 | 12 | 1070 | 1576 | 100954921 | 100954406 | 2.670000e-131 | 479.0 |
12 | TraesCS5B01G501100 | chr4A | 83.894 | 981 | 135 | 9 | 2019 | 2997 | 714276993 | 714277952 | 0.000000e+00 | 915.0 |
13 | TraesCS5B01G501100 | chr2A | 80.424 | 1180 | 193 | 29 | 1660 | 2826 | 100651159 | 100650005 | 0.000000e+00 | 865.0 |
14 | TraesCS5B01G501100 | chr2A | 84.971 | 519 | 60 | 16 | 1070 | 1576 | 100656900 | 100656388 | 9.480000e-141 | 510.0 |
15 | TraesCS5B01G501100 | chr2A | 83.969 | 524 | 64 | 17 | 1070 | 1576 | 100633079 | 100632559 | 5.750000e-133 | 484.0 |
16 | TraesCS5B01G501100 | chr2A | 82.745 | 255 | 37 | 7 | 1656 | 1908 | 100632455 | 100632206 | 1.790000e-53 | 220.0 |
17 | TraesCS5B01G501100 | chr2A | 80.000 | 140 | 20 | 6 | 1742 | 1877 | 100628206 | 100628071 | 3.150000e-16 | 97.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G501100 | chr5B | 668460285 | 668464110 | 3825 | False | 7066.0 | 7066 | 100.0000 | 1 | 3826 | 1 | chr5B.!!$F1 | 3825 |
1 | TraesCS5B01G501100 | chr5A | 657536547 | 657540166 | 3619 | False | 4451.0 | 4451 | 89.1000 | 1 | 3606 | 1 | chr5A.!!$F1 | 3605 |
2 | TraesCS5B01G501100 | chr5D | 529525062 | 529527487 | 2425 | False | 3661.0 | 3661 | 93.9930 | 660 | 3080 | 1 | chr5D.!!$F1 | 2420 |
3 | TraesCS5B01G501100 | chr5D | 529532523 | 529533039 | 516 | False | 514.0 | 514 | 84.9260 | 3075 | 3606 | 1 | chr5D.!!$F2 | 531 |
4 | TraesCS5B01G501100 | chr2B | 152472398 | 152474239 | 1841 | False | 1290.0 | 1290 | 79.7780 | 1067 | 2913 | 1 | chr2B.!!$F1 | 1846 |
5 | TraesCS5B01G501100 | chr2B | 152608583 | 152610597 | 2014 | True | 611.5 | 739 | 83.6245 | 1070 | 2836 | 2 | chr2B.!!$R2 | 1766 |
6 | TraesCS5B01G501100 | chr2B | 152570243 | 152570767 | 524 | True | 483.0 | 483 | 83.8400 | 1070 | 1576 | 1 | chr2B.!!$R1 | 506 |
7 | TraesCS5B01G501100 | chr2B | 152504352 | 152505036 | 684 | False | 265.0 | 265 | 74.2070 | 2019 | 2694 | 1 | chr2B.!!$F2 | 675 |
8 | TraesCS5B01G501100 | chr2D | 101363211 | 101365118 | 1907 | True | 1271.0 | 1271 | 79.2030 | 995 | 2904 | 1 | chr2D.!!$R2 | 1909 |
9 | TraesCS5B01G501100 | chr2D | 101377884 | 101378690 | 806 | True | 750.0 | 750 | 83.4770 | 2017 | 2826 | 1 | chr2D.!!$R3 | 809 |
10 | TraesCS5B01G501100 | chr2D | 100954406 | 100954921 | 515 | True | 479.0 | 479 | 83.8460 | 1070 | 1576 | 1 | chr2D.!!$R1 | 506 |
11 | TraesCS5B01G501100 | chr4A | 714276993 | 714277952 | 959 | False | 915.0 | 915 | 83.8940 | 2019 | 2997 | 1 | chr4A.!!$F1 | 978 |
12 | TraesCS5B01G501100 | chr2A | 100650005 | 100651159 | 1154 | True | 865.0 | 865 | 80.4240 | 1660 | 2826 | 1 | chr2A.!!$R2 | 1166 |
13 | TraesCS5B01G501100 | chr2A | 100656388 | 100656900 | 512 | True | 510.0 | 510 | 84.9710 | 1070 | 1576 | 1 | chr2A.!!$R3 | 506 |
14 | TraesCS5B01G501100 | chr2A | 100632206 | 100633079 | 873 | True | 352.0 | 484 | 83.3570 | 1070 | 1908 | 2 | chr2A.!!$R4 | 838 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
890 | 908 | 0.109365 | CGGTCACTCTCAGCTCACAG | 60.109 | 60.0 | 0.00 | 0.00 | 0.00 | 3.66 | F |
895 | 923 | 0.831288 | ACTCTCAGCTCACAGGCAGT | 60.831 | 55.0 | 0.00 | 0.00 | 34.17 | 4.40 | F |
2129 | 2612 | 0.899717 | CAACCAAGGACACCATGGGG | 60.900 | 60.0 | 14.08 | 14.08 | 45.64 | 4.96 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2129 | 2612 | 1.153881 | GAGCAGGTCGTTCCCGTAC | 60.154 | 63.158 | 0.0 | 0.0 | 36.75 | 3.67 | R |
2249 | 2735 | 1.801913 | GTGCGAGCTAGTGTCGTGG | 60.802 | 63.158 | 15.3 | 0.0 | 39.69 | 4.94 | R |
3766 | 4294 | 0.037303 | TTTGCTCTCCTCTGCCAAGG | 59.963 | 55.000 | 0.0 | 0.0 | 37.81 | 3.61 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
51 | 52 | 3.624861 | ACGCCTGCATTTGATAAAGAGAG | 59.375 | 43.478 | 0.00 | 0.00 | 0.00 | 3.20 |
57 | 58 | 6.187125 | TGCATTTGATAAAGAGAGCAAGTC | 57.813 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
60 | 61 | 7.094075 | TGCATTTGATAAAGAGAGCAAGTCATT | 60.094 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
81 | 82 | 7.012799 | GTCATTATTCAGATCCCCTCTTTTGTC | 59.987 | 40.741 | 0.00 | 0.00 | 29.16 | 3.18 |
116 | 118 | 5.104900 | TGCTTAAGGGAGAGTGATCCTTAAC | 60.105 | 44.000 | 4.29 | 7.67 | 43.87 | 2.01 |
117 | 119 | 5.104900 | GCTTAAGGGAGAGTGATCCTTAACA | 60.105 | 44.000 | 4.29 | 0.00 | 43.87 | 2.41 |
141 | 143 | 7.672660 | ACATTGGCATATGATCATCTTACCATT | 59.327 | 33.333 | 12.53 | 9.42 | 0.00 | 3.16 |
277 | 279 | 4.394712 | GAGGTGCAGGGTGGTCGG | 62.395 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
283 | 285 | 2.997315 | CAGGGTGGTCGGCAGAGA | 60.997 | 66.667 | 0.00 | 0.00 | 0.00 | 3.10 |
291 | 293 | 0.670854 | GGTCGGCAGAGACAAAGACC | 60.671 | 60.000 | 8.17 | 0.00 | 42.62 | 3.85 |
324 | 326 | 5.545658 | TCGCAAGATGTCCAAAGAATTAC | 57.454 | 39.130 | 0.00 | 0.00 | 45.01 | 1.89 |
332 | 334 | 9.533831 | AAGATGTCCAAAGAATTACCTTTACAT | 57.466 | 29.630 | 7.33 | 7.33 | 37.72 | 2.29 |
341 | 343 | 4.818534 | ATTACCTTTACATGCATGCTCG | 57.181 | 40.909 | 26.53 | 12.20 | 0.00 | 5.03 |
352 | 354 | 3.586100 | TGCATGCTCGTAACAGAAGTA | 57.414 | 42.857 | 20.33 | 0.00 | 0.00 | 2.24 |
364 | 366 | 5.064452 | CGTAACAGAAGTACCTCTACATCGT | 59.936 | 44.000 | 0.00 | 0.00 | 0.00 | 3.73 |
374 | 376 | 1.671328 | CTCTACATCGTCGCCTTGAGA | 59.329 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
377 | 379 | 4.072839 | TCTACATCGTCGCCTTGAGATAT | 58.927 | 43.478 | 0.00 | 0.00 | 0.00 | 1.63 |
379 | 381 | 4.162096 | ACATCGTCGCCTTGAGATATAC | 57.838 | 45.455 | 0.00 | 0.00 | 0.00 | 1.47 |
383 | 386 | 5.258456 | TCGTCGCCTTGAGATATACTTTT | 57.742 | 39.130 | 0.00 | 0.00 | 0.00 | 2.27 |
388 | 391 | 7.306051 | CGTCGCCTTGAGATATACTTTTTACTG | 60.306 | 40.741 | 0.00 | 0.00 | 0.00 | 2.74 |
393 | 396 | 7.280205 | CCTTGAGATATACTTTTTACTGCCGTT | 59.720 | 37.037 | 0.00 | 0.00 | 0.00 | 4.44 |
405 | 408 | 3.578272 | GCCGTTGCAACACACGGA | 61.578 | 61.111 | 27.40 | 0.00 | 42.17 | 4.69 |
406 | 409 | 2.326550 | CCGTTGCAACACACGGAC | 59.673 | 61.111 | 28.01 | 0.24 | 42.17 | 4.79 |
415 | 418 | 0.383949 | AACACACGGACATGTTTGCC | 59.616 | 50.000 | 0.00 | 0.00 | 35.51 | 4.52 |
426 | 429 | 4.379082 | GGACATGTTTGCCGGTAAACTAAG | 60.379 | 45.833 | 36.94 | 29.19 | 40.36 | 2.18 |
429 | 432 | 5.299782 | ACATGTTTGCCGGTAAACTAAGAAA | 59.700 | 36.000 | 36.94 | 22.69 | 40.36 | 2.52 |
430 | 433 | 6.015772 | ACATGTTTGCCGGTAAACTAAGAAAT | 60.016 | 34.615 | 36.94 | 23.66 | 40.36 | 2.17 |
434 | 437 | 6.746745 | TTGCCGGTAAACTAAGAAATAAGG | 57.253 | 37.500 | 1.06 | 0.00 | 0.00 | 2.69 |
436 | 439 | 5.876460 | TGCCGGTAAACTAAGAAATAAGGTC | 59.124 | 40.000 | 1.90 | 0.00 | 0.00 | 3.85 |
448 | 451 | 6.732896 | AGAAATAAGGTCTGATACATCCGT | 57.267 | 37.500 | 0.00 | 0.00 | 0.00 | 4.69 |
461 | 464 | 1.618837 | ACATCCGTAGTGCAAGACAGT | 59.381 | 47.619 | 0.00 | 0.00 | 35.57 | 3.55 |
462 | 465 | 1.995484 | CATCCGTAGTGCAAGACAGTG | 59.005 | 52.381 | 0.00 | 0.00 | 32.79 | 3.66 |
463 | 466 | 1.037493 | TCCGTAGTGCAAGACAGTGT | 58.963 | 50.000 | 0.00 | 0.00 | 32.79 | 3.55 |
464 | 467 | 2.232399 | TCCGTAGTGCAAGACAGTGTA | 58.768 | 47.619 | 0.00 | 0.00 | 32.79 | 2.90 |
465 | 468 | 2.624364 | TCCGTAGTGCAAGACAGTGTAA | 59.376 | 45.455 | 0.00 | 0.00 | 32.79 | 2.41 |
466 | 469 | 3.257375 | TCCGTAGTGCAAGACAGTGTAAT | 59.743 | 43.478 | 0.00 | 0.00 | 32.79 | 1.89 |
468 | 471 | 3.612860 | CGTAGTGCAAGACAGTGTAATCC | 59.387 | 47.826 | 0.00 | 0.00 | 32.79 | 3.01 |
469 | 472 | 3.769739 | AGTGCAAGACAGTGTAATCCA | 57.230 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
470 | 473 | 3.403038 | AGTGCAAGACAGTGTAATCCAC | 58.597 | 45.455 | 0.00 | 2.20 | 44.89 | 4.02 |
501 | 504 | 6.480320 | GTGGACATTGTATTCCTCTCATACAC | 59.520 | 42.308 | 0.00 | 0.00 | 36.94 | 2.90 |
559 | 569 | 9.155975 | CATATGCACAAAAGGGTATATCTAGAC | 57.844 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
565 | 575 | 7.328737 | CACAAAAGGGTATATCTAGACGTATGC | 59.671 | 40.741 | 0.00 | 0.00 | 0.00 | 3.14 |
571 | 581 | 6.072064 | GGGTATATCTAGACGTATGCACAAGT | 60.072 | 42.308 | 0.00 | 0.00 | 0.00 | 3.16 |
572 | 582 | 7.022384 | GGTATATCTAGACGTATGCACAAGTC | 58.978 | 42.308 | 2.57 | 2.57 | 0.00 | 3.01 |
601 | 613 | 9.891828 | TTGTTTTGTGTATGATGTTATCTTGAC | 57.108 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
602 | 614 | 9.061435 | TGTTTTGTGTATGATGTTATCTTGACA | 57.939 | 29.630 | 0.00 | 0.00 | 0.00 | 3.58 |
603 | 615 | 9.546909 | GTTTTGTGTATGATGTTATCTTGACAG | 57.453 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
606 | 618 | 8.846943 | TGTGTATGATGTTATCTTGACAGTTT | 57.153 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
607 | 619 | 9.936759 | TGTGTATGATGTTATCTTGACAGTTTA | 57.063 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
647 | 659 | 9.661563 | ATTTACTTTCGACATGTTGGACTAATA | 57.338 | 29.630 | 13.27 | 0.00 | 0.00 | 0.98 |
648 | 660 | 9.491675 | TTTACTTTCGACATGTTGGACTAATAA | 57.508 | 29.630 | 13.27 | 3.09 | 0.00 | 1.40 |
649 | 661 | 9.661563 | TTACTTTCGACATGTTGGACTAATAAT | 57.338 | 29.630 | 13.27 | 0.00 | 0.00 | 1.28 |
692 | 705 | 4.620589 | ACCATCATCTAATCCTGCTCAG | 57.379 | 45.455 | 0.00 | 0.00 | 0.00 | 3.35 |
717 | 730 | 6.681777 | CACTGCAAAGAAAGGCTAGTTAATT | 58.318 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
841 | 859 | 1.586303 | GCGTGCACGAGATCGATGA | 60.586 | 57.895 | 41.19 | 0.00 | 43.02 | 2.92 |
845 | 863 | 2.282555 | CGTGCACGAGATCGATGAAAAT | 59.717 | 45.455 | 34.93 | 0.00 | 43.02 | 1.82 |
853 | 871 | 4.731961 | CGAGATCGATGAAAATTTTGGCTG | 59.268 | 41.667 | 8.47 | 0.00 | 43.02 | 4.85 |
859 | 877 | 4.491280 | CGATGAAAATTTTGGCTGCATTCG | 60.491 | 41.667 | 8.47 | 7.34 | 0.00 | 3.34 |
889 | 907 | 1.527433 | CCGGTCACTCTCAGCTCACA | 61.527 | 60.000 | 0.00 | 0.00 | 0.00 | 3.58 |
890 | 908 | 0.109365 | CGGTCACTCTCAGCTCACAG | 60.109 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
895 | 923 | 0.831288 | ACTCTCAGCTCACAGGCAGT | 60.831 | 55.000 | 0.00 | 0.00 | 34.17 | 4.40 |
914 | 942 | 4.228097 | GCGCAGGCGTACATGCAG | 62.228 | 66.667 | 15.64 | 8.15 | 42.68 | 4.41 |
915 | 943 | 3.566853 | CGCAGGCGTACATGCAGG | 61.567 | 66.667 | 5.34 | 0.00 | 42.68 | 4.85 |
916 | 944 | 2.436646 | GCAGGCGTACATGCAGGT | 60.437 | 61.111 | 9.77 | 9.77 | 42.11 | 4.00 |
917 | 945 | 2.464459 | GCAGGCGTACATGCAGGTC | 61.464 | 63.158 | 7.56 | 0.00 | 42.11 | 3.85 |
1236 | 1273 | 4.052518 | GTCCCCATGGTGCAGCCT | 62.053 | 66.667 | 14.36 | 0.00 | 38.35 | 4.58 |
1258 | 1295 | 4.908687 | TGCGCGAATGGATCCCCG | 62.909 | 66.667 | 12.10 | 11.35 | 34.29 | 5.73 |
1329 | 1395 | 4.008933 | GCCGACCCTGTGCTCTGT | 62.009 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
1330 | 1396 | 2.047844 | CCGACCCTGTGCTCTGTG | 60.048 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
1331 | 1397 | 2.047844 | CGACCCTGTGCTCTGTGG | 60.048 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
1579 | 1685 | 0.989890 | CAAGCTCAAGGTACGTACGC | 59.010 | 55.000 | 16.72 | 15.60 | 0.00 | 4.42 |
1585 | 1691 | 1.068333 | TCAAGGTACGTACGCAGGAAC | 60.068 | 52.381 | 16.72 | 6.00 | 0.00 | 3.62 |
1642 | 1756 | 3.433306 | ACTTAACAGCTGCCATTGGTA | 57.567 | 42.857 | 15.27 | 0.00 | 0.00 | 3.25 |
1924 | 2376 | 6.796705 | TTTAGGTGCTTAACTACTTGCTTC | 57.203 | 37.500 | 0.00 | 0.00 | 0.00 | 3.86 |
1960 | 2419 | 9.930693 | TTTTGTAACTTGGTTCAAAACAATACT | 57.069 | 25.926 | 0.00 | 0.00 | 32.98 | 2.12 |
1961 | 2420 | 8.918961 | TTGTAACTTGGTTCAAAACAATACTG | 57.081 | 30.769 | 0.00 | 0.00 | 0.00 | 2.74 |
2013 | 2496 | 4.603985 | CATGTGTTCATGGAATTCGATGG | 58.396 | 43.478 | 24.75 | 10.72 | 45.30 | 3.51 |
2129 | 2612 | 0.899717 | CAACCAAGGACACCATGGGG | 60.900 | 60.000 | 14.08 | 14.08 | 45.64 | 4.96 |
2249 | 2735 | 0.036858 | AGACCTTCTTCTTCGCTGGC | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2351 | 2837 | 2.574955 | GGTGGTGAGAGAGTGCGGT | 61.575 | 63.158 | 0.00 | 0.00 | 0.00 | 5.68 |
2364 | 2856 | 1.087771 | GTGCGGTAATGAGGTTCCCG | 61.088 | 60.000 | 0.00 | 0.00 | 41.50 | 5.14 |
2394 | 2886 | 4.036262 | ACGTGCTCAACAAATTGAAGCTAA | 59.964 | 37.500 | 16.00 | 0.00 | 44.28 | 3.09 |
2400 | 2892 | 6.183359 | GCTCAACAAATTGAAGCTAATCAACG | 60.183 | 38.462 | 2.97 | 0.00 | 44.28 | 4.10 |
2489 | 2981 | 2.509336 | GAGGTCGGTGGCATCACG | 60.509 | 66.667 | 0.00 | 0.33 | 44.50 | 4.35 |
2563 | 3055 | 1.132689 | GGAGGTATGGGGAGAGGATGT | 60.133 | 57.143 | 0.00 | 0.00 | 0.00 | 3.06 |
2920 | 3419 | 5.579511 | ACACTAGATATGTTTGTGTAACCGC | 59.420 | 40.000 | 0.00 | 0.00 | 39.65 | 5.68 |
2951 | 3450 | 0.469144 | GTTTGGGCTCAGAAACCCCA | 60.469 | 55.000 | 5.82 | 2.90 | 46.43 | 4.96 |
3012 | 3514 | 4.175516 | CAAATAATTCATGCAAGCACGGT | 58.824 | 39.130 | 0.00 | 0.00 | 0.00 | 4.83 |
3013 | 3515 | 2.917701 | TAATTCATGCAAGCACGGTG | 57.082 | 45.000 | 3.15 | 3.15 | 0.00 | 4.94 |
3096 | 3599 | 9.685276 | TCATGTTCAATGATTCCTATAGTGTTT | 57.315 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
3147 | 3650 | 4.338118 | TGCTTTGTCCGAACTTTGAGAAAT | 59.662 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
3168 | 3671 | 1.482593 | CCTAAGTCCATGAAGTCGCCT | 59.517 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
3193 | 3696 | 7.278724 | TCTAAAATCTTCAACCAATCCCCTA | 57.721 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3208 | 3711 | 1.614317 | CCCCTAGGCAAGAAACACTGG | 60.614 | 57.143 | 2.05 | 0.00 | 0.00 | 4.00 |
3223 | 3726 | 8.045176 | AGAAACACTGGATAATACAAAAGAGC | 57.955 | 34.615 | 0.00 | 0.00 | 0.00 | 4.09 |
3280 | 3796 | 3.152341 | CCCTCATGTGAGCAAAGAAAGT | 58.848 | 45.455 | 4.48 | 0.00 | 40.75 | 2.66 |
3287 | 3803 | 7.108194 | TCATGTGAGCAAAGAAAGTATGAGAT | 58.892 | 34.615 | 0.00 | 0.00 | 0.00 | 2.75 |
3316 | 3835 | 3.691118 | TGATTCTTCCTATGCAGTGCAAC | 59.309 | 43.478 | 23.90 | 4.45 | 43.62 | 4.17 |
3326 | 3845 | 2.048023 | CAGTGCAACCGCCATCCAT | 61.048 | 57.895 | 0.00 | 0.00 | 37.80 | 3.41 |
3361 | 3880 | 5.759506 | TTCGCCACATCTTTTGTTTCTTA | 57.240 | 34.783 | 0.00 | 0.00 | 36.00 | 2.10 |
3495 | 4020 | 7.916552 | TCTTGCTACTTACACTCAAGTTTTTC | 58.083 | 34.615 | 0.00 | 0.00 | 39.45 | 2.29 |
3533 | 4059 | 8.779096 | TTGAACCCTAAAACCTTAAACCAATA | 57.221 | 30.769 | 0.00 | 0.00 | 0.00 | 1.90 |
3543 | 4069 | 7.727578 | AACCTTAAACCAATAAATACCCAGG | 57.272 | 36.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3563 | 4091 | 0.606401 | CACCAAGTCATCGCCAAGGT | 60.606 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
3576 | 4104 | 1.599047 | CAAGGTCAGGCGAGTGGAT | 59.401 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
3593 | 4121 | 2.532843 | GGATAAGCCATCCCCGTAGTA | 58.467 | 52.381 | 3.93 | 0.00 | 46.85 | 1.82 |
3606 | 4134 | 0.380733 | CGTAGTACGCTCCAGCATGA | 59.619 | 55.000 | 10.19 | 0.00 | 42.21 | 3.07 |
3607 | 4135 | 1.001268 | CGTAGTACGCTCCAGCATGAT | 60.001 | 52.381 | 10.19 | 0.00 | 42.21 | 2.45 |
3608 | 4136 | 2.225727 | CGTAGTACGCTCCAGCATGATA | 59.774 | 50.000 | 10.19 | 0.00 | 42.21 | 2.15 |
3609 | 4137 | 2.802787 | AGTACGCTCCAGCATGATAC | 57.197 | 50.000 | 0.00 | 0.00 | 39.69 | 2.24 |
3610 | 4138 | 2.031870 | AGTACGCTCCAGCATGATACA | 58.968 | 47.619 | 0.00 | 0.00 | 39.69 | 2.29 |
3611 | 4139 | 2.430694 | AGTACGCTCCAGCATGATACAA | 59.569 | 45.455 | 0.00 | 0.00 | 39.69 | 2.41 |
3612 | 4140 | 1.656652 | ACGCTCCAGCATGATACAAC | 58.343 | 50.000 | 0.00 | 0.00 | 39.69 | 3.32 |
3613 | 4141 | 1.066215 | ACGCTCCAGCATGATACAACA | 60.066 | 47.619 | 0.00 | 0.00 | 39.69 | 3.33 |
3614 | 4142 | 1.328680 | CGCTCCAGCATGATACAACAC | 59.671 | 52.381 | 0.00 | 0.00 | 39.69 | 3.32 |
3615 | 4143 | 1.672881 | GCTCCAGCATGATACAACACC | 59.327 | 52.381 | 0.00 | 0.00 | 39.69 | 4.16 |
3616 | 4144 | 2.681976 | GCTCCAGCATGATACAACACCT | 60.682 | 50.000 | 0.00 | 0.00 | 39.69 | 4.00 |
3617 | 4145 | 3.614092 | CTCCAGCATGATACAACACCTT | 58.386 | 45.455 | 0.00 | 0.00 | 39.69 | 3.50 |
3618 | 4146 | 3.346315 | TCCAGCATGATACAACACCTTG | 58.654 | 45.455 | 0.00 | 0.00 | 39.69 | 3.61 |
3619 | 4147 | 2.424601 | CCAGCATGATACAACACCTTGG | 59.575 | 50.000 | 0.00 | 0.00 | 39.69 | 3.61 |
3620 | 4148 | 3.084039 | CAGCATGATACAACACCTTGGT | 58.916 | 45.455 | 0.00 | 0.00 | 39.69 | 3.67 |
3621 | 4149 | 3.084039 | AGCATGATACAACACCTTGGTG | 58.916 | 45.455 | 17.34 | 17.34 | 41.80 | 4.17 |
3622 | 4150 | 5.581112 | CAGCATGATACAACACCTTGGTGT | 61.581 | 45.833 | 18.69 | 18.69 | 46.17 | 4.16 |
3623 | 4151 | 7.326345 | CAGCATGATACAACACCTTGGTGTC | 62.326 | 48.000 | 23.58 | 12.51 | 41.81 | 3.67 |
3626 | 4154 | 4.868026 | CAACACCTTGGTGTCCGA | 57.132 | 55.556 | 23.58 | 0.00 | 36.42 | 4.55 |
3627 | 4155 | 3.322514 | CAACACCTTGGTGTCCGAT | 57.677 | 52.632 | 23.58 | 7.39 | 36.42 | 4.18 |
3628 | 4156 | 1.604604 | CAACACCTTGGTGTCCGATT | 58.395 | 50.000 | 23.58 | 7.03 | 36.42 | 3.34 |
3629 | 4157 | 1.953686 | CAACACCTTGGTGTCCGATTT | 59.046 | 47.619 | 23.58 | 6.34 | 36.42 | 2.17 |
3630 | 4158 | 2.358322 | ACACCTTGGTGTCCGATTTT | 57.642 | 45.000 | 18.69 | 0.00 | 30.83 | 1.82 |
3631 | 4159 | 2.661718 | ACACCTTGGTGTCCGATTTTT | 58.338 | 42.857 | 18.69 | 0.00 | 30.83 | 1.94 |
3632 | 4160 | 2.360801 | ACACCTTGGTGTCCGATTTTTG | 59.639 | 45.455 | 18.69 | 0.00 | 30.83 | 2.44 |
3633 | 4161 | 2.360801 | CACCTTGGTGTCCGATTTTTGT | 59.639 | 45.455 | 11.39 | 0.00 | 0.00 | 2.83 |
3634 | 4162 | 3.566322 | CACCTTGGTGTCCGATTTTTGTA | 59.434 | 43.478 | 11.39 | 0.00 | 0.00 | 2.41 |
3635 | 4163 | 3.566742 | ACCTTGGTGTCCGATTTTTGTAC | 59.433 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
3636 | 4164 | 3.566322 | CCTTGGTGTCCGATTTTTGTACA | 59.434 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
3637 | 4165 | 4.036971 | CCTTGGTGTCCGATTTTTGTACAA | 59.963 | 41.667 | 3.59 | 3.59 | 0.00 | 2.41 |
3638 | 4166 | 5.450688 | CCTTGGTGTCCGATTTTTGTACAAA | 60.451 | 40.000 | 17.01 | 17.01 | 0.00 | 2.83 |
3639 | 4167 | 5.176407 | TGGTGTCCGATTTTTGTACAAAG | 57.824 | 39.130 | 19.72 | 9.28 | 0.00 | 2.77 |
3640 | 4168 | 4.641094 | TGGTGTCCGATTTTTGTACAAAGT | 59.359 | 37.500 | 19.72 | 13.33 | 0.00 | 2.66 |
3641 | 4169 | 5.125739 | TGGTGTCCGATTTTTGTACAAAGTT | 59.874 | 36.000 | 19.72 | 12.03 | 0.00 | 2.66 |
3642 | 4170 | 5.457473 | GGTGTCCGATTTTTGTACAAAGTTG | 59.543 | 40.000 | 19.72 | 15.59 | 0.00 | 3.16 |
3643 | 4171 | 6.259638 | GTGTCCGATTTTTGTACAAAGTTGA | 58.740 | 36.000 | 19.72 | 11.22 | 0.00 | 3.18 |
3644 | 4172 | 6.413818 | GTGTCCGATTTTTGTACAAAGTTGAG | 59.586 | 38.462 | 19.72 | 11.11 | 0.00 | 3.02 |
3645 | 4173 | 6.316640 | TGTCCGATTTTTGTACAAAGTTGAGA | 59.683 | 34.615 | 19.72 | 12.97 | 0.00 | 3.27 |
3646 | 4174 | 7.012894 | TGTCCGATTTTTGTACAAAGTTGAGAT | 59.987 | 33.333 | 19.72 | 9.29 | 0.00 | 2.75 |
3647 | 4175 | 7.534239 | GTCCGATTTTTGTACAAAGTTGAGATC | 59.466 | 37.037 | 19.72 | 14.96 | 0.00 | 2.75 |
3648 | 4176 | 6.519761 | CCGATTTTTGTACAAAGTTGAGATCG | 59.480 | 38.462 | 19.72 | 22.29 | 0.00 | 3.69 |
3649 | 4177 | 7.287950 | CGATTTTTGTACAAAGTTGAGATCGA | 58.712 | 34.615 | 24.83 | 9.31 | 0.00 | 3.59 |
3650 | 4178 | 7.957484 | CGATTTTTGTACAAAGTTGAGATCGAT | 59.043 | 33.333 | 24.83 | 0.00 | 0.00 | 3.59 |
3651 | 4179 | 8.955061 | ATTTTTGTACAAAGTTGAGATCGATG | 57.045 | 30.769 | 19.72 | 0.00 | 0.00 | 3.84 |
3652 | 4180 | 6.480524 | TTTGTACAAAGTTGAGATCGATGG | 57.519 | 37.500 | 17.01 | 0.00 | 0.00 | 3.51 |
3653 | 4181 | 3.932710 | TGTACAAAGTTGAGATCGATGGC | 59.067 | 43.478 | 0.54 | 0.00 | 0.00 | 4.40 |
3654 | 4182 | 2.359900 | ACAAAGTTGAGATCGATGGCC | 58.640 | 47.619 | 0.54 | 0.00 | 0.00 | 5.36 |
3655 | 4183 | 2.290260 | ACAAAGTTGAGATCGATGGCCA | 60.290 | 45.455 | 8.56 | 8.56 | 0.00 | 5.36 |
3656 | 4184 | 2.749076 | CAAAGTTGAGATCGATGGCCAA | 59.251 | 45.455 | 10.96 | 0.00 | 0.00 | 4.52 |
3657 | 4185 | 2.787473 | AGTTGAGATCGATGGCCAAA | 57.213 | 45.000 | 10.96 | 0.00 | 0.00 | 3.28 |
3658 | 4186 | 3.071874 | AGTTGAGATCGATGGCCAAAA | 57.928 | 42.857 | 10.96 | 0.00 | 0.00 | 2.44 |
3659 | 4187 | 2.749621 | AGTTGAGATCGATGGCCAAAAC | 59.250 | 45.455 | 10.96 | 3.39 | 0.00 | 2.43 |
3660 | 4188 | 1.750193 | TGAGATCGATGGCCAAAACC | 58.250 | 50.000 | 10.96 | 0.00 | 0.00 | 3.27 |
3661 | 4189 | 1.025041 | GAGATCGATGGCCAAAACCC | 58.975 | 55.000 | 10.96 | 0.00 | 0.00 | 4.11 |
3662 | 4190 | 0.331278 | AGATCGATGGCCAAAACCCA | 59.669 | 50.000 | 10.96 | 0.00 | 36.66 | 4.51 |
3663 | 4191 | 1.063717 | AGATCGATGGCCAAAACCCAT | 60.064 | 47.619 | 10.96 | 0.00 | 45.47 | 4.00 |
3664 | 4192 | 1.067516 | GATCGATGGCCAAAACCCATG | 59.932 | 52.381 | 10.96 | 0.00 | 42.94 | 3.66 |
3665 | 4193 | 0.038890 | TCGATGGCCAAAACCCATGA | 59.961 | 50.000 | 10.96 | 0.00 | 42.94 | 3.07 |
3666 | 4194 | 0.894141 | CGATGGCCAAAACCCATGAA | 59.106 | 50.000 | 10.96 | 0.00 | 42.94 | 2.57 |
3667 | 4195 | 1.135024 | CGATGGCCAAAACCCATGAAG | 60.135 | 52.381 | 10.96 | 0.00 | 42.94 | 3.02 |
3668 | 4196 | 0.614812 | ATGGCCAAAACCCATGAAGC | 59.385 | 50.000 | 10.96 | 0.00 | 41.40 | 3.86 |
3669 | 4197 | 0.762082 | TGGCCAAAACCCATGAAGCA | 60.762 | 50.000 | 0.61 | 0.00 | 0.00 | 3.91 |
3670 | 4198 | 0.396060 | GGCCAAAACCCATGAAGCAA | 59.604 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3671 | 4199 | 1.202746 | GGCCAAAACCCATGAAGCAAA | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 3.68 |
3672 | 4200 | 2.570135 | GCCAAAACCCATGAAGCAAAA | 58.430 | 42.857 | 0.00 | 0.00 | 0.00 | 2.44 |
3673 | 4201 | 2.549329 | GCCAAAACCCATGAAGCAAAAG | 59.451 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
3674 | 4202 | 3.807553 | CCAAAACCCATGAAGCAAAAGT | 58.192 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
3675 | 4203 | 3.560896 | CCAAAACCCATGAAGCAAAAGTG | 59.439 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3676 | 4204 | 4.440880 | CAAAACCCATGAAGCAAAAGTGA | 58.559 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3677 | 4205 | 3.733443 | AACCCATGAAGCAAAAGTGAC | 57.267 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
3678 | 4206 | 1.608590 | ACCCATGAAGCAAAAGTGACG | 59.391 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
3679 | 4207 | 1.879380 | CCCATGAAGCAAAAGTGACGA | 59.121 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
3680 | 4208 | 2.293122 | CCCATGAAGCAAAAGTGACGAA | 59.707 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
3681 | 4209 | 3.057315 | CCCATGAAGCAAAAGTGACGAAT | 60.057 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
3682 | 4210 | 3.916172 | CCATGAAGCAAAAGTGACGAATG | 59.084 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
3683 | 4211 | 3.624326 | TGAAGCAAAAGTGACGAATGG | 57.376 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
3684 | 4212 | 2.287547 | TGAAGCAAAAGTGACGAATGGC | 60.288 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
3685 | 4213 | 1.609208 | AGCAAAAGTGACGAATGGCT | 58.391 | 45.000 | 0.00 | 0.00 | 0.00 | 4.75 |
3686 | 4214 | 1.956477 | AGCAAAAGTGACGAATGGCTT | 59.044 | 42.857 | 0.00 | 0.00 | 0.00 | 4.35 |
3687 | 4215 | 2.362077 | AGCAAAAGTGACGAATGGCTTT | 59.638 | 40.909 | 0.00 | 0.00 | 33.20 | 3.51 |
3688 | 4216 | 3.123050 | GCAAAAGTGACGAATGGCTTTT | 58.877 | 40.909 | 0.00 | 0.00 | 40.46 | 2.27 |
3689 | 4217 | 4.037446 | AGCAAAAGTGACGAATGGCTTTTA | 59.963 | 37.500 | 0.00 | 0.00 | 38.58 | 1.52 |
3690 | 4218 | 4.742659 | GCAAAAGTGACGAATGGCTTTTAA | 59.257 | 37.500 | 0.00 | 0.00 | 38.58 | 1.52 |
3691 | 4219 | 5.332280 | GCAAAAGTGACGAATGGCTTTTAAC | 60.332 | 40.000 | 0.00 | 0.00 | 38.58 | 2.01 |
3692 | 4220 | 5.508200 | AAAGTGACGAATGGCTTTTAACA | 57.492 | 34.783 | 0.00 | 0.00 | 0.00 | 2.41 |
3693 | 4221 | 5.705609 | AAGTGACGAATGGCTTTTAACAT | 57.294 | 34.783 | 0.00 | 0.00 | 0.00 | 2.71 |
3694 | 4222 | 5.046910 | AGTGACGAATGGCTTTTAACATG | 57.953 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
3695 | 4223 | 4.518970 | AGTGACGAATGGCTTTTAACATGT | 59.481 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
3696 | 4224 | 4.616802 | GTGACGAATGGCTTTTAACATGTG | 59.383 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
3697 | 4225 | 4.277174 | TGACGAATGGCTTTTAACATGTGT | 59.723 | 37.500 | 0.00 | 0.00 | 0.00 | 3.72 |
3698 | 4226 | 4.794169 | ACGAATGGCTTTTAACATGTGTC | 58.206 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
3699 | 4227 | 3.845775 | CGAATGGCTTTTAACATGTGTCG | 59.154 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
3700 | 4228 | 4.612712 | CGAATGGCTTTTAACATGTGTCGT | 60.613 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
3701 | 4229 | 5.390040 | CGAATGGCTTTTAACATGTGTCGTA | 60.390 | 40.000 | 0.00 | 0.00 | 0.00 | 3.43 |
3702 | 4230 | 4.735662 | TGGCTTTTAACATGTGTCGTAC | 57.264 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
3703 | 4231 | 4.127907 | TGGCTTTTAACATGTGTCGTACA | 58.872 | 39.130 | 0.00 | 0.00 | 44.87 | 2.90 |
3704 | 4232 | 4.575236 | TGGCTTTTAACATGTGTCGTACAA | 59.425 | 37.500 | 0.00 | 0.00 | 43.77 | 2.41 |
3705 | 4233 | 5.066117 | TGGCTTTTAACATGTGTCGTACAAA | 59.934 | 36.000 | 0.00 | 0.00 | 43.77 | 2.83 |
3706 | 4234 | 5.623673 | GGCTTTTAACATGTGTCGTACAAAG | 59.376 | 40.000 | 0.00 | 2.21 | 43.77 | 2.77 |
3707 | 4235 | 6.423862 | GCTTTTAACATGTGTCGTACAAAGA | 58.576 | 36.000 | 0.00 | 0.00 | 43.77 | 2.52 |
3708 | 4236 | 6.908284 | GCTTTTAACATGTGTCGTACAAAGAA | 59.092 | 34.615 | 0.00 | 0.00 | 43.77 | 2.52 |
3709 | 4237 | 7.429920 | GCTTTTAACATGTGTCGTACAAAGAAA | 59.570 | 33.333 | 0.00 | 0.00 | 43.77 | 2.52 |
3710 | 4238 | 8.603983 | TTTTAACATGTGTCGTACAAAGAAAC | 57.396 | 30.769 | 0.00 | 0.00 | 43.77 | 2.78 |
3711 | 4239 | 4.806342 | ACATGTGTCGTACAAAGAAACC | 57.194 | 40.909 | 0.00 | 0.00 | 43.77 | 3.27 |
3712 | 4240 | 3.562557 | ACATGTGTCGTACAAAGAAACCC | 59.437 | 43.478 | 0.00 | 0.00 | 43.77 | 4.11 |
3713 | 4241 | 2.203401 | TGTGTCGTACAAAGAAACCCG | 58.797 | 47.619 | 0.00 | 0.00 | 36.06 | 5.28 |
3714 | 4242 | 1.528161 | GTGTCGTACAAAGAAACCCGG | 59.472 | 52.381 | 0.00 | 0.00 | 0.00 | 5.73 |
3715 | 4243 | 1.411977 | TGTCGTACAAAGAAACCCGGA | 59.588 | 47.619 | 0.73 | 0.00 | 0.00 | 5.14 |
3716 | 4244 | 2.037511 | TGTCGTACAAAGAAACCCGGAT | 59.962 | 45.455 | 0.73 | 0.00 | 0.00 | 4.18 |
3717 | 4245 | 3.257873 | TGTCGTACAAAGAAACCCGGATA | 59.742 | 43.478 | 0.73 | 0.00 | 0.00 | 2.59 |
3718 | 4246 | 4.081531 | TGTCGTACAAAGAAACCCGGATAT | 60.082 | 41.667 | 0.73 | 0.00 | 0.00 | 1.63 |
3719 | 4247 | 5.126869 | TGTCGTACAAAGAAACCCGGATATA | 59.873 | 40.000 | 0.73 | 0.00 | 0.00 | 0.86 |
3720 | 4248 | 6.042143 | GTCGTACAAAGAAACCCGGATATAA | 58.958 | 40.000 | 0.73 | 0.00 | 0.00 | 0.98 |
3721 | 4249 | 6.019559 | GTCGTACAAAGAAACCCGGATATAAC | 60.020 | 42.308 | 0.73 | 0.00 | 0.00 | 1.89 |
3722 | 4250 | 6.044682 | CGTACAAAGAAACCCGGATATAACT | 58.955 | 40.000 | 0.73 | 0.00 | 0.00 | 2.24 |
3723 | 4251 | 7.068103 | TCGTACAAAGAAACCCGGATATAACTA | 59.932 | 37.037 | 0.73 | 0.00 | 0.00 | 2.24 |
3724 | 4252 | 7.706179 | CGTACAAAGAAACCCGGATATAACTAA | 59.294 | 37.037 | 0.73 | 0.00 | 0.00 | 2.24 |
3725 | 4253 | 9.382275 | GTACAAAGAAACCCGGATATAACTAAA | 57.618 | 33.333 | 0.73 | 0.00 | 0.00 | 1.85 |
3727 | 4255 | 8.899771 | ACAAAGAAACCCGGATATAACTAAATG | 58.100 | 33.333 | 0.73 | 0.00 | 0.00 | 2.32 |
3728 | 4256 | 8.899771 | CAAAGAAACCCGGATATAACTAAATGT | 58.100 | 33.333 | 0.73 | 0.00 | 0.00 | 2.71 |
3729 | 4257 | 8.446599 | AAGAAACCCGGATATAACTAAATGTG | 57.553 | 34.615 | 0.73 | 0.00 | 0.00 | 3.21 |
3730 | 4258 | 6.485648 | AGAAACCCGGATATAACTAAATGTGC | 59.514 | 38.462 | 0.73 | 0.00 | 0.00 | 4.57 |
3731 | 4259 | 5.298989 | ACCCGGATATAACTAAATGTGCA | 57.701 | 39.130 | 0.73 | 0.00 | 0.00 | 4.57 |
3732 | 4260 | 5.686753 | ACCCGGATATAACTAAATGTGCAA | 58.313 | 37.500 | 0.73 | 0.00 | 0.00 | 4.08 |
3733 | 4261 | 5.529800 | ACCCGGATATAACTAAATGTGCAAC | 59.470 | 40.000 | 0.73 | 0.00 | 37.35 | 4.17 |
3757 | 4285 | 7.426410 | ACAGTAGATATGTTGGACTTATGTCG | 58.574 | 38.462 | 2.93 | 0.00 | 43.79 | 4.35 |
3758 | 4286 | 7.284716 | ACAGTAGATATGTTGGACTTATGTCGA | 59.715 | 37.037 | 2.93 | 0.00 | 43.79 | 4.20 |
3759 | 4287 | 8.135529 | CAGTAGATATGTTGGACTTATGTCGAA | 58.864 | 37.037 | 2.62 | 2.62 | 43.79 | 3.71 |
3760 | 4288 | 8.353684 | AGTAGATATGTTGGACTTATGTCGAAG | 58.646 | 37.037 | 6.47 | 0.00 | 43.79 | 3.79 |
3761 | 4289 | 7.348080 | AGATATGTTGGACTTATGTCGAAGA | 57.652 | 36.000 | 6.47 | 6.21 | 43.79 | 2.87 |
3762 | 4290 | 7.782049 | AGATATGTTGGACTTATGTCGAAGAA | 58.218 | 34.615 | 6.47 | 0.44 | 43.79 | 2.52 |
3763 | 4291 | 8.258007 | AGATATGTTGGACTTATGTCGAAGAAA | 58.742 | 33.333 | 6.47 | 0.00 | 43.79 | 2.52 |
3764 | 4292 | 6.727824 | ATGTTGGACTTATGTCGAAGAAAG | 57.272 | 37.500 | 6.47 | 0.00 | 43.79 | 2.62 |
3765 | 4293 | 5.607477 | TGTTGGACTTATGTCGAAGAAAGT | 58.393 | 37.500 | 6.47 | 7.12 | 43.79 | 2.66 |
3766 | 4294 | 5.694910 | TGTTGGACTTATGTCGAAGAAAGTC | 59.305 | 40.000 | 19.31 | 19.31 | 45.76 | 3.01 |
3770 | 4298 | 6.396459 | GACTTATGTCGAAGAAAGTCCTTG | 57.604 | 41.667 | 17.79 | 0.00 | 42.69 | 3.61 |
3771 | 4299 | 5.238583 | ACTTATGTCGAAGAAAGTCCTTGG | 58.761 | 41.667 | 0.00 | 0.00 | 39.69 | 3.61 |
3772 | 4300 | 1.878953 | TGTCGAAGAAAGTCCTTGGC | 58.121 | 50.000 | 0.00 | 0.00 | 39.69 | 4.52 |
3773 | 4301 | 1.140052 | TGTCGAAGAAAGTCCTTGGCA | 59.860 | 47.619 | 0.00 | 0.00 | 39.69 | 4.92 |
3774 | 4302 | 1.801178 | GTCGAAGAAAGTCCTTGGCAG | 59.199 | 52.381 | 0.00 | 0.00 | 39.69 | 4.85 |
3775 | 4303 | 1.691976 | TCGAAGAAAGTCCTTGGCAGA | 59.308 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
3776 | 4304 | 2.072298 | CGAAGAAAGTCCTTGGCAGAG | 58.928 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
3777 | 4305 | 2.431454 | GAAGAAAGTCCTTGGCAGAGG | 58.569 | 52.381 | 8.80 | 8.80 | 38.20 | 3.69 |
3778 | 4306 | 1.734655 | AGAAAGTCCTTGGCAGAGGA | 58.265 | 50.000 | 12.50 | 12.50 | 43.47 | 3.71 |
3779 | 4307 | 1.627834 | AGAAAGTCCTTGGCAGAGGAG | 59.372 | 52.381 | 15.70 | 0.00 | 46.18 | 3.69 |
3780 | 4308 | 1.625818 | GAAAGTCCTTGGCAGAGGAGA | 59.374 | 52.381 | 15.70 | 0.00 | 46.18 | 3.71 |
3781 | 4309 | 1.274712 | AAGTCCTTGGCAGAGGAGAG | 58.725 | 55.000 | 15.70 | 0.00 | 46.18 | 3.20 |
3782 | 4310 | 1.220477 | GTCCTTGGCAGAGGAGAGC | 59.780 | 63.158 | 15.70 | 4.59 | 46.18 | 4.09 |
3783 | 4311 | 1.229304 | TCCTTGGCAGAGGAGAGCA | 60.229 | 57.895 | 12.50 | 0.00 | 40.87 | 4.26 |
3784 | 4312 | 0.837691 | TCCTTGGCAGAGGAGAGCAA | 60.838 | 55.000 | 12.50 | 0.00 | 40.87 | 3.91 |
3785 | 4313 | 0.037303 | CCTTGGCAGAGGAGAGCAAA | 59.963 | 55.000 | 9.32 | 0.00 | 39.25 | 3.68 |
3786 | 4314 | 1.163554 | CTTGGCAGAGGAGAGCAAAC | 58.836 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
3787 | 4315 | 0.250901 | TTGGCAGAGGAGAGCAAACC | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3788 | 4316 | 1.377856 | GGCAGAGGAGAGCAAACCC | 60.378 | 63.158 | 0.00 | 0.00 | 0.00 | 4.11 |
3789 | 4317 | 1.682257 | GCAGAGGAGAGCAAACCCT | 59.318 | 57.895 | 0.00 | 0.00 | 0.00 | 4.34 |
3790 | 4318 | 0.905357 | GCAGAGGAGAGCAAACCCTA | 59.095 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3791 | 4319 | 1.279271 | GCAGAGGAGAGCAAACCCTAA | 59.721 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
3792 | 4320 | 2.679349 | GCAGAGGAGAGCAAACCCTAAG | 60.679 | 54.545 | 0.00 | 0.00 | 0.00 | 2.18 |
3793 | 4321 | 2.569404 | CAGAGGAGAGCAAACCCTAAGT | 59.431 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3794 | 4322 | 2.835156 | AGAGGAGAGCAAACCCTAAGTC | 59.165 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3795 | 4323 | 2.567615 | GAGGAGAGCAAACCCTAAGTCA | 59.432 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3796 | 4324 | 3.185455 | AGGAGAGCAAACCCTAAGTCAT | 58.815 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
3797 | 4325 | 3.054802 | AGGAGAGCAAACCCTAAGTCATG | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 3.07 |
3798 | 4326 | 3.055094 | GGAGAGCAAACCCTAAGTCATGA | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 3.07 |
3799 | 4327 | 4.187694 | GAGAGCAAACCCTAAGTCATGAG | 58.812 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
3800 | 4328 | 3.840666 | AGAGCAAACCCTAAGTCATGAGA | 59.159 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
3801 | 4329 | 3.935828 | GAGCAAACCCTAAGTCATGAGAC | 59.064 | 47.826 | 0.00 | 0.00 | 45.31 | 3.36 |
3802 | 4330 | 3.010420 | GCAAACCCTAAGTCATGAGACC | 58.990 | 50.000 | 0.00 | 0.00 | 46.15 | 3.85 |
3803 | 4331 | 3.307762 | GCAAACCCTAAGTCATGAGACCT | 60.308 | 47.826 | 0.00 | 0.00 | 46.15 | 3.85 |
3804 | 4332 | 4.081087 | GCAAACCCTAAGTCATGAGACCTA | 60.081 | 45.833 | 0.00 | 0.00 | 46.15 | 3.08 |
3805 | 4333 | 5.420409 | CAAACCCTAAGTCATGAGACCTAC | 58.580 | 45.833 | 0.00 | 0.00 | 46.15 | 3.18 |
3806 | 4334 | 4.611564 | ACCCTAAGTCATGAGACCTACT | 57.388 | 45.455 | 0.00 | 0.00 | 46.15 | 2.57 |
3807 | 4335 | 4.282496 | ACCCTAAGTCATGAGACCTACTG | 58.718 | 47.826 | 0.00 | 0.00 | 46.15 | 2.74 |
3808 | 4336 | 3.639094 | CCCTAAGTCATGAGACCTACTGG | 59.361 | 52.174 | 0.00 | 0.00 | 46.15 | 4.00 |
3809 | 4337 | 4.537751 | CCTAAGTCATGAGACCTACTGGA | 58.462 | 47.826 | 0.00 | 0.00 | 46.15 | 3.86 |
3810 | 4338 | 5.144100 | CCTAAGTCATGAGACCTACTGGAT | 58.856 | 45.833 | 0.00 | 0.00 | 46.15 | 3.41 |
3811 | 4339 | 6.307776 | CCTAAGTCATGAGACCTACTGGATA | 58.692 | 44.000 | 0.00 | 0.00 | 46.15 | 2.59 |
3812 | 4340 | 6.778069 | CCTAAGTCATGAGACCTACTGGATAA | 59.222 | 42.308 | 0.00 | 0.00 | 46.15 | 1.75 |
3813 | 4341 | 7.287927 | CCTAAGTCATGAGACCTACTGGATAAA | 59.712 | 40.741 | 0.00 | 0.00 | 46.15 | 1.40 |
3814 | 4342 | 7.496346 | AAGTCATGAGACCTACTGGATAAAA | 57.504 | 36.000 | 0.00 | 0.00 | 46.15 | 1.52 |
3815 | 4343 | 6.879400 | AGTCATGAGACCTACTGGATAAAAC | 58.121 | 40.000 | 0.00 | 0.00 | 46.15 | 2.43 |
3816 | 4344 | 6.670027 | AGTCATGAGACCTACTGGATAAAACT | 59.330 | 38.462 | 0.00 | 0.00 | 46.15 | 2.66 |
3817 | 4345 | 7.181125 | AGTCATGAGACCTACTGGATAAAACTT | 59.819 | 37.037 | 0.00 | 0.00 | 46.15 | 2.66 |
3818 | 4346 | 7.824779 | GTCATGAGACCTACTGGATAAAACTTT | 59.175 | 37.037 | 0.00 | 0.00 | 38.89 | 2.66 |
3819 | 4347 | 8.041323 | TCATGAGACCTACTGGATAAAACTTTC | 58.959 | 37.037 | 0.00 | 0.00 | 37.04 | 2.62 |
3820 | 4348 | 7.311092 | TGAGACCTACTGGATAAAACTTTCA | 57.689 | 36.000 | 0.00 | 0.00 | 37.04 | 2.69 |
3821 | 4349 | 7.918076 | TGAGACCTACTGGATAAAACTTTCAT | 58.082 | 34.615 | 0.00 | 0.00 | 37.04 | 2.57 |
3822 | 4350 | 7.824289 | TGAGACCTACTGGATAAAACTTTCATG | 59.176 | 37.037 | 0.00 | 0.00 | 37.04 | 3.07 |
3823 | 4351 | 6.599638 | AGACCTACTGGATAAAACTTTCATGC | 59.400 | 38.462 | 0.00 | 0.00 | 37.04 | 4.06 |
3824 | 4352 | 6.485171 | ACCTACTGGATAAAACTTTCATGCT | 58.515 | 36.000 | 0.00 | 0.00 | 37.04 | 3.79 |
3825 | 4353 | 6.375455 | ACCTACTGGATAAAACTTTCATGCTG | 59.625 | 38.462 | 0.00 | 0.00 | 37.04 | 4.41 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 4.924305 | ATGCAGGCGTAATGATGAATTT | 57.076 | 36.364 | 0.00 | 0.00 | 0.00 | 1.82 |
23 | 24 | 6.262944 | TCTTTATCAAATGCAGGCGTAATGAT | 59.737 | 34.615 | 14.93 | 14.93 | 0.00 | 2.45 |
29 | 30 | 3.609853 | TCTCTTTATCAAATGCAGGCGT | 58.390 | 40.909 | 0.00 | 0.00 | 0.00 | 5.68 |
30 | 31 | 3.547613 | GCTCTCTTTATCAAATGCAGGCG | 60.548 | 47.826 | 0.00 | 0.00 | 0.00 | 5.52 |
51 | 52 | 4.723309 | AGGGGATCTGAATAATGACTTGC | 58.277 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
57 | 58 | 7.013083 | CAGACAAAAGAGGGGATCTGAATAATG | 59.987 | 40.741 | 0.00 | 0.00 | 38.67 | 1.90 |
60 | 61 | 5.488919 | ACAGACAAAAGAGGGGATCTGAATA | 59.511 | 40.000 | 6.08 | 0.00 | 38.67 | 1.75 |
81 | 82 | 5.794894 | TCTCCCTTAAGCAACTAAGAACAG | 58.205 | 41.667 | 0.00 | 0.00 | 31.59 | 3.16 |
116 | 118 | 7.640597 | ATGGTAAGATGATCATATGCCAATG | 57.359 | 36.000 | 24.78 | 0.00 | 30.51 | 2.82 |
117 | 119 | 9.931698 | ATAATGGTAAGATGATCATATGCCAAT | 57.068 | 29.630 | 24.78 | 20.92 | 30.51 | 3.16 |
187 | 189 | 7.493320 | CCACACAGTTAGTCAAAAGTACAGTAA | 59.507 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
190 | 192 | 6.018994 | GTCCACACAGTTAGTCAAAAGTACAG | 60.019 | 42.308 | 0.00 | 0.00 | 0.00 | 2.74 |
277 | 279 | 0.250513 | ATCGGGGTCTTTGTCTCTGC | 59.749 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
283 | 285 | 0.693049 | AGAAGCATCGGGGTCTTTGT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
312 | 314 | 7.546358 | CATGCATGTAAAGGTAATTCTTTGGA | 58.454 | 34.615 | 18.91 | 0.00 | 37.51 | 3.53 |
313 | 315 | 6.256321 | GCATGCATGTAAAGGTAATTCTTTGG | 59.744 | 38.462 | 26.79 | 0.00 | 37.51 | 3.28 |
314 | 316 | 7.037438 | AGCATGCATGTAAAGGTAATTCTTTG | 58.963 | 34.615 | 26.79 | 0.00 | 37.51 | 2.77 |
324 | 326 | 3.373748 | TGTTACGAGCATGCATGTAAAGG | 59.626 | 43.478 | 26.41 | 14.39 | 0.00 | 3.11 |
332 | 334 | 2.455674 | ACTTCTGTTACGAGCATGCA | 57.544 | 45.000 | 21.98 | 0.00 | 0.00 | 3.96 |
341 | 343 | 6.434018 | ACGATGTAGAGGTACTTCTGTTAC | 57.566 | 41.667 | 17.23 | 8.39 | 41.55 | 2.50 |
352 | 354 | 0.456221 | CAAGGCGACGATGTAGAGGT | 59.544 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
364 | 366 | 6.479001 | GCAGTAAAAAGTATATCTCAAGGCGA | 59.521 | 38.462 | 0.00 | 0.00 | 0.00 | 5.54 |
388 | 391 | 3.578272 | TCCGTGTGTTGCAACGGC | 61.578 | 61.111 | 23.79 | 18.76 | 39.70 | 5.68 |
393 | 396 | 1.098869 | AAACATGTCCGTGTGTTGCA | 58.901 | 45.000 | 0.00 | 0.00 | 38.47 | 4.08 |
399 | 402 | 2.258013 | CCGGCAAACATGTCCGTGT | 61.258 | 57.895 | 19.57 | 0.00 | 41.46 | 4.49 |
400 | 403 | 0.951525 | TACCGGCAAACATGTCCGTG | 60.952 | 55.000 | 19.57 | 14.29 | 41.46 | 4.94 |
403 | 406 | 1.883926 | AGTTTACCGGCAAACATGTCC | 59.116 | 47.619 | 27.82 | 4.30 | 40.22 | 4.02 |
405 | 408 | 4.391155 | TCTTAGTTTACCGGCAAACATGT | 58.609 | 39.130 | 27.82 | 13.08 | 40.22 | 3.21 |
406 | 409 | 5.365403 | TTCTTAGTTTACCGGCAAACATG | 57.635 | 39.130 | 27.82 | 17.90 | 40.22 | 3.21 |
415 | 418 | 8.943909 | ATCAGACCTTATTTCTTAGTTTACCG | 57.056 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
426 | 429 | 7.595502 | CACTACGGATGTATCAGACCTTATTTC | 59.404 | 40.741 | 0.00 | 0.00 | 0.00 | 2.17 |
429 | 432 | 5.047943 | GCACTACGGATGTATCAGACCTTAT | 60.048 | 44.000 | 0.00 | 0.00 | 0.00 | 1.73 |
430 | 433 | 4.277672 | GCACTACGGATGTATCAGACCTTA | 59.722 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
434 | 437 | 3.710326 | TGCACTACGGATGTATCAGAC | 57.290 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
436 | 439 | 4.045104 | GTCTTGCACTACGGATGTATCAG | 58.955 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
442 | 445 | 1.995484 | CACTGTCTTGCACTACGGATG | 59.005 | 52.381 | 12.31 | 4.72 | 0.00 | 3.51 |
443 | 446 | 1.618837 | ACACTGTCTTGCACTACGGAT | 59.381 | 47.619 | 12.31 | 0.00 | 0.00 | 4.18 |
445 | 448 | 2.717580 | TACACTGTCTTGCACTACGG | 57.282 | 50.000 | 5.14 | 5.14 | 0.00 | 4.02 |
448 | 451 | 4.566004 | GTGGATTACACTGTCTTGCACTA | 58.434 | 43.478 | 8.03 | 0.00 | 46.72 | 2.74 |
468 | 471 | 5.649395 | AGGAATACAATGTCCACTCAATGTG | 59.351 | 40.000 | 0.00 | 0.00 | 45.80 | 3.21 |
469 | 472 | 5.819991 | AGGAATACAATGTCCACTCAATGT | 58.180 | 37.500 | 0.00 | 0.00 | 36.28 | 2.71 |
470 | 473 | 6.118170 | AGAGGAATACAATGTCCACTCAATG | 58.882 | 40.000 | 0.00 | 0.00 | 36.28 | 2.82 |
471 | 474 | 6.319048 | AGAGGAATACAATGTCCACTCAAT | 57.681 | 37.500 | 0.00 | 0.00 | 36.28 | 2.57 |
472 | 475 | 5.734720 | GAGAGGAATACAATGTCCACTCAA | 58.265 | 41.667 | 10.56 | 0.00 | 45.65 | 3.02 |
473 | 476 | 5.344743 | GAGAGGAATACAATGTCCACTCA | 57.655 | 43.478 | 10.56 | 0.00 | 45.65 | 3.41 |
474 | 477 | 5.344743 | TGAGAGGAATACAATGTCCACTC | 57.655 | 43.478 | 9.13 | 9.13 | 46.20 | 3.51 |
490 | 493 | 9.254133 | CTTGTAATTGTCTATGTGTATGAGAGG | 57.746 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
534 | 537 | 8.035394 | CGTCTAGATATACCCTTTTGTGCATAT | 58.965 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
535 | 538 | 7.014905 | ACGTCTAGATATACCCTTTTGTGCATA | 59.985 | 37.037 | 0.00 | 0.00 | 0.00 | 3.14 |
536 | 539 | 6.183360 | ACGTCTAGATATACCCTTTTGTGCAT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 3.96 |
538 | 541 | 5.598769 | ACGTCTAGATATACCCTTTTGTGC | 58.401 | 41.667 | 0.00 | 0.00 | 0.00 | 4.57 |
614 | 626 | 9.239002 | CCAACATGTCGAAAGTAAATAAAACAA | 57.761 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
615 | 627 | 8.622157 | TCCAACATGTCGAAAGTAAATAAAACA | 58.378 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
616 | 628 | 8.898792 | GTCCAACATGTCGAAAGTAAATAAAAC | 58.101 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
621 | 633 | 7.972832 | TTAGTCCAACATGTCGAAAGTAAAT | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
648 | 660 | 9.693739 | TGGTACATGGATTAACAATTAGTCAAT | 57.306 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
692 | 705 | 1.882623 | ACTAGCCTTTCTTTGCAGTGC | 59.117 | 47.619 | 8.58 | 8.58 | 0.00 | 4.40 |
717 | 730 | 0.244450 | CGTGCCCCGTTGACTAAGTA | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
741 | 755 | 2.028523 | CGCAGATTTCAGTGACATCGTC | 59.971 | 50.000 | 12.48 | 8.16 | 0.00 | 4.20 |
853 | 871 | 1.873572 | GGGAAATGCGTGCGAATGC | 60.874 | 57.895 | 0.00 | 0.00 | 43.20 | 3.56 |
859 | 877 | 3.053291 | TGACCGGGAAATGCGTGC | 61.053 | 61.111 | 6.32 | 0.00 | 0.00 | 5.34 |
890 | 908 | 4.508128 | TACGCCTGCGCTACTGCC | 62.508 | 66.667 | 9.73 | 0.00 | 44.19 | 4.85 |
895 | 923 | 2.584970 | GCATGTACGCCTGCGCTA | 60.585 | 61.111 | 9.73 | 0.79 | 44.19 | 4.26 |
905 | 933 | 0.801067 | GACGACCGACCTGCATGTAC | 60.801 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
914 | 942 | 2.814183 | AATGTCAGCGACGACCGACC | 62.814 | 60.000 | 0.00 | 0.00 | 41.76 | 4.79 |
915 | 943 | 1.007336 | AAATGTCAGCGACGACCGAC | 61.007 | 55.000 | 0.00 | 1.72 | 41.76 | 4.79 |
916 | 944 | 0.319211 | AAAATGTCAGCGACGACCGA | 60.319 | 50.000 | 0.00 | 0.00 | 41.76 | 4.69 |
917 | 945 | 0.093026 | GAAAATGTCAGCGACGACCG | 59.907 | 55.000 | 0.00 | 0.00 | 42.21 | 4.79 |
1236 | 1273 | 1.159713 | GGATCCATTCGCGCATGTGA | 61.160 | 55.000 | 17.27 | 13.75 | 0.00 | 3.58 |
1258 | 1295 | 2.344025 | GATGAGTTTGGTACCGTGGAC | 58.656 | 52.381 | 7.57 | 3.15 | 0.00 | 4.02 |
1329 | 1395 | 2.111669 | CCTGCAGTGCACAGACCA | 59.888 | 61.111 | 21.04 | 8.92 | 37.32 | 4.02 |
1330 | 1396 | 1.963338 | GTCCTGCAGTGCACAGACC | 60.963 | 63.158 | 23.98 | 12.03 | 37.32 | 3.85 |
1331 | 1397 | 2.313172 | CGTCCTGCAGTGCACAGAC | 61.313 | 63.158 | 24.33 | 24.33 | 37.32 | 3.51 |
1503 | 1609 | 3.966026 | CTTCCACTCGTCGCCGTCC | 62.966 | 68.421 | 0.00 | 0.00 | 35.01 | 4.79 |
1579 | 1685 | 1.071019 | CGTCGATCGTGTGGTTCCTG | 61.071 | 60.000 | 15.94 | 0.00 | 34.52 | 3.86 |
1601 | 1707 | 2.584418 | CGCTGGAGCTGGATGACG | 60.584 | 66.667 | 0.00 | 0.00 | 39.32 | 4.35 |
1642 | 1756 | 3.695606 | ACCTGTCGCTCGTGCCAT | 61.696 | 61.111 | 3.52 | 0.00 | 35.36 | 4.40 |
1645 | 1759 | 2.125912 | ATCACCTGTCGCTCGTGC | 60.126 | 61.111 | 0.00 | 0.00 | 0.00 | 5.34 |
1983 | 2442 | 1.202371 | CCATGAACACATGCATGCTCC | 60.202 | 52.381 | 26.53 | 13.32 | 40.33 | 4.70 |
2013 | 2496 | 1.739067 | GTTGGCAGGTACCTGATGAC | 58.261 | 55.000 | 40.26 | 28.55 | 46.30 | 3.06 |
2129 | 2612 | 1.153881 | GAGCAGGTCGTTCCCGTAC | 60.154 | 63.158 | 0.00 | 0.00 | 36.75 | 3.67 |
2249 | 2735 | 1.801913 | GTGCGAGCTAGTGTCGTGG | 60.802 | 63.158 | 15.30 | 0.00 | 39.69 | 4.94 |
2364 | 2856 | 3.712881 | GTTGAGCACGTCACCGGC | 61.713 | 66.667 | 0.00 | 0.00 | 38.78 | 6.13 |
2385 | 2877 | 4.213270 | CAGGAACACGTTGATTAGCTTCAA | 59.787 | 41.667 | 0.00 | 0.00 | 33.32 | 2.69 |
2394 | 2886 | 3.678056 | TTCTAGCAGGAACACGTTGAT | 57.322 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
2400 | 2892 | 5.172205 | CCTAAGAGTTTCTAGCAGGAACAC | 58.828 | 45.833 | 9.19 | 4.20 | 0.00 | 3.32 |
2563 | 3055 | 4.476113 | ACCTGAGAGGATTGAATTCATGGA | 59.524 | 41.667 | 9.40 | 0.00 | 37.67 | 3.41 |
2920 | 3419 | 4.517285 | TGAGCCCAAACAAGAGCTTATAG | 58.483 | 43.478 | 0.00 | 0.00 | 35.23 | 1.31 |
3012 | 3514 | 0.699399 | TTGGAGGGGCGGTAAATTCA | 59.301 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3013 | 3515 | 1.100510 | GTTGGAGGGGCGGTAAATTC | 58.899 | 55.000 | 0.00 | 0.00 | 0.00 | 2.17 |
3023 | 3525 | 3.246112 | TCGTGTGGGTTGGAGGGG | 61.246 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
3147 | 3650 | 1.480954 | GGCGACTTCATGGACTTAGGA | 59.519 | 52.381 | 0.00 | 0.00 | 0.00 | 2.94 |
3168 | 3671 | 6.561294 | AGGGGATTGGTTGAAGATTTTAGAA | 58.439 | 36.000 | 0.00 | 0.00 | 0.00 | 2.10 |
3193 | 3696 | 5.815581 | TGTATTATCCAGTGTTTCTTGCCT | 58.184 | 37.500 | 0.00 | 0.00 | 0.00 | 4.75 |
3208 | 3711 | 4.584743 | CCTTGGGGGCTCTTTTGTATTATC | 59.415 | 45.833 | 0.00 | 0.00 | 0.00 | 1.75 |
3233 | 3740 | 2.356069 | GGTCCAGAAGATCAAATTCCGC | 59.644 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
3310 | 3826 | 1.139520 | GAATGGATGGCGGTTGCAC | 59.860 | 57.895 | 0.00 | 0.00 | 45.35 | 4.57 |
3311 | 3827 | 2.405805 | CGAATGGATGGCGGTTGCA | 61.406 | 57.895 | 0.00 | 0.00 | 45.35 | 4.08 |
3316 | 3835 | 1.527034 | ATGAATCGAATGGATGGCGG | 58.473 | 50.000 | 0.00 | 0.00 | 34.93 | 6.13 |
3326 | 3845 | 3.006247 | TGTGGCGAATGAATGAATCGAA | 58.994 | 40.909 | 0.00 | 0.00 | 38.82 | 3.71 |
3396 | 3915 | 4.881019 | TTGGAGAAAGAGGAGTTCAGAG | 57.119 | 45.455 | 0.00 | 0.00 | 0.00 | 3.35 |
3398 | 3917 | 4.068599 | GGTTTGGAGAAAGAGGAGTTCAG | 58.931 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
3399 | 3918 | 3.458118 | TGGTTTGGAGAAAGAGGAGTTCA | 59.542 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
3465 | 3986 | 5.836821 | TGAGTGTAAGTAGCAAGATCGAT | 57.163 | 39.130 | 0.00 | 0.00 | 0.00 | 3.59 |
3495 | 4020 | 1.543944 | GGTTCAATGGGGGTGCCAAG | 61.544 | 60.000 | 0.00 | 0.00 | 0.00 | 3.61 |
3533 | 4059 | 1.427368 | TGACTTGGTGCCTGGGTATTT | 59.573 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
3543 | 4069 | 1.503542 | CTTGGCGATGACTTGGTGC | 59.496 | 57.895 | 0.00 | 0.00 | 0.00 | 5.01 |
3563 | 4091 | 0.975556 | TGGCTTATCCACTCGCCTGA | 60.976 | 55.000 | 0.00 | 0.00 | 42.90 | 3.86 |
3576 | 4104 | 1.321474 | CGTACTACGGGGATGGCTTA | 58.679 | 55.000 | 0.26 | 0.00 | 38.08 | 3.09 |
3593 | 4121 | 1.066215 | TGTTGTATCATGCTGGAGCGT | 60.066 | 47.619 | 0.00 | 0.00 | 45.83 | 5.07 |
3613 | 4141 | 2.661718 | ACAAAAATCGGACACCAAGGT | 58.338 | 42.857 | 0.00 | 0.00 | 0.00 | 3.50 |
3614 | 4142 | 3.566322 | TGTACAAAAATCGGACACCAAGG | 59.434 | 43.478 | 0.00 | 0.00 | 0.00 | 3.61 |
3615 | 4143 | 4.822036 | TGTACAAAAATCGGACACCAAG | 57.178 | 40.909 | 0.00 | 0.00 | 0.00 | 3.61 |
3616 | 4144 | 5.125739 | ACTTTGTACAAAAATCGGACACCAA | 59.874 | 36.000 | 20.89 | 0.00 | 0.00 | 3.67 |
3617 | 4145 | 4.641094 | ACTTTGTACAAAAATCGGACACCA | 59.359 | 37.500 | 20.89 | 0.00 | 0.00 | 4.17 |
3618 | 4146 | 5.177725 | ACTTTGTACAAAAATCGGACACC | 57.822 | 39.130 | 20.89 | 0.00 | 0.00 | 4.16 |
3619 | 4147 | 6.259638 | TCAACTTTGTACAAAAATCGGACAC | 58.740 | 36.000 | 20.89 | 0.00 | 0.00 | 3.67 |
3620 | 4148 | 6.316640 | TCTCAACTTTGTACAAAAATCGGACA | 59.683 | 34.615 | 20.89 | 0.00 | 0.00 | 4.02 |
3621 | 4149 | 6.721321 | TCTCAACTTTGTACAAAAATCGGAC | 58.279 | 36.000 | 20.89 | 0.00 | 0.00 | 4.79 |
3622 | 4150 | 6.928979 | TCTCAACTTTGTACAAAAATCGGA | 57.071 | 33.333 | 20.89 | 13.51 | 0.00 | 4.55 |
3623 | 4151 | 6.519761 | CGATCTCAACTTTGTACAAAAATCGG | 59.480 | 38.462 | 20.89 | 11.83 | 0.00 | 4.18 |
3624 | 4152 | 7.287950 | TCGATCTCAACTTTGTACAAAAATCG | 58.712 | 34.615 | 20.89 | 22.21 | 0.00 | 3.34 |
3625 | 4153 | 9.055248 | CATCGATCTCAACTTTGTACAAAAATC | 57.945 | 33.333 | 20.89 | 14.43 | 0.00 | 2.17 |
3626 | 4154 | 8.023128 | CCATCGATCTCAACTTTGTACAAAAAT | 58.977 | 33.333 | 20.89 | 10.22 | 0.00 | 1.82 |
3627 | 4155 | 7.359595 | CCATCGATCTCAACTTTGTACAAAAA | 58.640 | 34.615 | 20.89 | 7.21 | 0.00 | 1.94 |
3628 | 4156 | 6.567701 | GCCATCGATCTCAACTTTGTACAAAA | 60.568 | 38.462 | 20.89 | 6.55 | 0.00 | 2.44 |
3629 | 4157 | 5.106712 | GCCATCGATCTCAACTTTGTACAAA | 60.107 | 40.000 | 19.53 | 19.53 | 0.00 | 2.83 |
3630 | 4158 | 4.391830 | GCCATCGATCTCAACTTTGTACAA | 59.608 | 41.667 | 3.59 | 3.59 | 0.00 | 2.41 |
3631 | 4159 | 3.932710 | GCCATCGATCTCAACTTTGTACA | 59.067 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
3632 | 4160 | 3.309954 | GGCCATCGATCTCAACTTTGTAC | 59.690 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
3633 | 4161 | 3.055458 | TGGCCATCGATCTCAACTTTGTA | 60.055 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
3634 | 4162 | 2.290260 | TGGCCATCGATCTCAACTTTGT | 60.290 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
3635 | 4163 | 2.358957 | TGGCCATCGATCTCAACTTTG | 58.641 | 47.619 | 0.00 | 0.00 | 0.00 | 2.77 |
3636 | 4164 | 2.787473 | TGGCCATCGATCTCAACTTT | 57.213 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3637 | 4165 | 2.787473 | TTGGCCATCGATCTCAACTT | 57.213 | 45.000 | 6.09 | 0.00 | 0.00 | 2.66 |
3638 | 4166 | 2.749621 | GTTTTGGCCATCGATCTCAACT | 59.250 | 45.455 | 6.09 | 0.00 | 0.00 | 3.16 |
3639 | 4167 | 2.159379 | GGTTTTGGCCATCGATCTCAAC | 60.159 | 50.000 | 6.09 | 0.00 | 0.00 | 3.18 |
3640 | 4168 | 2.091541 | GGTTTTGGCCATCGATCTCAA | 58.908 | 47.619 | 6.09 | 0.00 | 0.00 | 3.02 |
3641 | 4169 | 1.681780 | GGGTTTTGGCCATCGATCTCA | 60.682 | 52.381 | 6.09 | 0.00 | 0.00 | 3.27 |
3642 | 4170 | 1.025041 | GGGTTTTGGCCATCGATCTC | 58.975 | 55.000 | 6.09 | 0.00 | 0.00 | 2.75 |
3643 | 4171 | 0.331278 | TGGGTTTTGGCCATCGATCT | 59.669 | 50.000 | 6.09 | 0.00 | 0.00 | 2.75 |
3644 | 4172 | 1.067516 | CATGGGTTTTGGCCATCGATC | 59.932 | 52.381 | 6.09 | 0.00 | 0.00 | 3.69 |
3645 | 4173 | 1.113788 | CATGGGTTTTGGCCATCGAT | 58.886 | 50.000 | 6.09 | 0.00 | 0.00 | 3.59 |
3646 | 4174 | 0.038890 | TCATGGGTTTTGGCCATCGA | 59.961 | 50.000 | 6.09 | 0.00 | 0.00 | 3.59 |
3647 | 4175 | 0.894141 | TTCATGGGTTTTGGCCATCG | 59.106 | 50.000 | 6.09 | 0.00 | 0.00 | 3.84 |
3648 | 4176 | 1.405933 | GCTTCATGGGTTTTGGCCATC | 60.406 | 52.381 | 6.09 | 0.00 | 0.00 | 3.51 |
3649 | 4177 | 0.614812 | GCTTCATGGGTTTTGGCCAT | 59.385 | 50.000 | 6.09 | 0.00 | 0.00 | 4.40 |
3650 | 4178 | 0.762082 | TGCTTCATGGGTTTTGGCCA | 60.762 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
3651 | 4179 | 0.396060 | TTGCTTCATGGGTTTTGGCC | 59.604 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
3652 | 4180 | 2.252976 | TTTGCTTCATGGGTTTTGGC | 57.747 | 45.000 | 0.00 | 0.00 | 0.00 | 4.52 |
3653 | 4181 | 3.560896 | CACTTTTGCTTCATGGGTTTTGG | 59.439 | 43.478 | 0.00 | 0.00 | 0.00 | 3.28 |
3654 | 4182 | 4.270808 | GTCACTTTTGCTTCATGGGTTTTG | 59.729 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
3655 | 4183 | 4.441792 | GTCACTTTTGCTTCATGGGTTTT | 58.558 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
3656 | 4184 | 3.490761 | CGTCACTTTTGCTTCATGGGTTT | 60.491 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
3657 | 4185 | 2.034558 | CGTCACTTTTGCTTCATGGGTT | 59.965 | 45.455 | 0.00 | 0.00 | 0.00 | 4.11 |
3658 | 4186 | 1.608590 | CGTCACTTTTGCTTCATGGGT | 59.391 | 47.619 | 0.00 | 0.00 | 0.00 | 4.51 |
3659 | 4187 | 1.879380 | TCGTCACTTTTGCTTCATGGG | 59.121 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
3660 | 4188 | 3.624326 | TTCGTCACTTTTGCTTCATGG | 57.376 | 42.857 | 0.00 | 0.00 | 0.00 | 3.66 |
3661 | 4189 | 3.916172 | CCATTCGTCACTTTTGCTTCATG | 59.084 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
3662 | 4190 | 3.612479 | GCCATTCGTCACTTTTGCTTCAT | 60.612 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3663 | 4191 | 2.287547 | GCCATTCGTCACTTTTGCTTCA | 60.288 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
3664 | 4192 | 2.030805 | AGCCATTCGTCACTTTTGCTTC | 60.031 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
3665 | 4193 | 1.956477 | AGCCATTCGTCACTTTTGCTT | 59.044 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
3666 | 4194 | 1.609208 | AGCCATTCGTCACTTTTGCT | 58.391 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3667 | 4195 | 2.422276 | AAGCCATTCGTCACTTTTGC | 57.578 | 45.000 | 0.00 | 0.00 | 0.00 | 3.68 |
3668 | 4196 | 5.746245 | TGTTAAAAGCCATTCGTCACTTTTG | 59.254 | 36.000 | 9.24 | 0.00 | 41.21 | 2.44 |
3669 | 4197 | 5.897050 | TGTTAAAAGCCATTCGTCACTTTT | 58.103 | 33.333 | 0.00 | 0.00 | 42.99 | 2.27 |
3670 | 4198 | 5.508200 | TGTTAAAAGCCATTCGTCACTTT | 57.492 | 34.783 | 0.00 | 0.00 | 33.92 | 2.66 |
3671 | 4199 | 5.009610 | ACATGTTAAAAGCCATTCGTCACTT | 59.990 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3672 | 4200 | 4.518970 | ACATGTTAAAAGCCATTCGTCACT | 59.481 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
3673 | 4201 | 4.616802 | CACATGTTAAAAGCCATTCGTCAC | 59.383 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
3674 | 4202 | 4.277174 | ACACATGTTAAAAGCCATTCGTCA | 59.723 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
3675 | 4203 | 4.794169 | ACACATGTTAAAAGCCATTCGTC | 58.206 | 39.130 | 0.00 | 0.00 | 0.00 | 4.20 |
3676 | 4204 | 4.612712 | CGACACATGTTAAAAGCCATTCGT | 60.613 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
3677 | 4205 | 3.845775 | CGACACATGTTAAAAGCCATTCG | 59.154 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
3678 | 4206 | 4.794169 | ACGACACATGTTAAAAGCCATTC | 58.206 | 39.130 | 0.00 | 0.00 | 0.00 | 2.67 |
3679 | 4207 | 4.846779 | ACGACACATGTTAAAAGCCATT | 57.153 | 36.364 | 0.00 | 0.00 | 0.00 | 3.16 |
3680 | 4208 | 4.757657 | TGTACGACACATGTTAAAAGCCAT | 59.242 | 37.500 | 0.00 | 0.00 | 30.04 | 4.40 |
3681 | 4209 | 4.127907 | TGTACGACACATGTTAAAAGCCA | 58.872 | 39.130 | 0.00 | 0.00 | 30.04 | 4.75 |
3682 | 4210 | 4.735662 | TGTACGACACATGTTAAAAGCC | 57.264 | 40.909 | 0.00 | 0.00 | 30.04 | 4.35 |
3683 | 4211 | 6.423862 | TCTTTGTACGACACATGTTAAAAGC | 58.576 | 36.000 | 0.00 | 0.00 | 36.90 | 3.51 |
3684 | 4212 | 8.730427 | GTTTCTTTGTACGACACATGTTAAAAG | 58.270 | 33.333 | 0.00 | 0.00 | 36.90 | 2.27 |
3685 | 4213 | 7.697291 | GGTTTCTTTGTACGACACATGTTAAAA | 59.303 | 33.333 | 0.00 | 0.00 | 36.90 | 1.52 |
3686 | 4214 | 7.188157 | GGTTTCTTTGTACGACACATGTTAAA | 58.812 | 34.615 | 0.00 | 0.00 | 36.90 | 1.52 |
3687 | 4215 | 6.238429 | GGGTTTCTTTGTACGACACATGTTAA | 60.238 | 38.462 | 0.00 | 0.00 | 36.90 | 2.01 |
3688 | 4216 | 5.236911 | GGGTTTCTTTGTACGACACATGTTA | 59.763 | 40.000 | 0.00 | 0.00 | 36.90 | 2.41 |
3689 | 4217 | 4.035909 | GGGTTTCTTTGTACGACACATGTT | 59.964 | 41.667 | 0.00 | 0.00 | 36.90 | 2.71 |
3690 | 4218 | 3.562557 | GGGTTTCTTTGTACGACACATGT | 59.437 | 43.478 | 0.00 | 0.00 | 36.90 | 3.21 |
3691 | 4219 | 3.363575 | CGGGTTTCTTTGTACGACACATG | 60.364 | 47.826 | 0.00 | 0.00 | 36.90 | 3.21 |
3692 | 4220 | 2.803956 | CGGGTTTCTTTGTACGACACAT | 59.196 | 45.455 | 0.00 | 0.00 | 36.90 | 3.21 |
3693 | 4221 | 2.203401 | CGGGTTTCTTTGTACGACACA | 58.797 | 47.619 | 0.00 | 0.00 | 34.51 | 3.72 |
3694 | 4222 | 1.528161 | CCGGGTTTCTTTGTACGACAC | 59.472 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
3695 | 4223 | 1.411977 | TCCGGGTTTCTTTGTACGACA | 59.588 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
3696 | 4224 | 2.153366 | TCCGGGTTTCTTTGTACGAC | 57.847 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
3697 | 4225 | 4.741321 | ATATCCGGGTTTCTTTGTACGA | 57.259 | 40.909 | 0.00 | 0.00 | 0.00 | 3.43 |
3698 | 4226 | 6.044682 | AGTTATATCCGGGTTTCTTTGTACG | 58.955 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3699 | 4227 | 8.947055 | TTAGTTATATCCGGGTTTCTTTGTAC | 57.053 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
3701 | 4229 | 8.899771 | CATTTAGTTATATCCGGGTTTCTTTGT | 58.100 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
3702 | 4230 | 8.899771 | ACATTTAGTTATATCCGGGTTTCTTTG | 58.100 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
3703 | 4231 | 8.899771 | CACATTTAGTTATATCCGGGTTTCTTT | 58.100 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
3704 | 4232 | 7.012989 | GCACATTTAGTTATATCCGGGTTTCTT | 59.987 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
3705 | 4233 | 6.485648 | GCACATTTAGTTATATCCGGGTTTCT | 59.514 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
3706 | 4234 | 6.261381 | TGCACATTTAGTTATATCCGGGTTTC | 59.739 | 38.462 | 0.00 | 0.00 | 0.00 | 2.78 |
3707 | 4235 | 6.123651 | TGCACATTTAGTTATATCCGGGTTT | 58.876 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3708 | 4236 | 5.686753 | TGCACATTTAGTTATATCCGGGTT | 58.313 | 37.500 | 0.00 | 0.00 | 0.00 | 4.11 |
3709 | 4237 | 5.298989 | TGCACATTTAGTTATATCCGGGT | 57.701 | 39.130 | 0.00 | 0.00 | 0.00 | 5.28 |
3710 | 4238 | 5.529430 | TGTTGCACATTTAGTTATATCCGGG | 59.471 | 40.000 | 0.00 | 0.00 | 0.00 | 5.73 |
3711 | 4239 | 6.260050 | ACTGTTGCACATTTAGTTATATCCGG | 59.740 | 38.462 | 0.00 | 0.00 | 0.00 | 5.14 |
3712 | 4240 | 7.246674 | ACTGTTGCACATTTAGTTATATCCG | 57.753 | 36.000 | 0.00 | 0.00 | 0.00 | 4.18 |
3713 | 4241 | 9.542462 | TCTACTGTTGCACATTTAGTTATATCC | 57.458 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
3718 | 4246 | 9.884636 | ACATATCTACTGTTGCACATTTAGTTA | 57.115 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
3719 | 4247 | 8.792830 | ACATATCTACTGTTGCACATTTAGTT | 57.207 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
3720 | 4248 | 8.668353 | CAACATATCTACTGTTGCACATTTAGT | 58.332 | 33.333 | 3.53 | 0.00 | 44.78 | 2.24 |
3724 | 4252 | 8.014217 | AGTCCAACATATCTACTGTTGCACATT | 61.014 | 37.037 | 11.52 | 0.00 | 44.20 | 2.71 |
3725 | 4253 | 6.577039 | AGTCCAACATATCTACTGTTGCACAT | 60.577 | 38.462 | 11.52 | 0.00 | 44.20 | 3.21 |
3726 | 4254 | 5.279960 | AGTCCAACATATCTACTGTTGCACA | 60.280 | 40.000 | 11.52 | 0.00 | 44.20 | 4.57 |
3731 | 4259 | 7.921214 | CGACATAAGTCCAACATATCTACTGTT | 59.079 | 37.037 | 0.00 | 0.00 | 41.87 | 3.16 |
3732 | 4260 | 7.284716 | TCGACATAAGTCCAACATATCTACTGT | 59.715 | 37.037 | 0.00 | 0.00 | 41.87 | 3.55 |
3733 | 4261 | 7.649057 | TCGACATAAGTCCAACATATCTACTG | 58.351 | 38.462 | 0.00 | 0.00 | 41.87 | 2.74 |
3734 | 4262 | 7.818997 | TCGACATAAGTCCAACATATCTACT | 57.181 | 36.000 | 0.00 | 0.00 | 41.87 | 2.57 |
3735 | 4263 | 8.350722 | TCTTCGACATAAGTCCAACATATCTAC | 58.649 | 37.037 | 0.00 | 0.00 | 41.87 | 2.59 |
3736 | 4264 | 8.459911 | TCTTCGACATAAGTCCAACATATCTA | 57.540 | 34.615 | 0.00 | 0.00 | 41.87 | 1.98 |
3737 | 4265 | 7.348080 | TCTTCGACATAAGTCCAACATATCT | 57.652 | 36.000 | 0.00 | 0.00 | 41.87 | 1.98 |
3738 | 4266 | 8.420374 | TTTCTTCGACATAAGTCCAACATATC | 57.580 | 34.615 | 0.00 | 0.00 | 41.87 | 1.63 |
3739 | 4267 | 8.041323 | ACTTTCTTCGACATAAGTCCAACATAT | 58.959 | 33.333 | 0.00 | 0.00 | 41.87 | 1.78 |
3740 | 4268 | 7.383687 | ACTTTCTTCGACATAAGTCCAACATA | 58.616 | 34.615 | 0.00 | 0.00 | 41.87 | 2.29 |
3741 | 4269 | 6.231211 | ACTTTCTTCGACATAAGTCCAACAT | 58.769 | 36.000 | 0.00 | 0.00 | 41.87 | 2.71 |
3742 | 4270 | 5.607477 | ACTTTCTTCGACATAAGTCCAACA | 58.393 | 37.500 | 0.00 | 0.00 | 41.87 | 3.33 |
3743 | 4271 | 6.154451 | GACTTTCTTCGACATAAGTCCAAC | 57.846 | 41.667 | 16.29 | 0.16 | 41.87 | 3.77 |
3747 | 4275 | 5.348997 | CCAAGGACTTTCTTCGACATAAGTC | 59.651 | 44.000 | 17.85 | 17.85 | 43.50 | 3.01 |
3748 | 4276 | 5.238583 | CCAAGGACTTTCTTCGACATAAGT | 58.761 | 41.667 | 5.25 | 5.25 | 33.78 | 2.24 |
3749 | 4277 | 4.093556 | GCCAAGGACTTTCTTCGACATAAG | 59.906 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
3750 | 4278 | 4.000988 | GCCAAGGACTTTCTTCGACATAA | 58.999 | 43.478 | 0.00 | 0.00 | 0.00 | 1.90 |
3751 | 4279 | 3.007506 | TGCCAAGGACTTTCTTCGACATA | 59.992 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
3752 | 4280 | 2.224523 | TGCCAAGGACTTTCTTCGACAT | 60.225 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
3753 | 4281 | 1.140052 | TGCCAAGGACTTTCTTCGACA | 59.860 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
3754 | 4282 | 1.801178 | CTGCCAAGGACTTTCTTCGAC | 59.199 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
3755 | 4283 | 1.691976 | TCTGCCAAGGACTTTCTTCGA | 59.308 | 47.619 | 0.00 | 0.00 | 0.00 | 3.71 |
3756 | 4284 | 2.072298 | CTCTGCCAAGGACTTTCTTCG | 58.928 | 52.381 | 0.00 | 0.00 | 0.00 | 3.79 |
3757 | 4285 | 2.039084 | TCCTCTGCCAAGGACTTTCTTC | 59.961 | 50.000 | 0.13 | 0.00 | 40.60 | 2.87 |
3758 | 4286 | 2.039613 | CTCCTCTGCCAAGGACTTTCTT | 59.960 | 50.000 | 0.13 | 0.00 | 40.60 | 2.52 |
3759 | 4287 | 1.627834 | CTCCTCTGCCAAGGACTTTCT | 59.372 | 52.381 | 0.13 | 0.00 | 40.60 | 2.52 |
3760 | 4288 | 1.625818 | TCTCCTCTGCCAAGGACTTTC | 59.374 | 52.381 | 0.13 | 0.00 | 40.60 | 2.62 |
3761 | 4289 | 1.627834 | CTCTCCTCTGCCAAGGACTTT | 59.372 | 52.381 | 0.13 | 0.00 | 40.60 | 2.66 |
3762 | 4290 | 1.274712 | CTCTCCTCTGCCAAGGACTT | 58.725 | 55.000 | 0.13 | 0.00 | 40.60 | 3.01 |
3763 | 4291 | 1.264045 | GCTCTCCTCTGCCAAGGACT | 61.264 | 60.000 | 0.13 | 0.00 | 40.60 | 3.85 |
3764 | 4292 | 1.220477 | GCTCTCCTCTGCCAAGGAC | 59.780 | 63.158 | 0.13 | 0.00 | 40.60 | 3.85 |
3765 | 4293 | 0.837691 | TTGCTCTCCTCTGCCAAGGA | 60.838 | 55.000 | 4.28 | 4.28 | 43.30 | 3.36 |
3766 | 4294 | 0.037303 | TTTGCTCTCCTCTGCCAAGG | 59.963 | 55.000 | 0.00 | 0.00 | 37.81 | 3.61 |
3767 | 4295 | 1.163554 | GTTTGCTCTCCTCTGCCAAG | 58.836 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
3768 | 4296 | 0.250901 | GGTTTGCTCTCCTCTGCCAA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
3769 | 4297 | 1.376466 | GGTTTGCTCTCCTCTGCCA | 59.624 | 57.895 | 0.00 | 0.00 | 0.00 | 4.92 |
3770 | 4298 | 1.377856 | GGGTTTGCTCTCCTCTGCC | 60.378 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
3771 | 4299 | 0.905357 | TAGGGTTTGCTCTCCTCTGC | 59.095 | 55.000 | 0.00 | 0.00 | 32.46 | 4.26 |
3772 | 4300 | 2.569404 | ACTTAGGGTTTGCTCTCCTCTG | 59.431 | 50.000 | 0.00 | 0.00 | 32.46 | 3.35 |
3773 | 4301 | 2.835156 | GACTTAGGGTTTGCTCTCCTCT | 59.165 | 50.000 | 0.00 | 0.00 | 32.46 | 3.69 |
3774 | 4302 | 2.567615 | TGACTTAGGGTTTGCTCTCCTC | 59.432 | 50.000 | 0.00 | 0.00 | 32.46 | 3.71 |
3775 | 4303 | 2.621070 | TGACTTAGGGTTTGCTCTCCT | 58.379 | 47.619 | 0.00 | 0.00 | 34.85 | 3.69 |
3776 | 4304 | 3.055094 | TCATGACTTAGGGTTTGCTCTCC | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
3777 | 4305 | 4.081420 | TCTCATGACTTAGGGTTTGCTCTC | 60.081 | 45.833 | 0.00 | 0.00 | 0.00 | 3.20 |
3778 | 4306 | 3.840666 | TCTCATGACTTAGGGTTTGCTCT | 59.159 | 43.478 | 0.00 | 0.00 | 0.00 | 4.09 |
3779 | 4307 | 3.935828 | GTCTCATGACTTAGGGTTTGCTC | 59.064 | 47.826 | 0.00 | 0.00 | 39.94 | 4.26 |
3780 | 4308 | 3.307762 | GGTCTCATGACTTAGGGTTTGCT | 60.308 | 47.826 | 0.00 | 0.00 | 42.54 | 3.91 |
3781 | 4309 | 3.010420 | GGTCTCATGACTTAGGGTTTGC | 58.990 | 50.000 | 0.00 | 0.00 | 42.54 | 3.68 |
3782 | 4310 | 4.559862 | AGGTCTCATGACTTAGGGTTTG | 57.440 | 45.455 | 0.00 | 0.00 | 42.54 | 2.93 |
3783 | 4311 | 5.187967 | CAGTAGGTCTCATGACTTAGGGTTT | 59.812 | 44.000 | 0.00 | 0.00 | 42.54 | 3.27 |
3784 | 4312 | 4.712337 | CAGTAGGTCTCATGACTTAGGGTT | 59.288 | 45.833 | 0.00 | 0.00 | 42.54 | 4.11 |
3785 | 4313 | 4.282496 | CAGTAGGTCTCATGACTTAGGGT | 58.718 | 47.826 | 0.00 | 0.00 | 42.54 | 4.34 |
3786 | 4314 | 3.639094 | CCAGTAGGTCTCATGACTTAGGG | 59.361 | 52.174 | 0.00 | 0.00 | 42.54 | 3.53 |
3787 | 4315 | 4.537751 | TCCAGTAGGTCTCATGACTTAGG | 58.462 | 47.826 | 0.00 | 0.00 | 42.54 | 2.69 |
3788 | 4316 | 7.825331 | TTATCCAGTAGGTCTCATGACTTAG | 57.175 | 40.000 | 0.00 | 0.00 | 42.54 | 2.18 |
3789 | 4317 | 8.475639 | GTTTTATCCAGTAGGTCTCATGACTTA | 58.524 | 37.037 | 0.00 | 0.00 | 42.54 | 2.24 |
3790 | 4318 | 7.181125 | AGTTTTATCCAGTAGGTCTCATGACTT | 59.819 | 37.037 | 0.00 | 0.00 | 42.54 | 3.01 |
3791 | 4319 | 6.670027 | AGTTTTATCCAGTAGGTCTCATGACT | 59.330 | 38.462 | 0.00 | 0.00 | 42.54 | 3.41 |
3792 | 4320 | 6.879400 | AGTTTTATCCAGTAGGTCTCATGAC | 58.121 | 40.000 | 0.00 | 0.00 | 42.22 | 3.06 |
3793 | 4321 | 7.496346 | AAGTTTTATCCAGTAGGTCTCATGA | 57.504 | 36.000 | 0.00 | 0.00 | 35.89 | 3.07 |
3794 | 4322 | 7.824289 | TGAAAGTTTTATCCAGTAGGTCTCATG | 59.176 | 37.037 | 0.00 | 0.00 | 35.89 | 3.07 |
3795 | 4323 | 7.918076 | TGAAAGTTTTATCCAGTAGGTCTCAT | 58.082 | 34.615 | 0.00 | 0.00 | 35.89 | 2.90 |
3796 | 4324 | 7.311092 | TGAAAGTTTTATCCAGTAGGTCTCA | 57.689 | 36.000 | 0.00 | 0.00 | 35.89 | 3.27 |
3797 | 4325 | 7.201652 | GCATGAAAGTTTTATCCAGTAGGTCTC | 60.202 | 40.741 | 0.00 | 0.00 | 35.89 | 3.36 |
3798 | 4326 | 6.599638 | GCATGAAAGTTTTATCCAGTAGGTCT | 59.400 | 38.462 | 0.00 | 0.00 | 35.89 | 3.85 |
3799 | 4327 | 6.599638 | AGCATGAAAGTTTTATCCAGTAGGTC | 59.400 | 38.462 | 0.00 | 0.00 | 35.89 | 3.85 |
3800 | 4328 | 6.375455 | CAGCATGAAAGTTTTATCCAGTAGGT | 59.625 | 38.462 | 0.00 | 0.00 | 39.69 | 3.08 |
3801 | 4329 | 6.789262 | CAGCATGAAAGTTTTATCCAGTAGG | 58.211 | 40.000 | 0.00 | 0.00 | 39.69 | 3.18 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.