Multiple sequence alignment - TraesCS5B01G499900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G499900 chr5B 100.000 5244 0 0 1 5244 666193153 666187910 0.000000e+00 9684.0
1 TraesCS5B01G499900 chr5B 100.000 101 0 0 5522 5622 666187632 666187532 2.670000e-43 187.0
2 TraesCS5B01G499900 chr5B 93.333 75 5 0 1 75 457398665 457398739 1.660000e-20 111.0
3 TraesCS5B01G499900 chr5A 90.802 4349 262 83 652 4909 657196127 657191826 0.000000e+00 5688.0
4 TraesCS5B01G499900 chr5A 88.506 261 24 5 411 667 657196408 657196150 1.520000e-80 311.0
5 TraesCS5B01G499900 chr1D 93.603 2845 130 26 1985 4805 337213656 337216472 0.000000e+00 4198.0
6 TraesCS5B01G499900 chr1D 93.478 276 18 0 83 358 243994528 243994803 1.460000e-110 411.0
7 TraesCS5B01G499900 chr1D 90.446 157 12 3 4811 4965 337216414 337216569 2.660000e-48 204.0
8 TraesCS5B01G499900 chr1D 98.438 64 1 0 1 64 242893056 242893119 4.600000e-21 113.0
9 TraesCS5B01G499900 chr1D 96.721 61 2 0 354 414 493955929 493955989 9.960000e-18 102.0
10 TraesCS5B01G499900 chr1D 91.837 49 4 0 345 393 296619135 296619183 1.010000e-07 69.4
11 TraesCS5B01G499900 chr5D 96.293 2050 50 9 2964 5005 528966520 528964489 0.000000e+00 3341.0
12 TraesCS5B01G499900 chr5D 95.222 900 35 5 2039 2930 528967414 528966515 0.000000e+00 1417.0
13 TraesCS5B01G499900 chr5D 81.835 1068 83 51 482 1479 528969133 528968107 0.000000e+00 795.0
14 TraesCS5B01G499900 chr5D 86.418 589 49 13 1480 2041 528968079 528967495 2.880000e-172 616.0
15 TraesCS5B01G499900 chr5D 87.611 226 18 4 5006 5224 528964420 528964198 2.600000e-63 254.0
16 TraesCS5B01G499900 chr5D 81.416 113 16 3 5010 5118 528946334 528946223 2.790000e-13 87.9
17 TraesCS5B01G499900 chr1B 92.067 1727 77 13 1985 3683 452567677 452569371 0.000000e+00 2375.0
18 TraesCS5B01G499900 chr1B 89.244 1125 65 15 3746 4867 452569713 452570784 0.000000e+00 1356.0
19 TraesCS5B01G499900 chr1B 93.950 281 16 1 83 362 69665410 69665130 1.870000e-114 424.0
20 TraesCS5B01G499900 chr1B 84.615 143 17 4 4743 4882 452570721 452570861 2.730000e-28 137.0
21 TraesCS5B01G499900 chr1B 100.000 40 0 0 3712 3751 452569365 452569404 2.170000e-09 75.0
22 TraesCS5B01G499900 chr1A 90.181 662 35 13 2480 3119 435379011 435379664 0.000000e+00 835.0
23 TraesCS5B01G499900 chr1A 91.729 532 26 4 1985 2508 435378309 435378830 0.000000e+00 723.0
24 TraesCS5B01G499900 chr1A 96.774 62 2 0 355 416 300002448 300002509 2.770000e-18 104.0
25 TraesCS5B01G499900 chr1A 96.721 61 2 0 354 414 582704643 582704583 9.960000e-18 102.0
26 TraesCS5B01G499900 chr1A 93.182 44 3 0 345 388 357785594 357785637 1.310000e-06 65.8
27 TraesCS5B01G499900 chr7A 88.643 361 41 0 55 415 464911240 464910880 1.860000e-119 440.0
28 TraesCS5B01G499900 chr7A 90.523 306 27 2 56 359 120591313 120591008 2.440000e-108 403.0
29 TraesCS5B01G499900 chr4B 95.000 280 13 1 84 362 585117725 585118004 6.690000e-119 438.0
30 TraesCS5B01G499900 chr4A 96.875 256 8 0 94 349 691994923 691994668 4.020000e-116 429.0
31 TraesCS5B01G499900 chr4A 83.206 393 57 5 3624 4009 616875015 616874625 8.960000e-93 351.0
32 TraesCS5B01G499900 chr4A 91.549 71 6 0 324 394 621180204 621180274 1.290000e-16 99.0
33 TraesCS5B01G499900 chr4A 94.915 59 3 0 354 412 2627621 2627563 6.000000e-15 93.5
34 TraesCS5B01G499900 chr7B 95.420 262 12 0 88 349 607728378 607728639 8.710000e-113 418.0
35 TraesCS5B01G499900 chr7B 90.667 75 7 0 1 75 156417943 156418017 3.580000e-17 100.0
36 TraesCS5B01G499900 chr7D 94.139 273 16 0 83 355 586466235 586465963 3.130000e-112 416.0
37 TraesCS5B01G499900 chr7D 98.438 64 1 0 1 64 476900616 476900553 4.600000e-21 113.0
38 TraesCS5B01G499900 chr7D 95.238 63 3 0 354 416 210558377 210558439 3.580000e-17 100.0
39 TraesCS5B01G499900 chr7D 100.000 35 0 0 55 89 530031453 530031419 1.310000e-06 65.8
40 TraesCS5B01G499900 chr3D 93.841 276 17 0 83 358 281948416 281948691 3.130000e-112 416.0
41 TraesCS5B01G499900 chr3D 98.438 64 1 0 1 64 106163134 106163197 4.600000e-21 113.0
42 TraesCS5B01G499900 chr4D 93.478 276 18 0 83 358 262035109 262035384 1.460000e-110 411.0
43 TraesCS5B01G499900 chrUn 95.522 67 3 0 1 67 62657855 62657921 2.140000e-19 108.0
44 TraesCS5B01G499900 chr2B 91.892 74 4 2 1 73 733183197 733183269 9.960000e-18 102.0
45 TraesCS5B01G499900 chr2B 90.909 77 4 3 1 76 91066043 91066117 3.580000e-17 100.0
46 TraesCS5B01G499900 chr6A 91.667 72 6 0 341 412 47979987 47979916 3.580000e-17 100.0
47 TraesCS5B01G499900 chr6A 90.667 75 7 0 1 75 376474521 376474447 3.580000e-17 100.0
48 TraesCS5B01G499900 chr6A 88.462 78 8 1 340 417 608305946 608306022 6.000000e-15 93.5
49 TraesCS5B01G499900 chr2A 95.238 63 3 0 354 416 677416313 677416251 3.580000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G499900 chr5B 666187532 666193153 5621 True 4935.50 9684 100.0000 1 5622 2 chr5B.!!$R1 5621
1 TraesCS5B01G499900 chr5A 657191826 657196408 4582 True 2999.50 5688 89.6540 411 4909 2 chr5A.!!$R1 4498
2 TraesCS5B01G499900 chr1D 337213656 337216569 2913 False 2201.00 4198 92.0245 1985 4965 2 chr1D.!!$F5 2980
3 TraesCS5B01G499900 chr5D 528964198 528969133 4935 True 1284.60 3341 89.4758 482 5224 5 chr5D.!!$R2 4742
4 TraesCS5B01G499900 chr1B 452567677 452570861 3184 False 985.75 2375 91.4815 1985 4882 4 chr1B.!!$F1 2897
5 TraesCS5B01G499900 chr1A 435378309 435379664 1355 False 779.00 835 90.9550 1985 3119 2 chr1A.!!$F3 1134

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
193 194 0.106519 AGTCACAAGTTGGCAAGCCT 60.107 50.0 12.96 0.00 36.94 4.58 F
1418 1561 0.028770 CGTCTGATCTGCGTCTCCTC 59.971 60.0 0.00 0.00 0.00 3.71 F
1615 1790 0.730840 GATTTAGGAACCGGCGGTTG 59.269 55.0 45.21 15.05 46.95 3.77 F
2930 3511 0.178992 TTCTTGCACCCCTTCCTGTG 60.179 55.0 0.00 0.00 35.58 3.66 F
3669 4297 2.420547 GCAGATGATAGTGGTGGCTCAA 60.421 50.0 0.00 0.00 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1541 1716 0.175073 ATTTACGGGTCTGCGGAGTC 59.825 55.0 3.10 0.00 0.00 3.36 R
2908 3451 0.853530 AGGAAGGGGTGCAAGAAACT 59.146 50.0 0.00 0.00 0.00 2.66 R
3366 3979 1.117150 GGGTGCATAGTACCTTCCGA 58.883 55.0 4.33 0.00 38.30 4.55 R
4077 5020 0.176910 TGTTTCACTGTCGCAGGTGA 59.823 50.0 10.80 6.06 35.51 4.02 R
5558 6634 0.109723 TTTTGACCAAGGTCCTCCCG 59.890 55.0 16.18 0.00 43.97 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.899427 AAGTTTTAGTCCCACTACTTTTAGTC 57.101 34.615 0.00 0.00 36.31 2.59
26 27 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
27 28 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
28 29 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
29 30 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
30 31 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
44 45 3.725490 GTCATGGGACTAAACCGTATCC 58.275 50.000 0.00 0.00 40.99 2.59
45 46 3.133362 GTCATGGGACTAAACCGTATCCA 59.867 47.826 0.00 0.00 40.99 3.41
46 47 3.775866 TCATGGGACTAAACCGTATCCAA 59.224 43.478 0.00 0.00 32.45 3.53
47 48 3.899052 TGGGACTAAACCGTATCCAAG 57.101 47.619 0.00 0.00 32.45 3.61
48 49 2.093341 TGGGACTAAACCGTATCCAAGC 60.093 50.000 0.00 0.00 32.45 4.01
49 50 2.093341 GGGACTAAACCGTATCCAAGCA 60.093 50.000 0.00 0.00 32.45 3.91
50 51 2.934553 GGACTAAACCGTATCCAAGCAC 59.065 50.000 0.00 0.00 0.00 4.40
51 52 2.934553 GACTAAACCGTATCCAAGCACC 59.065 50.000 0.00 0.00 0.00 5.01
52 53 2.285977 CTAAACCGTATCCAAGCACCC 58.714 52.381 0.00 0.00 0.00 4.61
53 54 0.696501 AAACCGTATCCAAGCACCCT 59.303 50.000 0.00 0.00 0.00 4.34
54 55 0.252197 AACCGTATCCAAGCACCCTC 59.748 55.000 0.00 0.00 0.00 4.30
55 56 0.617820 ACCGTATCCAAGCACCCTCT 60.618 55.000 0.00 0.00 0.00 3.69
56 57 1.342674 ACCGTATCCAAGCACCCTCTA 60.343 52.381 0.00 0.00 0.00 2.43
57 58 1.971357 CCGTATCCAAGCACCCTCTAT 59.029 52.381 0.00 0.00 0.00 1.98
58 59 2.289072 CCGTATCCAAGCACCCTCTATG 60.289 54.545 0.00 0.00 0.00 2.23
59 60 2.365617 CGTATCCAAGCACCCTCTATGT 59.634 50.000 0.00 0.00 0.00 2.29
60 61 3.181465 CGTATCCAAGCACCCTCTATGTT 60.181 47.826 0.00 0.00 0.00 2.71
61 62 4.038763 CGTATCCAAGCACCCTCTATGTTA 59.961 45.833 0.00 0.00 0.00 2.41
62 63 3.906720 TCCAAGCACCCTCTATGTTAC 57.093 47.619 0.00 0.00 0.00 2.50
63 64 3.450904 TCCAAGCACCCTCTATGTTACT 58.549 45.455 0.00 0.00 0.00 2.24
64 65 3.844211 TCCAAGCACCCTCTATGTTACTT 59.156 43.478 0.00 0.00 0.00 2.24
65 66 4.288626 TCCAAGCACCCTCTATGTTACTTT 59.711 41.667 0.00 0.00 0.00 2.66
66 67 4.396166 CCAAGCACCCTCTATGTTACTTTG 59.604 45.833 0.00 0.00 0.00 2.77
67 68 3.610911 AGCACCCTCTATGTTACTTTGC 58.389 45.455 0.00 0.00 0.00 3.68
68 69 3.009033 AGCACCCTCTATGTTACTTTGCA 59.991 43.478 0.00 0.00 0.00 4.08
69 70 3.127030 GCACCCTCTATGTTACTTTGCAC 59.873 47.826 0.00 0.00 0.00 4.57
70 71 4.579869 CACCCTCTATGTTACTTTGCACT 58.420 43.478 0.00 0.00 0.00 4.40
71 72 5.730550 CACCCTCTATGTTACTTTGCACTA 58.269 41.667 0.00 0.00 0.00 2.74
72 73 6.349300 CACCCTCTATGTTACTTTGCACTAT 58.651 40.000 0.00 0.00 0.00 2.12
73 74 6.258727 CACCCTCTATGTTACTTTGCACTATG 59.741 42.308 0.00 0.00 0.00 2.23
74 75 6.156256 ACCCTCTATGTTACTTTGCACTATGA 59.844 38.462 0.00 0.00 0.00 2.15
75 76 7.047891 CCCTCTATGTTACTTTGCACTATGAA 58.952 38.462 0.00 0.00 0.00 2.57
76 77 7.716998 CCCTCTATGTTACTTTGCACTATGAAT 59.283 37.037 0.00 0.00 0.00 2.57
77 78 8.554528 CCTCTATGTTACTTTGCACTATGAATG 58.445 37.037 0.00 0.00 0.00 2.67
78 79 9.102757 CTCTATGTTACTTTGCACTATGAATGT 57.897 33.333 0.00 0.00 0.00 2.71
81 82 8.792830 ATGTTACTTTGCACTATGAATGTAGT 57.207 30.769 0.00 0.00 35.34 2.73
82 83 9.884636 ATGTTACTTTGCACTATGAATGTAGTA 57.115 29.630 0.00 0.00 33.29 1.82
83 84 9.713713 TGTTACTTTGCACTATGAATGTAGTAA 57.286 29.630 0.00 0.00 33.29 2.24
84 85 9.968743 GTTACTTTGCACTATGAATGTAGTAAC 57.031 33.333 0.00 0.00 33.29 2.50
85 86 9.938280 TTACTTTGCACTATGAATGTAGTAACT 57.062 29.630 0.00 0.00 33.29 2.24
86 87 8.848474 ACTTTGCACTATGAATGTAGTAACTT 57.152 30.769 0.00 0.00 33.29 2.66
87 88 9.938280 ACTTTGCACTATGAATGTAGTAACTTA 57.062 29.630 0.00 0.00 33.29 2.24
89 90 8.942338 TTGCACTATGAATGTAGTAACTTAGG 57.058 34.615 0.00 0.00 33.29 2.69
90 91 7.497595 TGCACTATGAATGTAGTAACTTAGGG 58.502 38.462 0.00 0.00 33.29 3.53
91 92 7.125204 TGCACTATGAATGTAGTAACTTAGGGT 59.875 37.037 0.00 0.00 33.29 4.34
92 93 8.636213 GCACTATGAATGTAGTAACTTAGGGTA 58.364 37.037 0.00 0.00 33.29 3.69
98 99 9.661563 TGAATGTAGTAACTTAGGGTATGTTTG 57.338 33.333 0.00 0.00 0.00 2.93
99 100 9.106070 GAATGTAGTAACTTAGGGTATGTTTGG 57.894 37.037 0.00 0.00 0.00 3.28
100 101 7.557875 TGTAGTAACTTAGGGTATGTTTGGT 57.442 36.000 0.00 0.00 0.00 3.67
101 102 7.976712 TGTAGTAACTTAGGGTATGTTTGGTT 58.023 34.615 0.00 0.00 0.00 3.67
102 103 8.096414 TGTAGTAACTTAGGGTATGTTTGGTTC 58.904 37.037 0.00 0.00 0.00 3.62
103 104 7.325725 AGTAACTTAGGGTATGTTTGGTTCT 57.674 36.000 0.00 0.00 0.00 3.01
104 105 8.439964 AGTAACTTAGGGTATGTTTGGTTCTA 57.560 34.615 0.00 0.00 0.00 2.10
105 106 8.537858 AGTAACTTAGGGTATGTTTGGTTCTAG 58.462 37.037 0.00 0.00 0.00 2.43
106 107 6.309389 ACTTAGGGTATGTTTGGTTCTAGG 57.691 41.667 0.00 0.00 0.00 3.02
107 108 3.646736 AGGGTATGTTTGGTTCTAGGC 57.353 47.619 0.00 0.00 0.00 3.93
108 109 2.241430 AGGGTATGTTTGGTTCTAGGCC 59.759 50.000 0.00 0.00 0.00 5.19
109 110 2.241430 GGGTATGTTTGGTTCTAGGCCT 59.759 50.000 11.78 11.78 0.00 5.19
110 111 3.308904 GGGTATGTTTGGTTCTAGGCCTT 60.309 47.826 12.58 0.00 0.00 4.35
111 112 3.694566 GGTATGTTTGGTTCTAGGCCTTG 59.305 47.826 12.58 9.98 0.00 3.61
112 113 1.616159 TGTTTGGTTCTAGGCCTTGC 58.384 50.000 12.58 0.00 0.00 4.01
113 114 1.133637 TGTTTGGTTCTAGGCCTTGCA 60.134 47.619 12.58 0.00 0.00 4.08
114 115 2.171003 GTTTGGTTCTAGGCCTTGCAT 58.829 47.619 12.58 0.00 0.00 3.96
115 116 2.562738 GTTTGGTTCTAGGCCTTGCATT 59.437 45.455 12.58 0.00 0.00 3.56
116 117 1.838112 TGGTTCTAGGCCTTGCATTG 58.162 50.000 12.58 0.00 0.00 2.82
117 118 0.457443 GGTTCTAGGCCTTGCATTGC 59.543 55.000 12.58 0.46 0.00 3.56
123 124 3.053828 GCCTTGCATTGCCACACT 58.946 55.556 6.12 0.00 0.00 3.55
124 125 1.368579 GCCTTGCATTGCCACACTT 59.631 52.632 6.12 0.00 0.00 3.16
125 126 0.249996 GCCTTGCATTGCCACACTTT 60.250 50.000 6.12 0.00 0.00 2.66
126 127 1.000731 GCCTTGCATTGCCACACTTTA 59.999 47.619 6.12 0.00 0.00 1.85
127 128 2.676076 CCTTGCATTGCCACACTTTAC 58.324 47.619 6.12 0.00 0.00 2.01
128 129 2.610232 CCTTGCATTGCCACACTTTACC 60.610 50.000 6.12 0.00 0.00 2.85
129 130 1.697284 TGCATTGCCACACTTTACCA 58.303 45.000 6.12 0.00 0.00 3.25
130 131 1.339610 TGCATTGCCACACTTTACCAC 59.660 47.619 6.12 0.00 0.00 4.16
131 132 1.339610 GCATTGCCACACTTTACCACA 59.660 47.619 0.00 0.00 0.00 4.17
132 133 2.862140 GCATTGCCACACTTTACCACAC 60.862 50.000 0.00 0.00 0.00 3.82
133 134 2.130272 TTGCCACACTTTACCACACA 57.870 45.000 0.00 0.00 0.00 3.72
134 135 2.356665 TGCCACACTTTACCACACAT 57.643 45.000 0.00 0.00 0.00 3.21
135 136 2.660572 TGCCACACTTTACCACACATT 58.339 42.857 0.00 0.00 0.00 2.71
136 137 3.027412 TGCCACACTTTACCACACATTT 58.973 40.909 0.00 0.00 0.00 2.32
137 138 3.449018 TGCCACACTTTACCACACATTTT 59.551 39.130 0.00 0.00 0.00 1.82
138 139 4.081420 TGCCACACTTTACCACACATTTTT 60.081 37.500 0.00 0.00 0.00 1.94
139 140 4.269844 GCCACACTTTACCACACATTTTTG 59.730 41.667 0.00 0.00 0.00 2.44
140 141 4.269844 CCACACTTTACCACACATTTTTGC 59.730 41.667 0.00 0.00 0.00 3.68
141 142 4.269844 CACACTTTACCACACATTTTTGCC 59.730 41.667 0.00 0.00 0.00 4.52
142 143 4.081420 ACACTTTACCACACATTTTTGCCA 60.081 37.500 0.00 0.00 0.00 4.92
143 144 4.872691 CACTTTACCACACATTTTTGCCAA 59.127 37.500 0.00 0.00 0.00 4.52
144 145 5.006552 CACTTTACCACACATTTTTGCCAAG 59.993 40.000 0.00 0.00 0.00 3.61
145 146 4.744795 TTACCACACATTTTTGCCAAGT 57.255 36.364 0.00 0.00 0.00 3.16
146 147 3.625649 ACCACACATTTTTGCCAAGTT 57.374 38.095 0.00 0.00 0.00 2.66
147 148 3.949132 ACCACACATTTTTGCCAAGTTT 58.051 36.364 0.00 0.00 0.00 2.66
148 149 3.688673 ACCACACATTTTTGCCAAGTTTG 59.311 39.130 0.00 0.00 0.00 2.93
149 150 3.487209 CCACACATTTTTGCCAAGTTTGC 60.487 43.478 0.00 0.00 0.00 3.68
150 151 2.682352 ACACATTTTTGCCAAGTTTGCC 59.318 40.909 0.00 0.00 0.00 4.52
151 152 2.944349 CACATTTTTGCCAAGTTTGCCT 59.056 40.909 0.00 0.00 0.00 4.75
152 153 4.125703 CACATTTTTGCCAAGTTTGCCTA 58.874 39.130 0.00 0.00 0.00 3.93
153 154 4.574013 CACATTTTTGCCAAGTTTGCCTAA 59.426 37.500 0.00 0.00 0.00 2.69
154 155 4.815846 ACATTTTTGCCAAGTTTGCCTAAG 59.184 37.500 0.00 0.00 0.00 2.18
155 156 3.467374 TTTTGCCAAGTTTGCCTAAGG 57.533 42.857 0.00 0.00 0.00 2.69
156 157 2.080654 TTGCCAAGTTTGCCTAAGGT 57.919 45.000 0.00 0.00 0.00 3.50
157 158 2.080654 TGCCAAGTTTGCCTAAGGTT 57.919 45.000 0.00 0.00 0.00 3.50
158 159 3.231207 TGCCAAGTTTGCCTAAGGTTA 57.769 42.857 0.00 0.00 0.00 2.85
159 160 3.153919 TGCCAAGTTTGCCTAAGGTTAG 58.846 45.455 0.00 0.00 0.00 2.34
160 161 3.154710 GCCAAGTTTGCCTAAGGTTAGT 58.845 45.455 0.00 0.00 0.00 2.24
161 162 3.572682 GCCAAGTTTGCCTAAGGTTAGTT 59.427 43.478 0.00 0.00 0.00 2.24
162 163 4.321008 GCCAAGTTTGCCTAAGGTTAGTTC 60.321 45.833 0.00 0.00 0.00 3.01
163 164 4.825085 CCAAGTTTGCCTAAGGTTAGTTCA 59.175 41.667 0.00 0.00 0.00 3.18
164 165 5.476945 CCAAGTTTGCCTAAGGTTAGTTCAT 59.523 40.000 0.00 0.00 0.00 2.57
165 166 6.349363 CCAAGTTTGCCTAAGGTTAGTTCATC 60.349 42.308 0.00 0.00 0.00 2.92
166 167 5.876357 AGTTTGCCTAAGGTTAGTTCATCA 58.124 37.500 0.00 0.00 0.00 3.07
167 168 6.303839 AGTTTGCCTAAGGTTAGTTCATCAA 58.696 36.000 0.00 0.00 0.00 2.57
168 169 6.775629 AGTTTGCCTAAGGTTAGTTCATCAAA 59.224 34.615 0.00 0.00 0.00 2.69
169 170 7.286775 AGTTTGCCTAAGGTTAGTTCATCAAAA 59.713 33.333 0.00 0.00 0.00 2.44
170 171 7.775053 TTGCCTAAGGTTAGTTCATCAAAAT 57.225 32.000 0.00 0.00 0.00 1.82
171 172 7.156876 TGCCTAAGGTTAGTTCATCAAAATG 57.843 36.000 0.00 0.00 0.00 2.32
172 173 6.945435 TGCCTAAGGTTAGTTCATCAAAATGA 59.055 34.615 0.00 0.00 40.18 2.57
173 174 7.121168 TGCCTAAGGTTAGTTCATCAAAATGAG 59.879 37.037 0.00 0.00 42.72 2.90
174 175 7.336931 GCCTAAGGTTAGTTCATCAAAATGAGA 59.663 37.037 0.00 0.00 42.72 3.27
175 176 8.887717 CCTAAGGTTAGTTCATCAAAATGAGAG 58.112 37.037 0.00 0.00 42.72 3.20
176 177 9.442047 CTAAGGTTAGTTCATCAAAATGAGAGT 57.558 33.333 0.00 0.00 42.72 3.24
177 178 7.913674 AGGTTAGTTCATCAAAATGAGAGTC 57.086 36.000 0.00 0.00 42.72 3.36
178 179 7.453393 AGGTTAGTTCATCAAAATGAGAGTCA 58.547 34.615 0.00 0.00 42.72 3.41
179 180 7.389053 AGGTTAGTTCATCAAAATGAGAGTCAC 59.611 37.037 0.00 0.00 42.72 3.67
180 181 7.173218 GGTTAGTTCATCAAAATGAGAGTCACA 59.827 37.037 0.00 0.00 42.72 3.58
181 182 8.559536 GTTAGTTCATCAAAATGAGAGTCACAA 58.440 33.333 0.00 0.00 42.72 3.33
182 183 7.199541 AGTTCATCAAAATGAGAGTCACAAG 57.800 36.000 0.00 0.00 42.72 3.16
183 184 6.769822 AGTTCATCAAAATGAGAGTCACAAGT 59.230 34.615 0.00 0.00 42.72 3.16
184 185 7.284034 AGTTCATCAAAATGAGAGTCACAAGTT 59.716 33.333 0.00 0.00 42.72 2.66
185 186 6.962686 TCATCAAAATGAGAGTCACAAGTTG 58.037 36.000 0.00 0.00 36.98 3.16
186 187 5.756195 TCAAAATGAGAGTCACAAGTTGG 57.244 39.130 7.96 0.00 0.00 3.77
187 188 4.036734 TCAAAATGAGAGTCACAAGTTGGC 59.963 41.667 7.96 0.00 0.00 4.52
188 189 2.936919 ATGAGAGTCACAAGTTGGCA 57.063 45.000 7.96 0.00 29.07 4.92
189 190 2.708216 TGAGAGTCACAAGTTGGCAA 57.292 45.000 7.96 0.00 29.07 4.52
190 191 2.564771 TGAGAGTCACAAGTTGGCAAG 58.435 47.619 7.96 0.00 29.07 4.01
191 192 1.265365 GAGAGTCACAAGTTGGCAAGC 59.735 52.381 7.96 0.00 29.07 4.01
192 193 0.312102 GAGTCACAAGTTGGCAAGCC 59.688 55.000 7.96 3.61 29.07 4.35
193 194 0.106519 AGTCACAAGTTGGCAAGCCT 60.107 50.000 12.96 0.00 36.94 4.58
194 195 1.142870 AGTCACAAGTTGGCAAGCCTA 59.857 47.619 12.96 1.22 36.94 3.93
195 196 1.953686 GTCACAAGTTGGCAAGCCTAA 59.046 47.619 12.96 2.46 36.94 2.69
196 197 2.030805 GTCACAAGTTGGCAAGCCTAAG 60.031 50.000 12.96 1.51 36.94 2.18
197 198 2.158682 TCACAAGTTGGCAAGCCTAAGA 60.159 45.455 12.96 0.00 36.94 2.10
198 199 2.227388 CACAAGTTGGCAAGCCTAAGAG 59.773 50.000 12.96 2.61 36.94 2.85
199 200 2.106511 ACAAGTTGGCAAGCCTAAGAGA 59.893 45.455 12.96 0.00 36.94 3.10
200 201 3.149196 CAAGTTGGCAAGCCTAAGAGAA 58.851 45.455 12.96 0.00 36.94 2.87
201 202 3.728385 AGTTGGCAAGCCTAAGAGAAT 57.272 42.857 12.96 0.00 36.94 2.40
202 203 3.615155 AGTTGGCAAGCCTAAGAGAATC 58.385 45.455 12.96 0.00 36.94 2.52
203 204 3.265479 AGTTGGCAAGCCTAAGAGAATCT 59.735 43.478 12.96 0.00 42.37 2.40
233 234 3.657015 TTTTGTGTGTATGCCATGTGG 57.343 42.857 0.00 0.00 38.53 4.17
234 235 1.543607 TTGTGTGTATGCCATGTGGG 58.456 50.000 0.54 0.00 40.85 4.61
235 236 0.323269 TGTGTGTATGCCATGTGGGG 60.323 55.000 0.54 0.00 37.04 4.96
243 244 2.597340 CCATGTGGGGCCCTAGTG 59.403 66.667 25.93 17.21 0.00 2.74
244 245 2.308722 CCATGTGGGGCCCTAGTGT 61.309 63.158 25.93 0.58 0.00 3.55
245 246 1.077501 CATGTGGGGCCCTAGTGTG 60.078 63.158 25.93 10.87 0.00 3.82
246 247 2.308722 ATGTGGGGCCCTAGTGTGG 61.309 63.158 25.93 0.00 0.00 4.17
252 253 2.751837 GCCCTAGTGTGGCTTGCC 60.752 66.667 4.43 4.43 45.70 4.52
253 254 3.081554 CCCTAGTGTGGCTTGCCT 58.918 61.111 13.18 0.00 0.00 4.75
254 255 1.910580 GCCCTAGTGTGGCTTGCCTA 61.911 60.000 13.18 0.00 45.70 3.93
255 256 0.618458 CCCTAGTGTGGCTTGCCTAA 59.382 55.000 13.18 0.00 0.00 2.69
256 257 1.407437 CCCTAGTGTGGCTTGCCTAAG 60.407 57.143 13.18 3.40 36.97 2.18
257 258 1.407437 CCTAGTGTGGCTTGCCTAAGG 60.407 57.143 13.18 8.19 34.40 2.69
258 259 1.279271 CTAGTGTGGCTTGCCTAAGGT 59.721 52.381 13.18 0.00 34.40 3.50
259 260 0.250901 AGTGTGGCTTGCCTAAGGTG 60.251 55.000 13.18 0.00 34.40 4.00
260 261 0.537371 GTGTGGCTTGCCTAAGGTGT 60.537 55.000 13.18 0.00 34.40 4.16
261 262 0.537143 TGTGGCTTGCCTAAGGTGTG 60.537 55.000 13.18 0.00 34.40 3.82
262 263 1.074775 TGGCTTGCCTAAGGTGTGG 59.925 57.895 13.18 0.00 34.40 4.17
268 269 3.339547 GCCTAAGGTGTGGCTTGAA 57.660 52.632 0.00 0.00 45.26 2.69
269 270 0.881796 GCCTAAGGTGTGGCTTGAAC 59.118 55.000 0.00 0.00 45.26 3.18
270 271 1.534729 CCTAAGGTGTGGCTTGAACC 58.465 55.000 0.00 0.00 0.00 3.62
271 272 1.202879 CCTAAGGTGTGGCTTGAACCA 60.203 52.381 0.00 0.00 36.37 3.67
272 273 2.582052 CTAAGGTGTGGCTTGAACCAA 58.418 47.619 0.00 0.00 42.70 3.67
273 274 1.859302 AAGGTGTGGCTTGAACCAAA 58.141 45.000 0.00 0.00 42.70 3.28
274 275 1.111277 AGGTGTGGCTTGAACCAAAC 58.889 50.000 0.00 0.00 45.86 2.93
276 277 1.921243 GTGTGGCTTGAACCAAACAC 58.079 50.000 0.00 0.00 45.87 3.32
277 278 1.476488 GTGTGGCTTGAACCAAACACT 59.524 47.619 0.00 0.00 45.87 3.55
278 279 1.748493 TGTGGCTTGAACCAAACACTC 59.252 47.619 12.25 0.00 42.70 3.51
279 280 1.748493 GTGGCTTGAACCAAACACTCA 59.252 47.619 0.00 0.00 42.70 3.41
280 281 1.748493 TGGCTTGAACCAAACACTCAC 59.252 47.619 0.00 0.00 36.55 3.51
281 282 1.067060 GGCTTGAACCAAACACTCACC 59.933 52.381 0.00 0.00 0.00 4.02
282 283 2.024414 GCTTGAACCAAACACTCACCT 58.976 47.619 0.00 0.00 0.00 4.00
283 284 3.211045 GCTTGAACCAAACACTCACCTA 58.789 45.455 0.00 0.00 0.00 3.08
284 285 3.630312 GCTTGAACCAAACACTCACCTAA 59.370 43.478 0.00 0.00 0.00 2.69
285 286 4.097286 GCTTGAACCAAACACTCACCTAAA 59.903 41.667 0.00 0.00 0.00 1.85
286 287 5.221244 GCTTGAACCAAACACTCACCTAAAT 60.221 40.000 0.00 0.00 0.00 1.40
287 288 6.682861 GCTTGAACCAAACACTCACCTAAATT 60.683 38.462 0.00 0.00 0.00 1.82
288 289 7.469456 GCTTGAACCAAACACTCACCTAAATTA 60.469 37.037 0.00 0.00 0.00 1.40
289 290 7.504924 TGAACCAAACACTCACCTAAATTAG 57.495 36.000 0.00 0.00 0.00 1.73
290 291 7.057894 TGAACCAAACACTCACCTAAATTAGT 58.942 34.615 0.00 0.00 0.00 2.24
291 292 7.227910 TGAACCAAACACTCACCTAAATTAGTC 59.772 37.037 0.00 0.00 0.00 2.59
292 293 6.597562 ACCAAACACTCACCTAAATTAGTCA 58.402 36.000 0.00 0.00 0.00 3.41
293 294 7.057894 ACCAAACACTCACCTAAATTAGTCAA 58.942 34.615 0.00 0.00 0.00 3.18
294 295 7.558444 ACCAAACACTCACCTAAATTAGTCAAA 59.442 33.333 0.00 0.00 0.00 2.69
295 296 7.860872 CCAAACACTCACCTAAATTAGTCAAAC 59.139 37.037 0.00 0.00 0.00 2.93
296 297 8.621286 CAAACACTCACCTAAATTAGTCAAACT 58.379 33.333 0.00 0.00 0.00 2.66
297 298 8.747538 AACACTCACCTAAATTAGTCAAACTT 57.252 30.769 0.00 0.00 0.00 2.66
298 299 8.154649 ACACTCACCTAAATTAGTCAAACTTG 57.845 34.615 0.00 0.00 0.00 3.16
299 300 7.078228 CACTCACCTAAATTAGTCAAACTTGC 58.922 38.462 0.00 0.00 0.00 4.01
300 301 6.206829 ACTCACCTAAATTAGTCAAACTTGCC 59.793 38.462 0.00 0.00 0.00 4.52
301 302 6.303839 TCACCTAAATTAGTCAAACTTGCCT 58.696 36.000 0.00 0.00 0.00 4.75
302 303 7.455058 TCACCTAAATTAGTCAAACTTGCCTA 58.545 34.615 0.00 0.00 0.00 3.93
303 304 7.940137 TCACCTAAATTAGTCAAACTTGCCTAA 59.060 33.333 0.00 0.00 33.77 2.69
304 305 8.021396 CACCTAAATTAGTCAAACTTGCCTAAC 58.979 37.037 0.00 0.00 32.29 2.34
305 306 7.176165 ACCTAAATTAGTCAAACTTGCCTAACC 59.824 37.037 0.00 0.00 32.29 2.85
306 307 7.393515 CCTAAATTAGTCAAACTTGCCTAACCT 59.606 37.037 0.00 0.00 32.29 3.50
307 308 7.597288 AAATTAGTCAAACTTGCCTAACCTT 57.403 32.000 0.00 0.00 32.29 3.50
308 309 8.700439 AAATTAGTCAAACTTGCCTAACCTTA 57.300 30.769 0.00 0.00 32.29 2.69
309 310 7.923414 ATTAGTCAAACTTGCCTAACCTTAG 57.077 36.000 0.00 0.00 32.29 2.18
318 319 2.871096 CCTAACCTTAGGTGTGGCAA 57.129 50.000 3.99 0.00 44.26 4.52
319 320 2.433436 CCTAACCTTAGGTGTGGCAAC 58.567 52.381 3.99 0.00 44.26 4.17
320 321 2.433436 CTAACCTTAGGTGTGGCAACC 58.567 52.381 3.99 9.86 40.85 3.77
335 336 3.452755 GCAACCTTTGGCAAAGTTAGT 57.547 42.857 31.68 22.14 36.77 2.24
336 337 3.381045 GCAACCTTTGGCAAAGTTAGTC 58.619 45.455 31.68 16.47 36.77 2.59
337 338 3.181480 GCAACCTTTGGCAAAGTTAGTCA 60.181 43.478 31.68 1.65 36.77 3.41
338 339 4.359706 CAACCTTTGGCAAAGTTAGTCAC 58.640 43.478 31.68 0.00 36.77 3.67
339 340 3.626930 ACCTTTGGCAAAGTTAGTCACA 58.373 40.909 31.68 0.20 36.77 3.58
340 341 4.020543 ACCTTTGGCAAAGTTAGTCACAA 58.979 39.130 31.68 0.00 36.77 3.33
341 342 4.464597 ACCTTTGGCAAAGTTAGTCACAAA 59.535 37.500 31.68 0.00 36.77 2.83
342 343 4.803613 CCTTTGGCAAAGTTAGTCACAAAC 59.196 41.667 31.68 0.00 36.77 2.93
343 344 4.379339 TTGGCAAAGTTAGTCACAAACC 57.621 40.909 0.00 0.00 0.00 3.27
344 345 3.357203 TGGCAAAGTTAGTCACAAACCA 58.643 40.909 0.00 0.00 0.00 3.67
345 346 3.764434 TGGCAAAGTTAGTCACAAACCAA 59.236 39.130 0.00 0.00 0.00 3.67
346 347 4.220821 TGGCAAAGTTAGTCACAAACCAAA 59.779 37.500 0.00 0.00 0.00 3.28
347 348 4.565166 GGCAAAGTTAGTCACAAACCAAAC 59.435 41.667 0.00 0.00 0.00 2.93
348 349 5.164954 GCAAAGTTAGTCACAAACCAAACA 58.835 37.500 0.00 0.00 30.35 2.83
349 350 5.635700 GCAAAGTTAGTCACAAACCAAACAA 59.364 36.000 0.00 0.00 30.35 2.83
350 351 6.312672 GCAAAGTTAGTCACAAACCAAACAAT 59.687 34.615 0.00 0.00 30.35 2.71
351 352 7.464045 GCAAAGTTAGTCACAAACCAAACAATC 60.464 37.037 0.00 0.00 30.35 2.67
352 353 6.144078 AGTTAGTCACAAACCAAACAATCC 57.856 37.500 0.00 0.00 30.35 3.01
353 354 5.068591 AGTTAGTCACAAACCAAACAATCCC 59.931 40.000 0.00 0.00 30.35 3.85
354 355 3.642141 AGTCACAAACCAAACAATCCCT 58.358 40.909 0.00 0.00 0.00 4.20
355 356 4.030216 AGTCACAAACCAAACAATCCCTT 58.970 39.130 0.00 0.00 0.00 3.95
356 357 5.205056 AGTCACAAACCAAACAATCCCTTA 58.795 37.500 0.00 0.00 0.00 2.69
357 358 5.301805 AGTCACAAACCAAACAATCCCTTAG 59.698 40.000 0.00 0.00 0.00 2.18
358 359 5.300792 GTCACAAACCAAACAATCCCTTAGA 59.699 40.000 0.00 0.00 0.00 2.10
359 360 5.300792 TCACAAACCAAACAATCCCTTAGAC 59.699 40.000 0.00 0.00 0.00 2.59
360 361 5.301805 CACAAACCAAACAATCCCTTAGACT 59.698 40.000 0.00 0.00 0.00 3.24
361 362 6.488683 CACAAACCAAACAATCCCTTAGACTA 59.511 38.462 0.00 0.00 0.00 2.59
362 363 6.715264 ACAAACCAAACAATCCCTTAGACTAG 59.285 38.462 0.00 0.00 0.00 2.57
363 364 6.449830 AACCAAACAATCCCTTAGACTAGT 57.550 37.500 0.00 0.00 0.00 2.57
364 365 5.805728 ACCAAACAATCCCTTAGACTAGTG 58.194 41.667 0.00 0.00 0.00 2.74
365 366 5.309806 ACCAAACAATCCCTTAGACTAGTGT 59.690 40.000 0.00 0.00 0.00 3.55
366 367 5.875359 CCAAACAATCCCTTAGACTAGTGTC 59.125 44.000 0.00 0.00 43.22 3.67
367 368 6.464222 CAAACAATCCCTTAGACTAGTGTCA 58.536 40.000 0.00 0.00 45.20 3.58
368 369 6.875972 AACAATCCCTTAGACTAGTGTCAT 57.124 37.500 0.00 0.00 45.20 3.06
369 370 7.973048 AACAATCCCTTAGACTAGTGTCATA 57.027 36.000 0.00 0.00 45.20 2.15
370 371 8.554490 AACAATCCCTTAGACTAGTGTCATAT 57.446 34.615 0.00 0.00 45.20 1.78
371 372 7.957002 ACAATCCCTTAGACTAGTGTCATATG 58.043 38.462 0.00 0.00 45.20 1.78
372 373 6.597832 ATCCCTTAGACTAGTGTCATATGC 57.402 41.667 0.00 0.00 45.20 3.14
373 374 5.454966 TCCCTTAGACTAGTGTCATATGCA 58.545 41.667 0.00 0.00 45.20 3.96
374 375 6.077993 TCCCTTAGACTAGTGTCATATGCAT 58.922 40.000 3.79 3.79 45.20 3.96
375 376 6.015095 TCCCTTAGACTAGTGTCATATGCATG 60.015 42.308 10.16 0.00 45.20 4.06
376 377 6.015095 CCCTTAGACTAGTGTCATATGCATGA 60.015 42.308 10.16 0.00 45.20 3.07
395 396 9.712305 ATGCATGACACTAGTATAAATTACTCC 57.288 33.333 0.00 0.00 0.00 3.85
396 397 8.700973 TGCATGACACTAGTATAAATTACTCCA 58.299 33.333 0.00 0.00 0.00 3.86
397 398 8.979574 GCATGACACTAGTATAAATTACTCCAC 58.020 37.037 0.00 0.00 0.00 4.02
400 401 9.251440 TGACACTAGTATAAATTACTCCACACT 57.749 33.333 0.00 0.00 0.00 3.55
409 410 8.839310 ATAAATTACTCCACACTATGATCAGC 57.161 34.615 0.09 0.00 0.00 4.26
417 418 5.053145 CCACACTATGATCAGCCTTAGTTC 58.947 45.833 0.09 0.00 0.00 3.01
423 424 6.841755 ACTATGATCAGCCTTAGTTCCTTACT 59.158 38.462 0.09 0.00 41.04 2.24
424 425 5.344743 TGATCAGCCTTAGTTCCTTACTG 57.655 43.478 0.00 0.00 37.73 2.74
426 427 2.094182 TCAGCCTTAGTTCCTTACTGCG 60.094 50.000 0.00 0.00 37.73 5.18
430 431 3.129988 GCCTTAGTTCCTTACTGCGTCTA 59.870 47.826 0.00 0.00 37.73 2.59
431 432 4.202131 GCCTTAGTTCCTTACTGCGTCTAT 60.202 45.833 0.00 0.00 37.73 1.98
432 433 5.521544 CCTTAGTTCCTTACTGCGTCTATC 58.478 45.833 0.00 0.00 37.73 2.08
433 434 5.067413 CCTTAGTTCCTTACTGCGTCTATCA 59.933 44.000 0.00 0.00 37.73 2.15
434 435 4.373348 AGTTCCTTACTGCGTCTATCAC 57.627 45.455 0.00 0.00 35.19 3.06
495 497 4.677779 GCGACCAATTAAGCCATCACAAAT 60.678 41.667 0.00 0.00 0.00 2.32
522 524 2.088178 GGACGCAAAAGCATTGCCG 61.088 57.895 18.10 15.43 42.10 5.69
524 526 0.662970 GACGCAAAAGCATTGCCGAA 60.663 50.000 18.10 0.00 42.10 4.30
528 530 2.605030 GCAAAAGCATTGCCGAATGTA 58.395 42.857 14.36 0.00 41.09 2.29
552 554 2.277969 TGCAACCAAACATGTTTGCTG 58.722 42.857 35.57 32.04 46.25 4.41
557 559 3.260740 ACCAAACATGTTTGCTGTTGTG 58.739 40.909 35.57 25.03 46.25 3.33
558 560 3.056250 ACCAAACATGTTTGCTGTTGTGA 60.056 39.130 35.57 0.00 46.25 3.58
574 576 1.340502 TGTGATATGCGCCTTTTCCCA 60.341 47.619 4.18 0.00 0.00 4.37
599 602 4.753516 TGCCAAGTACTGTATGTGCTAT 57.246 40.909 0.00 0.00 40.73 2.97
873 940 1.338960 CCCGCAATTTGAGGCCATTTT 60.339 47.619 13.18 0.00 35.89 1.82
883 950 1.604278 GAGGCCATTTTCTATGCGACC 59.396 52.381 5.01 0.00 0.00 4.79
896 963 2.358247 CGACCCCAACCGAACCAG 60.358 66.667 0.00 0.00 0.00 4.00
897 964 2.033602 GACCCCAACCGAACCAGG 59.966 66.667 0.00 0.00 37.30 4.45
900 967 4.278513 CCCAACCGAACCAGGCCA 62.279 66.667 5.01 0.00 33.69 5.36
901 968 2.983592 CCAACCGAACCAGGCCAC 60.984 66.667 5.01 0.00 33.69 5.01
903 970 4.636435 AACCGAACCAGGCCACCG 62.636 66.667 5.01 0.00 33.69 4.94
919 986 4.640855 CGTCGGGTCGCACTGTGT 62.641 66.667 9.86 0.00 0.00 3.72
920 987 3.036084 GTCGGGTCGCACTGTGTG 61.036 66.667 14.94 14.94 36.51 3.82
925 992 3.527186 GTCGCACTGTGTGACGAG 58.473 61.111 31.21 8.46 46.14 4.18
926 993 2.354656 TCGCACTGTGTGACGAGC 60.355 61.111 19.29 0.00 37.25 5.03
928 995 2.354656 GCACTGTGTGACGAGCGA 60.355 61.111 9.86 0.00 35.23 4.93
929 996 1.949133 GCACTGTGTGACGAGCGAA 60.949 57.895 9.86 0.00 35.23 4.70
930 997 1.846648 CACTGTGTGACGAGCGAAC 59.153 57.895 0.00 0.00 35.23 3.95
931 998 1.299926 ACTGTGTGACGAGCGAACC 60.300 57.895 0.00 0.00 0.00 3.62
932 999 1.299850 CTGTGTGACGAGCGAACCA 60.300 57.895 0.00 0.00 0.00 3.67
933 1000 1.278172 CTGTGTGACGAGCGAACCAG 61.278 60.000 0.00 1.90 0.00 4.00
935 1002 2.432628 GTGACGAGCGAACCAGGG 60.433 66.667 0.00 0.00 0.00 4.45
936 1003 3.691342 TGACGAGCGAACCAGGGG 61.691 66.667 0.00 0.00 0.00 4.79
1150 1272 1.392710 CGAGTAAGCGTCCATCCCCT 61.393 60.000 0.00 0.00 0.00 4.79
1153 1275 0.179054 GTAAGCGTCCATCCCCTTCC 60.179 60.000 0.00 0.00 0.00 3.46
1154 1276 1.342672 TAAGCGTCCATCCCCTTCCC 61.343 60.000 0.00 0.00 0.00 3.97
1155 1277 3.090532 GCGTCCATCCCCTTCCCT 61.091 66.667 0.00 0.00 0.00 4.20
1156 1278 2.680370 GCGTCCATCCCCTTCCCTT 61.680 63.158 0.00 0.00 0.00 3.95
1159 1281 0.107165 GTCCATCCCCTTCCCTTTCG 60.107 60.000 0.00 0.00 0.00 3.46
1161 1283 1.819632 CATCCCCTTCCCTTTCGCG 60.820 63.158 0.00 0.00 0.00 5.87
1162 1284 1.993391 ATCCCCTTCCCTTTCGCGA 60.993 57.895 3.71 3.71 0.00 5.87
1178 1304 2.409651 GACCTCGCGCTCTCGATT 59.590 61.111 5.56 0.00 37.87 3.34
1182 1308 1.656875 CTCGCGCTCTCGATTGGAG 60.657 63.158 5.56 0.00 44.58 3.86
1205 1335 0.721718 CTCGGTTTCGCTGATTGGAC 59.278 55.000 0.00 0.00 36.13 4.02
1208 1338 0.169009 GGTTTCGCTGATTGGACTGC 59.831 55.000 0.00 0.00 0.00 4.40
1209 1339 0.169009 GTTTCGCTGATTGGACTGCC 59.831 55.000 0.00 0.00 0.00 4.85
1212 1342 0.391661 TCGCTGATTGGACTGCCTTC 60.392 55.000 0.00 0.00 34.31 3.46
1214 1344 0.674895 GCTGATTGGACTGCCTTCGT 60.675 55.000 0.00 0.00 34.31 3.85
1307 1450 4.803426 CGGAGAGTGGTGAGCCGC 62.803 72.222 0.00 0.00 45.35 6.53
1337 1480 1.096416 TGCCTCGTTTCCGTGTTTTT 58.904 45.000 0.00 0.00 35.01 1.94
1341 1484 1.002142 CTCGTTTCCGTGTTTTTCCCC 60.002 52.381 0.00 0.00 35.01 4.81
1342 1485 0.317186 CGTTTCCGTGTTTTTCCCCG 60.317 55.000 0.00 0.00 0.00 5.73
1343 1486 0.740149 GTTTCCGTGTTTTTCCCCGT 59.260 50.000 0.00 0.00 0.00 5.28
1347 1490 1.526455 CGTGTTTTTCCCCGTCCCA 60.526 57.895 0.00 0.00 0.00 4.37
1364 1507 2.092323 CCCAAATCCTCGTTTCCTTCC 58.908 52.381 0.00 0.00 0.00 3.46
1367 1510 0.613777 AATCCTCGTTTCCTTCCGCT 59.386 50.000 0.00 0.00 0.00 5.52
1418 1561 0.028770 CGTCTGATCTGCGTCTCCTC 59.971 60.000 0.00 0.00 0.00 3.71
1487 1660 8.669243 GCCTGGTATCTGAATTAATATAACTGC 58.331 37.037 0.00 0.00 0.00 4.40
1516 1690 7.805071 GGAATCCATTTTCTACATCGCTTATTG 59.195 37.037 0.00 0.00 0.00 1.90
1530 1705 5.043903 TCGCTTATTGAGTCTTGAGTATGC 58.956 41.667 0.00 0.00 0.00 3.14
1555 1730 2.752238 AGAGACTCCGCAGACCCG 60.752 66.667 0.00 0.00 0.00 5.28
1556 1731 3.063084 GAGACTCCGCAGACCCGT 61.063 66.667 0.00 0.00 0.00 5.28
1615 1790 0.730840 GATTTAGGAACCGGCGGTTG 59.269 55.000 45.21 15.05 46.95 3.77
1668 1843 2.758089 CGCTCTTCATGGCAGCCAC 61.758 63.158 19.10 0.19 35.80 5.01
1690 1866 1.468985 TCTGCAGAGTAGTGAGGAGC 58.531 55.000 13.74 0.00 0.00 4.70
1694 1871 1.679153 GCAGAGTAGTGAGGAGCCTAC 59.321 57.143 0.00 0.00 34.96 3.18
1695 1872 2.946341 GCAGAGTAGTGAGGAGCCTACA 60.946 54.545 0.00 0.00 36.77 2.74
1733 1910 0.958822 ATTTCCTTCAACCGTGCCAC 59.041 50.000 0.00 0.00 0.00 5.01
1742 1919 2.932614 TCAACCGTGCCACAAAATTTTG 59.067 40.909 25.73 25.73 43.62 2.44
1776 1971 6.540189 GCTTCTTTTAATCTGCATCTCCTACA 59.460 38.462 0.00 0.00 0.00 2.74
1871 2066 5.163405 GCTGTCAGGAGTCCATCTTGTATTA 60.163 44.000 12.86 0.00 36.43 0.98
1885 2080 8.345565 CCATCTTGTATTAGTTCCTGTATTTGC 58.654 37.037 0.00 0.00 0.00 3.68
1888 2083 9.109393 TCTTGTATTAGTTCCTGTATTTGCATC 57.891 33.333 0.00 0.00 0.00 3.91
1919 2117 5.428184 AGACCAAGGAATTAGGAACTCAG 57.572 43.478 0.00 0.00 41.75 3.35
1938 2136 7.487822 ACTCAGAAATCTTCACCAAGAGATA 57.512 36.000 0.00 0.00 42.13 1.98
2085 2377 3.054802 CAGACCCTGGAAGACTAAGCAAT 60.055 47.826 0.00 0.00 34.07 3.56
2095 2390 6.037500 TGGAAGACTAAGCAATGATTCATTCG 59.962 38.462 8.95 6.68 31.05 3.34
2179 2482 2.959465 AAAGCTTGACCTAGCCAGTT 57.041 45.000 0.00 0.00 42.20 3.16
2226 2529 1.111277 GTTGTTCAGTGGTGGCCTTT 58.889 50.000 3.32 0.00 0.00 3.11
2242 2545 6.398095 GTGGCCTTTATGCTTAATTGAAGTT 58.602 36.000 3.32 0.00 37.49 2.66
2409 2724 5.353394 TCATTAGAAGTCCCACATACACC 57.647 43.478 0.00 0.00 0.00 4.16
2448 2763 4.339872 AAATTTGCAGCTCCAATTCACA 57.660 36.364 0.00 0.00 0.00 3.58
2472 2787 7.069950 ACAACTAGGCTTTCTCTTCCAATTTTT 59.930 33.333 0.00 0.00 0.00 1.94
2538 3062 4.696479 AGTTGACACTTTGACCAGAGAT 57.304 40.909 0.00 0.00 0.00 2.75
2553 3077 4.130118 CCAGAGATGTTGTAGTAATGGGC 58.870 47.826 0.00 0.00 0.00 5.36
2630 3161 1.701847 AGAAGGCAATGACTGGACAGT 59.298 47.619 4.35 4.35 45.84 3.55
2891 3434 3.076621 GTGGAGAATGTGAGTTCATGCA 58.923 45.455 0.00 0.00 0.00 3.96
2904 3447 4.553323 AGTTCATGCAGCTTTCAATTGTC 58.447 39.130 5.13 0.00 0.00 3.18
2908 3451 6.270156 TCATGCAGCTTTCAATTGTCATTA 57.730 33.333 5.13 0.00 0.00 1.90
2930 3511 0.178992 TTCTTGCACCCCTTCCTGTG 60.179 55.000 0.00 0.00 35.58 3.66
2934 3515 4.326255 CACCCCTTCCTGTGCATC 57.674 61.111 0.00 0.00 0.00 3.91
2948 3529 6.182627 TCCTGTGCATCTGATAAGTTTCATT 58.817 36.000 0.00 0.00 0.00 2.57
3366 3979 2.486907 GCATCTTGATGCTCCTAGGCTT 60.487 50.000 23.56 0.00 43.79 4.35
3466 4079 8.314751 AGTTTATACAAGCTGTTGATGACTAGT 58.685 33.333 0.00 0.00 37.10 2.57
3512 4125 9.964303 ACATGTATATTTATACCGAACGTGTTA 57.036 29.630 0.00 0.00 38.17 2.41
3669 4297 2.420547 GCAGATGATAGTGGTGGCTCAA 60.421 50.000 0.00 0.00 0.00 3.02
4103 5046 2.744741 TGCGACAGTGAAACACTTTTGA 59.255 40.909 0.00 0.00 42.59 2.69
4111 5054 7.158021 ACAGTGAAACACTTTTGAAAAATCCA 58.842 30.769 0.00 0.00 42.59 3.41
4157 5100 5.090083 CCTCGTCTTTTTGTGAAAACGAAA 58.910 37.500 0.00 0.00 34.76 3.46
4455 5398 1.306997 GTCCAGGTCCAGATCCCCA 60.307 63.158 0.00 0.00 0.00 4.96
4474 5417 3.369892 CCCAGGTATCCTTTGACTCACAG 60.370 52.174 0.00 0.00 0.00 3.66
4656 5599 6.716934 TGCCTGTGGTTGATTAGTTAAAAA 57.283 33.333 0.00 0.00 0.00 1.94
4746 5689 7.201435 GGATCTTTTATTTTTGGTCGCATGTTC 60.201 37.037 0.00 0.00 0.00 3.18
4841 5833 2.309528 TGAGCCGTTTTATCAGCGAT 57.690 45.000 0.00 0.00 0.00 4.58
4922 5925 4.999469 TGATGGTGATATTGTATGGGCT 57.001 40.909 0.00 0.00 0.00 5.19
4923 5926 6.641161 ATGATGGTGATATTGTATGGGCTA 57.359 37.500 0.00 0.00 0.00 3.93
4924 5927 6.641161 TGATGGTGATATTGTATGGGCTAT 57.359 37.500 0.00 0.00 0.00 2.97
4925 5928 6.653020 TGATGGTGATATTGTATGGGCTATC 58.347 40.000 0.00 0.00 0.00 2.08
4926 5929 6.215227 TGATGGTGATATTGTATGGGCTATCA 59.785 38.462 0.00 0.00 0.00 2.15
4927 5930 6.641161 TGGTGATATTGTATGGGCTATCAT 57.359 37.500 0.00 0.00 34.22 2.45
4928 5931 6.653020 TGGTGATATTGTATGGGCTATCATC 58.347 40.000 0.00 0.00 34.22 2.92
4929 5932 5.755375 GGTGATATTGTATGGGCTATCATCG 59.245 44.000 0.00 0.00 34.22 3.84
4930 5933 5.755375 GTGATATTGTATGGGCTATCATCGG 59.245 44.000 0.00 0.00 34.22 4.18
4931 5934 2.472695 TTGTATGGGCTATCATCGGC 57.527 50.000 0.00 0.00 0.00 5.54
4947 5950 0.918619 CGGCGTGTTAGGTATTGTCG 59.081 55.000 0.00 0.00 0.00 4.35
4960 5963 9.924650 GTTAGGTATTGTCGATTTGGTCTATAT 57.075 33.333 0.00 0.00 0.00 0.86
4985 5988 2.738314 GCAGAACCAAATGAATTGTGCC 59.262 45.455 7.72 0.00 37.32 5.01
4989 5992 1.070038 CCAAATGAATTGTGCCGTGC 58.930 50.000 0.00 0.00 37.32 5.34
5005 6008 1.267806 CGTGCTGCCAAATTCAGACTT 59.732 47.619 0.00 0.00 33.54 3.01
5006 6009 2.483877 CGTGCTGCCAAATTCAGACTTA 59.516 45.455 0.00 0.00 33.54 2.24
5007 6010 3.667960 CGTGCTGCCAAATTCAGACTTAC 60.668 47.826 0.00 0.00 33.54 2.34
5009 6012 3.753272 TGCTGCCAAATTCAGACTTACTC 59.247 43.478 0.00 0.00 33.54 2.59
5010 6013 4.006319 GCTGCCAAATTCAGACTTACTCT 58.994 43.478 0.00 0.00 33.54 3.24
5013 6016 5.620206 TGCCAAATTCAGACTTACTCTTCA 58.380 37.500 0.00 0.00 0.00 3.02
5014 6017 5.702670 TGCCAAATTCAGACTTACTCTTCAG 59.297 40.000 0.00 0.00 0.00 3.02
5015 6018 5.123027 GCCAAATTCAGACTTACTCTTCAGG 59.877 44.000 0.00 0.00 0.00 3.86
5016 6019 6.234177 CCAAATTCAGACTTACTCTTCAGGT 58.766 40.000 0.00 0.00 0.00 4.00
5062 6132 7.758613 TTTCCGGATGTTTAAACAAAAAGTC 57.241 32.000 23.97 15.94 43.03 3.01
5068 6138 7.039270 GGATGTTTAAACAAAAAGTCACCACT 58.961 34.615 23.97 3.66 43.03 4.00
5115 6185 4.758688 CCTGATGCACACTGAATGTACTA 58.241 43.478 0.00 0.00 40.64 1.82
5123 6193 3.830755 ACACTGAATGTACTAACCCGAGT 59.169 43.478 0.00 0.00 40.88 4.18
5146 6216 2.036256 GGCTTGCCACTCCACCAT 59.964 61.111 6.79 0.00 0.00 3.55
5154 6224 1.100510 CCACTCCACCATGAATGCAG 58.899 55.000 0.00 0.00 0.00 4.41
5163 6233 3.090790 ACCATGAATGCAGCATACACAA 58.909 40.909 8.75 0.00 0.00 3.33
5181 6251 4.228210 ACACAACCCATGGATCAGATTACT 59.772 41.667 15.22 0.00 0.00 2.24
5187 6257 4.562347 CCCATGGATCAGATTACTTCTCGG 60.562 50.000 15.22 0.00 29.93 4.63
5188 6258 4.039730 CCATGGATCAGATTACTTCTCGGT 59.960 45.833 5.56 0.00 29.93 4.69
5190 6260 3.637229 TGGATCAGATTACTTCTCGGTCC 59.363 47.826 0.00 0.00 35.23 4.46
5191 6261 3.304794 GGATCAGATTACTTCTCGGTCCG 60.305 52.174 4.39 4.39 29.16 4.79
5192 6262 2.719739 TCAGATTACTTCTCGGTCCGT 58.280 47.619 11.88 0.00 29.93 4.69
5231 6307 2.517919 GGGGGAGATGTCCATGCC 59.482 66.667 11.62 2.62 46.07 4.40
5232 6308 2.111878 GGGGAGATGTCCATGCCG 59.888 66.667 11.62 0.00 46.07 5.69
5233 6309 2.443394 GGGGAGATGTCCATGCCGA 61.443 63.158 11.62 0.00 46.07 5.54
5234 6310 1.526887 GGGAGATGTCCATGCCGAA 59.473 57.895 11.62 0.00 46.07 4.30
5235 6311 0.533755 GGGAGATGTCCATGCCGAAG 60.534 60.000 11.62 0.00 46.07 3.79
5236 6312 0.179000 GGAGATGTCCATGCCGAAGT 59.821 55.000 3.49 0.00 43.31 3.01
5237 6313 1.412710 GGAGATGTCCATGCCGAAGTA 59.587 52.381 3.49 0.00 43.31 2.24
5238 6314 2.546795 GGAGATGTCCATGCCGAAGTAG 60.547 54.545 3.49 0.00 43.31 2.57
5239 6315 2.362397 GAGATGTCCATGCCGAAGTAGA 59.638 50.000 0.00 0.00 0.00 2.59
5240 6316 2.766263 AGATGTCCATGCCGAAGTAGAA 59.234 45.455 0.00 0.00 0.00 2.10
5241 6317 3.197766 AGATGTCCATGCCGAAGTAGAAA 59.802 43.478 0.00 0.00 0.00 2.52
5242 6318 2.972625 TGTCCATGCCGAAGTAGAAAG 58.027 47.619 0.00 0.00 0.00 2.62
5243 6319 2.565391 TGTCCATGCCGAAGTAGAAAGA 59.435 45.455 0.00 0.00 0.00 2.52
5539 6615 2.606275 GCAGCCTCACGCCTTATAC 58.394 57.895 0.00 0.00 38.78 1.47
5540 6616 0.880718 GCAGCCTCACGCCTTATACC 60.881 60.000 0.00 0.00 38.78 2.73
5541 6617 0.597637 CAGCCTCACGCCTTATACCG 60.598 60.000 0.00 0.00 38.78 4.02
5542 6618 0.754217 AGCCTCACGCCTTATACCGA 60.754 55.000 0.00 0.00 38.78 4.69
5543 6619 0.103572 GCCTCACGCCTTATACCGAA 59.896 55.000 0.00 0.00 0.00 4.30
5544 6620 1.849097 CCTCACGCCTTATACCGAAC 58.151 55.000 0.00 0.00 0.00 3.95
5545 6621 1.407979 CCTCACGCCTTATACCGAACT 59.592 52.381 0.00 0.00 0.00 3.01
5546 6622 2.620115 CCTCACGCCTTATACCGAACTA 59.380 50.000 0.00 0.00 0.00 2.24
5547 6623 3.067180 CCTCACGCCTTATACCGAACTAA 59.933 47.826 0.00 0.00 0.00 2.24
5548 6624 4.440525 CCTCACGCCTTATACCGAACTAAA 60.441 45.833 0.00 0.00 0.00 1.85
5549 6625 5.070770 TCACGCCTTATACCGAACTAAAA 57.929 39.130 0.00 0.00 0.00 1.52
5550 6626 4.864247 TCACGCCTTATACCGAACTAAAAC 59.136 41.667 0.00 0.00 0.00 2.43
5551 6627 3.859386 ACGCCTTATACCGAACTAAAACG 59.141 43.478 0.00 0.00 0.00 3.60
5552 6628 3.302028 CGCCTTATACCGAACTAAAACGC 60.302 47.826 0.00 0.00 0.00 4.84
5553 6629 3.618150 GCCTTATACCGAACTAAAACGCA 59.382 43.478 0.00 0.00 0.00 5.24
5554 6630 4.493057 GCCTTATACCGAACTAAAACGCAC 60.493 45.833 0.00 0.00 0.00 5.34
5555 6631 4.259530 CCTTATACCGAACTAAAACGCACG 60.260 45.833 0.00 0.00 0.00 5.34
5556 6632 1.417372 TACCGAACTAAAACGCACGG 58.583 50.000 0.00 0.00 44.77 4.94
5557 6633 1.223417 ACCGAACTAAAACGCACGGG 61.223 55.000 0.00 0.00 43.76 5.28
5558 6634 1.154543 CGAACTAAAACGCACGGGC 60.155 57.895 0.00 0.00 0.00 6.13
5573 6649 4.097361 GGCGGGAGGACCTTGGTC 62.097 72.222 11.13 11.13 36.97 4.02
5574 6650 3.319198 GCGGGAGGACCTTGGTCA 61.319 66.667 19.90 0.00 36.97 4.02
5575 6651 2.890766 GCGGGAGGACCTTGGTCAA 61.891 63.158 19.90 0.00 36.97 3.18
5576 6652 1.758592 CGGGAGGACCTTGGTCAAA 59.241 57.895 19.90 0.00 36.97 2.69
5577 6653 0.109723 CGGGAGGACCTTGGTCAAAA 59.890 55.000 19.90 0.00 36.97 2.44
5578 6654 1.882352 CGGGAGGACCTTGGTCAAAAG 60.882 57.143 19.90 5.01 36.97 2.27
5579 6655 1.423921 GGGAGGACCTTGGTCAAAAGA 59.576 52.381 19.90 0.00 35.85 2.52
5580 6656 2.158519 GGGAGGACCTTGGTCAAAAGAA 60.159 50.000 19.90 0.00 35.85 2.52
5581 6657 2.885266 GGAGGACCTTGGTCAAAAGAAC 59.115 50.000 19.90 2.59 0.00 3.01
5582 6658 2.885266 GAGGACCTTGGTCAAAAGAACC 59.115 50.000 19.90 2.43 37.31 3.62
5583 6659 2.514160 AGGACCTTGGTCAAAAGAACCT 59.486 45.455 19.90 4.62 37.69 3.50
5584 6660 3.720002 AGGACCTTGGTCAAAAGAACCTA 59.280 43.478 19.90 0.00 37.69 3.08
5585 6661 4.167307 AGGACCTTGGTCAAAAGAACCTAA 59.833 41.667 19.90 0.00 37.69 2.69
5586 6662 4.277672 GGACCTTGGTCAAAAGAACCTAAC 59.722 45.833 19.90 0.00 37.69 2.34
5587 6663 4.212716 ACCTTGGTCAAAAGAACCTAACC 58.787 43.478 0.00 0.00 37.69 2.85
5588 6664 3.572682 CCTTGGTCAAAAGAACCTAACCC 59.427 47.826 0.00 0.00 37.69 4.11
5589 6665 3.955524 TGGTCAAAAGAACCTAACCCA 57.044 42.857 0.00 0.00 37.69 4.51
5590 6666 4.463050 TGGTCAAAAGAACCTAACCCAT 57.537 40.909 0.00 0.00 37.69 4.00
5591 6667 5.586155 TGGTCAAAAGAACCTAACCCATA 57.414 39.130 0.00 0.00 37.69 2.74
5592 6668 6.147437 TGGTCAAAAGAACCTAACCCATAT 57.853 37.500 0.00 0.00 37.69 1.78
5593 6669 7.273457 TGGTCAAAAGAACCTAACCCATATA 57.727 36.000 0.00 0.00 37.69 0.86
5594 6670 7.343357 TGGTCAAAAGAACCTAACCCATATAG 58.657 38.462 0.00 0.00 37.69 1.31
5595 6671 7.183112 TGGTCAAAAGAACCTAACCCATATAGA 59.817 37.037 0.00 0.00 37.69 1.98
5596 6672 7.498239 GGTCAAAAGAACCTAACCCATATAGAC 59.502 40.741 0.00 0.00 33.78 2.59
5597 6673 7.224167 GTCAAAAGAACCTAACCCATATAGACG 59.776 40.741 0.00 0.00 0.00 4.18
5598 6674 4.868314 AGAACCTAACCCATATAGACGC 57.132 45.455 0.00 0.00 0.00 5.19
5599 6675 3.577415 AGAACCTAACCCATATAGACGCC 59.423 47.826 0.00 0.00 0.00 5.68
5600 6676 3.255634 ACCTAACCCATATAGACGCCT 57.744 47.619 0.00 0.00 0.00 5.52
5601 6677 3.163467 ACCTAACCCATATAGACGCCTC 58.837 50.000 0.00 0.00 0.00 4.70
5602 6678 3.162666 CCTAACCCATATAGACGCCTCA 58.837 50.000 0.00 0.00 0.00 3.86
5603 6679 3.576982 CCTAACCCATATAGACGCCTCAA 59.423 47.826 0.00 0.00 0.00 3.02
5604 6680 4.039973 CCTAACCCATATAGACGCCTCAAA 59.960 45.833 0.00 0.00 0.00 2.69
5605 6681 3.470645 ACCCATATAGACGCCTCAAAC 57.529 47.619 0.00 0.00 0.00 2.93
5606 6682 2.104281 ACCCATATAGACGCCTCAAACC 59.896 50.000 0.00 0.00 0.00 3.27
5607 6683 2.404215 CCATATAGACGCCTCAAACCG 58.596 52.381 0.00 0.00 0.00 4.44
5608 6684 2.404215 CATATAGACGCCTCAAACCGG 58.596 52.381 0.00 0.00 0.00 5.28
5609 6685 1.477553 TATAGACGCCTCAAACCGGT 58.522 50.000 0.00 0.00 0.00 5.28
5610 6686 0.175073 ATAGACGCCTCAAACCGGTC 59.825 55.000 8.04 0.00 0.00 4.79
5611 6687 0.896940 TAGACGCCTCAAACCGGTCT 60.897 55.000 8.04 0.00 0.00 3.85
5612 6688 1.737008 GACGCCTCAAACCGGTCTC 60.737 63.158 8.04 0.00 0.00 3.36
5613 6689 2.342279 CGCCTCAAACCGGTCTCA 59.658 61.111 8.04 0.00 0.00 3.27
5614 6690 1.301401 CGCCTCAAACCGGTCTCAA 60.301 57.895 8.04 0.00 0.00 3.02
5615 6691 0.882927 CGCCTCAAACCGGTCTCAAA 60.883 55.000 8.04 0.00 0.00 2.69
5616 6692 0.591659 GCCTCAAACCGGTCTCAAAC 59.408 55.000 8.04 0.00 0.00 2.93
5617 6693 0.865769 CCTCAAACCGGTCTCAAACG 59.134 55.000 8.04 0.00 0.00 3.60
5618 6694 1.578583 CTCAAACCGGTCTCAAACGT 58.421 50.000 8.04 0.00 0.00 3.99
5619 6695 1.937899 CTCAAACCGGTCTCAAACGTT 59.062 47.619 8.04 0.00 0.00 3.99
5620 6696 1.935199 TCAAACCGGTCTCAAACGTTC 59.065 47.619 8.04 0.00 0.00 3.95
5621 6697 0.932399 AAACCGGTCTCAAACGTTCG 59.068 50.000 8.04 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
1 2 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
2 3 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
3 4 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
4 5 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
5 6 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
6 7 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
7 8 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
10 11 4.514401 GTCCCATGACTAAAAGTAGTGGG 58.486 47.826 17.22 17.22 46.41 4.61
21 22 5.869688 TGGATACGGTTTAGTCCCATGACTA 60.870 44.000 0.00 0.00 45.97 2.59
23 24 3.133362 TGGATACGGTTTAGTCCCATGAC 59.867 47.826 0.00 0.00 40.25 3.06
24 25 3.376636 TGGATACGGTTTAGTCCCATGA 58.623 45.455 0.00 0.00 42.51 3.07
25 26 3.830744 TGGATACGGTTTAGTCCCATG 57.169 47.619 0.00 0.00 42.51 3.66
26 27 3.433173 GCTTGGATACGGTTTAGTCCCAT 60.433 47.826 0.00 0.00 42.51 4.00
27 28 2.093341 GCTTGGATACGGTTTAGTCCCA 60.093 50.000 0.00 0.00 42.51 4.37
28 29 2.093341 TGCTTGGATACGGTTTAGTCCC 60.093 50.000 0.00 0.00 42.51 4.46
29 30 2.934553 GTGCTTGGATACGGTTTAGTCC 59.065 50.000 0.00 0.00 42.51 3.85
30 31 2.934553 GGTGCTTGGATACGGTTTAGTC 59.065 50.000 0.00 0.00 42.51 2.59
31 32 2.355412 GGGTGCTTGGATACGGTTTAGT 60.355 50.000 0.00 0.00 42.51 2.24
32 33 2.093128 AGGGTGCTTGGATACGGTTTAG 60.093 50.000 0.00 0.00 42.51 1.85
33 34 1.910671 AGGGTGCTTGGATACGGTTTA 59.089 47.619 0.00 0.00 42.51 2.01
34 35 0.696501 AGGGTGCTTGGATACGGTTT 59.303 50.000 0.00 0.00 42.51 3.27
35 36 0.252197 GAGGGTGCTTGGATACGGTT 59.748 55.000 0.00 0.00 42.51 4.44
36 37 0.617820 AGAGGGTGCTTGGATACGGT 60.618 55.000 0.00 0.00 42.51 4.83
37 38 1.410004 TAGAGGGTGCTTGGATACGG 58.590 55.000 0.00 0.00 42.51 4.02
38 39 2.365617 ACATAGAGGGTGCTTGGATACG 59.634 50.000 0.00 0.00 42.51 3.06
39 40 4.423625 AACATAGAGGGTGCTTGGATAC 57.576 45.455 0.00 0.00 0.00 2.24
40 41 5.216622 AGTAACATAGAGGGTGCTTGGATA 58.783 41.667 0.00 0.00 0.00 2.59
41 42 4.040755 AGTAACATAGAGGGTGCTTGGAT 58.959 43.478 0.00 0.00 0.00 3.41
42 43 3.450904 AGTAACATAGAGGGTGCTTGGA 58.549 45.455 0.00 0.00 0.00 3.53
43 44 3.914426 AGTAACATAGAGGGTGCTTGG 57.086 47.619 0.00 0.00 0.00 3.61
44 45 4.142600 GCAAAGTAACATAGAGGGTGCTTG 60.143 45.833 0.00 0.00 0.00 4.01
45 46 4.010349 GCAAAGTAACATAGAGGGTGCTT 58.990 43.478 0.00 0.00 0.00 3.91
46 47 3.009033 TGCAAAGTAACATAGAGGGTGCT 59.991 43.478 0.00 0.00 0.00 4.40
47 48 3.127030 GTGCAAAGTAACATAGAGGGTGC 59.873 47.826 0.00 0.00 0.00 5.01
48 49 4.579869 AGTGCAAAGTAACATAGAGGGTG 58.420 43.478 0.00 0.00 0.00 4.61
49 50 4.910458 AGTGCAAAGTAACATAGAGGGT 57.090 40.909 0.00 0.00 0.00 4.34
50 51 6.582636 TCATAGTGCAAAGTAACATAGAGGG 58.417 40.000 0.00 0.00 0.00 4.30
51 52 8.554528 CATTCATAGTGCAAAGTAACATAGAGG 58.445 37.037 0.00 0.00 0.00 3.69
52 53 9.102757 ACATTCATAGTGCAAAGTAACATAGAG 57.897 33.333 0.00 0.00 0.00 2.43
55 56 9.884636 ACTACATTCATAGTGCAAAGTAACATA 57.115 29.630 0.00 0.00 34.02 2.29
56 57 8.792830 ACTACATTCATAGTGCAAAGTAACAT 57.207 30.769 0.00 0.00 34.02 2.71
57 58 9.713713 TTACTACATTCATAGTGCAAAGTAACA 57.286 29.630 0.00 0.00 36.09 2.41
58 59 9.968743 GTTACTACATTCATAGTGCAAAGTAAC 57.031 33.333 0.00 0.00 36.09 2.50
59 60 9.938280 AGTTACTACATTCATAGTGCAAAGTAA 57.062 29.630 0.00 0.00 36.09 2.24
60 61 9.938280 AAGTTACTACATTCATAGTGCAAAGTA 57.062 29.630 0.00 0.00 36.09 2.24
61 62 8.848474 AAGTTACTACATTCATAGTGCAAAGT 57.152 30.769 0.00 0.00 36.09 2.66
63 64 9.378551 CCTAAGTTACTACATTCATAGTGCAAA 57.621 33.333 0.00 0.00 36.09 3.68
64 65 7.985184 CCCTAAGTTACTACATTCATAGTGCAA 59.015 37.037 0.00 0.00 36.09 4.08
65 66 7.125204 ACCCTAAGTTACTACATTCATAGTGCA 59.875 37.037 0.00 0.00 36.09 4.57
66 67 7.498443 ACCCTAAGTTACTACATTCATAGTGC 58.502 38.462 0.00 0.00 36.09 4.40
72 73 9.661563 CAAACATACCCTAAGTTACTACATTCA 57.338 33.333 0.00 0.00 0.00 2.57
73 74 9.106070 CCAAACATACCCTAAGTTACTACATTC 57.894 37.037 0.00 0.00 0.00 2.67
74 75 8.608598 ACCAAACATACCCTAAGTTACTACATT 58.391 33.333 0.00 0.00 0.00 2.71
75 76 8.154420 ACCAAACATACCCTAAGTTACTACAT 57.846 34.615 0.00 0.00 0.00 2.29
76 77 7.557875 ACCAAACATACCCTAAGTTACTACA 57.442 36.000 0.00 0.00 0.00 2.74
77 78 8.316946 AGAACCAAACATACCCTAAGTTACTAC 58.683 37.037 0.00 0.00 0.00 2.73
78 79 8.439964 AGAACCAAACATACCCTAAGTTACTA 57.560 34.615 0.00 0.00 0.00 1.82
79 80 7.325725 AGAACCAAACATACCCTAAGTTACT 57.674 36.000 0.00 0.00 0.00 2.24
80 81 7.767659 CCTAGAACCAAACATACCCTAAGTTAC 59.232 40.741 0.00 0.00 0.00 2.50
81 82 7.582048 GCCTAGAACCAAACATACCCTAAGTTA 60.582 40.741 0.00 0.00 0.00 2.24
82 83 6.718294 CCTAGAACCAAACATACCCTAAGTT 58.282 40.000 0.00 0.00 0.00 2.66
83 84 5.338953 GCCTAGAACCAAACATACCCTAAGT 60.339 44.000 0.00 0.00 0.00 2.24
84 85 5.123936 GCCTAGAACCAAACATACCCTAAG 58.876 45.833 0.00 0.00 0.00 2.18
85 86 4.080186 GGCCTAGAACCAAACATACCCTAA 60.080 45.833 0.00 0.00 0.00 2.69
86 87 3.457012 GGCCTAGAACCAAACATACCCTA 59.543 47.826 0.00 0.00 0.00 3.53
87 88 2.241430 GGCCTAGAACCAAACATACCCT 59.759 50.000 0.00 0.00 0.00 4.34
88 89 2.241430 AGGCCTAGAACCAAACATACCC 59.759 50.000 1.29 0.00 0.00 3.69
89 90 3.646736 AGGCCTAGAACCAAACATACC 57.353 47.619 1.29 0.00 0.00 2.73
90 91 3.128764 GCAAGGCCTAGAACCAAACATAC 59.871 47.826 5.16 0.00 0.00 2.39
91 92 3.245087 TGCAAGGCCTAGAACCAAACATA 60.245 43.478 5.16 0.00 0.00 2.29
92 93 2.171003 GCAAGGCCTAGAACCAAACAT 58.829 47.619 5.16 0.00 0.00 2.71
93 94 1.133637 TGCAAGGCCTAGAACCAAACA 60.134 47.619 5.16 0.00 0.00 2.83
94 95 1.616159 TGCAAGGCCTAGAACCAAAC 58.384 50.000 5.16 0.00 0.00 2.93
95 96 2.562298 CAATGCAAGGCCTAGAACCAAA 59.438 45.455 5.16 0.00 0.00 3.28
96 97 2.170166 CAATGCAAGGCCTAGAACCAA 58.830 47.619 5.16 0.00 0.00 3.67
97 98 1.838112 CAATGCAAGGCCTAGAACCA 58.162 50.000 5.16 0.00 0.00 3.67
98 99 0.457443 GCAATGCAAGGCCTAGAACC 59.543 55.000 5.16 0.00 0.00 3.62
99 100 0.457443 GGCAATGCAAGGCCTAGAAC 59.543 55.000 21.15 0.00 46.74 3.01
100 101 2.886382 GGCAATGCAAGGCCTAGAA 58.114 52.632 21.15 0.00 46.74 2.10
101 102 4.664062 GGCAATGCAAGGCCTAGA 57.336 55.556 21.15 0.00 46.74 2.43
106 107 0.249996 AAAGTGTGGCAATGCAAGGC 60.250 50.000 7.79 8.84 0.00 4.35
107 108 2.610232 GGTAAAGTGTGGCAATGCAAGG 60.610 50.000 7.79 0.00 0.00 3.61
108 109 2.035704 TGGTAAAGTGTGGCAATGCAAG 59.964 45.455 7.79 0.00 0.00 4.01
109 110 2.034878 TGGTAAAGTGTGGCAATGCAA 58.965 42.857 7.79 0.00 0.00 4.08
110 111 1.339610 GTGGTAAAGTGTGGCAATGCA 59.660 47.619 7.79 0.00 0.00 3.96
111 112 1.339610 TGTGGTAAAGTGTGGCAATGC 59.660 47.619 0.00 0.00 0.00 3.56
112 113 2.360483 TGTGTGGTAAAGTGTGGCAATG 59.640 45.455 0.00 0.00 0.00 2.82
113 114 2.660572 TGTGTGGTAAAGTGTGGCAAT 58.339 42.857 0.00 0.00 0.00 3.56
114 115 2.130272 TGTGTGGTAAAGTGTGGCAA 57.870 45.000 0.00 0.00 0.00 4.52
115 116 2.356665 ATGTGTGGTAAAGTGTGGCA 57.643 45.000 0.00 0.00 0.00 4.92
116 117 3.726291 AAATGTGTGGTAAAGTGTGGC 57.274 42.857 0.00 0.00 0.00 5.01
117 118 4.269844 GCAAAAATGTGTGGTAAAGTGTGG 59.730 41.667 0.00 0.00 0.00 4.17
118 119 4.269844 GGCAAAAATGTGTGGTAAAGTGTG 59.730 41.667 0.00 0.00 0.00 3.82
119 120 4.081420 TGGCAAAAATGTGTGGTAAAGTGT 60.081 37.500 0.00 0.00 0.00 3.55
120 121 4.437239 TGGCAAAAATGTGTGGTAAAGTG 58.563 39.130 0.00 0.00 0.00 3.16
121 122 4.744795 TGGCAAAAATGTGTGGTAAAGT 57.255 36.364 0.00 0.00 0.00 2.66
122 123 5.115480 ACTTGGCAAAAATGTGTGGTAAAG 58.885 37.500 0.00 0.00 0.00 1.85
123 124 5.091261 ACTTGGCAAAAATGTGTGGTAAA 57.909 34.783 0.00 0.00 0.00 2.01
124 125 4.744795 ACTTGGCAAAAATGTGTGGTAA 57.255 36.364 0.00 0.00 0.00 2.85
125 126 4.744795 AACTTGGCAAAAATGTGTGGTA 57.255 36.364 0.00 0.00 0.00 3.25
126 127 3.625649 AACTTGGCAAAAATGTGTGGT 57.374 38.095 0.00 0.00 0.00 4.16
127 128 3.487209 GCAAACTTGGCAAAAATGTGTGG 60.487 43.478 0.00 0.00 0.00 4.17
128 129 3.682921 GCAAACTTGGCAAAAATGTGTG 58.317 40.909 0.00 2.22 0.00 3.82
140 141 4.825085 TGAACTAACCTTAGGCAAACTTGG 59.175 41.667 0.00 0.00 35.08 3.61
141 142 6.206634 TGATGAACTAACCTTAGGCAAACTTG 59.793 38.462 0.00 0.00 35.08 3.16
142 143 6.303839 TGATGAACTAACCTTAGGCAAACTT 58.696 36.000 0.00 0.00 35.08 2.66
143 144 5.876357 TGATGAACTAACCTTAGGCAAACT 58.124 37.500 0.00 0.00 35.08 2.66
144 145 6.569179 TTGATGAACTAACCTTAGGCAAAC 57.431 37.500 0.00 0.00 35.08 2.93
145 146 7.589958 TTTTGATGAACTAACCTTAGGCAAA 57.410 32.000 0.00 0.00 35.08 3.68
146 147 7.450014 TCATTTTGATGAACTAACCTTAGGCAA 59.550 33.333 0.00 0.00 35.08 4.52
147 148 6.945435 TCATTTTGATGAACTAACCTTAGGCA 59.055 34.615 0.00 0.00 35.08 4.75
148 149 7.336931 TCTCATTTTGATGAACTAACCTTAGGC 59.663 37.037 0.00 0.00 35.08 3.93
149 150 8.792830 TCTCATTTTGATGAACTAACCTTAGG 57.207 34.615 0.00 0.00 35.08 2.69
150 151 9.442047 ACTCTCATTTTGATGAACTAACCTTAG 57.558 33.333 0.00 0.00 36.82 2.18
151 152 9.436957 GACTCTCATTTTGATGAACTAACCTTA 57.563 33.333 0.00 0.00 0.00 2.69
152 153 7.939039 TGACTCTCATTTTGATGAACTAACCTT 59.061 33.333 0.00 0.00 0.00 3.50
153 154 7.389053 GTGACTCTCATTTTGATGAACTAACCT 59.611 37.037 0.00 0.00 0.00 3.50
154 155 7.173218 TGTGACTCTCATTTTGATGAACTAACC 59.827 37.037 0.00 0.00 0.00 2.85
155 156 8.087982 TGTGACTCTCATTTTGATGAACTAAC 57.912 34.615 0.00 0.00 0.00 2.34
156 157 8.675705 TTGTGACTCTCATTTTGATGAACTAA 57.324 30.769 0.00 0.00 0.00 2.24
157 158 7.933577 ACTTGTGACTCTCATTTTGATGAACTA 59.066 33.333 0.00 0.00 0.00 2.24
158 159 6.769822 ACTTGTGACTCTCATTTTGATGAACT 59.230 34.615 0.00 0.00 0.00 3.01
159 160 6.963796 ACTTGTGACTCTCATTTTGATGAAC 58.036 36.000 0.00 0.00 0.00 3.18
160 161 7.420002 CAACTTGTGACTCTCATTTTGATGAA 58.580 34.615 0.00 0.00 0.00 2.57
161 162 6.016860 CCAACTTGTGACTCTCATTTTGATGA 60.017 38.462 0.00 0.00 0.00 2.92
162 163 6.147581 CCAACTTGTGACTCTCATTTTGATG 58.852 40.000 0.00 0.00 0.00 3.07
163 164 5.278660 GCCAACTTGTGACTCTCATTTTGAT 60.279 40.000 0.00 0.00 0.00 2.57
164 165 4.036734 GCCAACTTGTGACTCTCATTTTGA 59.963 41.667 0.00 0.00 0.00 2.69
165 166 4.202040 TGCCAACTTGTGACTCTCATTTTG 60.202 41.667 0.00 0.00 0.00 2.44
166 167 3.953612 TGCCAACTTGTGACTCTCATTTT 59.046 39.130 0.00 0.00 0.00 1.82
167 168 3.554934 TGCCAACTTGTGACTCTCATTT 58.445 40.909 0.00 0.00 0.00 2.32
168 169 3.213206 TGCCAACTTGTGACTCTCATT 57.787 42.857 0.00 0.00 0.00 2.57
169 170 2.936919 TGCCAACTTGTGACTCTCAT 57.063 45.000 0.00 0.00 0.00 2.90
170 171 2.564771 CTTGCCAACTTGTGACTCTCA 58.435 47.619 0.00 0.00 0.00 3.27
171 172 1.265365 GCTTGCCAACTTGTGACTCTC 59.735 52.381 0.00 0.00 0.00 3.20
172 173 1.312815 GCTTGCCAACTTGTGACTCT 58.687 50.000 0.00 0.00 0.00 3.24
173 174 0.312102 GGCTTGCCAACTTGTGACTC 59.688 55.000 6.79 0.00 0.00 3.36
174 175 0.106519 AGGCTTGCCAACTTGTGACT 60.107 50.000 14.54 0.00 0.00 3.41
175 176 1.604604 TAGGCTTGCCAACTTGTGAC 58.395 50.000 14.54 0.00 0.00 3.67
176 177 2.158682 TCTTAGGCTTGCCAACTTGTGA 60.159 45.455 14.54 0.00 0.00 3.58
177 178 2.227388 CTCTTAGGCTTGCCAACTTGTG 59.773 50.000 14.54 0.00 0.00 3.33
178 179 2.106511 TCTCTTAGGCTTGCCAACTTGT 59.893 45.455 14.54 0.00 0.00 3.16
179 180 2.783135 TCTCTTAGGCTTGCCAACTTG 58.217 47.619 14.54 1.55 0.00 3.16
180 181 3.508845 TTCTCTTAGGCTTGCCAACTT 57.491 42.857 14.54 0.00 0.00 2.66
181 182 3.265479 AGATTCTCTTAGGCTTGCCAACT 59.735 43.478 14.54 0.00 0.00 3.16
182 183 3.615155 AGATTCTCTTAGGCTTGCCAAC 58.385 45.455 14.54 0.00 0.00 3.77
183 184 4.012374 CAAGATTCTCTTAGGCTTGCCAA 58.988 43.478 14.54 5.54 33.78 4.52
184 185 3.614092 CAAGATTCTCTTAGGCTTGCCA 58.386 45.455 14.54 0.00 33.78 4.92
187 188 3.376546 GTGGCAAGATTCTCTTAGGCTTG 59.623 47.826 0.00 0.00 33.78 4.01
188 189 3.009473 TGTGGCAAGATTCTCTTAGGCTT 59.991 43.478 0.00 0.00 33.78 4.35
189 190 2.573462 TGTGGCAAGATTCTCTTAGGCT 59.427 45.455 0.00 0.00 33.78 4.58
190 191 2.991250 TGTGGCAAGATTCTCTTAGGC 58.009 47.619 0.00 0.00 33.78 3.93
191 192 6.521151 AAAATGTGGCAAGATTCTCTTAGG 57.479 37.500 0.00 0.00 33.78 2.69
212 213 3.244009 CCCACATGGCATACACACAAAAA 60.244 43.478 0.00 0.00 0.00 1.94
213 214 2.298446 CCCACATGGCATACACACAAAA 59.702 45.455 0.00 0.00 0.00 2.44
214 215 1.891811 CCCACATGGCATACACACAAA 59.108 47.619 0.00 0.00 0.00 2.83
215 216 1.543607 CCCACATGGCATACACACAA 58.456 50.000 0.00 0.00 0.00 3.33
216 217 0.323269 CCCCACATGGCATACACACA 60.323 55.000 0.00 0.00 0.00 3.72
217 218 2.492418 CCCCACATGGCATACACAC 58.508 57.895 0.00 0.00 0.00 3.82
226 227 2.308722 ACACTAGGGCCCCACATGG 61.309 63.158 21.43 3.94 0.00 3.66
227 228 1.077501 CACACTAGGGCCCCACATG 60.078 63.158 21.43 14.87 0.00 3.21
228 229 2.308722 CCACACTAGGGCCCCACAT 61.309 63.158 21.43 1.11 0.00 3.21
229 230 2.933287 CCACACTAGGGCCCCACA 60.933 66.667 21.43 2.52 0.00 4.17
230 231 4.426313 GCCACACTAGGGCCCCAC 62.426 72.222 21.43 0.00 45.87 4.61
236 237 0.618458 TTAGGCAAGCCACACTAGGG 59.382 55.000 14.40 0.00 38.92 3.53
237 238 1.407437 CCTTAGGCAAGCCACACTAGG 60.407 57.143 14.40 8.00 38.92 3.02
238 239 1.279271 ACCTTAGGCAAGCCACACTAG 59.721 52.381 14.40 2.88 38.92 2.57
239 240 1.003118 CACCTTAGGCAAGCCACACTA 59.997 52.381 14.40 0.00 38.92 2.74
240 241 0.250901 CACCTTAGGCAAGCCACACT 60.251 55.000 14.40 0.00 38.92 3.55
241 242 0.537371 ACACCTTAGGCAAGCCACAC 60.537 55.000 14.40 0.00 38.92 3.82
242 243 0.537143 CACACCTTAGGCAAGCCACA 60.537 55.000 14.40 0.00 38.92 4.17
243 244 1.244019 CCACACCTTAGGCAAGCCAC 61.244 60.000 14.40 0.00 38.92 5.01
244 245 1.074775 CCACACCTTAGGCAAGCCA 59.925 57.895 14.40 0.00 38.92 4.75
245 246 4.002797 CCACACCTTAGGCAAGCC 57.997 61.111 2.02 2.02 0.00 4.35
251 252 1.202879 TGGTTCAAGCCACACCTTAGG 60.203 52.381 0.00 0.00 32.81 2.69
252 253 2.270352 TGGTTCAAGCCACACCTTAG 57.730 50.000 0.00 0.00 32.81 2.18
253 254 2.691011 GTTTGGTTCAAGCCACACCTTA 59.309 45.455 0.00 0.00 38.42 2.69
254 255 1.480545 GTTTGGTTCAAGCCACACCTT 59.519 47.619 0.00 0.00 38.42 3.50
255 256 1.111277 GTTTGGTTCAAGCCACACCT 58.889 50.000 0.00 0.00 38.42 4.00
256 257 0.820871 TGTTTGGTTCAAGCCACACC 59.179 50.000 0.54 0.00 38.17 4.16
257 258 1.476488 AGTGTTTGGTTCAAGCCACAC 59.524 47.619 10.00 10.00 39.10 3.82
258 259 1.748493 GAGTGTTTGGTTCAAGCCACA 59.252 47.619 11.95 0.00 38.42 4.17
259 260 1.748493 TGAGTGTTTGGTTCAAGCCAC 59.252 47.619 0.00 0.00 38.42 5.01
260 261 1.748493 GTGAGTGTTTGGTTCAAGCCA 59.252 47.619 0.00 0.00 36.62 4.75
261 262 1.067060 GGTGAGTGTTTGGTTCAAGCC 59.933 52.381 0.00 0.00 0.00 4.35
262 263 2.024414 AGGTGAGTGTTTGGTTCAAGC 58.976 47.619 0.00 0.00 0.00 4.01
263 264 5.828299 TTTAGGTGAGTGTTTGGTTCAAG 57.172 39.130 0.00 0.00 0.00 3.02
264 265 6.783708 AATTTAGGTGAGTGTTTGGTTCAA 57.216 33.333 0.00 0.00 0.00 2.69
265 266 7.057894 ACTAATTTAGGTGAGTGTTTGGTTCA 58.942 34.615 8.26 0.00 0.00 3.18
266 267 7.227910 TGACTAATTTAGGTGAGTGTTTGGTTC 59.772 37.037 8.26 0.00 0.00 3.62
267 268 7.057894 TGACTAATTTAGGTGAGTGTTTGGTT 58.942 34.615 8.26 0.00 0.00 3.67
268 269 6.597562 TGACTAATTTAGGTGAGTGTTTGGT 58.402 36.000 8.26 0.00 0.00 3.67
269 270 7.504924 TTGACTAATTTAGGTGAGTGTTTGG 57.495 36.000 8.26 0.00 0.00 3.28
270 271 8.621286 AGTTTGACTAATTTAGGTGAGTGTTTG 58.379 33.333 8.26 0.00 0.00 2.93
271 272 8.747538 AGTTTGACTAATTTAGGTGAGTGTTT 57.252 30.769 8.26 0.00 0.00 2.83
272 273 8.621286 CAAGTTTGACTAATTTAGGTGAGTGTT 58.379 33.333 8.26 0.00 0.00 3.32
273 274 7.255139 GCAAGTTTGACTAATTTAGGTGAGTGT 60.255 37.037 8.26 0.00 0.00 3.55
274 275 7.078228 GCAAGTTTGACTAATTTAGGTGAGTG 58.922 38.462 8.26 0.00 0.00 3.51
275 276 6.206829 GGCAAGTTTGACTAATTTAGGTGAGT 59.793 38.462 8.26 0.00 31.99 3.41
276 277 6.431234 AGGCAAGTTTGACTAATTTAGGTGAG 59.569 38.462 8.26 0.00 46.90 3.51
277 278 6.303839 AGGCAAGTTTGACTAATTTAGGTGA 58.696 36.000 8.26 0.00 46.90 4.02
278 279 6.575162 AGGCAAGTTTGACTAATTTAGGTG 57.425 37.500 8.26 0.00 46.90 4.00
287 288 5.801380 CCTAAGGTTAGGCAAGTTTGACTA 58.199 41.667 3.32 3.32 46.90 2.59
300 301 2.039879 AGGTTGCCACACCTAAGGTTAG 59.960 50.000 0.00 0.00 46.14 2.34
301 302 2.059490 AGGTTGCCACACCTAAGGTTA 58.941 47.619 0.00 0.00 46.14 2.85
302 303 0.850784 AGGTTGCCACACCTAAGGTT 59.149 50.000 0.00 0.00 46.14 3.50
303 304 2.551996 AGGTTGCCACACCTAAGGT 58.448 52.632 0.00 0.00 46.14 3.50
309 310 1.965754 TTGCCAAAGGTTGCCACACC 61.966 55.000 0.00 0.00 37.04 4.16
310 311 0.107945 TTTGCCAAAGGTTGCCACAC 60.108 50.000 0.00 0.00 0.00 3.82
311 312 0.177604 CTTTGCCAAAGGTTGCCACA 59.822 50.000 9.37 0.00 34.85 4.17
312 313 0.177836 ACTTTGCCAAAGGTTGCCAC 59.822 50.000 20.55 0.00 42.82 5.01
313 314 0.908198 AACTTTGCCAAAGGTTGCCA 59.092 45.000 20.55 0.00 42.82 4.92
314 315 2.102420 ACTAACTTTGCCAAAGGTTGCC 59.898 45.455 20.55 0.00 42.82 4.52
315 316 3.181480 TGACTAACTTTGCCAAAGGTTGC 60.181 43.478 20.55 11.68 42.82 4.17
316 317 4.142271 TGTGACTAACTTTGCCAAAGGTTG 60.142 41.667 20.55 17.14 42.82 3.77
317 318 4.020543 TGTGACTAACTTTGCCAAAGGTT 58.979 39.130 20.55 13.99 42.82 3.50
318 319 3.626930 TGTGACTAACTTTGCCAAAGGT 58.373 40.909 20.55 17.05 42.82 3.50
319 320 4.647424 TTGTGACTAACTTTGCCAAAGG 57.353 40.909 20.55 6.29 42.82 3.11
320 321 4.803613 GGTTTGTGACTAACTTTGCCAAAG 59.196 41.667 15.47 15.47 44.10 2.77
321 322 4.220821 TGGTTTGTGACTAACTTTGCCAAA 59.779 37.500 9.55 0.00 0.00 3.28
322 323 3.764434 TGGTTTGTGACTAACTTTGCCAA 59.236 39.130 9.55 0.00 0.00 4.52
323 324 3.357203 TGGTTTGTGACTAACTTTGCCA 58.643 40.909 9.55 0.00 0.00 4.92
324 325 4.379339 TTGGTTTGTGACTAACTTTGCC 57.621 40.909 9.55 0.00 0.00 4.52
325 326 5.164954 TGTTTGGTTTGTGACTAACTTTGC 58.835 37.500 9.55 0.62 0.00 3.68
326 327 7.010091 GGATTGTTTGGTTTGTGACTAACTTTG 59.990 37.037 9.55 0.00 0.00 2.77
327 328 7.039270 GGATTGTTTGGTTTGTGACTAACTTT 58.961 34.615 9.55 0.00 0.00 2.66
328 329 6.406512 GGGATTGTTTGGTTTGTGACTAACTT 60.407 38.462 9.55 0.00 0.00 2.66
329 330 5.068591 GGGATTGTTTGGTTTGTGACTAACT 59.931 40.000 9.55 0.00 0.00 2.24
330 331 5.068591 AGGGATTGTTTGGTTTGTGACTAAC 59.931 40.000 1.25 1.25 0.00 2.34
331 332 5.205056 AGGGATTGTTTGGTTTGTGACTAA 58.795 37.500 0.00 0.00 0.00 2.24
332 333 4.798882 AGGGATTGTTTGGTTTGTGACTA 58.201 39.130 0.00 0.00 0.00 2.59
333 334 3.642141 AGGGATTGTTTGGTTTGTGACT 58.358 40.909 0.00 0.00 0.00 3.41
334 335 4.400529 AAGGGATTGTTTGGTTTGTGAC 57.599 40.909 0.00 0.00 0.00 3.67
335 336 5.300792 GTCTAAGGGATTGTTTGGTTTGTGA 59.699 40.000 0.00 0.00 0.00 3.58
336 337 5.301805 AGTCTAAGGGATTGTTTGGTTTGTG 59.698 40.000 0.00 0.00 0.00 3.33
337 338 5.454966 AGTCTAAGGGATTGTTTGGTTTGT 58.545 37.500 0.00 0.00 0.00 2.83
338 339 6.715264 ACTAGTCTAAGGGATTGTTTGGTTTG 59.285 38.462 0.00 0.00 0.00 2.93
339 340 6.715264 CACTAGTCTAAGGGATTGTTTGGTTT 59.285 38.462 0.00 0.00 0.00 3.27
340 341 6.183361 ACACTAGTCTAAGGGATTGTTTGGTT 60.183 38.462 0.00 0.00 0.00 3.67
341 342 5.309806 ACACTAGTCTAAGGGATTGTTTGGT 59.690 40.000 0.00 0.00 0.00 3.67
342 343 5.805728 ACACTAGTCTAAGGGATTGTTTGG 58.194 41.667 0.00 0.00 0.00 3.28
343 344 6.464222 TGACACTAGTCTAAGGGATTGTTTG 58.536 40.000 0.00 0.00 45.20 2.93
344 345 6.681729 TGACACTAGTCTAAGGGATTGTTT 57.318 37.500 0.00 0.00 45.20 2.83
345 346 6.875972 ATGACACTAGTCTAAGGGATTGTT 57.124 37.500 0.00 0.00 45.20 2.83
346 347 7.472100 GCATATGACACTAGTCTAAGGGATTGT 60.472 40.741 6.97 0.00 45.20 2.71
347 348 6.870965 GCATATGACACTAGTCTAAGGGATTG 59.129 42.308 6.97 0.00 45.20 2.67
348 349 6.554982 TGCATATGACACTAGTCTAAGGGATT 59.445 38.462 6.97 0.00 45.20 3.01
349 350 6.077993 TGCATATGACACTAGTCTAAGGGAT 58.922 40.000 6.97 0.00 45.20 3.85
350 351 5.454966 TGCATATGACACTAGTCTAAGGGA 58.545 41.667 6.97 0.00 45.20 4.20
351 352 5.791336 TGCATATGACACTAGTCTAAGGG 57.209 43.478 6.97 0.00 45.20 3.95
352 353 6.986250 TCATGCATATGACACTAGTCTAAGG 58.014 40.000 6.97 0.00 45.20 2.69
369 370 9.712305 GGAGTAATTTATACTAGTGTCATGCAT 57.288 33.333 5.39 0.00 0.00 3.96
370 371 8.700973 TGGAGTAATTTATACTAGTGTCATGCA 58.299 33.333 5.39 0.00 0.00 3.96
371 372 8.979574 GTGGAGTAATTTATACTAGTGTCATGC 58.020 37.037 5.39 0.00 0.00 4.06
374 375 9.251440 AGTGTGGAGTAATTTATACTAGTGTCA 57.749 33.333 5.39 0.00 0.00 3.58
383 384 9.929180 GCTGATCATAGTGTGGAGTAATTTATA 57.071 33.333 0.00 0.00 0.00 0.98
384 385 7.880195 GGCTGATCATAGTGTGGAGTAATTTAT 59.120 37.037 0.00 0.00 0.00 1.40
385 386 7.071196 AGGCTGATCATAGTGTGGAGTAATTTA 59.929 37.037 0.00 0.00 0.00 1.40
386 387 6.058183 GGCTGATCATAGTGTGGAGTAATTT 58.942 40.000 0.00 0.00 0.00 1.82
387 388 5.367937 AGGCTGATCATAGTGTGGAGTAATT 59.632 40.000 0.00 0.00 0.00 1.40
388 389 4.904251 AGGCTGATCATAGTGTGGAGTAAT 59.096 41.667 0.00 0.00 0.00 1.89
389 390 4.290093 AGGCTGATCATAGTGTGGAGTAA 58.710 43.478 0.00 0.00 0.00 2.24
390 391 3.916035 AGGCTGATCATAGTGTGGAGTA 58.084 45.455 0.00 0.00 0.00 2.59
391 392 2.756907 AGGCTGATCATAGTGTGGAGT 58.243 47.619 0.00 0.00 0.00 3.85
392 393 3.834489 AAGGCTGATCATAGTGTGGAG 57.166 47.619 0.00 0.00 0.00 3.86
393 394 4.290093 ACTAAGGCTGATCATAGTGTGGA 58.710 43.478 6.02 0.00 0.00 4.02
394 395 4.679373 ACTAAGGCTGATCATAGTGTGG 57.321 45.455 6.02 0.00 0.00 4.17
395 396 5.053145 GGAACTAAGGCTGATCATAGTGTG 58.947 45.833 7.34 0.00 0.00 3.82
396 397 4.965532 AGGAACTAAGGCTGATCATAGTGT 59.034 41.667 7.34 0.14 36.02 3.55
397 398 5.543507 AGGAACTAAGGCTGATCATAGTG 57.456 43.478 7.34 0.00 36.02 2.74
398 399 6.841755 AGTAAGGAACTAAGGCTGATCATAGT 59.158 38.462 0.00 0.00 38.49 2.12
399 400 7.151308 CAGTAAGGAACTAAGGCTGATCATAG 58.849 42.308 0.00 0.00 38.49 2.23
400 401 6.463049 GCAGTAAGGAACTAAGGCTGATCATA 60.463 42.308 0.00 0.00 38.49 2.15
401 402 5.686124 GCAGTAAGGAACTAAGGCTGATCAT 60.686 44.000 0.00 0.00 38.49 2.45
402 403 4.383118 GCAGTAAGGAACTAAGGCTGATCA 60.383 45.833 0.00 0.00 38.49 2.92
403 404 4.123506 GCAGTAAGGAACTAAGGCTGATC 58.876 47.826 0.00 0.00 38.49 2.92
404 405 3.430929 CGCAGTAAGGAACTAAGGCTGAT 60.431 47.826 0.00 0.00 38.49 2.90
405 406 2.094182 CGCAGTAAGGAACTAAGGCTGA 60.094 50.000 0.00 0.00 38.49 4.26
406 407 2.271800 CGCAGTAAGGAACTAAGGCTG 58.728 52.381 0.00 0.00 38.49 4.85
407 408 1.900486 ACGCAGTAAGGAACTAAGGCT 59.100 47.619 0.00 0.00 41.94 4.58
408 409 2.381725 ACGCAGTAAGGAACTAAGGC 57.618 50.000 0.00 0.00 41.94 4.35
430 431 1.018148 CTAGCGACCGAGTCTGTGAT 58.982 55.000 0.00 0.00 0.00 3.06
431 432 0.036671 TCTAGCGACCGAGTCTGTGA 60.037 55.000 0.00 0.00 0.00 3.58
432 433 1.003331 GATCTAGCGACCGAGTCTGTG 60.003 57.143 0.00 0.00 0.00 3.66
433 434 1.301423 GATCTAGCGACCGAGTCTGT 58.699 55.000 0.00 0.00 0.00 3.41
434 435 0.233590 CGATCTAGCGACCGAGTCTG 59.766 60.000 0.00 0.00 0.00 3.51
495 497 1.733402 CTTTTGCGTCCCTGCCACAA 61.733 55.000 0.00 0.00 0.00 3.33
522 524 6.158598 ACATGTTTGGTTGCATTCTACATTC 58.841 36.000 0.00 0.00 0.00 2.67
524 526 5.726980 ACATGTTTGGTTGCATTCTACAT 57.273 34.783 0.00 0.00 0.00 2.29
552 554 2.479560 GGGAAAAGGCGCATATCACAAC 60.480 50.000 10.83 0.00 0.00 3.32
557 559 3.733443 AAATGGGAAAAGGCGCATATC 57.267 42.857 10.83 4.24 40.08 1.63
558 560 3.795877 CAAAATGGGAAAAGGCGCATAT 58.204 40.909 10.83 0.00 40.08 1.78
574 576 4.766891 AGCACATACAGTACTTGGCAAAAT 59.233 37.500 0.00 0.00 0.00 1.82
599 602 7.732025 TGAGTTGATACAGTACTTTTTGAGGA 58.268 34.615 0.00 0.00 0.00 3.71
643 649 1.473965 CCATACACTTCTCCAGCGCAT 60.474 52.381 11.47 0.00 0.00 4.73
647 653 2.359900 CAACCCATACACTTCTCCAGC 58.640 52.381 0.00 0.00 0.00 4.85
648 654 2.359900 GCAACCCATACACTTCTCCAG 58.640 52.381 0.00 0.00 0.00 3.86
754 821 3.195591 ATCTTCGGCGTCGGATCCG 62.196 63.158 28.62 28.62 46.52 4.18
810 877 2.206576 AAAGGCAGGCTACAGAAAGG 57.793 50.000 0.00 0.00 0.00 3.11
873 940 1.259142 TTCGGTTGGGGTCGCATAGA 61.259 55.000 0.00 0.00 0.00 1.98
883 950 4.278513 TGGCCTGGTTCGGTTGGG 62.279 66.667 3.32 0.00 0.00 4.12
903 970 3.036084 CACACAGTGCGACCCGAC 61.036 66.667 0.00 0.00 0.00 4.79
904 971 3.220658 TCACACAGTGCGACCCGA 61.221 61.111 0.00 0.00 32.98 5.14
905 972 3.036084 GTCACACAGTGCGACCCG 61.036 66.667 10.20 0.00 32.98 5.28
906 973 3.036084 CGTCACACAGTGCGACCC 61.036 66.667 14.76 0.00 36.03 4.46
907 974 2.016704 CTCGTCACACAGTGCGACC 61.017 63.158 14.76 0.00 37.25 4.79
911 978 1.949133 TTCGCTCGTCACACAGTGC 60.949 57.895 0.00 0.00 32.98 4.40
913 980 1.299926 GGTTCGCTCGTCACACAGT 60.300 57.895 0.00 0.00 0.00 3.55
914 981 1.278172 CTGGTTCGCTCGTCACACAG 61.278 60.000 0.00 0.00 0.00 3.66
915 982 1.299850 CTGGTTCGCTCGTCACACA 60.300 57.895 0.00 0.00 0.00 3.72
916 983 2.022129 CCTGGTTCGCTCGTCACAC 61.022 63.158 0.00 0.00 0.00 3.82
917 984 2.338620 CCTGGTTCGCTCGTCACA 59.661 61.111 0.00 0.00 0.00 3.58
918 985 2.432628 CCCTGGTTCGCTCGTCAC 60.433 66.667 0.00 0.00 0.00 3.67
919 986 3.691342 CCCCTGGTTCGCTCGTCA 61.691 66.667 0.00 0.00 0.00 4.35
982 1104 4.271816 CTGATCTCCGACGCCCCG 62.272 72.222 0.00 0.00 0.00 5.73
983 1105 2.203771 ATCTGATCTCCGACGCCCC 61.204 63.158 0.00 0.00 0.00 5.80
984 1106 1.006805 CATCTGATCTCCGACGCCC 60.007 63.158 0.00 0.00 0.00 6.13
985 1107 0.318275 GACATCTGATCTCCGACGCC 60.318 60.000 0.00 0.00 0.00 5.68
986 1108 0.658829 CGACATCTGATCTCCGACGC 60.659 60.000 0.00 0.00 0.00 5.19
987 1109 0.658829 GCGACATCTGATCTCCGACG 60.659 60.000 0.00 0.00 0.00 5.12
988 1110 0.382158 TGCGACATCTGATCTCCGAC 59.618 55.000 0.00 1.21 0.00 4.79
989 1111 0.665298 CTGCGACATCTGATCTCCGA 59.335 55.000 0.00 0.00 0.00 4.55
990 1112 0.665298 TCTGCGACATCTGATCTCCG 59.335 55.000 0.00 0.00 0.00 4.63
991 1113 2.741612 CTTCTGCGACATCTGATCTCC 58.258 52.381 0.00 0.00 0.00 3.71
992 1114 2.126467 GCTTCTGCGACATCTGATCTC 58.874 52.381 0.00 0.00 0.00 2.75
993 1115 2.222007 GCTTCTGCGACATCTGATCT 57.778 50.000 0.00 0.00 0.00 2.75
1162 1284 2.103143 CAATCGAGAGCGCGAGGT 59.897 61.111 12.10 0.00 44.26 3.85
1182 1308 0.391263 AATCAGCGAAACCGAGGGAC 60.391 55.000 0.00 0.00 0.00 4.46
1208 1338 1.971695 GACCCTGCCCAAACGAAGG 60.972 63.158 0.00 0.00 0.00 3.46
1209 1339 0.609131 ATGACCCTGCCCAAACGAAG 60.609 55.000 0.00 0.00 0.00 3.79
1212 1342 1.303236 TGATGACCCTGCCCAAACG 60.303 57.895 0.00 0.00 0.00 3.60
1214 1344 1.303236 CGTGATGACCCTGCCCAAA 60.303 57.895 0.00 0.00 0.00 3.28
1307 1450 4.135153 CGAGGCACAGGAGACGGG 62.135 72.222 0.00 0.00 0.00 5.28
1337 1480 2.363975 CGAGGATTTGGGACGGGGA 61.364 63.158 0.00 0.00 0.00 4.81
1341 1484 1.084289 GGAAACGAGGATTTGGGACG 58.916 55.000 0.00 0.00 0.00 4.79
1342 1485 2.491675 AGGAAACGAGGATTTGGGAC 57.508 50.000 0.00 0.00 0.00 4.46
1343 1486 2.290705 GGAAGGAAACGAGGATTTGGGA 60.291 50.000 0.00 0.00 0.00 4.37
1347 1490 1.003233 AGCGGAAGGAAACGAGGATTT 59.997 47.619 0.00 0.00 0.00 2.17
1364 1507 2.943865 CGAATTTGTCGTGATACAGCG 58.056 47.619 0.00 0.00 45.09 5.18
1390 1533 0.799917 CAGATCAGACGGAGCACACG 60.800 60.000 0.00 0.00 33.23 4.49
1391 1534 1.080995 GCAGATCAGACGGAGCACAC 61.081 60.000 0.00 0.00 33.23 3.82
1404 1547 3.119316 TGAAAAGAGAGGAGACGCAGATC 60.119 47.826 0.00 0.00 0.00 2.75
1418 1561 3.168292 AGGCCCAAGGAAATGAAAAGAG 58.832 45.455 0.00 0.00 0.00 2.85
1487 1660 4.023707 GCGATGTAGAAAATGGATTCCTGG 60.024 45.833 3.95 0.00 0.00 4.45
1530 1705 2.165234 TCTGCGGAGTCTCTGATTCTTG 59.835 50.000 13.17 0.00 0.00 3.02
1541 1716 0.175073 ATTTACGGGTCTGCGGAGTC 59.825 55.000 3.10 0.00 0.00 3.36
1555 1730 6.827586 TGTAATCCCACAGTCCAAATTTAC 57.172 37.500 0.00 0.00 0.00 2.01
1556 1731 6.072397 CGTTGTAATCCCACAGTCCAAATTTA 60.072 38.462 0.00 0.00 0.00 1.40
1607 1782 3.364889 TCTACTCAATATCAACCGCCG 57.635 47.619 0.00 0.00 0.00 6.46
1615 1790 7.812191 AGTGCGATTTCAGATCTACTCAATATC 59.188 37.037 0.00 0.00 0.00 1.63
1668 1843 3.253188 GCTCCTCACTACTCTGCAGATAG 59.747 52.174 18.63 20.64 0.00 2.08
1690 1866 2.427506 GGGAGAAACAGCTTGTGTAGG 58.572 52.381 0.00 0.00 39.03 3.18
1694 1871 2.646121 GGGGGAGAAACAGCTTGTG 58.354 57.895 0.00 0.00 0.00 3.33
1733 1910 7.951530 AAGAAGCACATCCTACAAAATTTTG 57.048 32.000 25.73 25.73 43.62 2.44
1742 1919 6.094048 TGCAGATTAAAAGAAGCACATCCTAC 59.906 38.462 0.00 0.00 0.00 3.18
1776 1971 3.966979 TGTCACCCAGCACATCATAATT 58.033 40.909 0.00 0.00 0.00 1.40
1835 2030 3.538591 TCCTGACAGCAGCAATATTGAG 58.461 45.455 19.73 11.25 40.91 3.02
1871 2066 6.265196 TCAAAACTGATGCAAATACAGGAACT 59.735 34.615 14.55 0.00 43.88 3.01
1885 2080 5.772825 TTCCTTGGTCTTCAAAACTGATG 57.227 39.130 0.00 0.00 34.56 3.07
1888 2083 6.490040 TCCTAATTCCTTGGTCTTCAAAACTG 59.510 38.462 0.00 0.00 34.56 3.16
1919 2117 9.606631 ACTACAATATCTCTTGGTGAAGATTTC 57.393 33.333 0.00 0.00 37.58 2.17
1948 2146 8.306313 ACCCCCTCTTAAATTAATTGATGAAC 57.694 34.615 0.39 0.00 0.00 3.18
1989 2196 6.500684 TGACTTCTAAAAGGCATGATTGAC 57.499 37.500 0.00 0.00 45.85 3.18
2029 2238 9.737427 CTGAATGTAGAACAATACAGTACTAGG 57.263 37.037 0.00 0.00 38.96 3.02
2179 2482 3.380004 ACGAAAACATGGCTGAAAACAGA 59.620 39.130 0.00 0.00 0.00 3.41
2313 2616 3.715628 ACTTGTCAAAAGGTGTCATGC 57.284 42.857 0.00 0.00 0.00 4.06
2314 2617 6.966435 AAAAACTTGTCAAAAGGTGTCATG 57.034 33.333 0.00 0.00 0.00 3.07
2409 2724 6.021468 GCAAATTTTTCGATGTAGATGGAACG 60.021 38.462 0.00 0.00 0.00 3.95
2448 2763 7.603180 AAAAATTGGAAGAGAAAGCCTAGTT 57.397 32.000 0.00 0.00 0.00 2.24
2472 2787 1.351017 CCTTCAACCTTGGAGCCAGTA 59.649 52.381 0.00 0.00 32.21 2.74
2538 3062 3.329520 ACTCCTTGCCCATTACTACAACA 59.670 43.478 0.00 0.00 0.00 3.33
2553 3077 2.191128 CCTTCAACAGGGACTCCTTG 57.809 55.000 5.64 5.64 42.67 3.61
2630 3161 8.786826 AACGATGTTATTATTGAACTCCTGAA 57.213 30.769 0.00 0.00 0.00 3.02
2891 3434 7.383300 GCAAGAAACTAATGACAATTGAAAGCT 59.617 33.333 13.59 0.00 0.00 3.74
2904 3447 3.193479 GGAAGGGGTGCAAGAAACTAATG 59.807 47.826 0.00 0.00 0.00 1.90
2908 3451 0.853530 AGGAAGGGGTGCAAGAAACT 59.146 50.000 0.00 0.00 0.00 2.66
2954 3535 7.123247 AGTTGTCAATTTAAAGGATGCTATGCT 59.877 33.333 0.00 0.00 0.00 3.79
2957 3538 7.093814 TGCAGTTGTCAATTTAAAGGATGCTAT 60.094 33.333 12.97 0.00 0.00 2.97
2958 3539 6.208402 TGCAGTTGTCAATTTAAAGGATGCTA 59.792 34.615 12.97 3.20 0.00 3.49
3366 3979 1.117150 GGGTGCATAGTACCTTCCGA 58.883 55.000 4.33 0.00 38.30 4.55
3466 4079 3.117701 TGTCAACCTTGGACAGAATGGAA 60.118 43.478 0.00 0.00 43.62 3.53
3534 4147 7.610580 TGGTTCCAGTTTTTCCTAATTCAAT 57.389 32.000 0.00 0.00 0.00 2.57
4077 5020 0.176910 TGTTTCACTGTCGCAGGTGA 59.823 50.000 10.80 6.06 35.51 4.02
4078 5021 0.304705 GTGTTTCACTGTCGCAGGTG 59.695 55.000 10.80 4.01 35.51 4.00
4103 5046 4.387026 TGAGGACCTGTGATGGATTTTT 57.613 40.909 0.00 0.00 0.00 1.94
4111 5054 5.248020 GGATCTCATATTGAGGACCTGTGAT 59.752 44.000 0.00 0.00 44.39 3.06
4186 5129 7.178983 TCCAAGTGGCTTAAATCAAAATCATCT 59.821 33.333 0.00 0.00 34.44 2.90
4455 5398 3.791320 TCCTGTGAGTCAAAGGATACCT 58.209 45.455 25.88 0.00 42.43 3.08
4674 5617 3.243359 ACATGCTTTCCTTTCCTCCAA 57.757 42.857 0.00 0.00 0.00 3.53
4716 5659 6.644592 TGCGACCAAAAATAAAAGATCCAAAG 59.355 34.615 0.00 0.00 0.00 2.77
4746 5689 1.739562 GGCTCGAGAACACCAGCAG 60.740 63.158 18.75 0.00 33.22 4.24
4781 5724 7.953158 ATCATCTGATTATTTACAGGTGTCG 57.047 36.000 0.00 0.00 43.26 4.35
4841 5833 7.722363 TCATCTGATTATTTACAGGCGAACTA 58.278 34.615 0.00 0.00 35.20 2.24
4922 5925 4.038282 ACAATACCTAACACGCCGATGATA 59.962 41.667 0.00 0.00 0.00 2.15
4923 5926 3.181469 ACAATACCTAACACGCCGATGAT 60.181 43.478 0.00 0.00 0.00 2.45
4924 5927 2.166870 ACAATACCTAACACGCCGATGA 59.833 45.455 0.00 0.00 0.00 2.92
4925 5928 2.538449 GACAATACCTAACACGCCGATG 59.462 50.000 0.00 0.00 0.00 3.84
4926 5929 2.797087 CGACAATACCTAACACGCCGAT 60.797 50.000 0.00 0.00 0.00 4.18
4927 5930 1.467883 CGACAATACCTAACACGCCGA 60.468 52.381 0.00 0.00 0.00 5.54
4928 5931 0.918619 CGACAATACCTAACACGCCG 59.081 55.000 0.00 0.00 0.00 6.46
4929 5932 2.282701 TCGACAATACCTAACACGCC 57.717 50.000 0.00 0.00 0.00 5.68
4930 5933 4.493545 CCAAATCGACAATACCTAACACGC 60.494 45.833 0.00 0.00 0.00 5.34
4931 5934 4.628333 ACCAAATCGACAATACCTAACACG 59.372 41.667 0.00 0.00 0.00 4.49
4947 5950 6.767902 TGGTTCTGCAAGATATAGACCAAATC 59.232 38.462 0.00 0.00 46.36 2.17
4960 5963 5.291178 CACAATTCATTTGGTTCTGCAAGA 58.709 37.500 0.00 0.00 39.77 3.02
4985 5988 0.877071 AGTCTGAATTTGGCAGCACG 59.123 50.000 0.00 0.00 33.45 5.34
4989 5992 5.702670 TGAAGAGTAAGTCTGAATTTGGCAG 59.297 40.000 0.00 0.00 34.84 4.85
5005 6008 5.280654 ACGTGGTAAAAACCTGAAGAGTA 57.719 39.130 0.00 0.00 0.00 2.59
5006 6009 4.146745 ACGTGGTAAAAACCTGAAGAGT 57.853 40.909 0.00 0.00 0.00 3.24
5007 6010 5.295152 ACTACGTGGTAAAAACCTGAAGAG 58.705 41.667 1.30 0.00 0.00 2.85
5009 6012 5.117592 CGTACTACGTGGTAAAAACCTGAAG 59.882 44.000 13.78 0.00 36.74 3.02
5010 6013 4.981674 CGTACTACGTGGTAAAAACCTGAA 59.018 41.667 13.78 0.00 36.74 3.02
5035 6105 9.819267 ACTTTTTGTTTAAACATCCGGAAAATA 57.181 25.926 21.17 0.00 38.95 1.40
5043 6113 7.010091 CAGTGGTGACTTTTTGTTTAAACATCC 59.990 37.037 21.17 13.00 38.95 3.51
5059 6129 3.701205 TTATCATGTGCAGTGGTGACT 57.299 42.857 0.00 0.00 0.00 3.41
5062 6132 2.483877 ACGTTTATCATGTGCAGTGGTG 59.516 45.455 0.00 0.00 0.00 4.17
5068 6138 6.085573 CAGAAAATCACGTTTATCATGTGCA 58.914 36.000 0.00 0.00 41.66 4.57
5101 6171 3.830755 ACTCGGGTTAGTACATTCAGTGT 59.169 43.478 0.00 0.00 44.95 3.55
5115 6185 2.231380 AAGCCCATGGACTCGGGTT 61.231 57.895 15.22 4.82 45.07 4.11
5130 6200 0.895100 TTCATGGTGGAGTGGCAAGC 60.895 55.000 0.00 0.00 0.00 4.01
5146 6216 1.818060 GGGTTGTGTATGCTGCATTCA 59.182 47.619 21.56 18.80 0.00 2.57
5154 6224 2.620115 CTGATCCATGGGTTGTGTATGC 59.380 50.000 13.02 0.00 0.00 3.14
5163 6233 4.039730 CGAGAAGTAATCTGATCCATGGGT 59.960 45.833 13.02 3.70 38.96 4.51
5181 6251 2.577059 GCATGGACGGACCGAGAA 59.423 61.111 23.38 5.18 42.61 2.87
5187 6257 0.527817 CTACTTCGGCATGGACGGAC 60.528 60.000 0.00 0.00 33.33 4.79
5188 6258 0.681887 TCTACTTCGGCATGGACGGA 60.682 55.000 0.00 0.00 33.33 4.69
5190 6260 1.927174 CTTTCTACTTCGGCATGGACG 59.073 52.381 0.00 0.00 34.09 4.79
5191 6261 3.190874 CTCTTTCTACTTCGGCATGGAC 58.809 50.000 0.00 0.00 0.00 4.02
5192 6262 2.168521 CCTCTTTCTACTTCGGCATGGA 59.831 50.000 0.00 0.00 0.00 3.41
5217 6293 0.179000 ACTTCGGCATGGACATCTCC 59.821 55.000 0.00 0.00 37.04 3.71
5218 6294 2.362397 TCTACTTCGGCATGGACATCTC 59.638 50.000 0.00 0.00 0.00 2.75
5525 6601 1.407979 AGTTCGGTATAAGGCGTGAGG 59.592 52.381 0.00 0.00 0.00 3.86
5526 6602 2.865343 AGTTCGGTATAAGGCGTGAG 57.135 50.000 0.00 0.00 0.00 3.51
5527 6603 4.717233 TTTAGTTCGGTATAAGGCGTGA 57.283 40.909 0.00 0.00 0.00 4.35
5528 6604 4.259530 CGTTTTAGTTCGGTATAAGGCGTG 60.260 45.833 0.00 0.00 0.00 5.34
5529 6605 3.859386 CGTTTTAGTTCGGTATAAGGCGT 59.141 43.478 0.00 0.00 0.00 5.68
5530 6606 3.302028 GCGTTTTAGTTCGGTATAAGGCG 60.302 47.826 0.00 0.00 0.00 5.52
5531 6607 3.618150 TGCGTTTTAGTTCGGTATAAGGC 59.382 43.478 0.00 0.00 0.00 4.35
5532 6608 4.259530 CGTGCGTTTTAGTTCGGTATAAGG 60.260 45.833 0.00 0.00 0.00 2.69
5533 6609 4.259530 CCGTGCGTTTTAGTTCGGTATAAG 60.260 45.833 0.00 0.00 34.38 1.73
5534 6610 3.611986 CCGTGCGTTTTAGTTCGGTATAA 59.388 43.478 0.00 0.00 34.38 0.98
5535 6611 3.178267 CCGTGCGTTTTAGTTCGGTATA 58.822 45.455 0.00 0.00 34.38 1.47
5536 6612 1.994779 CCGTGCGTTTTAGTTCGGTAT 59.005 47.619 0.00 0.00 34.38 2.73
5537 6613 1.417372 CCGTGCGTTTTAGTTCGGTA 58.583 50.000 0.00 0.00 34.38 4.02
5538 6614 1.223417 CCCGTGCGTTTTAGTTCGGT 61.223 55.000 0.00 0.00 36.84 4.69
5539 6615 1.494189 CCCGTGCGTTTTAGTTCGG 59.506 57.895 0.00 0.00 38.05 4.30
5540 6616 1.154543 GCCCGTGCGTTTTAGTTCG 60.155 57.895 0.00 0.00 0.00 3.95
5541 6617 4.832767 GCCCGTGCGTTTTAGTTC 57.167 55.556 0.00 0.00 0.00 3.01
5556 6632 4.097361 GACCAAGGTCCTCCCGCC 62.097 72.222 8.06 0.00 39.08 6.13
5557 6633 2.406002 TTTGACCAAGGTCCTCCCGC 62.406 60.000 16.18 0.00 43.97 6.13
5558 6634 0.109723 TTTTGACCAAGGTCCTCCCG 59.890 55.000 16.18 0.00 43.97 5.14
5559 6635 1.423921 TCTTTTGACCAAGGTCCTCCC 59.576 52.381 16.18 0.00 43.97 4.30
5560 6636 2.885266 GTTCTTTTGACCAAGGTCCTCC 59.115 50.000 16.18 0.00 43.97 4.30
5561 6637 2.885266 GGTTCTTTTGACCAAGGTCCTC 59.115 50.000 16.18 0.00 43.97 3.71
5562 6638 2.514160 AGGTTCTTTTGACCAAGGTCCT 59.486 45.455 16.18 1.67 43.97 3.85
5563 6639 2.945456 AGGTTCTTTTGACCAAGGTCC 58.055 47.619 16.18 0.00 43.97 4.46
5564 6640 4.277672 GGTTAGGTTCTTTTGACCAAGGTC 59.722 45.833 12.30 12.30 44.77 3.85
5565 6641 4.212716 GGTTAGGTTCTTTTGACCAAGGT 58.787 43.478 0.00 0.00 0.00 3.50
5566 6642 3.572682 GGGTTAGGTTCTTTTGACCAAGG 59.427 47.826 0.00 0.00 0.00 3.61
5567 6643 4.211920 TGGGTTAGGTTCTTTTGACCAAG 58.788 43.478 0.00 0.00 0.00 3.61
5568 6644 4.252570 TGGGTTAGGTTCTTTTGACCAA 57.747 40.909 0.00 0.00 0.00 3.67
5569 6645 3.955524 TGGGTTAGGTTCTTTTGACCA 57.044 42.857 0.00 0.00 0.00 4.02
5570 6646 7.498239 GTCTATATGGGTTAGGTTCTTTTGACC 59.502 40.741 0.00 0.00 0.00 4.02
5571 6647 7.224167 CGTCTATATGGGTTAGGTTCTTTTGAC 59.776 40.741 0.00 0.00 0.00 3.18
5572 6648 7.270047 CGTCTATATGGGTTAGGTTCTTTTGA 58.730 38.462 0.00 0.00 0.00 2.69
5573 6649 6.018180 GCGTCTATATGGGTTAGGTTCTTTTG 60.018 42.308 0.00 0.00 0.00 2.44
5574 6650 6.053650 GCGTCTATATGGGTTAGGTTCTTTT 58.946 40.000 0.00 0.00 0.00 2.27
5575 6651 5.454329 GGCGTCTATATGGGTTAGGTTCTTT 60.454 44.000 0.00 0.00 0.00 2.52
5576 6652 4.040095 GGCGTCTATATGGGTTAGGTTCTT 59.960 45.833 0.00 0.00 0.00 2.52
5577 6653 3.577415 GGCGTCTATATGGGTTAGGTTCT 59.423 47.826 0.00 0.00 0.00 3.01
5578 6654 3.577415 AGGCGTCTATATGGGTTAGGTTC 59.423 47.826 0.00 0.00 0.00 3.62
5579 6655 3.577415 GAGGCGTCTATATGGGTTAGGTT 59.423 47.826 0.00 0.00 0.00 3.50
5580 6656 3.163467 GAGGCGTCTATATGGGTTAGGT 58.837 50.000 0.00 0.00 0.00 3.08
5581 6657 3.162666 TGAGGCGTCTATATGGGTTAGG 58.837 50.000 8.06 0.00 0.00 2.69
5582 6658 4.866508 TTGAGGCGTCTATATGGGTTAG 57.133 45.455 8.06 0.00 0.00 2.34
5583 6659 4.202284 GGTTTGAGGCGTCTATATGGGTTA 60.202 45.833 8.06 0.00 0.00 2.85
5584 6660 3.433173 GGTTTGAGGCGTCTATATGGGTT 60.433 47.826 8.06 0.00 0.00 4.11
5585 6661 2.104281 GGTTTGAGGCGTCTATATGGGT 59.896 50.000 8.06 0.00 0.00 4.51
5586 6662 2.767505 GGTTTGAGGCGTCTATATGGG 58.232 52.381 8.06 0.00 0.00 4.00
5587 6663 2.404215 CGGTTTGAGGCGTCTATATGG 58.596 52.381 8.06 0.00 0.00 2.74
5588 6664 2.223971 ACCGGTTTGAGGCGTCTATATG 60.224 50.000 0.00 0.00 0.00 1.78
5589 6665 2.035576 GACCGGTTTGAGGCGTCTATAT 59.964 50.000 9.42 0.00 0.00 0.86
5590 6666 1.406539 GACCGGTTTGAGGCGTCTATA 59.593 52.381 9.42 0.00 0.00 1.31
5591 6667 0.175073 GACCGGTTTGAGGCGTCTAT 59.825 55.000 9.42 0.00 0.00 1.98
5592 6668 0.896940 AGACCGGTTTGAGGCGTCTA 60.897 55.000 9.42 0.00 32.15 2.59
5593 6669 2.156051 GAGACCGGTTTGAGGCGTCT 62.156 60.000 9.42 0.00 36.53 4.18
5594 6670 1.737008 GAGACCGGTTTGAGGCGTC 60.737 63.158 9.42 0.00 0.00 5.19
5595 6671 2.035237 TTGAGACCGGTTTGAGGCGT 62.035 55.000 9.42 0.00 0.00 5.68
5596 6672 0.882927 TTTGAGACCGGTTTGAGGCG 60.883 55.000 9.42 0.00 0.00 5.52
5597 6673 0.591659 GTTTGAGACCGGTTTGAGGC 59.408 55.000 9.42 0.00 0.00 4.70
5598 6674 0.865769 CGTTTGAGACCGGTTTGAGG 59.134 55.000 9.42 0.00 0.00 3.86
5599 6675 1.578583 ACGTTTGAGACCGGTTTGAG 58.421 50.000 9.42 0.00 0.00 3.02
5600 6676 1.935199 GAACGTTTGAGACCGGTTTGA 59.065 47.619 9.42 0.00 0.00 2.69
5601 6677 1.332552 CGAACGTTTGAGACCGGTTTG 60.333 52.381 9.42 0.00 0.00 2.93
5602 6678 0.932399 CGAACGTTTGAGACCGGTTT 59.068 50.000 9.42 1.19 0.00 3.27
5603 6679 2.596875 CGAACGTTTGAGACCGGTT 58.403 52.632 9.42 0.00 0.00 4.44
5604 6680 4.331356 CGAACGTTTGAGACCGGT 57.669 55.556 6.92 6.92 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.