Multiple sequence alignment - TraesCS5B01G500100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G500100 chr5B 100.000 6683 0 0 1 6683 666207894 666201212 0.000000e+00 12342.0
1 TraesCS5B01G500100 chr5B 97.860 514 11 0 6170 6683 443268526 443268013 0.000000e+00 889.0
2 TraesCS5B01G500100 chr5B 97.461 512 12 1 6172 6683 377630375 377630885 0.000000e+00 872.0
3 TraesCS5B01G500100 chr5B 93.846 130 5 3 5795 5922 145479254 145479126 6.840000e-45 193.0
4 TraesCS5B01G500100 chr5D 93.106 4642 175 48 1 4589 528978943 528974394 0.000000e+00 6665.0
5 TraesCS5B01G500100 chr5D 88.878 1043 59 29 4593 5628 528974356 528973364 0.000000e+00 1230.0
6 TraesCS5B01G500100 chr5D 85.882 170 9 2 5627 5796 528973228 528973074 4.150000e-37 167.0
7 TraesCS5B01G500100 chr5A 91.956 2188 100 30 402 2557 657206031 657203888 0.000000e+00 2996.0
8 TraesCS5B01G500100 chr5A 93.583 1200 60 11 3401 4589 657202949 657201756 0.000000e+00 1773.0
9 TraesCS5B01G500100 chr5A 95.151 763 25 6 2556 3315 657203724 657202971 0.000000e+00 1194.0
10 TraesCS5B01G500100 chr5A 89.427 785 48 19 4852 5627 657201484 657200726 0.000000e+00 957.0
11 TraesCS5B01G500100 chr2B 98.051 513 9 1 6171 6683 10619459 10619970 0.000000e+00 891.0
12 TraesCS5B01G500100 chr2B 92.562 121 9 0 5796 5916 499552945 499552825 2.480000e-39 174.0
13 TraesCS5B01G500100 chr7B 97.860 514 11 0 6170 6683 637862165 637862678 0.000000e+00 889.0
14 TraesCS5B01G500100 chr7B 97.856 513 11 0 6171 6683 698234763 698235275 0.000000e+00 887.0
15 TraesCS5B01G500100 chr2A 97.656 512 12 0 6172 6683 24906700 24906189 0.000000e+00 880.0
16 TraesCS5B01G500100 chr2A 95.763 118 5 0 5796 5913 96153112 96153229 2.460000e-44 191.0
17 TraesCS5B01G500100 chr6A 97.471 514 13 0 6170 6683 522269281 522269794 0.000000e+00 878.0
18 TraesCS5B01G500100 chr6A 91.791 134 9 2 5780 5912 190598700 190598832 1.140000e-42 185.0
19 TraesCS5B01G500100 chr1A 94.695 509 25 1 6174 6680 547394254 547394762 0.000000e+00 789.0
20 TraesCS5B01G500100 chr1A 97.500 40 0 1 3180 3218 561277685 561277646 4.330000e-07 67.6
21 TraesCS5B01G500100 chr7D 96.581 117 4 0 5786 5902 42694737 42694853 1.900000e-45 195.0
22 TraesCS5B01G500100 chr7D 88.525 61 6 1 3169 3228 627538562 627538622 9.300000e-09 73.1
23 TraesCS5B01G500100 chr3B 96.581 117 4 0 5786 5902 48886588 48886472 1.900000e-45 195.0
24 TraesCS5B01G500100 chr3B 94.400 125 5 2 5785 5908 217574975 217575098 2.460000e-44 191.0
25 TraesCS5B01G500100 chr3B 100.000 40 0 0 6170 6209 547129048 547129087 2.580000e-09 75.0
26 TraesCS5B01G500100 chr1D 95.161 124 5 1 5796 5918 279934448 279934325 1.900000e-45 195.0
27 TraesCS5B01G500100 chr1D 88.525 61 6 1 3169 3228 38282434 38282494 9.300000e-09 73.1
28 TraesCS5B01G500100 chr6B 97.297 111 3 0 5792 5902 212571905 212572015 8.850000e-44 189.0
29 TraesCS5B01G500100 chr4D 100.000 31 0 0 3186 3216 96899305 96899275 2.600000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G500100 chr5B 666201212 666207894 6682 True 12342.000000 12342 100.000000 1 6683 1 chr5B.!!$R3 6682
1 TraesCS5B01G500100 chr5B 443268013 443268526 513 True 889.000000 889 97.860000 6170 6683 1 chr5B.!!$R2 513
2 TraesCS5B01G500100 chr5B 377630375 377630885 510 False 872.000000 872 97.461000 6172 6683 1 chr5B.!!$F1 511
3 TraesCS5B01G500100 chr5D 528973074 528978943 5869 True 2687.333333 6665 89.288667 1 5796 3 chr5D.!!$R1 5795
4 TraesCS5B01G500100 chr5A 657200726 657206031 5305 True 1730.000000 2996 92.529250 402 5627 4 chr5A.!!$R1 5225
5 TraesCS5B01G500100 chr2B 10619459 10619970 511 False 891.000000 891 98.051000 6171 6683 1 chr2B.!!$F1 512
6 TraesCS5B01G500100 chr7B 637862165 637862678 513 False 889.000000 889 97.860000 6170 6683 1 chr7B.!!$F1 513
7 TraesCS5B01G500100 chr7B 698234763 698235275 512 False 887.000000 887 97.856000 6171 6683 1 chr7B.!!$F2 512
8 TraesCS5B01G500100 chr2A 24906189 24906700 511 True 880.000000 880 97.656000 6172 6683 1 chr2A.!!$R1 511
9 TraesCS5B01G500100 chr6A 522269281 522269794 513 False 878.000000 878 97.471000 6170 6683 1 chr6A.!!$F2 513
10 TraesCS5B01G500100 chr1A 547394254 547394762 508 False 789.000000 789 94.695000 6174 6680 1 chr1A.!!$F1 506


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
333 339 0.462047 GATGTCATCGACACCCACCC 60.462 60.000 0.00 0.00 45.65 4.61 F
767 796 0.691413 GGAGAGGAAGGGGACGGATT 60.691 60.000 0.00 0.00 0.00 3.01 F
1936 2005 0.395586 TGCTTGAGGCCGGCATTATT 60.396 50.000 30.85 7.62 40.92 1.40 F
2341 2410 3.070734 AGCTCTTCCATGATATGCTTCGT 59.929 43.478 0.00 0.00 0.00 3.85 F
2844 3078 2.154462 CAGGGTTCACAGTTGGATGAC 58.846 52.381 0.00 0.00 0.00 3.06 F
4560 4812 2.119457 GTGCTCGCAAAAAGGAAGTTG 58.881 47.619 0.00 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1921 1990 1.227823 CGGAATAATGCCGGCCTCA 60.228 57.895 26.77 5.45 44.87 3.86 R
2344 2413 2.370189 CTCCATGTCAGGTTCTATCCCC 59.630 54.545 0.00 0.00 0.00 4.81 R
2844 3078 0.659427 CCATGTATGCCTTCACTGCG 59.341 55.000 0.00 0.00 0.00 5.18 R
3914 4156 0.921896 ATAAGCATCAGCCCACCTGT 59.078 50.000 0.00 0.00 43.56 4.00 R
4564 4816 1.064906 AGCATGGTCACAGCAGCTTAT 60.065 47.619 0.00 0.00 30.17 1.73 R
6061 6493 0.039256 AACATGGCAATGACACACGC 60.039 50.000 8.45 0.00 37.24 5.34 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 3.440522 GGAGCACTAGAACAAAATCCACC 59.559 47.826 0.00 0.00 0.00 4.61
132 138 7.321745 AGCAAATATTCCTACAGCAAACTAC 57.678 36.000 0.00 0.00 0.00 2.73
133 139 7.112779 AGCAAATATTCCTACAGCAAACTACT 58.887 34.615 0.00 0.00 0.00 2.57
142 148 6.043411 CCTACAGCAAACTACTAGATTCCAC 58.957 44.000 0.00 0.00 0.00 4.02
146 152 4.020218 AGCAAACTACTAGATTCCACAGCA 60.020 41.667 0.00 0.00 0.00 4.41
147 153 4.878397 GCAAACTACTAGATTCCACAGCAT 59.122 41.667 0.00 0.00 0.00 3.79
152 158 9.765795 AAACTACTAGATTCCACAGCATAATAC 57.234 33.333 0.00 0.00 0.00 1.89
157 163 6.683974 AGATTCCACAGCATAATACAACAC 57.316 37.500 0.00 0.00 0.00 3.32
158 164 4.937696 TTCCACAGCATAATACAACACG 57.062 40.909 0.00 0.00 0.00 4.49
159 165 3.266636 TCCACAGCATAATACAACACGG 58.733 45.455 0.00 0.00 0.00 4.94
160 166 3.006940 CCACAGCATAATACAACACGGT 58.993 45.455 0.00 0.00 0.00 4.83
161 167 4.081586 TCCACAGCATAATACAACACGGTA 60.082 41.667 0.00 0.00 0.00 4.02
162 168 4.033587 CCACAGCATAATACAACACGGTAC 59.966 45.833 0.00 0.00 0.00 3.34
171 177 6.824305 AATACAACACGGTACTAGTACAGT 57.176 37.500 29.38 28.09 43.39 3.55
176 182 6.128172 ACAACACGGTACTAGTACAGTATCAC 60.128 42.308 30.15 13.71 40.41 3.06
191 197 9.185680 GTACAGTATCACCCAATTTCCTTATTT 57.814 33.333 0.00 0.00 0.00 1.40
192 198 8.664669 ACAGTATCACCCAATTTCCTTATTTT 57.335 30.769 0.00 0.00 0.00 1.82
225 231 6.572182 AGAAGAATCTGAAGATGATTCCCA 57.428 37.500 11.39 0.00 46.43 4.37
240 246 4.020573 TGATTCCCACACACGATAGACTTT 60.021 41.667 0.00 0.00 41.38 2.66
243 249 4.813027 TCCCACACACGATAGACTTTAAC 58.187 43.478 0.00 0.00 41.38 2.01
244 250 4.281435 TCCCACACACGATAGACTTTAACA 59.719 41.667 0.00 0.00 41.38 2.41
245 251 4.625742 CCCACACACGATAGACTTTAACAG 59.374 45.833 0.00 0.00 41.38 3.16
260 266 8.087750 AGACTTTAACAGTTGAGAGATTCTGAG 58.912 37.037 0.00 0.00 35.01 3.35
275 281 2.688507 TCTGAGACCGCATTCAAGTTC 58.311 47.619 0.00 0.00 0.00 3.01
311 317 2.125269 GTAATGCTCACGCGGGGT 60.125 61.111 9.32 0.00 39.65 4.95
332 338 3.065575 GATGTCATCGACACCCACC 57.934 57.895 0.00 0.00 45.65 4.61
333 339 0.462047 GATGTCATCGACACCCACCC 60.462 60.000 0.00 0.00 45.65 4.61
363 369 2.670509 GCGCCTACCGGATTCATAGTAC 60.671 54.545 9.46 0.00 37.44 2.73
364 370 2.818432 CGCCTACCGGATTCATAGTACT 59.182 50.000 9.46 0.00 0.00 2.73
377 383 1.319541 TAGTACTCATCGGCTGCCTC 58.680 55.000 17.92 0.00 0.00 4.70
404 410 3.046870 ATCGAGCAGAGGCCGATC 58.953 61.111 0.00 0.00 44.47 3.69
405 411 2.569354 ATCGAGCAGAGGCCGATCC 61.569 63.158 0.00 0.00 44.47 3.36
447 453 2.203938 AAGGCGGGAGGGTGAGAA 60.204 61.111 0.00 0.00 0.00 2.87
448 454 2.294078 AAGGCGGGAGGGTGAGAAG 61.294 63.158 0.00 0.00 0.00 2.85
449 455 3.787001 GGCGGGAGGGTGAGAAGG 61.787 72.222 0.00 0.00 0.00 3.46
595 609 1.579932 GCGACAGACGAGGAAGACA 59.420 57.895 0.00 0.00 45.77 3.41
687 701 1.602920 GGAAACCTCCAAAGCGCAAAG 60.603 52.381 11.47 0.00 41.96 2.77
767 796 0.691413 GGAGAGGAAGGGGACGGATT 60.691 60.000 0.00 0.00 0.00 3.01
771 800 2.023307 AGAGGAAGGGGACGGATTTAGA 60.023 50.000 0.00 0.00 0.00 2.10
781 810 2.973052 GATTTAGAGGCGGCGGGC 60.973 66.667 9.78 10.04 42.51 6.13
868 915 1.141657 TGCTGCTTCTGTTCTGGACTT 59.858 47.619 0.00 0.00 0.00 3.01
869 916 1.803555 GCTGCTTCTGTTCTGGACTTC 59.196 52.381 0.00 0.00 0.00 3.01
870 917 2.549778 GCTGCTTCTGTTCTGGACTTCT 60.550 50.000 0.00 0.00 0.00 2.85
871 918 3.306364 GCTGCTTCTGTTCTGGACTTCTA 60.306 47.826 0.00 0.00 0.00 2.10
872 919 4.800914 GCTGCTTCTGTTCTGGACTTCTAA 60.801 45.833 0.00 0.00 0.00 2.10
969 1021 1.612442 TTCCTCCTCCCAACTCCCG 60.612 63.158 0.00 0.00 0.00 5.14
1107 1176 4.517703 CGTCGCCTCCTCGTCGTC 62.518 72.222 0.00 0.00 36.56 4.20
1108 1177 4.176851 GTCGCCTCCTCGTCGTCC 62.177 72.222 0.00 0.00 0.00 4.79
1109 1178 4.405671 TCGCCTCCTCGTCGTCCT 62.406 66.667 0.00 0.00 0.00 3.85
1110 1179 2.513204 CGCCTCCTCGTCGTCCTA 60.513 66.667 0.00 0.00 0.00 2.94
1122 1191 2.159043 CGTCGTCCTACTCCTACCACTA 60.159 54.545 0.00 0.00 0.00 2.74
1816 1885 4.148825 GAGATGCGCCACGACCCT 62.149 66.667 4.18 0.00 0.00 4.34
1921 1990 3.744719 CTGCTGCGCACCATGCTT 61.745 61.111 18.56 0.00 42.25 3.91
1936 2005 0.395586 TGCTTGAGGCCGGCATTATT 60.396 50.000 30.85 7.62 40.92 1.40
2290 2359 3.937814 TGTGCTCTTCAATGTATTCGGT 58.062 40.909 0.00 0.00 0.00 4.69
2341 2410 3.070734 AGCTCTTCCATGATATGCTTCGT 59.929 43.478 0.00 0.00 0.00 3.85
2344 2413 4.546570 TCTTCCATGATATGCTTCGTACG 58.453 43.478 9.53 9.53 0.00 3.67
2544 2613 4.327357 CAGTCTACGAACCAAATACTGCTG 59.673 45.833 0.00 0.00 0.00 4.41
2545 2614 4.021368 AGTCTACGAACCAAATACTGCTGT 60.021 41.667 0.66 0.66 0.00 4.40
2546 2615 5.184479 AGTCTACGAACCAAATACTGCTGTA 59.816 40.000 5.87 5.87 0.00 2.74
2547 2616 5.515626 GTCTACGAACCAAATACTGCTGTAG 59.484 44.000 9.44 0.00 31.51 2.74
2844 3078 2.154462 CAGGGTTCACAGTTGGATGAC 58.846 52.381 0.00 0.00 0.00 3.06
3068 3302 6.594159 AGGTATTGGTCAAACAGAACTATTCG 59.406 38.462 0.00 0.00 34.06 3.34
3146 3380 5.231991 GCAAACATTGAAACGAAATCTGTGT 59.768 36.000 0.00 0.00 0.00 3.72
3219 3453 7.615582 TCAGTTAGATAAATCACAAAGCTGG 57.384 36.000 0.00 0.00 0.00 4.85
3261 3495 2.242926 ACAAGCAGACTAGCTCACTGA 58.757 47.619 15.60 0.00 45.89 3.41
3306 3540 4.390129 ACTCTGGACCTTCAGTTAGAGA 57.610 45.455 9.18 0.00 40.13 3.10
3326 3562 9.947433 TTAGAGACCGGTCATCTTTTTATTTTA 57.053 29.630 35.00 13.43 0.00 1.52
3369 3605 5.876357 AGTTTGAACTAGCAAGGGAACATA 58.124 37.500 0.00 0.00 37.52 2.29
3379 3615 4.837860 AGCAAGGGAACATAAATCCAAACA 59.162 37.500 0.00 0.00 38.80 2.83
3408 3644 2.866762 GTTGCTCGTCTGTTCTTTCAGT 59.133 45.455 0.00 0.00 36.85 3.41
3445 3681 6.596888 GGCATATGCATGTCATTCTGTACTAT 59.403 38.462 28.07 0.00 44.36 2.12
3463 3699 6.597672 TGTACTATGGTATTTGTTGCTTGGAG 59.402 38.462 0.00 0.00 0.00 3.86
3573 3810 3.503748 GTCTTTGATGGGTTTGACTCCAG 59.496 47.826 0.00 0.00 36.38 3.86
3629 3866 3.188880 TGATTTGGGCTGGGATTTCTT 57.811 42.857 0.00 0.00 0.00 2.52
3759 4001 7.775120 ACATAGCCAGAAGTAAAATGATTTGG 58.225 34.615 0.00 0.00 0.00 3.28
3764 4006 6.400568 CCAGAAGTAAAATGATTTGGTGCAT 58.599 36.000 0.00 0.00 0.00 3.96
3785 4027 3.704512 TGCATACTTGTGTTTGTTGCAG 58.295 40.909 0.00 0.00 0.00 4.41
3822 4064 3.760580 ATATAGCCAGAAGTGACCTGC 57.239 47.619 0.00 0.00 0.00 4.85
3843 4085 8.451748 ACCTGCGATTTATCTTTTCTTTAGTTC 58.548 33.333 0.00 0.00 0.00 3.01
3896 4138 7.275183 TGCTTCTAATGTGATATTACTGCACT 58.725 34.615 0.00 0.00 33.83 4.40
3914 4156 8.487313 ACTGCACTGTAATCGATTTATGTTTA 57.513 30.769 17.19 0.00 0.00 2.01
3924 4166 3.945285 CGATTTATGTTTACAGGTGGGCT 59.055 43.478 0.00 0.00 0.00 5.19
4015 4257 6.079336 TCCATGATAAAAGGGGAGTACGATA 58.921 40.000 0.00 0.00 0.00 2.92
4273 4515 3.640967 TGCAGCCTTTTCATTTACTGGTT 59.359 39.130 0.00 0.00 0.00 3.67
4295 4537 7.230510 TGGTTCAGTTTTATATTTGTCAGCAGT 59.769 33.333 0.00 0.00 0.00 4.40
4328 4570 6.015434 AGGTTTGTTTACATTTCAGGATGTCC 60.015 38.462 0.00 0.00 40.54 4.02
4400 4642 6.987404 ACACCAGACTAAAAAGAGAGAAAGAC 59.013 38.462 0.00 0.00 0.00 3.01
4440 4682 7.041098 CCTCTGTTGTTGTATTGTAAGCTTTCT 60.041 37.037 3.20 0.00 0.00 2.52
4441 4683 7.639039 TCTGTTGTTGTATTGTAAGCTTTCTG 58.361 34.615 3.20 0.00 0.00 3.02
4442 4684 6.734137 TGTTGTTGTATTGTAAGCTTTCTGG 58.266 36.000 3.20 0.00 0.00 3.86
4447 4689 6.985188 TGTATTGTAAGCTTTCTGGCTAAG 57.015 37.500 3.20 0.00 42.24 2.18
4450 4692 4.617253 TGTAAGCTTTCTGGCTAAGTCA 57.383 40.909 3.20 0.00 42.24 3.41
4467 4709 7.415653 GGCTAAGTCAATGTTCCTTTCCTATTG 60.416 40.741 0.00 0.00 0.00 1.90
4470 4712 5.643777 AGTCAATGTTCCTTTCCTATTGTCG 59.356 40.000 0.00 0.00 32.22 4.35
4485 4727 8.058667 TCCTATTGTCGTGTTCTGTTTCTATA 57.941 34.615 0.00 0.00 0.00 1.31
4492 4734 8.255206 TGTCGTGTTCTGTTTCTATATTATGGT 58.745 33.333 0.00 0.00 0.00 3.55
4543 4790 5.687285 GGAATTGGTTTATTGATCGATGTGC 59.313 40.000 0.54 0.00 0.00 4.57
4560 4812 2.119457 GTGCTCGCAAAAAGGAAGTTG 58.881 47.619 0.00 0.00 0.00 3.16
4564 4816 3.304659 GCTCGCAAAAAGGAAGTTGATCA 60.305 43.478 0.00 0.00 0.00 2.92
4589 4841 2.703416 CTGCTGTGACCATGCTTTCTA 58.297 47.619 0.00 0.00 0.00 2.10
4590 4842 3.276857 CTGCTGTGACCATGCTTTCTAT 58.723 45.455 0.00 0.00 0.00 1.98
4591 4843 3.689347 TGCTGTGACCATGCTTTCTATT 58.311 40.909 0.00 0.00 0.00 1.73
4604 4890 4.020218 TGCTTTCTATTAGCAGTCCAGTGT 60.020 41.667 0.00 0.00 43.30 3.55
4621 4907 6.929606 GTCCAGTGTTAGTTCTACTTGAATGT 59.070 38.462 0.00 0.00 36.99 2.71
4627 4913 6.212791 TGTTAGTTCTACTTGAATGTAGGGCT 59.787 38.462 0.00 0.00 40.05 5.19
4628 4914 5.091261 AGTTCTACTTGAATGTAGGGCTG 57.909 43.478 0.00 0.00 40.05 4.85
4632 4918 0.737219 CTTGAATGTAGGGCTGCAGC 59.263 55.000 30.88 30.88 41.14 5.25
4678 4964 6.989169 ACATATTCCACAGAATAGAAGCACTC 59.011 38.462 2.36 0.00 45.77 3.51
4679 4965 3.895232 TCCACAGAATAGAAGCACTCC 57.105 47.619 0.00 0.00 0.00 3.85
4680 4966 2.501723 TCCACAGAATAGAAGCACTCCC 59.498 50.000 0.00 0.00 0.00 4.30
4690 4976 4.379302 AGAAGCACTCCCAGAAGAAAAT 57.621 40.909 0.00 0.00 0.00 1.82
4697 4983 2.813754 CTCCCAGAAGAAAATGTTCGCA 59.186 45.455 0.00 0.00 38.90 5.10
4785 5075 4.571176 GTCCCTTTGTAGGAATCATTCGAC 59.429 45.833 0.00 0.00 45.05 4.20
4798 5088 9.480861 AGGAATCATTCGACATCCTTATAGATA 57.519 33.333 0.00 0.00 37.48 1.98
4908 5199 3.728845 TGTTCTACTTTGGTCTGACAGC 58.271 45.455 10.38 0.00 0.00 4.40
4909 5200 2.724977 TCTACTTTGGTCTGACAGCG 57.275 50.000 10.38 0.00 0.00 5.18
4914 5206 2.097466 ACTTTGGTCTGACAGCGTTTTG 59.903 45.455 10.38 0.00 0.00 2.44
4918 5210 1.940613 GGTCTGACAGCGTTTTGACTT 59.059 47.619 10.38 0.00 0.00 3.01
4977 5269 2.003301 GGACTGCCGATCTCAAAAGTC 58.997 52.381 0.00 0.00 34.62 3.01
5065 5357 1.141657 TCATATGCCTGAAGTCCCAGC 59.858 52.381 0.00 0.00 32.97 4.85
5166 5458 3.003173 TCCCCTGGCTCGAAGGTG 61.003 66.667 1.10 0.00 32.45 4.00
5217 5509 2.042639 GCCCATGCCCATTCCACT 60.043 61.111 0.00 0.00 0.00 4.00
5232 5524 1.621317 TCCACTGCTGAATCGTTGGTA 59.379 47.619 0.00 0.00 0.00 3.25
5233 5525 2.002586 CCACTGCTGAATCGTTGGTAG 58.997 52.381 0.00 0.00 0.00 3.18
5234 5526 2.353704 CCACTGCTGAATCGTTGGTAGA 60.354 50.000 0.00 0.00 0.00 2.59
5296 5588 1.472728 CCAGGGTTGCAGATACGGTAC 60.473 57.143 0.00 0.00 0.00 3.34
5314 5609 4.585879 GGTACTATCTGGTTTTGAGCCAA 58.414 43.478 0.00 0.00 35.32 4.52
5328 5623 2.269241 CCAAGGGGAAGACGAGGC 59.731 66.667 0.00 0.00 35.59 4.70
5406 5701 2.993899 CGACAAGAACTGACCATACCAC 59.006 50.000 0.00 0.00 0.00 4.16
5432 5727 2.743928 AGCGGCTTCCTTGCTTCG 60.744 61.111 0.00 0.00 34.80 3.79
5498 5793 1.093159 CATCTTGCCCAGAACAGCTC 58.907 55.000 0.00 0.00 34.16 4.09
5517 5812 1.066573 TCTACTTGCAAGAGCTCCTGC 60.067 52.381 32.50 27.09 42.74 4.85
5590 5885 1.755380 AGGTAGGACCAGATTACGCAC 59.245 52.381 0.00 0.00 41.95 5.34
5630 6062 6.168270 AGTTGGCTCATTTCCTCTATAGAC 57.832 41.667 0.00 0.00 0.00 2.59
5632 6064 3.005897 TGGCTCATTTCCTCTATAGACGC 59.994 47.826 0.00 0.00 0.00 5.19
5640 6072 4.540359 TCCTCTATAGACGCTAGGAGTC 57.460 50.000 0.00 0.00 38.81 3.36
5641 6073 3.902467 TCCTCTATAGACGCTAGGAGTCA 59.098 47.826 0.00 0.00 40.84 3.41
5694 6126 0.472044 TGCTGGAGTGCTGGTGTTTA 59.528 50.000 0.00 0.00 0.00 2.01
5696 6128 1.537202 GCTGGAGTGCTGGTGTTTAAG 59.463 52.381 0.00 0.00 0.00 1.85
5782 6214 1.456296 TTGCAATGCACCTAGCTCAG 58.544 50.000 7.72 0.00 45.94 3.35
5791 6223 3.769300 TGCACCTAGCTCAGATTCTTGTA 59.231 43.478 0.00 0.00 45.94 2.41
5796 6228 7.470702 GCACCTAGCTCAGATTCTTGTATTCTA 60.471 40.741 0.00 0.00 41.15 2.10
5797 6229 7.865385 CACCTAGCTCAGATTCTTGTATTCTAC 59.135 40.741 0.00 0.00 0.00 2.59
5798 6230 7.782644 ACCTAGCTCAGATTCTTGTATTCTACT 59.217 37.037 0.00 0.00 0.00 2.57
5799 6231 8.296713 CCTAGCTCAGATTCTTGTATTCTACTC 58.703 40.741 0.00 0.00 0.00 2.59
5800 6232 7.049799 AGCTCAGATTCTTGTATTCTACTCC 57.950 40.000 0.00 0.00 0.00 3.85
5801 6233 6.041523 AGCTCAGATTCTTGTATTCTACTCCC 59.958 42.308 0.00 0.00 0.00 4.30
5802 6234 6.041523 GCTCAGATTCTTGTATTCTACTCCCT 59.958 42.308 0.00 0.00 0.00 4.20
5803 6235 7.589958 TCAGATTCTTGTATTCTACTCCCTC 57.410 40.000 0.00 0.00 0.00 4.30
5804 6236 6.551601 TCAGATTCTTGTATTCTACTCCCTCC 59.448 42.308 0.00 0.00 0.00 4.30
5805 6237 5.536916 AGATTCTTGTATTCTACTCCCTCCG 59.463 44.000 0.00 0.00 0.00 4.63
5806 6238 4.246712 TCTTGTATTCTACTCCCTCCGT 57.753 45.455 0.00 0.00 0.00 4.69
5807 6239 4.607239 TCTTGTATTCTACTCCCTCCGTT 58.393 43.478 0.00 0.00 0.00 4.44
5808 6240 4.643784 TCTTGTATTCTACTCCCTCCGTTC 59.356 45.833 0.00 0.00 0.00 3.95
5809 6241 3.294214 TGTATTCTACTCCCTCCGTTCC 58.706 50.000 0.00 0.00 0.00 3.62
5810 6242 1.400737 ATTCTACTCCCTCCGTTCCG 58.599 55.000 0.00 0.00 0.00 4.30
5811 6243 0.329261 TTCTACTCCCTCCGTTCCGA 59.671 55.000 0.00 0.00 0.00 4.55
5812 6244 0.329261 TCTACTCCCTCCGTTCCGAA 59.671 55.000 0.00 0.00 0.00 4.30
5813 6245 1.064166 TCTACTCCCTCCGTTCCGAAT 60.064 52.381 0.00 0.00 0.00 3.34
5814 6246 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
5815 6247 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
5816 6248 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
5817 6249 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
5818 6250 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
5819 6251 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
5820 6252 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
5821 6253 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
5822 6254 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
5823 6255 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
5824 6256 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
5825 6257 2.471749 CGTTCCGAATTACTTGTCGCAC 60.472 50.000 0.00 0.00 35.93 5.34
5826 6258 1.342555 TCCGAATTACTTGTCGCACG 58.657 50.000 0.00 0.00 35.93 5.34
5827 6259 1.065358 CCGAATTACTTGTCGCACGT 58.935 50.000 0.00 0.00 35.93 4.49
5828 6260 2.095314 TCCGAATTACTTGTCGCACGTA 60.095 45.455 0.00 0.00 35.93 3.57
5829 6261 2.855963 CCGAATTACTTGTCGCACGTAT 59.144 45.455 0.00 0.00 35.93 3.06
5830 6262 3.301579 CCGAATTACTTGTCGCACGTATG 60.302 47.826 0.00 0.00 35.93 2.39
5831 6263 3.301579 CGAATTACTTGTCGCACGTATGG 60.302 47.826 0.00 0.00 0.00 2.74
5832 6264 3.513680 ATTACTTGTCGCACGTATGGA 57.486 42.857 0.00 0.00 0.00 3.41
5833 6265 3.513680 TTACTTGTCGCACGTATGGAT 57.486 42.857 0.00 0.00 0.00 3.41
5834 6266 1.640428 ACTTGTCGCACGTATGGATG 58.360 50.000 0.00 0.00 0.00 3.51
5835 6267 1.067142 ACTTGTCGCACGTATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
5836 6268 2.164827 ACTTGTCGCACGTATGGATGTA 59.835 45.455 0.00 0.00 0.00 2.29
5837 6269 3.181479 ACTTGTCGCACGTATGGATGTAT 60.181 43.478 0.00 0.00 0.00 2.29
5838 6270 3.007979 TGTCGCACGTATGGATGTATC 57.992 47.619 0.00 0.00 0.00 2.24
5839 6271 2.621526 TGTCGCACGTATGGATGTATCT 59.378 45.455 0.00 0.00 0.00 1.98
5840 6272 3.816523 TGTCGCACGTATGGATGTATCTA 59.183 43.478 0.00 0.00 0.00 1.98
5841 6273 4.083484 TGTCGCACGTATGGATGTATCTAG 60.083 45.833 0.00 0.00 0.00 2.43
5842 6274 4.153655 GTCGCACGTATGGATGTATCTAGA 59.846 45.833 0.00 0.00 0.00 2.43
5843 6275 4.941873 TCGCACGTATGGATGTATCTAGAT 59.058 41.667 10.73 10.73 0.00 1.98
5844 6276 5.030936 CGCACGTATGGATGTATCTAGATG 58.969 45.833 15.79 0.00 0.00 2.90
5845 6277 5.392057 CGCACGTATGGATGTATCTAGATGT 60.392 44.000 15.79 1.25 30.36 3.06
5846 6278 6.183360 CGCACGTATGGATGTATCTAGATGTA 60.183 42.308 15.79 4.44 29.44 2.29
5847 6279 7.467403 CGCACGTATGGATGTATCTAGATGTAT 60.467 40.741 15.79 9.11 29.44 2.29
5848 6280 8.191446 GCACGTATGGATGTATCTAGATGTATT 58.809 37.037 15.79 0.00 29.44 1.89
5874 6306 9.547753 TTTAGTTCTAGATACATCCATTTCAGC 57.452 33.333 0.00 0.00 0.00 4.26
5875 6307 6.219473 AGTTCTAGATACATCCATTTCAGCG 58.781 40.000 0.00 0.00 0.00 5.18
5876 6308 6.040955 AGTTCTAGATACATCCATTTCAGCGA 59.959 38.462 0.00 0.00 0.00 4.93
5877 6309 5.773575 TCTAGATACATCCATTTCAGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
5878 6310 3.384668 AGATACATCCATTTCAGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
5879 6311 2.951457 TACATCCATTTCAGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
5880 6312 1.645034 ACATCCATTTCAGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
5881 6313 1.066858 ACATCCATTTCAGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
5882 6314 2.165641 ACATCCATTTCAGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
5883 6315 3.186909 CATCCATTTCAGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
5884 6316 3.520290 TCCATTTCAGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
5885 6317 3.857052 TCCATTTCAGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
5886 6318 4.250464 TCCATTTCAGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
5887 6319 5.412640 TCCATTTCAGCGACGAGTAATTTA 58.587 37.500 0.00 0.00 0.00 1.40
5888 6320 5.518847 TCCATTTCAGCGACGAGTAATTTAG 59.481 40.000 0.00 0.00 0.00 1.85
5889 6321 5.518847 CCATTTCAGCGACGAGTAATTTAGA 59.481 40.000 0.00 0.00 0.00 2.10
5890 6322 6.035650 CCATTTCAGCGACGAGTAATTTAGAA 59.964 38.462 0.00 0.00 0.00 2.10
5891 6323 6.385537 TTTCAGCGACGAGTAATTTAGAAC 57.614 37.500 0.00 0.00 0.00 3.01
5892 6324 4.093514 TCAGCGACGAGTAATTTAGAACG 58.906 43.478 0.00 0.00 0.00 3.95
5893 6325 3.239941 CAGCGACGAGTAATTTAGAACGG 59.760 47.826 0.00 0.00 0.00 4.44
5894 6326 3.127548 AGCGACGAGTAATTTAGAACGGA 59.872 43.478 0.00 0.00 0.00 4.69
5895 6327 3.481388 GCGACGAGTAATTTAGAACGGAG 59.519 47.826 0.00 0.00 0.00 4.63
5896 6328 4.033684 CGACGAGTAATTTAGAACGGAGG 58.966 47.826 0.00 0.00 0.00 4.30
5897 6329 4.357996 GACGAGTAATTTAGAACGGAGGG 58.642 47.826 0.00 0.00 0.00 4.30
5898 6330 4.019174 ACGAGTAATTTAGAACGGAGGGA 58.981 43.478 0.00 0.00 0.00 4.20
5899 6331 4.097589 ACGAGTAATTTAGAACGGAGGGAG 59.902 45.833 0.00 0.00 0.00 4.30
5900 6332 4.097589 CGAGTAATTTAGAACGGAGGGAGT 59.902 45.833 0.00 0.00 0.00 3.85
5901 6333 5.297776 CGAGTAATTTAGAACGGAGGGAGTA 59.702 44.000 0.00 0.00 0.00 2.59
5902 6334 6.016443 CGAGTAATTTAGAACGGAGGGAGTAT 60.016 42.308 0.00 0.00 0.00 2.12
5903 6335 7.469732 CGAGTAATTTAGAACGGAGGGAGTATT 60.470 40.741 0.00 0.00 0.00 1.89
5904 6336 8.773033 AGTAATTTAGAACGGAGGGAGTATTA 57.227 34.615 0.00 0.00 0.00 0.98
5905 6337 8.858094 AGTAATTTAGAACGGAGGGAGTATTAG 58.142 37.037 0.00 0.00 0.00 1.73
5906 6338 7.672122 AATTTAGAACGGAGGGAGTATTAGT 57.328 36.000 0.00 0.00 0.00 2.24
5907 6339 6.461110 TTTAGAACGGAGGGAGTATTAGTG 57.539 41.667 0.00 0.00 0.00 2.74
5908 6340 3.978610 AGAACGGAGGGAGTATTAGTGT 58.021 45.455 0.00 0.00 0.00 3.55
5909 6341 5.121380 AGAACGGAGGGAGTATTAGTGTA 57.879 43.478 0.00 0.00 0.00 2.90
5910 6342 5.703310 AGAACGGAGGGAGTATTAGTGTAT 58.297 41.667 0.00 0.00 0.00 2.29
5911 6343 6.134754 AGAACGGAGGGAGTATTAGTGTATT 58.865 40.000 0.00 0.00 0.00 1.89
5912 6344 7.293073 AGAACGGAGGGAGTATTAGTGTATTA 58.707 38.462 0.00 0.00 0.00 0.98
5913 6345 6.890979 ACGGAGGGAGTATTAGTGTATTAC 57.109 41.667 0.00 0.00 0.00 1.89
5914 6346 6.367983 ACGGAGGGAGTATTAGTGTATTACA 58.632 40.000 0.00 0.00 0.00 2.41
5915 6347 7.008941 ACGGAGGGAGTATTAGTGTATTACAT 58.991 38.462 0.00 0.00 0.00 2.29
5916 6348 7.039923 ACGGAGGGAGTATTAGTGTATTACATG 60.040 40.741 0.00 0.00 0.00 3.21
5917 6349 7.039923 CGGAGGGAGTATTAGTGTATTACATGT 60.040 40.741 2.69 2.69 0.00 3.21
5918 6350 8.088981 GGAGGGAGTATTAGTGTATTACATGTG 58.911 40.741 9.11 0.00 0.00 3.21
5919 6351 7.442656 AGGGAGTATTAGTGTATTACATGTGC 58.557 38.462 9.11 0.00 0.00 4.57
5920 6352 7.070696 AGGGAGTATTAGTGTATTACATGTGCA 59.929 37.037 9.11 0.00 0.00 4.57
5921 6353 7.878127 GGGAGTATTAGTGTATTACATGTGCAT 59.122 37.037 9.11 3.01 0.00 3.96
5922 6354 8.712363 GGAGTATTAGTGTATTACATGTGCATG 58.288 37.037 9.11 10.31 44.15 4.06
5923 6355 9.476202 GAGTATTAGTGTATTACATGTGCATGA 57.524 33.333 17.85 0.00 41.20 3.07
5924 6356 9.830975 AGTATTAGTGTATTACATGTGCATGAA 57.169 29.630 17.85 8.74 41.20 2.57
5926 6358 8.737168 ATTAGTGTATTACATGTGCATGAAGT 57.263 30.769 17.85 6.27 41.20 3.01
5927 6359 6.426980 AGTGTATTACATGTGCATGAAGTG 57.573 37.500 17.85 0.00 41.20 3.16
5928 6360 6.172630 AGTGTATTACATGTGCATGAAGTGA 58.827 36.000 17.85 1.04 41.20 3.41
5929 6361 6.314648 AGTGTATTACATGTGCATGAAGTGAG 59.685 38.462 17.85 0.00 41.20 3.51
5930 6362 6.313658 GTGTATTACATGTGCATGAAGTGAGA 59.686 38.462 17.85 0.00 41.20 3.27
5931 6363 6.878389 TGTATTACATGTGCATGAAGTGAGAA 59.122 34.615 17.85 0.00 41.20 2.87
5932 6364 7.553760 TGTATTACATGTGCATGAAGTGAGAAT 59.446 33.333 17.85 0.00 41.20 2.40
5933 6365 4.696899 ACATGTGCATGAAGTGAGAATG 57.303 40.909 17.85 0.00 41.20 2.67
5934 6366 4.329392 ACATGTGCATGAAGTGAGAATGA 58.671 39.130 17.85 0.00 41.20 2.57
5935 6367 4.948004 ACATGTGCATGAAGTGAGAATGAT 59.052 37.500 17.85 0.00 41.20 2.45
5936 6368 4.957759 TGTGCATGAAGTGAGAATGATG 57.042 40.909 0.00 0.00 0.00 3.07
5937 6369 3.692593 TGTGCATGAAGTGAGAATGATGG 59.307 43.478 0.00 0.00 0.00 3.51
5938 6370 3.943381 GTGCATGAAGTGAGAATGATGGA 59.057 43.478 0.00 0.00 0.00 3.41
5939 6371 4.035324 GTGCATGAAGTGAGAATGATGGAG 59.965 45.833 0.00 0.00 0.00 3.86
5940 6372 4.197750 GCATGAAGTGAGAATGATGGAGT 58.802 43.478 0.00 0.00 0.00 3.85
5941 6373 5.104817 TGCATGAAGTGAGAATGATGGAGTA 60.105 40.000 0.00 0.00 0.00 2.59
5942 6374 5.996513 GCATGAAGTGAGAATGATGGAGTAT 59.003 40.000 0.00 0.00 0.00 2.12
5943 6375 6.485984 GCATGAAGTGAGAATGATGGAGTATT 59.514 38.462 0.00 0.00 0.00 1.89
5944 6376 7.013083 GCATGAAGTGAGAATGATGGAGTATTT 59.987 37.037 0.00 0.00 0.00 1.40
5945 6377 9.551734 CATGAAGTGAGAATGATGGAGTATTTA 57.448 33.333 0.00 0.00 0.00 1.40
5946 6378 8.948631 TGAAGTGAGAATGATGGAGTATTTAC 57.051 34.615 0.00 0.00 0.00 2.01
5947 6379 8.762645 TGAAGTGAGAATGATGGAGTATTTACT 58.237 33.333 0.00 0.00 39.71 2.24
5960 6392 8.073467 TGGAGTATTTACTACATGTCATGTCA 57.927 34.615 21.65 6.60 42.04 3.58
5961 6393 7.979537 TGGAGTATTTACTACATGTCATGTCAC 59.020 37.037 21.65 9.43 42.04 3.67
5962 6394 7.979537 GGAGTATTTACTACATGTCATGTCACA 59.020 37.037 21.65 4.30 43.67 3.58
5963 6395 9.534565 GAGTATTTACTACATGTCATGTCACAT 57.465 33.333 21.65 10.47 43.67 3.21
5967 6399 9.836864 ATTTACTACATGTCATGTCACATATGT 57.163 29.630 21.65 1.41 43.67 2.29
5968 6400 8.647143 TTACTACATGTCATGTCACATATGTG 57.353 34.615 26.83 26.83 43.67 3.21
5989 6421 7.169158 TGTGAGTTTAAAATGATGAATCCCC 57.831 36.000 0.00 0.00 0.00 4.81
5990 6422 6.953520 TGTGAGTTTAAAATGATGAATCCCCT 59.046 34.615 0.00 0.00 0.00 4.79
5991 6423 8.112822 TGTGAGTTTAAAATGATGAATCCCCTA 58.887 33.333 0.00 0.00 0.00 3.53
5992 6424 8.966868 GTGAGTTTAAAATGATGAATCCCCTAA 58.033 33.333 0.00 0.00 0.00 2.69
5993 6425 9.540538 TGAGTTTAAAATGATGAATCCCCTAAA 57.459 29.630 0.00 0.00 0.00 1.85
5998 6430 7.813087 AAAATGATGAATCCCCTAAAAAGGT 57.187 32.000 0.00 0.00 0.00 3.50
5999 6431 8.909423 AAAATGATGAATCCCCTAAAAAGGTA 57.091 30.769 0.00 0.00 0.00 3.08
6000 6432 8.909423 AAATGATGAATCCCCTAAAAAGGTAA 57.091 30.769 0.00 0.00 0.00 2.85
6001 6433 8.909423 AATGATGAATCCCCTAAAAAGGTAAA 57.091 30.769 0.00 0.00 0.00 2.01
6002 6434 8.909423 ATGATGAATCCCCTAAAAAGGTAAAA 57.091 30.769 0.00 0.00 0.00 1.52
6003 6435 8.728596 TGATGAATCCCCTAAAAAGGTAAAAA 57.271 30.769 0.00 0.00 0.00 1.94
6034 6466 9.495382 AGTTAAAGAGGTTGAAGATATAGGTCT 57.505 33.333 0.00 0.00 0.00 3.85
6041 6473 9.549078 GAGGTTGAAGATATAGGTCTTTTTAGG 57.451 37.037 0.00 0.00 38.51 2.69
6042 6474 8.495260 AGGTTGAAGATATAGGTCTTTTTAGGG 58.505 37.037 0.00 0.00 38.51 3.53
6043 6475 7.720074 GGTTGAAGATATAGGTCTTTTTAGGGG 59.280 40.741 0.00 0.00 38.51 4.79
6044 6476 6.838382 TGAAGATATAGGTCTTTTTAGGGGC 58.162 40.000 0.00 0.00 38.51 5.80
6045 6477 6.388689 TGAAGATATAGGTCTTTTTAGGGGCA 59.611 38.462 0.00 0.00 38.51 5.36
6046 6478 6.841781 AGATATAGGTCTTTTTAGGGGCAA 57.158 37.500 0.00 0.00 0.00 4.52
6047 6479 7.408013 AGATATAGGTCTTTTTAGGGGCAAT 57.592 36.000 0.00 0.00 0.00 3.56
6048 6480 7.234355 AGATATAGGTCTTTTTAGGGGCAATG 58.766 38.462 0.00 0.00 0.00 2.82
6049 6481 3.825908 AGGTCTTTTTAGGGGCAATGA 57.174 42.857 0.00 0.00 0.00 2.57
6050 6482 4.126520 AGGTCTTTTTAGGGGCAATGAA 57.873 40.909 0.00 0.00 0.00 2.57
6051 6483 4.089361 AGGTCTTTTTAGGGGCAATGAAG 58.911 43.478 0.00 0.00 0.00 3.02
6052 6484 3.195610 GGTCTTTTTAGGGGCAATGAAGG 59.804 47.826 0.00 0.00 0.00 3.46
6053 6485 3.832490 GTCTTTTTAGGGGCAATGAAGGT 59.168 43.478 0.00 0.00 0.00 3.50
6054 6486 4.283467 GTCTTTTTAGGGGCAATGAAGGTT 59.717 41.667 0.00 0.00 0.00 3.50
6055 6487 5.479027 GTCTTTTTAGGGGCAATGAAGGTTA 59.521 40.000 0.00 0.00 0.00 2.85
6056 6488 5.714806 TCTTTTTAGGGGCAATGAAGGTTAG 59.285 40.000 0.00 0.00 0.00 2.34
6057 6489 3.662759 TTAGGGGCAATGAAGGTTAGG 57.337 47.619 0.00 0.00 0.00 2.69
6058 6490 0.631212 AGGGGCAATGAAGGTTAGGG 59.369 55.000 0.00 0.00 0.00 3.53
6059 6491 0.397114 GGGGCAATGAAGGTTAGGGG 60.397 60.000 0.00 0.00 0.00 4.79
6060 6492 0.629058 GGGCAATGAAGGTTAGGGGA 59.371 55.000 0.00 0.00 0.00 4.81
6061 6493 1.410224 GGGCAATGAAGGTTAGGGGAG 60.410 57.143 0.00 0.00 0.00 4.30
6062 6494 1.393603 GCAATGAAGGTTAGGGGAGC 58.606 55.000 0.00 0.00 0.00 4.70
6063 6495 1.668419 CAATGAAGGTTAGGGGAGCG 58.332 55.000 0.00 0.00 0.00 5.03
6064 6496 1.065418 CAATGAAGGTTAGGGGAGCGT 60.065 52.381 0.00 0.00 0.00 5.07
6065 6497 0.541863 ATGAAGGTTAGGGGAGCGTG 59.458 55.000 0.00 0.00 0.00 5.34
6066 6498 0.834687 TGAAGGTTAGGGGAGCGTGT 60.835 55.000 0.00 0.00 0.00 4.49
6067 6499 0.391263 GAAGGTTAGGGGAGCGTGTG 60.391 60.000 0.00 0.00 0.00 3.82
6068 6500 1.125711 AAGGTTAGGGGAGCGTGTGT 61.126 55.000 0.00 0.00 0.00 3.72
6069 6501 1.079336 GGTTAGGGGAGCGTGTGTC 60.079 63.158 0.00 0.00 0.00 3.67
6070 6502 1.669440 GTTAGGGGAGCGTGTGTCA 59.331 57.895 0.00 0.00 0.00 3.58
6071 6503 0.249398 GTTAGGGGAGCGTGTGTCAT 59.751 55.000 0.00 0.00 0.00 3.06
6072 6504 0.981183 TTAGGGGAGCGTGTGTCATT 59.019 50.000 0.00 0.00 0.00 2.57
6073 6505 0.249120 TAGGGGAGCGTGTGTCATTG 59.751 55.000 0.00 0.00 0.00 2.82
6074 6506 2.690778 GGGGAGCGTGTGTCATTGC 61.691 63.158 0.00 0.00 0.00 3.56
6075 6507 2.690778 GGGAGCGTGTGTCATTGCC 61.691 63.158 0.00 0.00 0.00 4.52
6076 6508 1.965930 GGAGCGTGTGTCATTGCCA 60.966 57.895 0.00 0.00 0.00 4.92
6077 6509 1.308069 GGAGCGTGTGTCATTGCCAT 61.308 55.000 0.00 0.00 0.00 4.40
6078 6510 0.179181 GAGCGTGTGTCATTGCCATG 60.179 55.000 0.00 0.00 0.00 3.66
6079 6511 0.890542 AGCGTGTGTCATTGCCATGT 60.891 50.000 0.00 0.00 0.00 3.21
6080 6512 0.039256 GCGTGTGTCATTGCCATGTT 60.039 50.000 0.00 0.00 0.00 2.71
6081 6513 1.602668 GCGTGTGTCATTGCCATGTTT 60.603 47.619 0.00 0.00 0.00 2.83
6082 6514 2.741612 CGTGTGTCATTGCCATGTTTT 58.258 42.857 0.00 0.00 0.00 2.43
6083 6515 3.122297 CGTGTGTCATTGCCATGTTTTT 58.878 40.909 0.00 0.00 0.00 1.94
6105 6537 7.953158 TTTTGTTTTGAGAAAATGTGTGTCA 57.047 28.000 0.00 0.00 32.22 3.58
6106 6538 6.942886 TTGTTTTGAGAAAATGTGTGTCAC 57.057 33.333 0.00 0.00 32.22 3.67
6107 6539 6.266168 TGTTTTGAGAAAATGTGTGTCACT 57.734 33.333 4.27 0.00 35.11 3.41
6108 6540 6.092092 TGTTTTGAGAAAATGTGTGTCACTG 58.908 36.000 4.27 0.00 35.11 3.66
6109 6541 4.898829 TTGAGAAAATGTGTGTCACTGG 57.101 40.909 4.27 0.00 35.11 4.00
6110 6542 2.618241 TGAGAAAATGTGTGTCACTGGC 59.382 45.455 4.27 0.00 35.11 4.85
6111 6543 2.618241 GAGAAAATGTGTGTCACTGGCA 59.382 45.455 4.27 1.57 35.11 4.92
6112 6544 3.225104 AGAAAATGTGTGTCACTGGCAT 58.775 40.909 4.27 3.83 35.11 4.40
6113 6545 3.005050 AGAAAATGTGTGTCACTGGCATG 59.995 43.478 4.27 0.00 35.11 4.06
6114 6546 1.985473 AATGTGTGTCACTGGCATGT 58.015 45.000 4.27 0.00 35.11 3.21
6115 6547 1.241165 ATGTGTGTCACTGGCATGTG 58.759 50.000 4.27 9.81 39.15 3.21
6116 6548 0.818852 TGTGTGTCACTGGCATGTGG 60.819 55.000 14.28 0.00 38.40 4.17
6117 6549 1.228215 TGTGTCACTGGCATGTGGG 60.228 57.895 14.28 0.00 38.40 4.61
6118 6550 1.073025 GTGTCACTGGCATGTGGGA 59.927 57.895 14.28 0.00 38.40 4.37
6119 6551 1.073025 TGTCACTGGCATGTGGGAC 59.927 57.895 14.28 8.54 38.40 4.46
6120 6552 1.675641 GTCACTGGCATGTGGGACC 60.676 63.158 14.28 0.00 38.40 4.46
6121 6553 2.152729 TCACTGGCATGTGGGACCA 61.153 57.895 14.28 0.00 38.40 4.02
6122 6554 1.000521 CACTGGCATGTGGGACCAT 60.001 57.895 8.60 0.00 34.56 3.55
6123 6555 1.033746 CACTGGCATGTGGGACCATC 61.034 60.000 8.60 0.00 34.56 3.51
6124 6556 1.454479 CTGGCATGTGGGACCATCC 60.454 63.158 0.00 0.00 35.23 3.51
6125 6557 1.929860 CTGGCATGTGGGACCATCCT 61.930 60.000 0.00 0.00 36.57 3.24
6126 6558 1.307647 GGCATGTGGGACCATCCTT 59.692 57.895 0.00 0.00 36.57 3.36
6127 6559 1.039233 GGCATGTGGGACCATCCTTG 61.039 60.000 0.00 0.00 36.57 3.61
6128 6560 1.669999 GCATGTGGGACCATCCTTGC 61.670 60.000 0.00 0.00 36.57 4.01
6129 6561 1.077501 ATGTGGGACCATCCTTGCG 60.078 57.895 0.00 0.00 36.57 4.85
6130 6562 1.561769 ATGTGGGACCATCCTTGCGA 61.562 55.000 0.00 0.00 36.57 5.10
6131 6563 1.224592 GTGGGACCATCCTTGCGAT 59.775 57.895 0.00 0.00 36.57 4.58
6132 6564 0.394352 GTGGGACCATCCTTGCGATT 60.394 55.000 0.00 0.00 36.57 3.34
6133 6565 0.331278 TGGGACCATCCTTGCGATTT 59.669 50.000 0.00 0.00 36.57 2.17
6134 6566 1.025041 GGGACCATCCTTGCGATTTC 58.975 55.000 0.00 0.00 36.57 2.17
6135 6567 1.025041 GGACCATCCTTGCGATTTCC 58.975 55.000 0.00 0.00 32.53 3.13
6136 6568 1.408822 GGACCATCCTTGCGATTTCCT 60.409 52.381 0.00 0.00 31.49 3.36
6137 6569 2.158813 GGACCATCCTTGCGATTTCCTA 60.159 50.000 0.00 0.00 31.49 2.94
6138 6570 3.134458 GACCATCCTTGCGATTTCCTAG 58.866 50.000 0.00 0.00 0.00 3.02
6139 6571 2.505819 ACCATCCTTGCGATTTCCTAGT 59.494 45.455 0.00 0.00 0.00 2.57
6140 6572 3.054361 ACCATCCTTGCGATTTCCTAGTT 60.054 43.478 0.00 0.00 0.00 2.24
6141 6573 3.947834 CCATCCTTGCGATTTCCTAGTTT 59.052 43.478 0.00 0.00 0.00 2.66
6142 6574 4.399303 CCATCCTTGCGATTTCCTAGTTTT 59.601 41.667 0.00 0.00 0.00 2.43
6143 6575 5.105756 CCATCCTTGCGATTTCCTAGTTTTT 60.106 40.000 0.00 0.00 0.00 1.94
6253 6685 2.125912 CGGAGGCTCTGTGAACCG 60.126 66.667 15.39 4.59 34.77 4.44
6270 6703 1.054406 CCGGACATGTCTACCCCCAT 61.054 60.000 24.50 0.00 0.00 4.00
6321 6756 3.380637 GTGAGCGTCCCTATTTGACTCTA 59.619 47.826 0.00 0.00 28.48 2.43
6558 6993 2.908428 CAGCTTGCACCACAGCCA 60.908 61.111 4.49 0.00 0.00 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.246737 GCTCCCCAAAAGCACCTCAG 61.247 60.000 0.00 0.00 39.61 3.35
68 69 6.441093 TTTTGCTCTTATGCCTACAAGATG 57.559 37.500 0.00 0.00 30.70 2.90
132 138 7.306807 CGTGTTGTATTATGCTGTGGAATCTAG 60.307 40.741 0.00 0.00 0.00 2.43
133 139 6.478673 CGTGTTGTATTATGCTGTGGAATCTA 59.521 38.462 0.00 0.00 0.00 1.98
142 148 6.270815 ACTAGTACCGTGTTGTATTATGCTG 58.729 40.000 0.00 0.00 0.00 4.41
146 152 8.511604 ACTGTACTAGTACCGTGTTGTATTAT 57.488 34.615 26.41 1.67 38.04 1.28
147 153 7.921786 ACTGTACTAGTACCGTGTTGTATTA 57.078 36.000 26.41 5.96 38.04 0.98
152 158 6.253746 GTGATACTGTACTAGTACCGTGTTG 58.746 44.000 29.67 16.16 44.30 3.33
157 163 4.454678 TGGGTGATACTGTACTAGTACCG 58.545 47.826 26.41 22.84 44.30 4.02
158 164 6.973460 ATTGGGTGATACTGTACTAGTACC 57.027 41.667 26.41 13.52 44.30 3.34
159 165 7.924947 GGAAATTGGGTGATACTGTACTAGTAC 59.075 40.741 23.58 23.58 44.30 2.73
160 166 7.842743 AGGAAATTGGGTGATACTGTACTAGTA 59.157 37.037 0.00 0.00 45.50 1.82
161 167 6.672657 AGGAAATTGGGTGATACTGTACTAGT 59.327 38.462 0.00 0.00 43.56 2.57
162 168 7.125792 AGGAAATTGGGTGATACTGTACTAG 57.874 40.000 0.00 0.00 0.00 2.57
225 231 6.509656 TCAACTGTTAAAGTCTATCGTGTGT 58.490 36.000 0.00 0.00 38.56 3.72
240 246 5.106118 CGGTCTCAGAATCTCTCAACTGTTA 60.106 44.000 0.00 0.00 0.00 2.41
243 249 3.768406 CGGTCTCAGAATCTCTCAACTG 58.232 50.000 0.00 0.00 0.00 3.16
244 250 2.165437 GCGGTCTCAGAATCTCTCAACT 59.835 50.000 0.00 0.00 0.00 3.16
245 251 2.094494 TGCGGTCTCAGAATCTCTCAAC 60.094 50.000 0.00 0.00 0.00 3.18
260 266 1.197721 CTGGTGAACTTGAATGCGGTC 59.802 52.381 0.00 0.00 0.00 4.79
275 281 1.226802 CCAGACGATCGAGCTGGTG 60.227 63.158 33.48 20.26 43.25 4.17
363 369 4.598894 CGGGAGGCAGCCGATGAG 62.599 72.222 5.55 0.00 0.00 2.90
382 388 2.334653 GCCTCTGCTCGATCTCCG 59.665 66.667 0.00 0.00 40.25 4.63
383 389 2.733945 GGCCTCTGCTCGATCTCC 59.266 66.667 0.00 0.00 37.74 3.71
384 390 1.523154 ATCGGCCTCTGCTCGATCTC 61.523 60.000 0.00 0.00 42.97 2.75
385 391 1.530419 ATCGGCCTCTGCTCGATCT 60.530 57.895 0.00 0.00 42.97 2.75
386 392 3.046870 ATCGGCCTCTGCTCGATC 58.953 61.111 0.00 0.00 42.97 3.69
387 393 2.569354 GGATCGGCCTCTGCTCGAT 61.569 63.158 0.00 9.54 46.42 3.59
388 394 2.339275 TAGGATCGGCCTCTGCTCGA 62.339 60.000 0.00 0.00 46.97 4.04
389 395 1.456196 TTAGGATCGGCCTCTGCTCG 61.456 60.000 0.00 0.00 46.97 5.03
390 396 0.972883 ATTAGGATCGGCCTCTGCTC 59.027 55.000 0.00 0.00 46.97 4.26
391 397 0.972883 GATTAGGATCGGCCTCTGCT 59.027 55.000 0.00 0.28 46.97 4.24
392 398 0.036858 GGATTAGGATCGGCCTCTGC 60.037 60.000 0.00 0.00 46.97 4.26
393 399 1.638529 AGGATTAGGATCGGCCTCTG 58.361 55.000 0.00 0.00 46.97 3.35
410 416 6.458342 CGCCTTGCTTTATTTTCCTTACTAGG 60.458 42.308 0.00 0.00 43.46 3.02
411 417 6.458342 CCGCCTTGCTTTATTTTCCTTACTAG 60.458 42.308 0.00 0.00 0.00 2.57
412 418 5.355910 CCGCCTTGCTTTATTTTCCTTACTA 59.644 40.000 0.00 0.00 0.00 1.82
413 419 4.157840 CCGCCTTGCTTTATTTTCCTTACT 59.842 41.667 0.00 0.00 0.00 2.24
414 420 4.421058 CCGCCTTGCTTTATTTTCCTTAC 58.579 43.478 0.00 0.00 0.00 2.34
842 889 2.197643 GAACAGAAGCAGCAGCAGCC 62.198 60.000 6.10 0.00 45.49 4.85
868 915 1.692762 GCCTCCCTGGACCAGATTAGA 60.693 57.143 23.77 12.26 38.35 2.10
869 916 0.761802 GCCTCCCTGGACCAGATTAG 59.238 60.000 23.77 15.32 38.35 1.73
870 917 0.694444 GGCCTCCCTGGACCAGATTA 60.694 60.000 23.77 6.64 38.13 1.75
871 918 2.003548 GGCCTCCCTGGACCAGATT 61.004 63.158 23.77 0.00 38.13 2.40
872 919 2.367512 GGCCTCCCTGGACCAGAT 60.368 66.667 23.77 0.00 38.13 2.90
906 954 4.410400 CTGAGCCCAACCCGTCCC 62.410 72.222 0.00 0.00 0.00 4.46
921 969 3.972227 CGTGAGGGAAACAGGCTG 58.028 61.111 14.16 14.16 0.00 4.85
996 1048 2.003301 GAGAGATTTTTCCGCTCGCTT 58.997 47.619 0.00 0.00 33.98 4.68
1106 1175 2.171448 GGTCGTAGTGGTAGGAGTAGGA 59.829 54.545 0.00 0.00 0.00 2.94
1107 1176 2.092753 TGGTCGTAGTGGTAGGAGTAGG 60.093 54.545 0.00 0.00 0.00 3.18
1108 1177 2.941720 GTGGTCGTAGTGGTAGGAGTAG 59.058 54.545 0.00 0.00 0.00 2.57
1109 1178 2.356125 GGTGGTCGTAGTGGTAGGAGTA 60.356 54.545 0.00 0.00 0.00 2.59
1110 1179 1.615384 GGTGGTCGTAGTGGTAGGAGT 60.615 57.143 0.00 0.00 0.00 3.85
1390 1459 3.482783 GCGAAGTCCTGCAGCGTC 61.483 66.667 8.66 2.61 0.00 5.19
1549 1618 2.266055 CACTTGTCGAGGAGGGCC 59.734 66.667 0.00 0.00 0.00 5.80
1880 1949 4.459089 GGACTGGTCGCTGAGGGC 62.459 72.222 0.00 0.00 37.64 5.19
1921 1990 1.227823 CGGAATAATGCCGGCCTCA 60.228 57.895 26.77 5.45 44.87 3.86
2341 2410 2.832643 TGTCAGGTTCTATCCCCGTA 57.167 50.000 0.00 0.00 0.00 4.02
2344 2413 2.370189 CTCCATGTCAGGTTCTATCCCC 59.630 54.545 0.00 0.00 0.00 4.81
2437 2506 4.953579 GGCACCATTCCTTCTTTGGTTATA 59.046 41.667 0.00 0.00 41.77 0.98
2566 2800 7.531857 TGCATCACAAAAGGGTTATCTTAAA 57.468 32.000 0.00 0.00 0.00 1.52
2604 2838 8.260818 TCCTGAATACCAAAAGAGAGTATCAAG 58.739 37.037 0.00 0.00 37.82 3.02
2616 2850 4.229582 ACATAGGCCTCCTGAATACCAAAA 59.770 41.667 9.68 0.00 34.61 2.44
2844 3078 0.659427 CCATGTATGCCTTCACTGCG 59.341 55.000 0.00 0.00 0.00 5.18
3068 3302 6.145535 CAGAAGTTTGACAGATTGTAAAGGC 58.854 40.000 0.00 0.00 0.00 4.35
3219 3453 2.409948 AGAGGCAGTAAGTTGATGGC 57.590 50.000 7.39 7.39 39.62 4.40
3261 3495 7.885399 AGTTTGTAAATCTCTTGTCCTATTGCT 59.115 33.333 0.00 0.00 0.00 3.91
3345 3581 4.532834 TGTTCCCTTGCTAGTTCAAACTT 58.467 39.130 0.00 0.00 40.37 2.66
3356 3592 4.837860 TGTTTGGATTTATGTTCCCTTGCT 59.162 37.500 0.00 0.00 31.87 3.91
3379 3615 3.334583 ACAGACGAGCAACATATGGTT 57.665 42.857 7.80 0.00 40.59 3.67
3408 3644 9.629878 TGACATGCATATGCCATATCATATTAA 57.370 29.630 24.54 1.54 37.50 1.40
3445 3681 5.606348 AAAACTCCAAGCAACAAATACCA 57.394 34.783 0.00 0.00 0.00 3.25
3546 3782 5.640147 AGTCAAACCCATCAAAGACCATAA 58.360 37.500 0.00 0.00 0.00 1.90
3554 3790 3.138283 ACTCTGGAGTCAAACCCATCAAA 59.862 43.478 0.00 0.00 36.92 2.69
3573 3810 6.569226 GCAAGGGCATGATCACATAATAACTC 60.569 42.308 0.00 0.00 40.72 3.01
3629 3866 2.021723 GCACACACAAGGAAACAGGGA 61.022 52.381 0.00 0.00 0.00 4.20
3633 3870 4.887071 AGAAATAGCACACACAAGGAAACA 59.113 37.500 0.00 0.00 0.00 2.83
3711 3953 8.518430 TGTATTATGTCAATGTTGCCAGTATT 57.482 30.769 0.00 0.00 0.00 1.89
3716 3958 6.016360 GGCTATGTATTATGTCAATGTTGCCA 60.016 38.462 0.00 0.00 34.00 4.92
3759 4001 3.641648 ACAAACACAAGTATGCATGCAC 58.358 40.909 25.37 11.79 0.00 4.57
3764 4006 3.704512 CTGCAACAAACACAAGTATGCA 58.295 40.909 0.00 0.00 39.73 3.96
3896 4138 7.281324 CCCACCTGTAAACATAAATCGATTACA 59.719 37.037 11.83 9.09 35.73 2.41
3914 4156 0.921896 ATAAGCATCAGCCCACCTGT 59.078 50.000 0.00 0.00 43.56 4.00
3924 4166 4.102054 TCTTCCAGCAGATCATAAGCATCA 59.898 41.667 0.00 0.00 0.00 3.07
4015 4257 3.776417 ACCATTTGCCAATTGGAGCTATT 59.224 39.130 29.02 4.04 37.39 1.73
4110 4352 2.637025 CCGAACCACCAAAGCACG 59.363 61.111 0.00 0.00 0.00 5.34
4112 4354 2.909965 GGCCGAACCACCAAAGCA 60.910 61.111 0.00 0.00 38.86 3.91
4254 4496 5.140454 ACTGAACCAGTAAATGAAAAGGCT 58.860 37.500 0.00 0.00 43.46 4.58
4256 4498 9.981114 ATAAAACTGAACCAGTAAATGAAAAGG 57.019 29.630 0.00 0.00 44.62 3.11
4273 4515 8.621532 AAGACTGCTGACAAATATAAAACTGA 57.378 30.769 0.00 0.00 0.00 3.41
4291 4533 7.486802 TGTAAACAAACCTAGTAAAGACTGC 57.513 36.000 0.00 0.00 36.28 4.40
4328 4570 1.312371 CCACTAATGCCCCACCAACG 61.312 60.000 0.00 0.00 0.00 4.10
4400 4642 2.234296 AGAGGCCAGTTGGGGAAGG 61.234 63.158 5.01 0.00 37.04 3.46
4440 4682 4.079253 GGAAAGGAACATTGACTTAGCCA 58.921 43.478 0.00 0.00 0.00 4.75
4441 4683 4.336280 AGGAAAGGAACATTGACTTAGCC 58.664 43.478 0.00 0.00 0.00 3.93
4442 4684 7.121315 ACAATAGGAAAGGAACATTGACTTAGC 59.879 37.037 0.00 0.00 32.29 3.09
4447 4689 5.411669 ACGACAATAGGAAAGGAACATTGAC 59.588 40.000 0.00 0.00 32.29 3.18
4450 4692 5.313712 ACACGACAATAGGAAAGGAACATT 58.686 37.500 0.00 0.00 0.00 2.71
4467 4709 8.644318 ACCATAATATAGAAACAGAACACGAC 57.356 34.615 0.00 0.00 0.00 4.34
4517 4762 6.914215 CACATCGATCAATAAACCAATTCCAG 59.086 38.462 0.00 0.00 0.00 3.86
4543 4790 4.488126 TGATCAACTTCCTTTTTGCGAG 57.512 40.909 0.00 0.00 0.00 5.03
4546 4793 6.309737 CAGCTTATGATCAACTTCCTTTTTGC 59.690 38.462 0.00 0.00 0.00 3.68
4560 4812 2.910199 TGGTCACAGCAGCTTATGATC 58.090 47.619 9.00 9.06 0.00 2.92
4564 4816 1.064906 AGCATGGTCACAGCAGCTTAT 60.065 47.619 0.00 0.00 30.17 1.73
4589 4841 5.746990 AGAACTAACACTGGACTGCTAAT 57.253 39.130 0.00 0.00 0.00 1.73
4590 4842 5.773680 AGTAGAACTAACACTGGACTGCTAA 59.226 40.000 0.00 0.00 0.00 3.09
4591 4843 5.322754 AGTAGAACTAACACTGGACTGCTA 58.677 41.667 0.00 0.00 0.00 3.49
4598 4884 7.545965 CCTACATTCAAGTAGAACTAACACTGG 59.454 40.741 2.87 0.00 43.24 4.00
4604 4890 6.640518 CAGCCCTACATTCAAGTAGAACTAA 58.359 40.000 2.87 0.00 43.24 2.24
4642 4928 8.918202 TTCTGTGGAATATGTTTACAGTTCTT 57.082 30.769 15.23 0.00 39.66 2.52
4648 4934 9.109393 GCTTCTATTCTGTGGAATATGTTTACA 57.891 33.333 0.00 0.00 41.72 2.41
4649 4935 9.109393 TGCTTCTATTCTGTGGAATATGTTTAC 57.891 33.333 0.00 0.00 41.72 2.01
4669 4955 3.864789 TTTTCTTCTGGGAGTGCTTCT 57.135 42.857 0.00 0.00 0.00 2.85
4673 4959 3.365364 CGAACATTTTCTTCTGGGAGTGC 60.365 47.826 0.00 0.00 0.00 4.40
4678 4964 3.641437 TTGCGAACATTTTCTTCTGGG 57.359 42.857 0.00 0.00 0.00 4.45
4679 4965 5.964887 TTTTTGCGAACATTTTCTTCTGG 57.035 34.783 0.00 0.00 0.00 3.86
4739 5025 5.468072 ACTTTGCTCTGCGGAAATGATATAG 59.532 40.000 0.00 0.00 32.26 1.31
4742 5029 3.609853 ACTTTGCTCTGCGGAAATGATA 58.390 40.909 0.00 0.00 32.26 2.15
4878 5169 7.495934 TCAGACCAAAGTAGAACAAGAGAAAAG 59.504 37.037 0.00 0.00 0.00 2.27
4908 5199 1.523758 CCCTCCTGGAAGTCAAAACG 58.476 55.000 0.00 0.00 35.39 3.60
4909 5200 1.547901 CCCCCTCCTGGAAGTCAAAAC 60.548 57.143 0.00 0.00 35.39 2.43
4977 5269 2.978489 GTCGTTGAGAAAGGAGTACACG 59.022 50.000 0.00 0.00 0.00 4.49
5065 5357 1.080974 CCGCCTGCAGCTTTTTCAG 60.081 57.895 8.66 0.00 40.39 3.02
5115 5407 3.474806 GTCATGTGGACGAAGCCG 58.525 61.111 0.00 0.00 36.65 5.52
5151 5443 1.218316 GTACACCTTCGAGCCAGGG 59.782 63.158 6.59 0.00 35.46 4.45
5201 5493 2.428925 GCAGTGGAATGGGCATGGG 61.429 63.158 0.00 0.00 0.00 4.00
5202 5494 1.380785 AGCAGTGGAATGGGCATGG 60.381 57.895 0.00 0.00 0.00 3.66
5203 5495 0.681887 TCAGCAGTGGAATGGGCATG 60.682 55.000 0.00 0.00 0.00 4.06
5204 5496 0.040058 TTCAGCAGTGGAATGGGCAT 59.960 50.000 0.00 0.00 0.00 4.40
5205 5497 0.040058 ATTCAGCAGTGGAATGGGCA 59.960 50.000 0.00 0.00 33.88 5.36
5206 5498 0.743097 GATTCAGCAGTGGAATGGGC 59.257 55.000 0.00 0.00 35.23 5.36
5217 5509 3.953712 TCTTCTACCAACGATTCAGCA 57.046 42.857 0.00 0.00 0.00 4.41
5232 5524 4.589374 TCCGACTCCTTTTCTTCTTCTTCT 59.411 41.667 0.00 0.00 0.00 2.85
5233 5525 4.884247 TCCGACTCCTTTTCTTCTTCTTC 58.116 43.478 0.00 0.00 0.00 2.87
5234 5526 4.957684 TCCGACTCCTTTTCTTCTTCTT 57.042 40.909 0.00 0.00 0.00 2.52
5296 5588 3.019564 CCCTTGGCTCAAAACCAGATAG 58.980 50.000 0.00 0.00 38.73 2.08
5328 5623 1.133025 CCCCAAAACTGCTATTCTGCG 59.867 52.381 0.00 0.00 35.36 5.18
5395 5690 0.878416 GCAAAAGCGTGGTATGGTCA 59.122 50.000 0.00 0.00 0.00 4.02
5453 5748 1.027255 ATTCTCAGCAGCAGCAGCAG 61.027 55.000 12.92 3.97 45.49 4.24
5454 5749 0.608308 AATTCTCAGCAGCAGCAGCA 60.608 50.000 12.92 0.00 45.49 4.41
5455 5750 0.526662 AAATTCTCAGCAGCAGCAGC 59.473 50.000 3.17 0.46 45.49 5.25
5456 5751 2.596452 CAAAATTCTCAGCAGCAGCAG 58.404 47.619 3.17 0.00 45.49 4.24
5498 5793 1.367659 GCAGGAGCTCTTGCAAGTAG 58.632 55.000 37.42 20.33 46.60 2.57
5517 5812 1.601759 CCTGCACTGTCCAAGGTGG 60.602 63.158 0.00 0.00 39.43 4.61
5590 5885 4.158384 CCAACTATTGCTAGCAACAAACG 58.842 43.478 31.51 19.06 38.88 3.60
5630 6062 3.793801 GCAGTTCTACATGACTCCTAGCG 60.794 52.174 0.00 0.00 0.00 4.26
5632 6064 4.991153 TGCAGTTCTACATGACTCCTAG 57.009 45.455 0.00 0.00 0.00 3.02
5640 6072 6.915544 ACAGTTATCATGCAGTTCTACATG 57.084 37.500 6.67 6.67 44.05 3.21
5641 6073 6.881065 ACAACAGTTATCATGCAGTTCTACAT 59.119 34.615 0.00 0.00 0.00 2.29
5757 6189 3.321682 AGCTAGGTGCATTGCAAAGAAAA 59.678 39.130 13.94 0.00 45.94 2.29
5761 6193 1.814394 TGAGCTAGGTGCATTGCAAAG 59.186 47.619 13.94 12.04 45.94 2.77
5782 6214 5.302313 ACGGAGGGAGTAGAATACAAGAATC 59.698 44.000 0.00 0.00 46.26 2.52
5805 6237 2.471749 CGTGCGACAAGTAATTCGGAAC 60.472 50.000 0.00 0.00 37.32 3.62
5806 6238 1.722464 CGTGCGACAAGTAATTCGGAA 59.278 47.619 0.00 0.00 37.32 4.30
5807 6239 1.336148 ACGTGCGACAAGTAATTCGGA 60.336 47.619 0.00 0.00 35.73 4.55
5808 6240 1.065358 ACGTGCGACAAGTAATTCGG 58.935 50.000 0.00 0.00 35.73 4.30
5809 6241 3.301579 CCATACGTGCGACAAGTAATTCG 60.302 47.826 0.00 0.00 32.82 3.34
5810 6242 3.861113 TCCATACGTGCGACAAGTAATTC 59.139 43.478 0.00 0.00 32.82 2.17
5811 6243 3.852286 TCCATACGTGCGACAAGTAATT 58.148 40.909 0.00 0.00 32.82 1.40
5812 6244 3.513680 TCCATACGTGCGACAAGTAAT 57.486 42.857 0.00 0.00 32.82 1.89
5813 6245 3.183754 CATCCATACGTGCGACAAGTAA 58.816 45.455 0.00 0.00 32.82 2.24
5814 6246 2.164827 ACATCCATACGTGCGACAAGTA 59.835 45.455 0.00 7.72 33.49 2.24
5815 6247 1.067142 ACATCCATACGTGCGACAAGT 60.067 47.619 0.00 0.00 0.00 3.16
5816 6248 1.640428 ACATCCATACGTGCGACAAG 58.360 50.000 0.00 0.00 0.00 3.16
5817 6249 2.943449 TACATCCATACGTGCGACAA 57.057 45.000 0.00 0.00 0.00 3.18
5818 6250 2.621526 AGATACATCCATACGTGCGACA 59.378 45.455 0.00 0.00 0.00 4.35
5819 6251 3.284323 AGATACATCCATACGTGCGAC 57.716 47.619 0.00 0.00 0.00 5.19
5820 6252 4.320870 TCTAGATACATCCATACGTGCGA 58.679 43.478 0.00 0.00 0.00 5.10
5821 6253 4.680171 TCTAGATACATCCATACGTGCG 57.320 45.455 0.00 0.00 0.00 5.34
5822 6254 5.955488 ACATCTAGATACATCCATACGTGC 58.045 41.667 4.54 0.00 0.00 5.34
5848 6280 9.547753 GCTGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
5849 6281 7.867909 CGCTGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
5850 6282 7.230712 TCGCTGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
5851 6283 6.040955 TCGCTGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
5852 6284 6.144724 GTCGCTGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 0.00 3.01
5853 6285 6.216569 GTCGCTGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 0.00 2.10
5854 6286 5.562890 CGTCGCTGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 0.00 2.43
5855 6287 4.618912 CGTCGCTGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 0.00 2.43
5856 6288 4.277423 TCGTCGCTGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 0.00 1.98
5857 6289 3.068165 TCGTCGCTGAAATGGATGTATCT 59.932 43.478 0.00 0.00 0.00 1.98
5858 6290 3.381045 TCGTCGCTGAAATGGATGTATC 58.619 45.455 0.00 0.00 0.00 2.24
5859 6291 3.181475 ACTCGTCGCTGAAATGGATGTAT 60.181 43.478 0.00 0.00 0.00 2.29
5860 6292 2.165641 ACTCGTCGCTGAAATGGATGTA 59.834 45.455 0.00 0.00 0.00 2.29
5861 6293 1.066858 ACTCGTCGCTGAAATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
5862 6294 1.645034 ACTCGTCGCTGAAATGGATG 58.355 50.000 0.00 0.00 0.00 3.51
5863 6295 3.520290 TTACTCGTCGCTGAAATGGAT 57.480 42.857 0.00 0.00 0.00 3.41
5864 6296 3.520290 ATTACTCGTCGCTGAAATGGA 57.480 42.857 0.00 0.00 0.00 3.41
5865 6297 4.600012 AAATTACTCGTCGCTGAAATGG 57.400 40.909 0.00 0.00 0.00 3.16
5866 6298 6.569228 TCTAAATTACTCGTCGCTGAAATG 57.431 37.500 0.00 0.00 0.00 2.32
5867 6299 6.237490 CGTTCTAAATTACTCGTCGCTGAAAT 60.237 38.462 0.00 0.00 0.00 2.17
5868 6300 5.060077 CGTTCTAAATTACTCGTCGCTGAAA 59.940 40.000 0.00 0.00 0.00 2.69
5869 6301 4.556135 CGTTCTAAATTACTCGTCGCTGAA 59.444 41.667 0.00 0.00 0.00 3.02
5870 6302 4.093514 CGTTCTAAATTACTCGTCGCTGA 58.906 43.478 0.00 0.00 0.00 4.26
5871 6303 3.239941 CCGTTCTAAATTACTCGTCGCTG 59.760 47.826 0.00 0.00 0.00 5.18
5872 6304 3.127548 TCCGTTCTAAATTACTCGTCGCT 59.872 43.478 0.00 0.00 0.00 4.93
5873 6305 3.429085 TCCGTTCTAAATTACTCGTCGC 58.571 45.455 0.00 0.00 0.00 5.19
5874 6306 4.033684 CCTCCGTTCTAAATTACTCGTCG 58.966 47.826 0.00 0.00 0.00 5.12
5875 6307 4.096984 TCCCTCCGTTCTAAATTACTCGTC 59.903 45.833 0.00 0.00 0.00 4.20
5876 6308 4.019174 TCCCTCCGTTCTAAATTACTCGT 58.981 43.478 0.00 0.00 0.00 4.18
5877 6309 4.097589 ACTCCCTCCGTTCTAAATTACTCG 59.902 45.833 0.00 0.00 0.00 4.18
5878 6310 5.595257 ACTCCCTCCGTTCTAAATTACTC 57.405 43.478 0.00 0.00 0.00 2.59
5879 6311 7.672122 AATACTCCCTCCGTTCTAAATTACT 57.328 36.000 0.00 0.00 0.00 2.24
5880 6312 8.637099 ACTAATACTCCCTCCGTTCTAAATTAC 58.363 37.037 0.00 0.00 0.00 1.89
5881 6313 8.636213 CACTAATACTCCCTCCGTTCTAAATTA 58.364 37.037 0.00 0.00 0.00 1.40
5882 6314 7.125356 ACACTAATACTCCCTCCGTTCTAAATT 59.875 37.037 0.00 0.00 0.00 1.82
5883 6315 6.610425 ACACTAATACTCCCTCCGTTCTAAAT 59.390 38.462 0.00 0.00 0.00 1.40
5884 6316 5.954150 ACACTAATACTCCCTCCGTTCTAAA 59.046 40.000 0.00 0.00 0.00 1.85
5885 6317 5.513233 ACACTAATACTCCCTCCGTTCTAA 58.487 41.667 0.00 0.00 0.00 2.10
5886 6318 5.121380 ACACTAATACTCCCTCCGTTCTA 57.879 43.478 0.00 0.00 0.00 2.10
5887 6319 3.978610 ACACTAATACTCCCTCCGTTCT 58.021 45.455 0.00 0.00 0.00 3.01
5888 6320 6.402456 AATACACTAATACTCCCTCCGTTC 57.598 41.667 0.00 0.00 0.00 3.95
5889 6321 6.835488 TGTAATACACTAATACTCCCTCCGTT 59.165 38.462 0.00 0.00 0.00 4.44
5890 6322 6.367983 TGTAATACACTAATACTCCCTCCGT 58.632 40.000 0.00 0.00 0.00 4.69
5891 6323 6.889301 TGTAATACACTAATACTCCCTCCG 57.111 41.667 0.00 0.00 0.00 4.63
5892 6324 8.088981 CACATGTAATACACTAATACTCCCTCC 58.911 40.741 0.00 0.00 0.00 4.30
5893 6325 7.599245 GCACATGTAATACACTAATACTCCCTC 59.401 40.741 0.00 0.00 0.00 4.30
5894 6326 7.070696 TGCACATGTAATACACTAATACTCCCT 59.929 37.037 0.00 0.00 0.00 4.20
5895 6327 7.214381 TGCACATGTAATACACTAATACTCCC 58.786 38.462 0.00 0.00 0.00 4.30
5896 6328 8.712363 CATGCACATGTAATACACTAATACTCC 58.288 37.037 0.00 0.00 34.23 3.85
5897 6329 9.476202 TCATGCACATGTAATACACTAATACTC 57.524 33.333 10.27 0.00 39.72 2.59
5898 6330 9.830975 TTCATGCACATGTAATACACTAATACT 57.169 29.630 10.27 0.00 39.72 2.12
5900 6332 9.830975 ACTTCATGCACATGTAATACACTAATA 57.169 29.630 10.27 0.00 39.72 0.98
5901 6333 8.615211 CACTTCATGCACATGTAATACACTAAT 58.385 33.333 10.27 0.00 39.72 1.73
5902 6334 7.821846 TCACTTCATGCACATGTAATACACTAA 59.178 33.333 10.27 0.00 39.72 2.24
5903 6335 7.327214 TCACTTCATGCACATGTAATACACTA 58.673 34.615 10.27 0.00 39.72 2.74
5904 6336 6.172630 TCACTTCATGCACATGTAATACACT 58.827 36.000 10.27 0.00 39.72 3.55
5905 6337 6.313658 TCTCACTTCATGCACATGTAATACAC 59.686 38.462 10.27 0.00 39.72 2.90
5906 6338 6.405538 TCTCACTTCATGCACATGTAATACA 58.594 36.000 10.27 0.00 39.72 2.29
5907 6339 6.908870 TCTCACTTCATGCACATGTAATAC 57.091 37.500 10.27 0.00 39.72 1.89
5908 6340 7.769970 TCATTCTCACTTCATGCACATGTAATA 59.230 33.333 10.27 0.00 39.72 0.98
5909 6341 6.600427 TCATTCTCACTTCATGCACATGTAAT 59.400 34.615 10.27 0.00 39.72 1.89
5910 6342 5.939296 TCATTCTCACTTCATGCACATGTAA 59.061 36.000 10.27 3.64 39.72 2.41
5911 6343 5.490159 TCATTCTCACTTCATGCACATGTA 58.510 37.500 10.27 0.37 39.72 2.29
5912 6344 4.329392 TCATTCTCACTTCATGCACATGT 58.671 39.130 10.27 0.00 39.72 3.21
5913 6345 4.957759 TCATTCTCACTTCATGCACATG 57.042 40.909 4.18 4.18 40.09 3.21
5914 6346 4.338400 CCATCATTCTCACTTCATGCACAT 59.662 41.667 0.00 0.00 0.00 3.21
5915 6347 3.692593 CCATCATTCTCACTTCATGCACA 59.307 43.478 0.00 0.00 0.00 4.57
5916 6348 3.943381 TCCATCATTCTCACTTCATGCAC 59.057 43.478 0.00 0.00 0.00 4.57
5917 6349 4.196971 CTCCATCATTCTCACTTCATGCA 58.803 43.478 0.00 0.00 0.00 3.96
5918 6350 4.197750 ACTCCATCATTCTCACTTCATGC 58.802 43.478 0.00 0.00 0.00 4.06
5919 6351 8.447924 AAATACTCCATCATTCTCACTTCATG 57.552 34.615 0.00 0.00 0.00 3.07
5920 6352 9.553064 GTAAATACTCCATCATTCTCACTTCAT 57.447 33.333 0.00 0.00 0.00 2.57
5921 6353 8.762645 AGTAAATACTCCATCATTCTCACTTCA 58.237 33.333 0.00 0.00 0.00 3.02
5924 6356 9.201989 TGTAGTAAATACTCCATCATTCTCACT 57.798 33.333 0.00 0.00 37.73 3.41
5925 6357 9.988815 ATGTAGTAAATACTCCATCATTCTCAC 57.011 33.333 0.00 0.00 37.73 3.51
5926 6358 9.987272 CATGTAGTAAATACTCCATCATTCTCA 57.013 33.333 0.00 0.00 31.55 3.27
5927 6359 9.988815 ACATGTAGTAAATACTCCATCATTCTC 57.011 33.333 0.00 0.00 31.55 2.87
5928 6360 9.988815 GACATGTAGTAAATACTCCATCATTCT 57.011 33.333 0.00 0.00 31.55 2.40
5929 6361 9.764363 TGACATGTAGTAAATACTCCATCATTC 57.236 33.333 0.00 0.00 31.55 2.67
5931 6363 9.716531 CATGACATGTAGTAAATACTCCATCAT 57.283 33.333 7.31 0.00 31.55 2.45
5932 6364 8.704668 ACATGACATGTAGTAAATACTCCATCA 58.295 33.333 19.53 0.00 42.78 3.07
5933 6365 9.197694 GACATGACATGTAGTAAATACTCCATC 57.802 37.037 20.85 0.00 45.03 3.51
5934 6366 8.704668 TGACATGACATGTAGTAAATACTCCAT 58.295 33.333 20.85 0.00 45.03 3.41
5935 6367 7.979537 GTGACATGACATGTAGTAAATACTCCA 59.020 37.037 20.85 7.46 45.03 3.86
5936 6368 7.979537 TGTGACATGACATGTAGTAAATACTCC 59.020 37.037 20.85 4.99 45.03 3.85
5937 6369 8.926715 TGTGACATGACATGTAGTAAATACTC 57.073 34.615 20.85 7.68 45.03 2.59
5941 6373 9.836864 ACATATGTGACATGACATGTAGTAAAT 57.163 29.630 20.85 12.77 45.03 1.40
5963 6395 8.912988 GGGGATTCATCATTTTAAACTCACATA 58.087 33.333 0.00 0.00 0.00 2.29
5964 6396 7.620888 AGGGGATTCATCATTTTAAACTCACAT 59.379 33.333 0.00 0.00 0.00 3.21
5965 6397 6.953520 AGGGGATTCATCATTTTAAACTCACA 59.046 34.615 0.00 0.00 0.00 3.58
5966 6398 7.410120 AGGGGATTCATCATTTTAAACTCAC 57.590 36.000 0.00 0.00 0.00 3.51
5967 6399 9.540538 TTTAGGGGATTCATCATTTTAAACTCA 57.459 29.630 0.00 0.00 0.00 3.41
5972 6404 9.332713 ACCTTTTTAGGGGATTCATCATTTTAA 57.667 29.630 0.00 0.00 0.00 1.52
5973 6405 8.909423 ACCTTTTTAGGGGATTCATCATTTTA 57.091 30.769 0.00 0.00 0.00 1.52
5974 6406 7.813087 ACCTTTTTAGGGGATTCATCATTTT 57.187 32.000 0.00 0.00 0.00 1.82
5975 6407 8.909423 TTACCTTTTTAGGGGATTCATCATTT 57.091 30.769 0.00 0.00 0.00 2.32
5976 6408 8.909423 TTTACCTTTTTAGGGGATTCATCATT 57.091 30.769 0.00 0.00 0.00 2.57
5977 6409 8.909423 TTTTACCTTTTTAGGGGATTCATCAT 57.091 30.769 0.00 0.00 0.00 2.45
5978 6410 8.728596 TTTTTACCTTTTTAGGGGATTCATCA 57.271 30.769 0.00 0.00 0.00 3.07
6008 6440 9.495382 AGACCTATATCTTCAACCTCTTTAACT 57.505 33.333 0.00 0.00 0.00 2.24
6015 6447 9.549078 CCTAAAAAGACCTATATCTTCAACCTC 57.451 37.037 0.00 0.00 37.99 3.85
6016 6448 8.495260 CCCTAAAAAGACCTATATCTTCAACCT 58.505 37.037 0.00 0.00 37.99 3.50
6017 6449 7.720074 CCCCTAAAAAGACCTATATCTTCAACC 59.280 40.741 0.00 0.00 37.99 3.77
6018 6450 7.228906 GCCCCTAAAAAGACCTATATCTTCAAC 59.771 40.741 0.00 0.00 37.99 3.18
6019 6451 7.092174 TGCCCCTAAAAAGACCTATATCTTCAA 60.092 37.037 0.00 0.00 37.99 2.69
6020 6452 6.388689 TGCCCCTAAAAAGACCTATATCTTCA 59.611 38.462 0.00 0.00 37.99 3.02
6021 6453 6.838382 TGCCCCTAAAAAGACCTATATCTTC 58.162 40.000 0.00 0.00 37.99 2.87
6022 6454 6.841781 TGCCCCTAAAAAGACCTATATCTT 57.158 37.500 0.00 0.00 40.78 2.40
6023 6455 6.841781 TTGCCCCTAAAAAGACCTATATCT 57.158 37.500 0.00 0.00 0.00 1.98
6024 6456 7.231467 TCATTGCCCCTAAAAAGACCTATATC 58.769 38.462 0.00 0.00 0.00 1.63
6025 6457 7.161715 TCATTGCCCCTAAAAAGACCTATAT 57.838 36.000 0.00 0.00 0.00 0.86
6026 6458 6.584471 TCATTGCCCCTAAAAAGACCTATA 57.416 37.500 0.00 0.00 0.00 1.31
6027 6459 5.466127 TCATTGCCCCTAAAAAGACCTAT 57.534 39.130 0.00 0.00 0.00 2.57
6028 6460 4.938575 TCATTGCCCCTAAAAAGACCTA 57.061 40.909 0.00 0.00 0.00 3.08
6029 6461 3.825908 TCATTGCCCCTAAAAAGACCT 57.174 42.857 0.00 0.00 0.00 3.85
6030 6462 3.195610 CCTTCATTGCCCCTAAAAAGACC 59.804 47.826 0.00 0.00 0.00 3.85
6031 6463 3.832490 ACCTTCATTGCCCCTAAAAAGAC 59.168 43.478 0.00 0.00 0.00 3.01
6032 6464 4.126520 ACCTTCATTGCCCCTAAAAAGA 57.873 40.909 0.00 0.00 0.00 2.52
6033 6465 4.890158 AACCTTCATTGCCCCTAAAAAG 57.110 40.909 0.00 0.00 0.00 2.27
6034 6466 4.775253 CCTAACCTTCATTGCCCCTAAAAA 59.225 41.667 0.00 0.00 0.00 1.94
6035 6467 4.349365 CCTAACCTTCATTGCCCCTAAAA 58.651 43.478 0.00 0.00 0.00 1.52
6036 6468 3.309556 CCCTAACCTTCATTGCCCCTAAA 60.310 47.826 0.00 0.00 0.00 1.85
6037 6469 2.243736 CCCTAACCTTCATTGCCCCTAA 59.756 50.000 0.00 0.00 0.00 2.69
6038 6470 1.850345 CCCTAACCTTCATTGCCCCTA 59.150 52.381 0.00 0.00 0.00 3.53
6039 6471 0.631212 CCCTAACCTTCATTGCCCCT 59.369 55.000 0.00 0.00 0.00 4.79
6040 6472 0.397114 CCCCTAACCTTCATTGCCCC 60.397 60.000 0.00 0.00 0.00 5.80
6041 6473 0.629058 TCCCCTAACCTTCATTGCCC 59.371 55.000 0.00 0.00 0.00 5.36
6042 6474 2.024306 GCTCCCCTAACCTTCATTGCC 61.024 57.143 0.00 0.00 0.00 4.52
6043 6475 1.393603 GCTCCCCTAACCTTCATTGC 58.606 55.000 0.00 0.00 0.00 3.56
6044 6476 1.065418 ACGCTCCCCTAACCTTCATTG 60.065 52.381 0.00 0.00 0.00 2.82
6045 6477 1.065418 CACGCTCCCCTAACCTTCATT 60.065 52.381 0.00 0.00 0.00 2.57
6046 6478 0.541863 CACGCTCCCCTAACCTTCAT 59.458 55.000 0.00 0.00 0.00 2.57
6047 6479 0.834687 ACACGCTCCCCTAACCTTCA 60.835 55.000 0.00 0.00 0.00 3.02
6048 6480 0.391263 CACACGCTCCCCTAACCTTC 60.391 60.000 0.00 0.00 0.00 3.46
6049 6481 1.125711 ACACACGCTCCCCTAACCTT 61.126 55.000 0.00 0.00 0.00 3.50
6050 6482 1.535687 ACACACGCTCCCCTAACCT 60.536 57.895 0.00 0.00 0.00 3.50
6051 6483 1.079336 GACACACGCTCCCCTAACC 60.079 63.158 0.00 0.00 0.00 2.85
6052 6484 0.249398 ATGACACACGCTCCCCTAAC 59.751 55.000 0.00 0.00 0.00 2.34
6053 6485 0.981183 AATGACACACGCTCCCCTAA 59.019 50.000 0.00 0.00 0.00 2.69
6054 6486 0.249120 CAATGACACACGCTCCCCTA 59.751 55.000 0.00 0.00 0.00 3.53
6055 6487 1.003355 CAATGACACACGCTCCCCT 60.003 57.895 0.00 0.00 0.00 4.79
6056 6488 2.690778 GCAATGACACACGCTCCCC 61.691 63.158 0.00 0.00 0.00 4.81
6057 6489 2.690778 GGCAATGACACACGCTCCC 61.691 63.158 0.00 0.00 0.00 4.30
6058 6490 1.308069 ATGGCAATGACACACGCTCC 61.308 55.000 0.00 0.00 0.00 4.70
6059 6491 0.179181 CATGGCAATGACACACGCTC 60.179 55.000 0.00 0.00 35.67 5.03
6060 6492 0.890542 ACATGGCAATGACACACGCT 60.891 50.000 8.45 0.00 37.24 5.07
6061 6493 0.039256 AACATGGCAATGACACACGC 60.039 50.000 8.45 0.00 37.24 5.34
6062 6494 2.420628 AAACATGGCAATGACACACG 57.579 45.000 8.45 0.00 37.24 4.49
6080 6512 8.279103 GTGACACACATTTTCTCAAAACAAAAA 58.721 29.630 0.00 0.00 34.08 1.94
6081 6513 7.655328 AGTGACACACATTTTCTCAAAACAAAA 59.345 29.630 8.59 0.00 36.74 2.44
6082 6514 7.116090 CAGTGACACACATTTTCTCAAAACAAA 59.884 33.333 8.59 0.00 36.74 2.83
6083 6515 6.585702 CAGTGACACACATTTTCTCAAAACAA 59.414 34.615 8.59 0.00 36.74 2.83
6084 6516 6.092092 CAGTGACACACATTTTCTCAAAACA 58.908 36.000 8.59 0.00 36.74 2.83
6085 6517 5.516339 CCAGTGACACACATTTTCTCAAAAC 59.484 40.000 8.59 0.00 36.74 2.43
6086 6518 5.649557 CCAGTGACACACATTTTCTCAAAA 58.350 37.500 8.59 0.00 36.74 2.44
6087 6519 4.439974 GCCAGTGACACACATTTTCTCAAA 60.440 41.667 8.59 0.00 36.74 2.69
6088 6520 3.066621 GCCAGTGACACACATTTTCTCAA 59.933 43.478 8.59 0.00 36.74 3.02
6089 6521 2.618241 GCCAGTGACACACATTTTCTCA 59.382 45.455 8.59 0.00 36.74 3.27
6090 6522 2.618241 TGCCAGTGACACACATTTTCTC 59.382 45.455 8.59 0.00 36.74 2.87
6091 6523 2.653726 TGCCAGTGACACACATTTTCT 58.346 42.857 8.59 0.00 36.74 2.52
6092 6524 3.243501 ACATGCCAGTGACACACATTTTC 60.244 43.478 8.59 0.00 36.74 2.29
6093 6525 2.694628 ACATGCCAGTGACACACATTTT 59.305 40.909 8.59 0.00 36.74 1.82
6094 6526 2.034939 CACATGCCAGTGACACACATTT 59.965 45.455 8.59 0.00 42.05 2.32
6095 6527 1.610038 CACATGCCAGTGACACACATT 59.390 47.619 8.59 0.00 42.05 2.71
6096 6528 1.241165 CACATGCCAGTGACACACAT 58.759 50.000 8.59 5.71 42.05 3.21
6097 6529 0.818852 CCACATGCCAGTGACACACA 60.819 55.000 8.59 3.42 42.05 3.72
6098 6530 1.518056 CCCACATGCCAGTGACACAC 61.518 60.000 8.59 0.00 42.05 3.82
6099 6531 1.228215 CCCACATGCCAGTGACACA 60.228 57.895 8.59 0.00 42.05 3.72
6100 6532 1.073025 TCCCACATGCCAGTGACAC 59.927 57.895 7.16 0.00 42.05 3.67
6101 6533 1.073025 GTCCCACATGCCAGTGACA 59.927 57.895 7.16 0.00 42.05 3.58
6102 6534 1.675641 GGTCCCACATGCCAGTGAC 60.676 63.158 7.16 0.00 42.05 3.67
6103 6535 1.499913 ATGGTCCCACATGCCAGTGA 61.500 55.000 7.16 0.00 42.05 3.41
6104 6536 1.000521 ATGGTCCCACATGCCAGTG 60.001 57.895 0.00 0.00 39.21 3.66
6105 6537 1.304282 GATGGTCCCACATGCCAGT 59.696 57.895 0.00 0.00 35.56 4.00
6106 6538 1.454479 GGATGGTCCCACATGCCAG 60.454 63.158 0.00 0.00 35.56 4.85
6107 6539 1.508667 AAGGATGGTCCCACATGCCA 61.509 55.000 0.00 0.00 39.68 4.92
6108 6540 1.039233 CAAGGATGGTCCCACATGCC 61.039 60.000 0.00 0.00 39.68 4.40
6109 6541 1.669999 GCAAGGATGGTCCCACATGC 61.670 60.000 0.00 0.00 37.19 4.06
6110 6542 1.378882 CGCAAGGATGGTCCCACATG 61.379 60.000 0.00 0.00 37.19 3.21
6111 6543 1.077501 CGCAAGGATGGTCCCACAT 60.078 57.895 0.00 0.00 37.19 3.21
6112 6544 1.561769 ATCGCAAGGATGGTCCCACA 61.562 55.000 0.00 0.00 37.19 4.17
6113 6545 0.394352 AATCGCAAGGATGGTCCCAC 60.394 55.000 0.00 0.00 37.19 4.61
6114 6546 0.331278 AAATCGCAAGGATGGTCCCA 59.669 50.000 0.00 0.00 37.19 4.37
6115 6547 1.025041 GAAATCGCAAGGATGGTCCC 58.975 55.000 0.00 0.00 37.19 4.46
6116 6548 1.025041 GGAAATCGCAAGGATGGTCC 58.975 55.000 0.00 0.00 34.93 4.46
6117 6549 2.044123 AGGAAATCGCAAGGATGGTC 57.956 50.000 0.00 0.00 34.93 4.02
6118 6550 2.505819 ACTAGGAAATCGCAAGGATGGT 59.494 45.455 0.00 0.00 34.93 3.55
6119 6551 3.199880 ACTAGGAAATCGCAAGGATGG 57.800 47.619 0.00 0.00 34.93 3.51
6120 6552 5.567138 AAAACTAGGAAATCGCAAGGATG 57.433 39.130 0.00 0.00 34.93 3.51
6146 6578 6.757897 ACTAGGAAATCGCATCATCAAAAA 57.242 33.333 0.00 0.00 0.00 1.94
6147 6579 6.757897 AACTAGGAAATCGCATCATCAAAA 57.242 33.333 0.00 0.00 0.00 2.44
6148 6580 6.757897 AAACTAGGAAATCGCATCATCAAA 57.242 33.333 0.00 0.00 0.00 2.69
6149 6581 6.757897 AAAACTAGGAAATCGCATCATCAA 57.242 33.333 0.00 0.00 0.00 2.57
6150 6582 6.757897 AAAAACTAGGAAATCGCATCATCA 57.242 33.333 0.00 0.00 0.00 3.07
6253 6685 0.179018 GCATGGGGGTAGACATGTCC 60.179 60.000 22.21 7.90 44.74 4.02



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.