Multiple sequence alignment - TraesCS5B01G498700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G498700 chr5B 100.000 3857 0 0 1 3857 665538677 665542533 0.000000e+00 7123.0
1 TraesCS5B01G498700 chr5B 94.369 2220 88 14 603 2819 665173656 665171471 0.000000e+00 3373.0
2 TraesCS5B01G498700 chr5B 88.734 1722 172 16 1064 2773 665026437 665024726 0.000000e+00 2085.0
3 TraesCS5B01G498700 chr5B 90.688 247 17 2 1 247 665184457 665184217 1.340000e-84 324.0
4 TraesCS5B01G498700 chr5B 93.243 148 10 0 299 446 665538824 665538971 6.490000e-53 219.0
5 TraesCS5B01G498700 chr5B 93.243 148 10 0 148 295 665538975 665539122 6.490000e-53 219.0
6 TraesCS5B01G498700 chr5B 96.907 97 3 0 302 398 665184313 665184217 3.080000e-36 163.0
7 TraesCS5B01G498700 chr5A 93.640 2563 110 23 586 3117 656670615 656673155 0.000000e+00 3781.0
8 TraesCS5B01G498700 chr5A 91.369 2549 141 32 299 2813 656493462 656495965 0.000000e+00 3415.0
9 TraesCS5B01G498700 chr5A 89.673 1714 155 10 1064 2773 656222598 656220903 0.000000e+00 2165.0
10 TraesCS5B01G498700 chr5A 90.406 271 26 0 19 289 656493333 656493603 1.320000e-94 357.0
11 TraesCS5B01G498700 chr5A 86.378 323 19 11 3551 3857 656673167 656673480 2.870000e-86 329.0
12 TraesCS5B01G498700 chr5D 93.326 2562 107 27 553 3100 528586729 528589240 0.000000e+00 3725.0
13 TraesCS5B01G498700 chr5D 96.485 2020 60 6 805 2813 528414969 528416988 0.000000e+00 3326.0
14 TraesCS5B01G498700 chr5D 89.180 1719 167 16 1064 2773 528296423 528294715 0.000000e+00 2126.0
15 TraesCS5B01G498700 chr5D 93.023 301 18 2 1 300 528586179 528586477 1.650000e-118 436.0
16 TraesCS5B01G498700 chr5D 87.594 266 16 3 300 561 528586325 528586577 3.770000e-75 292.0
17 TraesCS5B01G498700 chr7D 92.244 361 26 2 3184 3542 477836950 477837310 9.560000e-141 510.0
18 TraesCS5B01G498700 chr7D 89.617 366 33 5 3182 3543 517338536 517338900 9.760000e-126 460.0
19 TraesCS5B01G498700 chr7D 90.580 138 12 1 462 598 491834286 491834423 8.510000e-42 182.0
20 TraesCS5B01G498700 chr1D 90.476 378 33 3 3176 3551 474970225 474970601 2.680000e-136 496.0
21 TraesCS5B01G498700 chr3D 90.237 379 32 5 3175 3549 600110649 600110272 1.250000e-134 490.0
22 TraesCS5B01G498700 chr3D 89.617 366 36 2 3179 3542 590219710 590219345 7.550000e-127 464.0
23 TraesCS5B01G498700 chr6D 90.685 365 32 2 3180 3542 420896426 420896062 5.790000e-133 484.0
24 TraesCS5B01G498700 chr6D 90.331 362 31 4 3184 3542 123967542 123967182 4.510000e-129 472.0
25 TraesCS5B01G498700 chr7B 86.425 442 55 4 1629 2066 706991894 706991454 2.700000e-131 479.0
26 TraesCS5B01G498700 chr7B 88.889 369 35 6 3180 3545 58714891 58715256 2.110000e-122 449.0
27 TraesCS5B01G498700 chr2D 90.556 360 30 4 3184 3540 597962479 597962837 1.250000e-129 473.0
28 TraesCS5B01G498700 chr2D 79.869 611 57 19 1629 2227 645597822 645598378 1.680000e-103 387.0
29 TraesCS5B01G498700 chr2D 90.984 122 8 3 477 598 547270851 547270969 1.110000e-35 161.0
30 TraesCS5B01G498700 chr2B 89.437 142 11 2 462 601 539344064 539343925 3.960000e-40 176.0
31 TraesCS5B01G498700 chr6B 93.939 66 3 1 533 598 702377931 702377867 8.820000e-17 99.0
32 TraesCS5B01G498700 chr3B 89.831 59 6 0 2431 2489 537434386 537434328 4.130000e-10 76.8
33 TraesCS5B01G498700 chr3B 83.333 84 8 5 1397 1477 64315050 64315130 5.350000e-09 73.1
34 TraesCS5B01G498700 chr4A 89.130 46 1 1 259 300 543724717 543724672 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G498700 chr5B 665538677 665542533 3856 False 2520.333333 7123 95.495333 1 3857 3 chr5B.!!$F1 3856
1 TraesCS5B01G498700 chr5B 665171471 665173656 2185 True 3373.000000 3373 94.369000 603 2819 1 chr5B.!!$R2 2216
2 TraesCS5B01G498700 chr5B 665024726 665026437 1711 True 2085.000000 2085 88.734000 1064 2773 1 chr5B.!!$R1 1709
3 TraesCS5B01G498700 chr5A 656220903 656222598 1695 True 2165.000000 2165 89.673000 1064 2773 1 chr5A.!!$R1 1709
4 TraesCS5B01G498700 chr5A 656670615 656673480 2865 False 2055.000000 3781 90.009000 586 3857 2 chr5A.!!$F2 3271
5 TraesCS5B01G498700 chr5A 656493333 656495965 2632 False 1886.000000 3415 90.887500 19 2813 2 chr5A.!!$F1 2794
6 TraesCS5B01G498700 chr5D 528414969 528416988 2019 False 3326.000000 3326 96.485000 805 2813 1 chr5D.!!$F1 2008
7 TraesCS5B01G498700 chr5D 528294715 528296423 1708 True 2126.000000 2126 89.180000 1064 2773 1 chr5D.!!$R1 1709
8 TraesCS5B01G498700 chr5D 528586179 528589240 3061 False 1484.333333 3725 91.314333 1 3100 3 chr5D.!!$F2 3099
9 TraesCS5B01G498700 chr2D 645597822 645598378 556 False 387.000000 387 79.869000 1629 2227 1 chr2D.!!$F3 598

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
787 990 0.102300 CACACACACACACGGAGAGA 59.898 55.0 0.0 0.0 0.0 3.10 F
1959 2258 0.320683 TGTACGAGGAGAACGACGGA 60.321 55.0 0.0 0.0 34.7 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2079 2378 1.115930 ACACCACCAGCTTCGTCTCT 61.116 55.0 0.0 0.0 0.00 3.10 R
3248 3569 0.029567 CGTGCCGGTTGTAGCAAAAA 59.970 50.0 1.9 0.0 41.48 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.888105 TCATTGCTCAGACATTAGAATACCA 58.112 36.000 0.00 0.00 0.00 3.25
35 36 8.840321 CAGACATTAGAATACCAGGGTTTTATG 58.160 37.037 0.00 0.00 0.00 1.90
61 62 9.752961 GTTACCATGGTTTTAAAAATACAGTGT 57.247 29.630 25.38 0.00 0.00 3.55
89 90 7.103641 TCAAACTAAGCCTAAGATACAACCTG 58.896 38.462 0.00 0.00 0.00 4.00
90 91 6.622427 AACTAAGCCTAAGATACAACCTGT 57.378 37.500 0.00 0.00 0.00 4.00
243 246 9.862371 AAGTTGTATATACACTAGATATGCTGC 57.138 33.333 15.20 0.00 35.64 5.25
244 247 9.025041 AGTTGTATATACACTAGATATGCTGCA 57.975 33.333 15.20 4.13 35.64 4.41
245 248 9.809096 GTTGTATATACACTAGATATGCTGCAT 57.191 33.333 20.18 20.18 35.64 3.96
251 254 8.994429 ATACACTAGATATGCTGCATTTAGAC 57.006 34.615 21.56 8.04 0.00 2.59
252 255 6.226787 ACACTAGATATGCTGCATTTAGACC 58.773 40.000 21.56 1.08 0.00 3.85
253 256 5.641209 CACTAGATATGCTGCATTTAGACCC 59.359 44.000 21.56 0.71 0.00 4.46
254 257 4.026356 AGATATGCTGCATTTAGACCCC 57.974 45.455 21.56 0.00 0.00 4.95
255 258 3.654806 AGATATGCTGCATTTAGACCCCT 59.345 43.478 21.56 2.39 0.00 4.79
256 259 4.846367 AGATATGCTGCATTTAGACCCCTA 59.154 41.667 21.56 0.00 0.00 3.53
257 260 3.498774 ATGCTGCATTTAGACCCCTAG 57.501 47.619 9.81 0.00 0.00 3.02
258 261 1.490490 TGCTGCATTTAGACCCCTAGG 59.510 52.381 0.06 0.06 40.04 3.02
259 262 1.815795 GCTGCATTTAGACCCCTAGGC 60.816 57.143 2.05 0.00 36.11 3.93
260 263 1.490490 CTGCATTTAGACCCCTAGGCA 59.510 52.381 2.05 0.00 36.11 4.75
261 264 1.490490 TGCATTTAGACCCCTAGGCAG 59.510 52.381 2.05 0.00 36.11 4.85
262 265 1.490910 GCATTTAGACCCCTAGGCAGT 59.509 52.381 2.05 2.30 36.11 4.40
263 266 2.746472 GCATTTAGACCCCTAGGCAGTG 60.746 54.545 2.05 0.00 36.11 3.66
264 267 1.580059 TTTAGACCCCTAGGCAGTGG 58.420 55.000 2.05 1.14 36.11 4.00
265 268 0.981277 TTAGACCCCTAGGCAGTGGC 60.981 60.000 9.02 9.02 36.11 5.01
266 269 4.162690 GACCCCTAGGCAGTGGCG 62.163 72.222 11.51 0.00 42.47 5.69
267 270 4.715130 ACCCCTAGGCAGTGGCGA 62.715 66.667 11.51 5.03 42.47 5.54
268 271 3.399181 CCCCTAGGCAGTGGCGAA 61.399 66.667 11.51 2.78 42.47 4.70
269 272 2.187946 CCCTAGGCAGTGGCGAAG 59.812 66.667 11.51 12.46 42.47 3.79
285 288 2.677199 CGAAGCTTAGTGCAAGTCTGA 58.323 47.619 0.00 0.00 45.94 3.27
286 289 2.665537 CGAAGCTTAGTGCAAGTCTGAG 59.334 50.000 0.00 0.00 45.94 3.35
287 290 2.758736 AGCTTAGTGCAAGTCTGAGG 57.241 50.000 0.00 0.00 45.94 3.86
288 291 1.277557 AGCTTAGTGCAAGTCTGAGGG 59.722 52.381 0.00 0.00 45.94 4.30
289 292 1.677217 GCTTAGTGCAAGTCTGAGGGG 60.677 57.143 0.00 0.00 42.31 4.79
290 293 0.984230 TTAGTGCAAGTCTGAGGGGG 59.016 55.000 0.00 0.00 0.00 5.40
307 310 4.329831 GGCGTGCCCCATTAAAGA 57.670 55.556 0.00 0.00 0.00 2.52
308 311 2.573920 GGCGTGCCCCATTAAAGAA 58.426 52.632 0.00 0.00 0.00 2.52
309 312 0.455815 GGCGTGCCCCATTAAAGAAG 59.544 55.000 0.00 0.00 0.00 2.85
310 313 1.173913 GCGTGCCCCATTAAAGAAGT 58.826 50.000 0.00 0.00 0.00 3.01
311 314 1.544246 GCGTGCCCCATTAAAGAAGTT 59.456 47.619 0.00 0.00 0.00 2.66
312 315 2.750712 GCGTGCCCCATTAAAGAAGTTA 59.249 45.455 0.00 0.00 0.00 2.24
313 316 3.380320 GCGTGCCCCATTAAAGAAGTTAT 59.620 43.478 0.00 0.00 0.00 1.89
314 317 4.577283 GCGTGCCCCATTAAAGAAGTTATA 59.423 41.667 0.00 0.00 0.00 0.98
315 318 5.240844 GCGTGCCCCATTAAAGAAGTTATAT 59.759 40.000 0.00 0.00 0.00 0.86
316 319 6.567891 GCGTGCCCCATTAAAGAAGTTATATC 60.568 42.308 0.00 0.00 0.00 1.63
317 320 6.710744 CGTGCCCCATTAAAGAAGTTATATCT 59.289 38.462 0.00 0.00 0.00 1.98
318 321 7.876068 CGTGCCCCATTAAAGAAGTTATATCTA 59.124 37.037 0.00 0.00 0.00 1.98
319 322 9.000486 GTGCCCCATTAAAGAAGTTATATCTAC 58.000 37.037 0.00 0.00 0.00 2.59
320 323 8.719596 TGCCCCATTAAAGAAGTTATATCTACA 58.280 33.333 0.00 0.00 0.00 2.74
321 324 9.740710 GCCCCATTAAAGAAGTTATATCTACAT 57.259 33.333 0.00 0.00 0.00 2.29
421 424 2.037367 TCTAGGCAGTGGCGGAGT 59.963 61.111 11.51 0.00 42.47 3.85
425 428 0.978151 TAGGCAGTGGCGGAGTTTAA 59.022 50.000 11.51 0.00 42.47 1.52
446 449 1.987855 CAAGTCTGAGGGGGCCGTA 60.988 63.158 0.00 0.00 0.00 4.02
447 450 1.003051 AAGTCTGAGGGGGCCGTAT 59.997 57.895 0.00 0.00 0.00 3.06
448 451 1.049289 AAGTCTGAGGGGGCCGTATC 61.049 60.000 0.00 0.00 0.00 2.24
449 452 2.122989 TCTGAGGGGGCCGTATCC 60.123 66.667 0.00 0.00 0.00 2.59
450 453 2.122813 CTGAGGGGGCCGTATCCT 60.123 66.667 0.00 0.00 0.00 3.24
451 454 2.122989 TGAGGGGGCCGTATCCTC 60.123 66.667 17.02 17.02 45.36 3.71
454 457 4.576374 GGGGGCCGTATCCTCCCT 62.576 72.222 3.84 0.00 41.11 4.20
455 458 2.923568 GGGGCCGTATCCTCCCTC 60.924 72.222 0.00 0.00 39.95 4.30
456 459 2.923568 GGGCCGTATCCTCCCTCC 60.924 72.222 0.00 0.00 37.08 4.30
457 460 2.923568 GGCCGTATCCTCCCTCCC 60.924 72.222 0.00 0.00 0.00 4.30
458 461 2.923568 GCCGTATCCTCCCTCCCC 60.924 72.222 0.00 0.00 0.00 4.81
459 462 2.203803 CCGTATCCTCCCTCCCCC 60.204 72.222 0.00 0.00 0.00 5.40
460 463 2.612836 CGTATCCTCCCTCCCCCA 59.387 66.667 0.00 0.00 0.00 4.96
561 568 7.681939 TCCTAGTTGTTCATATTTTCGCTTT 57.318 32.000 0.00 0.00 0.00 3.51
562 569 7.526608 TCCTAGTTGTTCATATTTTCGCTTTG 58.473 34.615 0.00 0.00 0.00 2.77
563 570 7.389330 TCCTAGTTGTTCATATTTTCGCTTTGA 59.611 33.333 0.00 0.00 0.00 2.69
564 571 7.481798 CCTAGTTGTTCATATTTTCGCTTTGAC 59.518 37.037 0.00 0.00 0.00 3.18
565 572 6.149633 AGTTGTTCATATTTTCGCTTTGACC 58.850 36.000 0.00 0.00 0.00 4.02
566 573 5.054390 TGTTCATATTTTCGCTTTGACCC 57.946 39.130 0.00 0.00 0.00 4.46
567 574 4.520874 TGTTCATATTTTCGCTTTGACCCA 59.479 37.500 0.00 0.00 0.00 4.51
570 736 1.995376 ATTTTCGCTTTGACCCACCT 58.005 45.000 0.00 0.00 0.00 4.00
648 833 9.301153 GTTGTGACACACTTCTGAAAATAAAAT 57.699 29.630 8.05 0.00 35.11 1.82
694 879 4.599041 TCAAACCGATTCATTCCCTCAAT 58.401 39.130 0.00 0.00 0.00 2.57
695 880 5.016173 TCAAACCGATTCATTCCCTCAATT 58.984 37.500 0.00 0.00 0.00 2.32
784 987 0.739462 ACACACACACACACACGGAG 60.739 55.000 0.00 0.00 0.00 4.63
785 988 0.459411 CACACACACACACACGGAGA 60.459 55.000 0.00 0.00 0.00 3.71
786 989 0.179111 ACACACACACACACGGAGAG 60.179 55.000 0.00 0.00 0.00 3.20
787 990 0.102300 CACACACACACACGGAGAGA 59.898 55.000 0.00 0.00 0.00 3.10
788 991 0.385751 ACACACACACACGGAGAGAG 59.614 55.000 0.00 0.00 0.00 3.20
789 992 0.668535 CACACACACACGGAGAGAGA 59.331 55.000 0.00 0.00 0.00 3.10
900 1109 0.690762 CGGACCTCTTTTCCTCCCAA 59.309 55.000 0.00 0.00 0.00 4.12
995 1228 4.844085 TGGACTTTGGAGAGAGGTTGATTA 59.156 41.667 0.00 0.00 0.00 1.75
1186 1425 0.990374 AACTGCCTGCCAGATCTCTT 59.010 50.000 0.00 0.00 44.64 2.85
1204 1450 5.837437 TCTCTTTGTCTTTGTCTCTGTCTC 58.163 41.667 0.00 0.00 0.00 3.36
1290 1577 3.967886 GCTGAGCTACTTCGGCATA 57.032 52.632 0.00 0.00 46.44 3.14
1521 1808 3.382832 CCGGGACTGAAGCCGAGT 61.383 66.667 0.00 0.00 0.00 4.18
1587 1874 1.742880 CTACCTCGTGTCCGTCGGA 60.743 63.158 10.71 10.71 35.01 4.55
1959 2258 0.320683 TGTACGAGGAGAACGACGGA 60.321 55.000 0.00 0.00 34.70 4.69
2214 2517 2.642254 CCTCGGCCCACACTTCGTA 61.642 63.158 0.00 0.00 0.00 3.43
2745 3048 1.448540 CCTGGGCTTCTACGTGCTG 60.449 63.158 0.00 0.00 0.00 4.41
2868 3171 4.037690 CCGCTGCTTAATTTGAAGTATGC 58.962 43.478 0.00 3.15 32.44 3.14
2922 3232 3.867857 TCGTGATAATTAAGCTGGTGCA 58.132 40.909 0.00 0.00 42.74 4.57
2924 3234 5.606505 TCGTGATAATTAAGCTGGTGCATA 58.393 37.500 0.00 0.00 42.74 3.14
2972 3289 9.309516 ACATGTACTATGTTTGTTAGTAATCGG 57.690 33.333 0.00 0.00 34.75 4.18
2978 3295 4.496360 TGTTTGTTAGTAATCGGCGATCA 58.504 39.130 24.20 12.64 0.00 2.92
3027 3345 5.535030 AGTTTCCAAACTAATCCGAAGCTTT 59.465 36.000 0.00 0.00 46.75 3.51
3117 3438 3.181450 CCCTTGTCCCCTTGTAGATCATC 60.181 52.174 0.00 0.00 0.00 2.92
3118 3439 3.493350 CCTTGTCCCCTTGTAGATCATCG 60.493 52.174 0.00 0.00 0.00 3.84
3119 3440 3.026707 TGTCCCCTTGTAGATCATCGA 57.973 47.619 0.00 0.00 0.00 3.59
3120 3441 3.576861 TGTCCCCTTGTAGATCATCGAT 58.423 45.455 0.00 0.00 0.00 3.59
3121 3442 3.321968 TGTCCCCTTGTAGATCATCGATG 59.678 47.826 19.61 19.61 0.00 3.84
3122 3443 2.899900 TCCCCTTGTAGATCATCGATGG 59.100 50.000 24.61 5.64 0.00 3.51
3123 3444 2.027745 CCCCTTGTAGATCATCGATGGG 60.028 54.545 24.61 14.23 0.00 4.00
3124 3445 2.613977 CCCTTGTAGATCATCGATGGGC 60.614 54.545 24.61 16.31 0.00 5.36
3125 3446 2.301296 CCTTGTAGATCATCGATGGGCT 59.699 50.000 24.61 21.74 0.00 5.19
3126 3447 3.583806 CTTGTAGATCATCGATGGGCTC 58.416 50.000 24.61 17.70 0.00 4.70
3127 3448 2.597455 TGTAGATCATCGATGGGCTCA 58.403 47.619 24.61 16.62 0.00 4.26
3128 3449 2.297315 TGTAGATCATCGATGGGCTCAC 59.703 50.000 24.61 15.77 0.00 3.51
3129 3450 0.316522 AGATCATCGATGGGCTCACG 59.683 55.000 24.61 0.00 0.00 4.35
3130 3451 0.315251 GATCATCGATGGGCTCACGA 59.685 55.000 24.61 12.50 40.18 4.35
3131 3452 0.316522 ATCATCGATGGGCTCACGAG 59.683 55.000 24.61 8.63 39.31 4.18
3132 3453 0.751643 TCATCGATGGGCTCACGAGA 60.752 55.000 24.61 10.28 39.31 4.04
3133 3454 0.318529 CATCGATGGGCTCACGAGAG 60.319 60.000 17.96 5.40 44.96 3.20
3134 3455 0.466372 ATCGATGGGCTCACGAGAGA 60.466 55.000 14.45 0.00 44.98 3.10
3135 3456 0.679960 TCGATGGGCTCACGAGAGAA 60.680 55.000 14.45 0.00 44.98 2.87
3136 3457 0.173481 CGATGGGCTCACGAGAGAAA 59.827 55.000 14.45 0.00 44.98 2.52
3137 3458 1.646189 GATGGGCTCACGAGAGAAAC 58.354 55.000 14.45 3.28 44.98 2.78
3138 3459 0.250513 ATGGGCTCACGAGAGAAACC 59.749 55.000 14.45 11.96 44.98 3.27
3139 3460 1.079057 GGGCTCACGAGAGAAACCC 60.079 63.158 14.45 10.78 44.98 4.11
3140 3461 1.446272 GGCTCACGAGAGAAACCCG 60.446 63.158 14.45 0.00 44.98 5.28
3141 3462 1.289380 GCTCACGAGAGAAACCCGT 59.711 57.895 14.45 0.00 44.98 5.28
3142 3463 0.733223 GCTCACGAGAGAAACCCGTC 60.733 60.000 14.45 0.00 44.98 4.79
3170 3491 6.073222 CCGTAGTTACTTGAGTGCTTTTGAAT 60.073 38.462 0.00 0.00 0.00 2.57
3171 3492 6.792250 CGTAGTTACTTGAGTGCTTTTGAATG 59.208 38.462 0.00 0.00 0.00 2.67
3172 3493 6.699575 AGTTACTTGAGTGCTTTTGAATGT 57.300 33.333 0.00 0.00 0.00 2.71
3173 3494 6.729187 AGTTACTTGAGTGCTTTTGAATGTC 58.271 36.000 0.00 0.00 0.00 3.06
3174 3495 6.543831 AGTTACTTGAGTGCTTTTGAATGTCT 59.456 34.615 0.00 0.00 0.00 3.41
3175 3496 7.715249 AGTTACTTGAGTGCTTTTGAATGTCTA 59.285 33.333 0.00 0.00 0.00 2.59
3176 3497 6.942532 ACTTGAGTGCTTTTGAATGTCTAA 57.057 33.333 0.00 0.00 0.00 2.10
3177 3498 7.333528 ACTTGAGTGCTTTTGAATGTCTAAA 57.666 32.000 0.00 0.00 0.00 1.85
3178 3499 7.771183 ACTTGAGTGCTTTTGAATGTCTAAAA 58.229 30.769 0.00 0.00 0.00 1.52
3179 3500 8.250332 ACTTGAGTGCTTTTGAATGTCTAAAAA 58.750 29.630 0.00 0.00 0.00 1.94
3199 3520 4.689612 AAAAAGGTGTGTCTAGAGCTCA 57.310 40.909 17.77 0.82 0.00 4.26
3200 3521 3.951775 AAAGGTGTGTCTAGAGCTCAG 57.048 47.619 17.77 11.36 0.00 3.35
3201 3522 2.595750 AGGTGTGTCTAGAGCTCAGT 57.404 50.000 17.77 0.00 0.00 3.41
3202 3523 2.442413 AGGTGTGTCTAGAGCTCAGTC 58.558 52.381 17.77 9.54 0.00 3.51
3203 3524 1.131504 GGTGTGTCTAGAGCTCAGTCG 59.868 57.143 17.77 0.75 0.00 4.18
3204 3525 2.077627 GTGTGTCTAGAGCTCAGTCGA 58.922 52.381 17.77 3.34 0.00 4.20
3205 3526 2.077627 TGTGTCTAGAGCTCAGTCGAC 58.922 52.381 17.77 7.70 0.00 4.20
3206 3527 2.289756 TGTGTCTAGAGCTCAGTCGACT 60.290 50.000 17.77 13.58 0.00 4.18
3207 3528 2.095213 GTGTCTAGAGCTCAGTCGACTG 59.905 54.545 34.76 34.76 45.08 3.51
3231 3552 4.407496 ACTTAACGAAGTCTCAGTCGAG 57.593 45.455 0.00 0.00 45.00 4.04
3232 3553 3.814283 ACTTAACGAAGTCTCAGTCGAGT 59.186 43.478 0.00 0.00 45.00 4.18
3233 3554 2.690173 AACGAAGTCTCAGTCGAGTG 57.310 50.000 14.33 14.33 45.00 3.51
3234 3555 1.880271 ACGAAGTCTCAGTCGAGTGA 58.120 50.000 21.32 21.32 29.74 3.41
3235 3556 1.532007 ACGAAGTCTCAGTCGAGTGAC 59.468 52.381 18.99 11.08 41.19 3.67
3236 3557 3.993195 ACGAAGTCTCAGTCGAGTGACG 61.993 54.545 18.99 20.58 45.00 4.35
3266 3587 3.949031 TTTTTGCTACAACCGGCAC 57.051 47.368 0.00 0.00 38.23 5.01
3279 3600 2.897350 GGCACGGCTGGATGCTAC 60.897 66.667 7.94 0.00 41.74 3.58
3280 3601 2.125147 GCACGGCTGGATGCTACA 60.125 61.111 0.00 0.00 42.39 2.74
3281 3602 1.745115 GCACGGCTGGATGCTACAA 60.745 57.895 0.00 0.00 42.39 2.41
3282 3603 1.709147 GCACGGCTGGATGCTACAAG 61.709 60.000 0.00 0.00 42.39 3.16
3283 3604 1.450312 ACGGCTGGATGCTACAAGC 60.450 57.895 0.00 2.29 42.82 4.01
3284 3605 2.528743 CGGCTGGATGCTACAAGCG 61.529 63.158 4.54 0.00 46.26 4.68
3285 3606 2.182842 GGCTGGATGCTACAAGCGG 61.183 63.158 4.54 0.00 46.26 5.52
3286 3607 2.828128 GCTGGATGCTACAAGCGGC 61.828 63.158 0.00 0.00 46.26 6.53
3287 3608 2.511373 TGGATGCTACAAGCGGCG 60.511 61.111 0.51 0.51 46.26 6.46
3288 3609 2.202878 GGATGCTACAAGCGGCGA 60.203 61.111 12.98 0.00 46.26 5.54
3289 3610 2.526120 GGATGCTACAAGCGGCGAC 61.526 63.158 12.98 1.23 46.26 5.19
3302 3623 2.050849 GGCGACGAAAAATGTTGCG 58.949 52.632 0.00 0.00 45.75 4.85
3303 3624 0.384974 GGCGACGAAAAATGTTGCGA 60.385 50.000 2.04 0.00 45.75 5.10
3304 3625 1.602191 GCGACGAAAAATGTTGCGAT 58.398 45.000 2.04 0.00 38.11 4.58
3305 3626 1.314412 GCGACGAAAAATGTTGCGATG 59.686 47.619 2.04 0.00 38.11 3.84
3306 3627 1.904412 CGACGAAAAATGTTGCGATGG 59.096 47.619 2.04 0.00 38.11 3.51
3307 3628 2.664424 CGACGAAAAATGTTGCGATGGT 60.664 45.455 2.04 0.00 38.11 3.55
3308 3629 3.423776 CGACGAAAAATGTTGCGATGGTA 60.424 43.478 2.04 0.00 38.11 3.25
3309 3630 4.658071 GACGAAAAATGTTGCGATGGTAT 58.342 39.130 2.04 0.00 38.11 2.73
3310 3631 5.054390 ACGAAAAATGTTGCGATGGTATT 57.946 34.783 2.04 0.00 38.11 1.89
3311 3632 4.856487 ACGAAAAATGTTGCGATGGTATTG 59.144 37.500 2.04 0.00 38.11 1.90
3312 3633 4.259371 CGAAAAATGTTGCGATGGTATTGC 60.259 41.667 0.00 0.00 38.11 3.56
3317 3638 2.865492 TGCGATGGTATTGCAAGCA 58.135 47.368 4.94 4.06 46.24 3.91
3318 3639 1.172175 TGCGATGGTATTGCAAGCAA 58.828 45.000 10.19 10.19 46.24 3.91
3319 3640 1.135431 TGCGATGGTATTGCAAGCAAC 60.135 47.619 9.97 3.01 46.24 4.17
3320 3641 1.135431 GCGATGGTATTGCAAGCAACA 60.135 47.619 9.97 4.52 38.88 3.33
3321 3642 2.670789 GCGATGGTATTGCAAGCAACAA 60.671 45.455 9.97 0.00 38.88 2.83
3322 3643 2.916716 CGATGGTATTGCAAGCAACAAC 59.083 45.455 9.97 10.95 38.88 3.32
3323 3644 3.611293 CGATGGTATTGCAAGCAACAACA 60.611 43.478 6.24 6.24 34.37 3.33
3324 3645 3.808466 TGGTATTGCAAGCAACAACAA 57.192 38.095 9.97 2.58 38.88 2.83
3325 3646 4.333913 TGGTATTGCAAGCAACAACAAT 57.666 36.364 9.97 0.00 38.88 2.71
3326 3647 5.459536 TGGTATTGCAAGCAACAACAATA 57.540 34.783 9.97 0.00 38.88 1.90
3327 3648 5.847304 TGGTATTGCAAGCAACAACAATAA 58.153 33.333 9.97 0.00 36.90 1.40
3328 3649 6.283694 TGGTATTGCAAGCAACAACAATAAA 58.716 32.000 9.97 0.00 36.90 1.40
3329 3650 6.933521 TGGTATTGCAAGCAACAACAATAAAT 59.066 30.769 9.97 0.00 36.90 1.40
3330 3651 7.095313 TGGTATTGCAAGCAACAACAATAAATG 60.095 33.333 9.97 0.00 36.90 2.32
3331 3652 4.728917 TGCAAGCAACAACAATAAATGC 57.271 36.364 0.00 0.00 37.28 3.56
3333 3654 5.536260 TGCAAGCAACAACAATAAATGCTA 58.464 33.333 0.00 0.00 45.95 3.49
3334 3655 5.404968 TGCAAGCAACAACAATAAATGCTAC 59.595 36.000 0.00 0.00 45.95 3.58
3335 3656 5.404968 GCAAGCAACAACAATAAATGCTACA 59.595 36.000 0.00 0.00 45.95 2.74
3336 3657 6.073873 GCAAGCAACAACAATAAATGCTACAA 60.074 34.615 0.00 0.00 45.95 2.41
3337 3658 7.282916 CAAGCAACAACAATAAATGCTACAAC 58.717 34.615 0.00 0.00 45.95 3.32
3338 3659 5.925969 AGCAACAACAATAAATGCTACAACC 59.074 36.000 0.00 0.00 44.92 3.77
3339 3660 5.164100 GCAACAACAATAAATGCTACAACCG 60.164 40.000 0.00 0.00 34.29 4.44
3340 3661 5.699097 ACAACAATAAATGCTACAACCGT 57.301 34.783 0.00 0.00 0.00 4.83
3341 3662 6.079424 ACAACAATAAATGCTACAACCGTT 57.921 33.333 0.00 0.00 0.00 4.44
3342 3663 6.146898 ACAACAATAAATGCTACAACCGTTC 58.853 36.000 0.00 0.00 0.00 3.95
3343 3664 6.016610 ACAACAATAAATGCTACAACCGTTCT 60.017 34.615 0.00 0.00 0.00 3.01
3344 3665 6.569179 ACAATAAATGCTACAACCGTTCTT 57.431 33.333 0.00 0.00 0.00 2.52
3345 3666 6.977213 ACAATAAATGCTACAACCGTTCTTT 58.023 32.000 0.00 0.00 0.00 2.52
3346 3667 7.081976 ACAATAAATGCTACAACCGTTCTTTC 58.918 34.615 0.00 0.00 0.00 2.62
3347 3668 7.040686 ACAATAAATGCTACAACCGTTCTTTCT 60.041 33.333 0.00 0.00 0.00 2.52
3348 3669 4.749245 AATGCTACAACCGTTCTTTCTG 57.251 40.909 0.00 0.00 0.00 3.02
3349 3670 3.462483 TGCTACAACCGTTCTTTCTGA 57.538 42.857 0.00 0.00 0.00 3.27
3350 3671 3.799366 TGCTACAACCGTTCTTTCTGAA 58.201 40.909 0.00 0.00 0.00 3.02
3351 3672 4.193090 TGCTACAACCGTTCTTTCTGAAA 58.807 39.130 2.44 2.44 36.30 2.69
3352 3673 4.819630 TGCTACAACCGTTCTTTCTGAAAT 59.180 37.500 2.88 0.00 36.30 2.17
3353 3674 5.147162 GCTACAACCGTTCTTTCTGAAATG 58.853 41.667 2.88 0.08 36.30 2.32
3354 3675 3.964909 ACAACCGTTCTTTCTGAAATGC 58.035 40.909 2.88 0.00 36.30 3.56
3355 3676 3.632145 ACAACCGTTCTTTCTGAAATGCT 59.368 39.130 2.88 0.00 36.30 3.79
3356 3677 4.819630 ACAACCGTTCTTTCTGAAATGCTA 59.180 37.500 2.88 0.00 36.30 3.49
3357 3678 5.147162 CAACCGTTCTTTCTGAAATGCTAC 58.853 41.667 2.88 0.00 36.30 3.58
3358 3679 4.385825 ACCGTTCTTTCTGAAATGCTACA 58.614 39.130 2.88 0.00 36.30 2.74
3359 3680 4.819630 ACCGTTCTTTCTGAAATGCTACAA 59.180 37.500 2.88 0.00 36.30 2.41
3360 3681 5.147162 CCGTTCTTTCTGAAATGCTACAAC 58.853 41.667 2.88 0.73 36.30 3.32
3361 3682 5.147162 CGTTCTTTCTGAAATGCTACAACC 58.853 41.667 2.88 0.00 36.30 3.77
3362 3683 5.147162 GTTCTTTCTGAAATGCTACAACCG 58.853 41.667 2.88 0.00 36.30 4.44
3363 3684 4.385825 TCTTTCTGAAATGCTACAACCGT 58.614 39.130 2.88 0.00 0.00 4.83
3364 3685 4.451096 TCTTTCTGAAATGCTACAACCGTC 59.549 41.667 2.88 0.00 0.00 4.79
3365 3686 3.394674 TCTGAAATGCTACAACCGTCA 57.605 42.857 0.00 0.00 0.00 4.35
3366 3687 3.325870 TCTGAAATGCTACAACCGTCAG 58.674 45.455 0.00 0.00 33.82 3.51
3367 3688 3.067106 CTGAAATGCTACAACCGTCAGT 58.933 45.455 0.00 0.00 0.00 3.41
3368 3689 2.805671 TGAAATGCTACAACCGTCAGTG 59.194 45.455 0.00 0.00 0.00 3.66
3369 3690 2.831685 AATGCTACAACCGTCAGTGA 57.168 45.000 0.00 0.00 0.00 3.41
3370 3691 2.831685 ATGCTACAACCGTCAGTGAA 57.168 45.000 0.00 0.00 0.00 3.18
3371 3692 2.605837 TGCTACAACCGTCAGTGAAA 57.394 45.000 0.00 0.00 0.00 2.69
3372 3693 2.479837 TGCTACAACCGTCAGTGAAAG 58.520 47.619 0.00 0.00 0.00 2.62
3373 3694 2.101750 TGCTACAACCGTCAGTGAAAGA 59.898 45.455 0.00 0.00 0.00 2.52
3374 3695 3.244078 TGCTACAACCGTCAGTGAAAGAT 60.244 43.478 0.00 0.00 0.00 2.40
3375 3696 3.123621 GCTACAACCGTCAGTGAAAGATG 59.876 47.826 0.00 0.00 0.00 2.90
3376 3697 3.194005 ACAACCGTCAGTGAAAGATGT 57.806 42.857 0.00 0.00 0.00 3.06
3377 3698 3.541632 ACAACCGTCAGTGAAAGATGTT 58.458 40.909 0.00 0.00 0.00 2.71
3378 3699 3.312421 ACAACCGTCAGTGAAAGATGTTG 59.688 43.478 14.71 14.71 37.00 3.33
3379 3700 1.873591 ACCGTCAGTGAAAGATGTTGC 59.126 47.619 0.00 0.00 0.00 4.17
3380 3701 1.872952 CCGTCAGTGAAAGATGTTGCA 59.127 47.619 0.00 0.00 0.00 4.08
3381 3702 2.290367 CCGTCAGTGAAAGATGTTGCAA 59.710 45.455 0.00 0.00 0.00 4.08
3382 3703 3.291585 CGTCAGTGAAAGATGTTGCAAC 58.708 45.455 22.83 22.83 0.00 4.17
3383 3704 3.632189 GTCAGTGAAAGATGTTGCAACC 58.368 45.455 26.14 12.17 0.00 3.77
3384 3705 2.290367 TCAGTGAAAGATGTTGCAACCG 59.710 45.455 26.14 5.64 0.00 4.44
3385 3706 1.608590 AGTGAAAGATGTTGCAACCGG 59.391 47.619 26.14 0.00 0.00 5.28
3386 3707 1.336755 GTGAAAGATGTTGCAACCGGT 59.663 47.619 26.14 12.60 0.00 5.28
3387 3708 1.336440 TGAAAGATGTTGCAACCGGTG 59.664 47.619 26.14 3.35 0.00 4.94
3388 3709 1.606668 GAAAGATGTTGCAACCGGTGA 59.393 47.619 26.14 8.09 0.00 4.02
3389 3710 1.238439 AAGATGTTGCAACCGGTGAG 58.762 50.000 26.14 5.17 0.00 3.51
3390 3711 0.396435 AGATGTTGCAACCGGTGAGA 59.604 50.000 26.14 6.55 0.00 3.27
3391 3712 1.003580 AGATGTTGCAACCGGTGAGAT 59.996 47.619 26.14 11.33 0.00 2.75
3392 3713 2.236146 AGATGTTGCAACCGGTGAGATA 59.764 45.455 26.14 5.01 0.00 1.98
3393 3714 2.552599 TGTTGCAACCGGTGAGATAA 57.447 45.000 26.14 0.76 0.00 1.75
3394 3715 2.147958 TGTTGCAACCGGTGAGATAAC 58.852 47.619 26.14 13.23 0.00 1.89
3395 3716 1.127951 GTTGCAACCGGTGAGATAACG 59.872 52.381 19.15 0.00 0.00 3.18
3396 3717 0.319083 TGCAACCGGTGAGATAACGT 59.681 50.000 8.52 0.00 0.00 3.99
3397 3718 0.719465 GCAACCGGTGAGATAACGTG 59.281 55.000 8.52 0.00 0.00 4.49
3398 3719 0.719465 CAACCGGTGAGATAACGTGC 59.281 55.000 8.52 0.00 0.00 5.34
3399 3720 0.606604 AACCGGTGAGATAACGTGCT 59.393 50.000 8.52 0.00 0.00 4.40
3400 3721 1.466856 ACCGGTGAGATAACGTGCTA 58.533 50.000 6.12 0.00 0.00 3.49
3401 3722 1.133790 ACCGGTGAGATAACGTGCTAC 59.866 52.381 6.12 0.00 0.00 3.58
3402 3723 1.133598 CCGGTGAGATAACGTGCTACA 59.866 52.381 0.00 0.00 0.00 2.74
3403 3724 2.416296 CCGGTGAGATAACGTGCTACAA 60.416 50.000 0.00 0.00 0.00 2.41
3404 3725 2.597305 CGGTGAGATAACGTGCTACAAC 59.403 50.000 0.00 0.00 0.00 3.32
3405 3726 2.928116 GGTGAGATAACGTGCTACAACC 59.072 50.000 0.00 0.00 0.00 3.77
3406 3727 2.597305 GTGAGATAACGTGCTACAACCG 59.403 50.000 0.00 0.00 0.00 4.44
3407 3728 2.190981 GAGATAACGTGCTACAACCGG 58.809 52.381 0.00 0.00 0.00 5.28
3408 3729 1.547372 AGATAACGTGCTACAACCGGT 59.453 47.619 0.00 0.00 0.00 5.28
3409 3730 1.657094 GATAACGTGCTACAACCGGTG 59.343 52.381 8.52 4.99 0.00 4.94
3410 3731 0.672889 TAACGTGCTACAACCGGTGA 59.327 50.000 8.52 0.00 0.00 4.02
3411 3732 0.179078 AACGTGCTACAACCGGTGAA 60.179 50.000 8.52 0.00 0.00 3.18
3412 3733 0.599204 ACGTGCTACAACCGGTGAAG 60.599 55.000 8.52 7.35 0.00 3.02
3413 3734 1.289109 CGTGCTACAACCGGTGAAGG 61.289 60.000 8.52 0.22 37.30 3.46
3414 3735 0.034337 GTGCTACAACCGGTGAAGGA 59.966 55.000 8.52 4.28 34.73 3.36
3415 3736 0.034337 TGCTACAACCGGTGAAGGAC 59.966 55.000 8.52 0.00 34.73 3.85
3416 3737 1.012486 GCTACAACCGGTGAAGGACG 61.012 60.000 8.52 0.00 34.73 4.79
3421 3742 2.819595 CCGGTGAAGGACGGCATG 60.820 66.667 0.00 0.00 43.96 4.06
3422 3743 3.499737 CGGTGAAGGACGGCATGC 61.500 66.667 9.90 9.90 0.00 4.06
3423 3744 2.045926 GGTGAAGGACGGCATGCT 60.046 61.111 18.92 0.00 0.00 3.79
3424 3745 1.220749 GGTGAAGGACGGCATGCTA 59.779 57.895 18.92 0.00 0.00 3.49
3425 3746 1.090052 GGTGAAGGACGGCATGCTAC 61.090 60.000 18.92 9.04 0.00 3.58
3426 3747 0.391130 GTGAAGGACGGCATGCTACA 60.391 55.000 18.92 4.96 0.00 2.74
3427 3748 0.323302 TGAAGGACGGCATGCTACAA 59.677 50.000 18.92 0.00 0.00 2.41
3428 3749 0.727398 GAAGGACGGCATGCTACAAC 59.273 55.000 18.92 4.80 0.00 3.32
3429 3750 0.676782 AAGGACGGCATGCTACAACC 60.677 55.000 18.92 13.57 0.00 3.77
3430 3751 1.376683 GGACGGCATGCTACAACCA 60.377 57.895 18.92 0.00 0.00 3.67
3431 3752 0.958382 GGACGGCATGCTACAACCAA 60.958 55.000 18.92 0.00 0.00 3.67
3432 3753 0.168128 GACGGCATGCTACAACCAAC 59.832 55.000 18.92 0.00 0.00 3.77
3433 3754 0.536233 ACGGCATGCTACAACCAACA 60.536 50.000 18.92 0.00 0.00 3.33
3434 3755 0.595588 CGGCATGCTACAACCAACAA 59.404 50.000 18.92 0.00 0.00 2.83
3435 3756 1.665735 CGGCATGCTACAACCAACAAC 60.666 52.381 18.92 0.00 0.00 3.32
3436 3757 1.339610 GGCATGCTACAACCAACAACA 59.660 47.619 18.92 0.00 0.00 3.33
3437 3758 2.029110 GGCATGCTACAACCAACAACAT 60.029 45.455 18.92 0.00 0.00 2.71
3438 3759 3.192422 GGCATGCTACAACCAACAACATA 59.808 43.478 18.92 0.00 0.00 2.29
3439 3760 4.414852 GCATGCTACAACCAACAACATAG 58.585 43.478 11.37 0.00 0.00 2.23
3440 3761 4.155826 GCATGCTACAACCAACAACATAGA 59.844 41.667 11.37 0.00 0.00 1.98
3441 3762 5.163622 GCATGCTACAACCAACAACATAGAT 60.164 40.000 11.37 0.00 0.00 1.98
3442 3763 5.878332 TGCTACAACCAACAACATAGATG 57.122 39.130 0.00 0.00 0.00 2.90
3443 3764 5.312895 TGCTACAACCAACAACATAGATGT 58.687 37.500 0.00 0.00 44.20 3.06
3455 3776 4.937201 ACATAGATGTTGCGACCATAGA 57.063 40.909 0.45 0.00 37.90 1.98
3456 3777 5.276461 ACATAGATGTTGCGACCATAGAA 57.724 39.130 0.45 0.00 37.90 2.10
3457 3778 5.670485 ACATAGATGTTGCGACCATAGAAA 58.330 37.500 0.45 0.00 37.90 2.52
3458 3779 6.112734 ACATAGATGTTGCGACCATAGAAAA 58.887 36.000 0.45 0.00 37.90 2.29
3459 3780 6.597672 ACATAGATGTTGCGACCATAGAAAAA 59.402 34.615 0.45 0.00 37.90 1.94
3484 3805 4.901866 GTTGGAAACGTGGCATAAAATG 57.098 40.909 0.00 0.00 36.92 2.32
3485 3806 4.303282 GTTGGAAACGTGGCATAAAATGT 58.697 39.130 0.00 0.00 36.92 2.71
3486 3807 4.592485 TGGAAACGTGGCATAAAATGTT 57.408 36.364 0.00 0.00 0.00 2.71
3487 3808 4.302455 TGGAAACGTGGCATAAAATGTTG 58.698 39.130 0.00 0.00 0.00 3.33
3488 3809 3.122780 GGAAACGTGGCATAAAATGTTGC 59.877 43.478 0.00 0.00 38.14 4.17
3489 3810 3.377346 AACGTGGCATAAAATGTTGCA 57.623 38.095 0.00 0.00 40.66 4.08
3490 3811 3.591196 ACGTGGCATAAAATGTTGCAT 57.409 38.095 0.00 0.00 40.66 3.96
3491 3812 3.252400 ACGTGGCATAAAATGTTGCATG 58.748 40.909 0.00 0.00 40.66 4.06
3492 3813 2.604011 CGTGGCATAAAATGTTGCATGG 59.396 45.455 0.00 0.00 40.66 3.66
3493 3814 3.598299 GTGGCATAAAATGTTGCATGGT 58.402 40.909 0.00 0.00 40.66 3.55
3494 3815 3.618150 GTGGCATAAAATGTTGCATGGTC 59.382 43.478 0.00 0.00 40.66 4.02
3495 3816 2.859538 GGCATAAAATGTTGCATGGTCG 59.140 45.455 0.00 0.00 40.66 4.79
3496 3817 3.428725 GGCATAAAATGTTGCATGGTCGA 60.429 43.478 0.00 0.00 40.66 4.20
3497 3818 3.547468 GCATAAAATGTTGCATGGTCGAC 59.453 43.478 7.13 7.13 38.72 4.20
3498 3819 4.675146 GCATAAAATGTTGCATGGTCGACT 60.675 41.667 16.46 0.00 38.72 4.18
3499 3820 2.995466 AAATGTTGCATGGTCGACTG 57.005 45.000 16.46 8.03 0.00 3.51
3500 3821 2.183478 AATGTTGCATGGTCGACTGA 57.817 45.000 16.46 2.65 0.00 3.41
3501 3822 1.730501 ATGTTGCATGGTCGACTGAG 58.269 50.000 16.46 6.42 0.00 3.35
3502 3823 0.678950 TGTTGCATGGTCGACTGAGA 59.321 50.000 16.46 0.00 0.00 3.27
3503 3824 1.071605 GTTGCATGGTCGACTGAGAC 58.928 55.000 16.46 5.53 40.25 3.36
3504 3825 0.969149 TTGCATGGTCGACTGAGACT 59.031 50.000 16.46 0.00 40.76 3.24
3505 3826 0.969149 TGCATGGTCGACTGAGACTT 59.031 50.000 16.46 0.00 40.76 3.01
3506 3827 1.337167 TGCATGGTCGACTGAGACTTG 60.337 52.381 16.46 7.76 40.76 3.16
3507 3828 2.001812 CATGGTCGACTGAGACTTGG 57.998 55.000 16.46 0.00 40.76 3.61
3508 3829 1.273606 CATGGTCGACTGAGACTTGGT 59.726 52.381 16.46 0.00 40.76 3.67
3509 3830 1.410004 TGGTCGACTGAGACTTGGTT 58.590 50.000 16.46 0.00 40.76 3.67
3510 3831 2.589720 TGGTCGACTGAGACTTGGTTA 58.410 47.619 16.46 0.00 40.76 2.85
3511 3832 2.960384 TGGTCGACTGAGACTTGGTTAA 59.040 45.455 16.46 0.00 40.76 2.01
3512 3833 3.385433 TGGTCGACTGAGACTTGGTTAAA 59.615 43.478 16.46 0.00 40.76 1.52
3513 3834 4.039973 TGGTCGACTGAGACTTGGTTAAAT 59.960 41.667 16.46 0.00 40.76 1.40
3514 3835 4.626172 GGTCGACTGAGACTTGGTTAAATC 59.374 45.833 16.46 0.00 40.76 2.17
3515 3836 5.471257 GTCGACTGAGACTTGGTTAAATCT 58.529 41.667 8.70 0.00 38.09 2.40
3516 3837 5.573669 GTCGACTGAGACTTGGTTAAATCTC 59.426 44.000 8.70 0.00 38.09 2.75
3517 3838 5.243060 TCGACTGAGACTTGGTTAAATCTCA 59.757 40.000 3.03 3.03 44.05 3.27
3521 3842 5.470368 TGAGACTTGGTTAAATCTCAGTCG 58.530 41.667 0.00 0.00 41.99 4.18
3522 3843 5.243060 TGAGACTTGGTTAAATCTCAGTCGA 59.757 40.000 0.00 0.00 41.99 4.20
3523 3844 5.471257 AGACTTGGTTAAATCTCAGTCGAC 58.529 41.667 7.70 7.70 0.00 4.20
3524 3845 5.244178 AGACTTGGTTAAATCTCAGTCGACT 59.756 40.000 13.58 13.58 0.00 4.18
3525 3846 5.230942 ACTTGGTTAAATCTCAGTCGACTG 58.769 41.667 34.76 34.76 45.08 3.51
3537 3858 4.590400 CAGTCGACTGATTTTTAGCAGG 57.410 45.455 36.73 7.99 46.59 4.85
3538 3859 3.003480 AGTCGACTGATTTTTAGCAGGC 58.997 45.455 19.30 0.00 36.80 4.85
3539 3860 2.096013 GTCGACTGATTTTTAGCAGGCC 59.904 50.000 8.70 0.00 36.81 5.19
3540 3861 1.401905 CGACTGATTTTTAGCAGGCCC 59.598 52.381 0.00 0.00 36.81 5.80
3541 3862 1.401905 GACTGATTTTTAGCAGGCCCG 59.598 52.381 0.00 0.00 34.01 6.13
3542 3863 1.004277 ACTGATTTTTAGCAGGCCCGA 59.996 47.619 0.00 0.00 36.47 5.14
3543 3864 2.091541 CTGATTTTTAGCAGGCCCGAA 58.908 47.619 0.00 0.00 0.00 4.30
3544 3865 2.491693 CTGATTTTTAGCAGGCCCGAAA 59.508 45.455 0.00 0.00 0.00 3.46
3545 3866 2.894126 TGATTTTTAGCAGGCCCGAAAA 59.106 40.909 0.00 0.00 0.00 2.29
3546 3867 3.322254 TGATTTTTAGCAGGCCCGAAAAA 59.678 39.130 12.61 12.61 35.78 1.94
3611 3932 8.989980 GGAAATCACCTTGCTATATACTAACAC 58.010 37.037 0.00 0.00 0.00 3.32
3612 3933 9.765795 GAAATCACCTTGCTATATACTAACACT 57.234 33.333 0.00 0.00 0.00 3.55
3627 3951 2.865343 ACACTCTCGTTTGACTCGTT 57.135 45.000 0.00 0.00 0.00 3.85
3727 4064 1.927174 GATGAAAGATGTCACGGACGG 59.073 52.381 0.00 0.00 34.95 4.79
3731 4068 0.898789 AAGATGTCACGGACGGGTCT 60.899 55.000 0.00 0.00 34.95 3.85
3749 4086 3.180613 GTCTGGCTCGTTTCTAGTTAGC 58.819 50.000 0.00 0.00 0.00 3.09
3794 4131 3.380486 TCGAAGCTACGAAAGTACTCG 57.620 47.619 0.00 0.00 46.88 4.18
3843 4180 8.303876 ACAAAAGGGTAAGCAAAATATGTGTAG 58.696 33.333 0.00 0.00 0.00 2.74
3850 4187 4.085733 AGCAAAATATGTGTAGTGGCCAA 58.914 39.130 7.24 0.00 0.00 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 7.034967 TGGTAACATAAAACCCTGGTATTCT 57.965 36.000 0.00 0.00 46.17 2.40
35 36 9.752961 ACACTGTATTTTTAAAACCATGGTAAC 57.247 29.630 20.12 6.13 0.00 2.50
58 59 7.817962 TGTATCTTAGGCTTAGTTTGAGAACAC 59.182 37.037 0.00 0.00 38.26 3.32
61 62 7.822822 GGTTGTATCTTAGGCTTAGTTTGAGAA 59.177 37.037 0.00 0.00 0.00 2.87
89 90 7.094549 TGCATCCACCTACAACTGTTTTTATAC 60.095 37.037 0.00 0.00 0.00 1.47
90 91 6.943146 TGCATCCACCTACAACTGTTTTTATA 59.057 34.615 0.00 0.00 0.00 0.98
217 220 9.862371 GCAGCATATCTAGTGTATATACAACTT 57.138 33.333 17.07 8.69 38.04 2.66
218 221 9.025041 TGCAGCATATCTAGTGTATATACAACT 57.975 33.333 17.07 16.91 38.04 3.16
219 222 9.809096 ATGCAGCATATCTAGTGTATATACAAC 57.191 33.333 17.07 11.26 38.04 3.32
226 229 8.037758 GGTCTAAATGCAGCATATCTAGTGTAT 58.962 37.037 8.75 0.00 0.00 2.29
227 230 7.378966 GGTCTAAATGCAGCATATCTAGTGTA 58.621 38.462 8.75 0.00 0.00 2.90
228 231 6.226787 GGTCTAAATGCAGCATATCTAGTGT 58.773 40.000 8.75 0.00 0.00 3.55
229 232 5.641209 GGGTCTAAATGCAGCATATCTAGTG 59.359 44.000 8.75 0.00 0.00 2.74
230 233 5.280215 GGGGTCTAAATGCAGCATATCTAGT 60.280 44.000 8.75 0.00 0.00 2.57
231 234 5.046014 AGGGGTCTAAATGCAGCATATCTAG 60.046 44.000 8.75 10.06 0.00 2.43
232 235 4.846367 AGGGGTCTAAATGCAGCATATCTA 59.154 41.667 8.75 0.12 0.00 1.98
233 236 3.654806 AGGGGTCTAAATGCAGCATATCT 59.345 43.478 8.75 0.00 0.00 1.98
234 237 4.026356 AGGGGTCTAAATGCAGCATATC 57.974 45.455 8.75 0.00 0.00 1.63
235 238 4.018960 CCTAGGGGTCTAAATGCAGCATAT 60.019 45.833 8.75 0.00 0.00 1.78
236 239 3.327757 CCTAGGGGTCTAAATGCAGCATA 59.672 47.826 8.75 0.00 0.00 3.14
237 240 2.107204 CCTAGGGGTCTAAATGCAGCAT 59.893 50.000 0.52 0.52 0.00 3.79
238 241 1.490490 CCTAGGGGTCTAAATGCAGCA 59.510 52.381 0.00 0.00 0.00 4.41
239 242 1.815795 GCCTAGGGGTCTAAATGCAGC 60.816 57.143 11.72 0.00 34.45 5.25
240 243 1.490490 TGCCTAGGGGTCTAAATGCAG 59.510 52.381 11.72 0.00 34.45 4.41
241 244 1.490490 CTGCCTAGGGGTCTAAATGCA 59.510 52.381 11.72 0.00 34.45 3.96
242 245 1.490910 ACTGCCTAGGGGTCTAAATGC 59.509 52.381 11.72 0.00 34.45 3.56
243 246 2.158755 CCACTGCCTAGGGGTCTAAATG 60.159 54.545 11.72 0.00 42.94 2.32
244 247 2.127708 CCACTGCCTAGGGGTCTAAAT 58.872 52.381 11.72 0.00 42.94 1.40
245 248 1.580059 CCACTGCCTAGGGGTCTAAA 58.420 55.000 11.72 0.00 42.94 1.85
246 249 3.317280 CCACTGCCTAGGGGTCTAA 57.683 57.895 11.72 0.00 42.94 2.10
252 255 2.187946 CTTCGCCACTGCCTAGGG 59.812 66.667 11.72 0.00 0.00 3.53
253 256 2.512515 GCTTCGCCACTGCCTAGG 60.513 66.667 3.67 3.67 0.00 3.02
254 257 0.175760 TAAGCTTCGCCACTGCCTAG 59.824 55.000 0.00 0.00 0.00 3.02
255 258 0.175760 CTAAGCTTCGCCACTGCCTA 59.824 55.000 0.00 0.00 0.00 3.93
256 259 1.078848 CTAAGCTTCGCCACTGCCT 60.079 57.895 0.00 0.00 0.00 4.75
257 260 1.376037 ACTAAGCTTCGCCACTGCC 60.376 57.895 0.00 0.00 0.00 4.85
258 261 1.790387 CACTAAGCTTCGCCACTGC 59.210 57.895 0.00 0.00 0.00 4.40
259 262 0.950555 TGCACTAAGCTTCGCCACTG 60.951 55.000 0.00 0.00 45.94 3.66
260 263 0.250295 TTGCACTAAGCTTCGCCACT 60.250 50.000 0.00 0.00 45.94 4.00
261 264 0.166814 CTTGCACTAAGCTTCGCCAC 59.833 55.000 0.00 0.00 45.94 5.01
262 265 0.250295 ACTTGCACTAAGCTTCGCCA 60.250 50.000 0.00 0.00 45.94 5.69
263 266 0.444260 GACTTGCACTAAGCTTCGCC 59.556 55.000 0.00 0.00 45.94 5.54
264 267 1.127582 CAGACTTGCACTAAGCTTCGC 59.872 52.381 0.00 5.27 45.94 4.70
265 268 2.665537 CTCAGACTTGCACTAAGCTTCG 59.334 50.000 0.00 0.00 45.94 3.79
266 269 2.999355 CCTCAGACTTGCACTAAGCTTC 59.001 50.000 0.00 0.00 45.94 3.86
267 270 2.289945 CCCTCAGACTTGCACTAAGCTT 60.290 50.000 3.48 3.48 45.94 3.74
268 271 1.277557 CCCTCAGACTTGCACTAAGCT 59.722 52.381 0.00 0.00 45.94 3.74
269 272 1.677217 CCCCTCAGACTTGCACTAAGC 60.677 57.143 0.00 0.00 40.16 3.09
270 273 1.065854 CCCCCTCAGACTTGCACTAAG 60.066 57.143 0.00 0.00 42.30 2.18
271 274 0.984230 CCCCCTCAGACTTGCACTAA 59.016 55.000 0.00 0.00 0.00 2.24
272 275 2.683916 CCCCCTCAGACTTGCACTA 58.316 57.895 0.00 0.00 0.00 2.74
273 276 3.488423 CCCCCTCAGACTTGCACT 58.512 61.111 0.00 0.00 0.00 4.40
290 293 0.455815 CTTCTTTAATGGGGCACGCC 59.544 55.000 0.00 0.00 42.25 5.68
291 294 1.173913 ACTTCTTTAATGGGGCACGC 58.826 50.000 0.00 0.00 43.69 5.34
292 295 6.710744 AGATATAACTTCTTTAATGGGGCACG 59.289 38.462 0.00 0.00 0.00 5.34
293 296 9.000486 GTAGATATAACTTCTTTAATGGGGCAC 58.000 37.037 0.00 0.00 0.00 5.01
294 297 8.719596 TGTAGATATAACTTCTTTAATGGGGCA 58.280 33.333 0.00 0.00 0.00 5.36
295 298 9.740710 ATGTAGATATAACTTCTTTAATGGGGC 57.259 33.333 0.00 0.00 0.00 5.80
421 424 2.883888 GCCCCCTCAGACTTGCATTAAA 60.884 50.000 0.00 0.00 0.00 1.52
425 428 2.679716 GCCCCCTCAGACTTGCAT 59.320 61.111 0.00 0.00 0.00 3.96
446 449 4.124126 GGGTGGGGGAGGGAGGAT 62.124 72.222 0.00 0.00 0.00 3.24
529 536 7.961326 AATATGAACAACTAGGAAGGCAAAT 57.039 32.000 0.00 0.00 0.00 2.32
536 543 7.681939 AAGCGAAAATATGAACAACTAGGAA 57.318 32.000 0.00 0.00 0.00 3.36
561 568 2.711009 ACAAGAATCTCAAGGTGGGTCA 59.289 45.455 0.00 0.00 0.00 4.02
562 569 3.244561 TGACAAGAATCTCAAGGTGGGTC 60.245 47.826 0.00 0.00 0.00 4.46
563 570 2.711009 TGACAAGAATCTCAAGGTGGGT 59.289 45.455 0.00 0.00 0.00 4.51
564 571 3.423539 TGACAAGAATCTCAAGGTGGG 57.576 47.619 0.00 0.00 0.00 4.61
565 572 3.190118 GCTTGACAAGAATCTCAAGGTGG 59.810 47.826 19.51 0.00 42.49 4.61
566 573 4.416505 GCTTGACAAGAATCTCAAGGTG 57.583 45.455 19.51 0.00 42.49 4.00
567 574 4.363991 AGCTTGACAAGAATCTCAAGGT 57.636 40.909 19.51 6.24 45.82 3.50
570 736 3.329386 CGGAGCTTGACAAGAATCTCAA 58.671 45.455 19.51 0.00 0.00 3.02
655 840 4.099419 GGTTTGAGGAATTTGTTGGTGACT 59.901 41.667 0.00 0.00 0.00 3.41
659 844 3.292460 TCGGTTTGAGGAATTTGTTGGT 58.708 40.909 0.00 0.00 0.00 3.67
709 894 0.182775 AGGAGGCCTCGTTTTTGTGT 59.817 50.000 26.36 0.00 0.00 3.72
764 949 0.320858 TCCGTGTGTGTGTGTGTGTT 60.321 50.000 0.00 0.00 0.00 3.32
789 992 2.294074 GTCGCTGTGGAGATACTCTCT 58.706 52.381 4.30 0.00 42.95 3.10
900 1109 0.916086 TGTGGTTCTTGGTGTGAGGT 59.084 50.000 0.00 0.00 0.00 3.85
929 1156 1.132640 CTGCGCTTTTGGACGTAGC 59.867 57.895 9.73 0.00 35.33 3.58
995 1228 0.252479 CTGCTGCTTCCTCATCACCT 59.748 55.000 0.00 0.00 0.00 4.00
1186 1425 5.009510 CAGAGAGAGACAGAGACAAAGACAA 59.990 44.000 0.00 0.00 0.00 3.18
1204 1450 3.187227 CCATCAACCAAACGAACAGAGAG 59.813 47.826 0.00 0.00 0.00 3.20
1290 1577 1.106351 AGATCATGAGGCTCGTCGCT 61.106 55.000 6.18 1.57 39.13 4.93
1514 1801 3.374402 CGGAGACACCACTCGGCT 61.374 66.667 0.00 0.00 37.74 5.52
1959 2258 3.246403 GCAGAGCAGCCTCTTCTTT 57.754 52.632 0.00 0.00 46.16 2.52
2079 2378 1.115930 ACACCACCAGCTTCGTCTCT 61.116 55.000 0.00 0.00 0.00 3.10
2160 2463 2.291209 TGCCCTGCTTGATGAAGAAA 57.709 45.000 0.00 0.00 0.00 2.52
2248 2551 2.969238 GGTGGCGATCATGGCGAG 60.969 66.667 12.08 0.00 37.19 5.03
2745 3048 4.139234 GAGTACCGGGTGGCGACC 62.139 72.222 9.83 9.83 42.27 4.79
2889 3192 9.557338 GCTTAATTATCACGAACGATCTATACT 57.443 33.333 0.14 0.00 0.00 2.12
2972 3289 1.453155 AGTCCAAACCACATGATCGC 58.547 50.000 0.00 0.00 0.00 4.58
2978 3295 3.593442 TTCCTGAAGTCCAAACCACAT 57.407 42.857 0.00 0.00 0.00 3.21
3027 3345 0.036590 TAAGTGGTGCTGCATGCTGA 59.963 50.000 26.71 10.16 43.37 4.26
3117 3438 0.173481 TTTCTCTCGTGAGCCCATCG 59.827 55.000 9.63 0.00 40.03 3.84
3118 3439 1.646189 GTTTCTCTCGTGAGCCCATC 58.354 55.000 9.63 0.00 40.03 3.51
3119 3440 0.250513 GGTTTCTCTCGTGAGCCCAT 59.749 55.000 9.63 0.00 40.03 4.00
3120 3441 1.671742 GGTTTCTCTCGTGAGCCCA 59.328 57.895 9.63 0.00 40.03 5.36
3121 3442 1.079057 GGGTTTCTCTCGTGAGCCC 60.079 63.158 9.63 10.62 40.03 5.19
3122 3443 1.446272 CGGGTTTCTCTCGTGAGCC 60.446 63.158 9.63 5.49 40.03 4.70
3123 3444 4.170723 CGGGTTTCTCTCGTGAGC 57.829 61.111 9.63 0.00 40.03 4.26
3128 3449 2.506438 GCGGACGGGTTTCTCTCG 60.506 66.667 0.00 0.00 46.72 4.04
3129 3450 2.125633 GGCGGACGGGTTTCTCTC 60.126 66.667 0.00 0.00 0.00 3.20
3130 3451 4.065281 CGGCGGACGGGTTTCTCT 62.065 66.667 0.00 0.00 39.42 3.10
3140 3461 1.200948 ACTCAAGTAACTACGGCGGAC 59.799 52.381 13.24 0.70 0.00 4.79
3141 3462 1.200716 CACTCAAGTAACTACGGCGGA 59.799 52.381 13.24 0.00 0.00 5.54
3142 3463 1.625616 CACTCAAGTAACTACGGCGG 58.374 55.000 13.24 0.00 0.00 6.13
3178 3499 4.101741 ACTGAGCTCTAGACACACCTTTTT 59.898 41.667 16.19 0.00 0.00 1.94
3179 3500 3.643792 ACTGAGCTCTAGACACACCTTTT 59.356 43.478 16.19 0.00 0.00 2.27
3180 3501 3.235200 ACTGAGCTCTAGACACACCTTT 58.765 45.455 16.19 0.00 0.00 3.11
3181 3502 2.823154 GACTGAGCTCTAGACACACCTT 59.177 50.000 16.19 0.00 0.00 3.50
3182 3503 2.442413 GACTGAGCTCTAGACACACCT 58.558 52.381 16.19 0.00 0.00 4.00
3183 3504 1.131504 CGACTGAGCTCTAGACACACC 59.868 57.143 16.19 0.00 0.00 4.16
3184 3505 2.077627 TCGACTGAGCTCTAGACACAC 58.922 52.381 16.19 0.00 0.00 3.82
3185 3506 2.077627 GTCGACTGAGCTCTAGACACA 58.922 52.381 16.19 0.00 0.00 3.72
3186 3507 2.095213 CAGTCGACTGAGCTCTAGACAC 59.905 54.545 36.73 12.96 46.59 3.67
3187 3508 2.351455 CAGTCGACTGAGCTCTAGACA 58.649 52.381 36.73 3.70 46.59 3.41
3197 3518 6.481358 ACTTCGTTAAGTCTCAGTCGACTGA 61.481 44.000 38.24 38.24 45.13 3.41
3198 3519 3.808116 TCGTTAAGTCTCAGTCGACTG 57.192 47.619 34.76 34.76 43.14 3.51
3199 3520 3.814283 ACTTCGTTAAGTCTCAGTCGACT 59.186 43.478 13.58 13.58 42.42 4.18
3200 3521 4.144534 ACTTCGTTAAGTCTCAGTCGAC 57.855 45.455 7.70 7.70 42.42 4.20
3210 3531 8.417205 GTCACTCGACTGAGACTTCGTTAAGT 62.417 46.154 0.00 0.00 45.57 2.24
3211 3532 4.083961 TCACTCGACTGAGACTTCGTTAAG 60.084 45.833 0.00 0.00 45.57 1.85
3212 3533 3.811497 TCACTCGACTGAGACTTCGTTAA 59.189 43.478 0.00 0.00 45.57 2.01
3213 3534 3.186001 GTCACTCGACTGAGACTTCGTTA 59.814 47.826 0.00 0.00 45.57 3.18
3214 3535 2.031857 GTCACTCGACTGAGACTTCGTT 60.032 50.000 0.00 0.00 45.57 3.85
3215 3536 1.532007 GTCACTCGACTGAGACTTCGT 59.468 52.381 0.00 0.00 45.57 3.85
3216 3537 1.462705 CGTCACTCGACTGAGACTTCG 60.463 57.143 0.00 0.00 45.57 3.79
3217 3538 1.532007 ACGTCACTCGACTGAGACTTC 59.468 52.381 0.00 0.00 45.57 3.01
3218 3539 1.532007 GACGTCACTCGACTGAGACTT 59.468 52.381 11.55 0.00 45.57 3.01
3219 3540 1.149987 GACGTCACTCGACTGAGACT 58.850 55.000 11.55 0.00 45.57 3.24
3220 3541 0.866427 TGACGTCACTCGACTGAGAC 59.134 55.000 15.76 0.00 45.57 3.36
3221 3542 1.149148 CTGACGTCACTCGACTGAGA 58.851 55.000 15.76 0.00 45.57 3.27
3222 3543 3.991544 CGCTGACGTCACTCGACTGAG 62.992 61.905 23.39 9.77 42.86 3.35
3223 3544 1.574925 GCTGACGTCACTCGACTGA 59.425 57.895 15.76 0.00 42.86 3.41
3224 3545 1.794003 CGCTGACGTCACTCGACTG 60.794 63.158 23.39 11.05 42.86 3.51
3225 3546 2.556792 CGCTGACGTCACTCGACT 59.443 61.111 23.39 0.00 42.86 4.18
3248 3569 0.029567 CGTGCCGGTTGTAGCAAAAA 59.970 50.000 1.90 0.00 41.48 1.94
3249 3570 1.649815 CGTGCCGGTTGTAGCAAAA 59.350 52.632 1.90 0.00 41.48 2.44
3250 3571 2.255172 CCGTGCCGGTTGTAGCAAA 61.255 57.895 1.90 0.00 42.73 3.68
3251 3572 2.666862 CCGTGCCGGTTGTAGCAA 60.667 61.111 1.90 0.00 42.73 3.91
3268 3589 2.828128 GCCGCTTGTAGCATCCAGC 61.828 63.158 0.00 0.00 42.58 4.85
3269 3590 2.528743 CGCCGCTTGTAGCATCCAG 61.529 63.158 0.00 0.00 42.58 3.86
3270 3591 2.511373 CGCCGCTTGTAGCATCCA 60.511 61.111 0.00 0.00 42.58 3.41
3271 3592 2.202878 TCGCCGCTTGTAGCATCC 60.203 61.111 0.00 0.00 42.58 3.51
3272 3593 2.860628 CGTCGCCGCTTGTAGCATC 61.861 63.158 0.00 0.00 42.58 3.91
3273 3594 2.829043 TTCGTCGCCGCTTGTAGCAT 62.829 55.000 0.00 0.00 42.58 3.79
3274 3595 3.561217 TTCGTCGCCGCTTGTAGCA 62.561 57.895 0.00 0.00 42.58 3.49
3275 3596 1.893168 TTTTCGTCGCCGCTTGTAGC 61.893 55.000 0.00 0.00 38.02 3.58
3276 3597 0.509499 TTTTTCGTCGCCGCTTGTAG 59.491 50.000 0.00 0.00 0.00 2.74
3277 3598 1.136197 CATTTTTCGTCGCCGCTTGTA 60.136 47.619 0.00 0.00 0.00 2.41
3278 3599 0.385473 CATTTTTCGTCGCCGCTTGT 60.385 50.000 0.00 0.00 0.00 3.16
3279 3600 0.385473 ACATTTTTCGTCGCCGCTTG 60.385 50.000 0.00 0.00 0.00 4.01
3280 3601 0.309612 AACATTTTTCGTCGCCGCTT 59.690 45.000 0.00 0.00 0.00 4.68
3281 3602 0.385473 CAACATTTTTCGTCGCCGCT 60.385 50.000 0.00 0.00 0.00 5.52
3282 3603 1.929757 GCAACATTTTTCGTCGCCGC 61.930 55.000 0.00 0.00 0.00 6.53
3283 3604 1.652148 CGCAACATTTTTCGTCGCCG 61.652 55.000 0.00 0.00 0.00 6.46
3284 3605 0.384974 TCGCAACATTTTTCGTCGCC 60.385 50.000 0.00 0.00 0.00 5.54
3285 3606 1.314412 CATCGCAACATTTTTCGTCGC 59.686 47.619 0.00 0.00 0.00 5.19
3286 3607 1.904412 CCATCGCAACATTTTTCGTCG 59.096 47.619 0.00 0.00 0.00 5.12
3287 3608 2.928694 ACCATCGCAACATTTTTCGTC 58.071 42.857 0.00 0.00 0.00 4.20
3288 3609 4.695217 ATACCATCGCAACATTTTTCGT 57.305 36.364 0.00 0.00 0.00 3.85
3289 3610 4.259371 GCAATACCATCGCAACATTTTTCG 60.259 41.667 0.00 0.00 0.00 3.46
3290 3611 4.624882 TGCAATACCATCGCAACATTTTTC 59.375 37.500 0.00 0.00 31.46 2.29
3291 3612 4.564041 TGCAATACCATCGCAACATTTTT 58.436 34.783 0.00 0.00 31.46 1.94
3292 3613 4.185467 TGCAATACCATCGCAACATTTT 57.815 36.364 0.00 0.00 31.46 1.82
3293 3614 3.865011 TGCAATACCATCGCAACATTT 57.135 38.095 0.00 0.00 31.46 2.32
3294 3615 3.772932 CTTGCAATACCATCGCAACATT 58.227 40.909 0.00 0.00 40.54 2.71
3295 3616 2.480073 GCTTGCAATACCATCGCAACAT 60.480 45.455 0.00 0.00 40.54 2.71
3296 3617 1.135431 GCTTGCAATACCATCGCAACA 60.135 47.619 0.00 0.00 40.54 3.33
3297 3618 1.135431 TGCTTGCAATACCATCGCAAC 60.135 47.619 0.00 0.00 40.54 4.17
3298 3619 1.172175 TGCTTGCAATACCATCGCAA 58.828 45.000 0.00 0.00 43.02 4.85
3299 3620 1.135431 GTTGCTTGCAATACCATCGCA 60.135 47.619 11.32 0.63 0.00 5.10
3300 3621 1.135431 TGTTGCTTGCAATACCATCGC 60.135 47.619 11.32 0.00 0.00 4.58
3301 3622 2.916716 GTTGTTGCTTGCAATACCATCG 59.083 45.455 11.32 0.00 0.00 3.84
3302 3623 3.911868 TGTTGTTGCTTGCAATACCATC 58.088 40.909 11.32 5.26 0.00 3.51
3303 3624 4.333913 TTGTTGTTGCTTGCAATACCAT 57.666 36.364 11.32 0.00 0.00 3.55
3304 3625 3.808466 TTGTTGTTGCTTGCAATACCA 57.192 38.095 11.32 4.85 0.00 3.25
3305 3626 6.777526 TTTATTGTTGTTGCTTGCAATACC 57.222 33.333 11.32 2.16 34.70 2.73
3306 3627 6.737750 GCATTTATTGTTGTTGCTTGCAATAC 59.262 34.615 11.32 12.39 34.70 1.89
3307 3628 6.649973 AGCATTTATTGTTGTTGCTTGCAATA 59.350 30.769 11.32 6.00 40.58 1.90
3308 3629 5.470777 AGCATTTATTGTTGTTGCTTGCAAT 59.529 32.000 11.32 0.00 40.58 3.56
3309 3630 4.815308 AGCATTTATTGTTGTTGCTTGCAA 59.185 33.333 3.70 3.70 40.58 4.08
3310 3631 4.378774 AGCATTTATTGTTGTTGCTTGCA 58.621 34.783 0.00 0.00 40.58 4.08
3311 3632 4.996062 AGCATTTATTGTTGTTGCTTGC 57.004 36.364 0.00 0.00 40.58 4.01
3312 3633 7.282916 GTTGTAGCATTTATTGTTGTTGCTTG 58.717 34.615 0.65 0.00 43.08 4.01
3313 3634 6.423604 GGTTGTAGCATTTATTGTTGTTGCTT 59.576 34.615 0.65 0.00 43.08 3.91
3314 3635 5.925969 GGTTGTAGCATTTATTGTTGTTGCT 59.074 36.000 1.08 1.08 45.10 3.91
3315 3636 5.164100 CGGTTGTAGCATTTATTGTTGTTGC 60.164 40.000 0.00 0.00 0.00 4.17
3316 3637 5.918011 ACGGTTGTAGCATTTATTGTTGTTG 59.082 36.000 0.00 0.00 0.00 3.33
3317 3638 6.079424 ACGGTTGTAGCATTTATTGTTGTT 57.921 33.333 0.00 0.00 0.00 2.83
3318 3639 5.699097 ACGGTTGTAGCATTTATTGTTGT 57.301 34.783 0.00 0.00 0.00 3.32
3319 3640 6.378582 AGAACGGTTGTAGCATTTATTGTTG 58.621 36.000 0.00 0.00 0.00 3.33
3320 3641 6.569179 AGAACGGTTGTAGCATTTATTGTT 57.431 33.333 0.00 0.00 0.00 2.83
3321 3642 6.569179 AAGAACGGTTGTAGCATTTATTGT 57.431 33.333 0.00 0.00 0.00 2.71
3322 3643 7.271223 CAGAAAGAACGGTTGTAGCATTTATTG 59.729 37.037 0.00 0.00 0.00 1.90
3323 3644 7.174253 TCAGAAAGAACGGTTGTAGCATTTATT 59.826 33.333 0.00 0.00 0.00 1.40
3324 3645 6.653320 TCAGAAAGAACGGTTGTAGCATTTAT 59.347 34.615 0.00 0.00 0.00 1.40
3325 3646 5.992829 TCAGAAAGAACGGTTGTAGCATTTA 59.007 36.000 0.00 0.00 0.00 1.40
3326 3647 4.819630 TCAGAAAGAACGGTTGTAGCATTT 59.180 37.500 0.00 0.00 0.00 2.32
3327 3648 4.385825 TCAGAAAGAACGGTTGTAGCATT 58.614 39.130 0.00 0.00 0.00 3.56
3328 3649 4.002906 TCAGAAAGAACGGTTGTAGCAT 57.997 40.909 0.00 0.00 0.00 3.79
3329 3650 3.462483 TCAGAAAGAACGGTTGTAGCA 57.538 42.857 0.00 0.00 0.00 3.49
3330 3651 4.806342 TTTCAGAAAGAACGGTTGTAGC 57.194 40.909 0.00 0.00 35.56 3.58
3331 3652 5.049405 AGCATTTCAGAAAGAACGGTTGTAG 60.049 40.000 0.00 0.00 35.56 2.74
3332 3653 4.819630 AGCATTTCAGAAAGAACGGTTGTA 59.180 37.500 0.00 0.00 35.56 2.41
3333 3654 3.632145 AGCATTTCAGAAAGAACGGTTGT 59.368 39.130 0.00 0.00 35.56 3.32
3334 3655 4.228912 AGCATTTCAGAAAGAACGGTTG 57.771 40.909 0.00 0.00 35.56 3.77
3335 3656 4.819630 TGTAGCATTTCAGAAAGAACGGTT 59.180 37.500 1.28 0.00 35.56 4.44
3336 3657 4.385825 TGTAGCATTTCAGAAAGAACGGT 58.614 39.130 1.28 0.00 35.56 4.83
3337 3658 5.147162 GTTGTAGCATTTCAGAAAGAACGG 58.853 41.667 1.28 0.00 35.56 4.44
3338 3659 5.147162 GGTTGTAGCATTTCAGAAAGAACG 58.853 41.667 1.28 0.00 35.56 3.95
3339 3660 5.147162 CGGTTGTAGCATTTCAGAAAGAAC 58.853 41.667 1.28 0.00 35.56 3.01
3340 3661 4.819630 ACGGTTGTAGCATTTCAGAAAGAA 59.180 37.500 1.28 0.00 0.00 2.52
3341 3662 4.385825 ACGGTTGTAGCATTTCAGAAAGA 58.614 39.130 1.28 0.00 0.00 2.52
3342 3663 4.213270 TGACGGTTGTAGCATTTCAGAAAG 59.787 41.667 1.28 0.00 0.00 2.62
3343 3664 4.130857 TGACGGTTGTAGCATTTCAGAAA 58.869 39.130 0.00 0.00 0.00 2.52
3344 3665 3.734463 TGACGGTTGTAGCATTTCAGAA 58.266 40.909 0.00 0.00 0.00 3.02
3345 3666 3.244078 ACTGACGGTTGTAGCATTTCAGA 60.244 43.478 2.83 0.00 34.41 3.27
3346 3667 3.067106 ACTGACGGTTGTAGCATTTCAG 58.933 45.455 0.00 0.00 36.02 3.02
3347 3668 2.805671 CACTGACGGTTGTAGCATTTCA 59.194 45.455 0.00 0.00 0.00 2.69
3348 3669 3.064207 TCACTGACGGTTGTAGCATTTC 58.936 45.455 0.00 0.00 0.00 2.17
3349 3670 3.120321 TCACTGACGGTTGTAGCATTT 57.880 42.857 0.00 0.00 0.00 2.32
3350 3671 2.831685 TCACTGACGGTTGTAGCATT 57.168 45.000 0.00 0.00 0.00 3.56
3351 3672 2.831685 TTCACTGACGGTTGTAGCAT 57.168 45.000 0.00 0.00 0.00 3.79
3352 3673 2.101750 TCTTTCACTGACGGTTGTAGCA 59.898 45.455 0.00 0.00 0.00 3.49
3353 3674 2.750948 TCTTTCACTGACGGTTGTAGC 58.249 47.619 0.00 0.00 0.00 3.58
3354 3675 4.307432 ACATCTTTCACTGACGGTTGTAG 58.693 43.478 0.00 0.00 0.00 2.74
3355 3676 4.330944 ACATCTTTCACTGACGGTTGTA 57.669 40.909 0.00 0.00 0.00 2.41
3356 3677 3.194005 ACATCTTTCACTGACGGTTGT 57.806 42.857 0.00 0.00 0.00 3.32
3357 3678 3.849645 GCAACATCTTTCACTGACGGTTG 60.850 47.826 0.00 0.00 36.25 3.77
3358 3679 2.290641 GCAACATCTTTCACTGACGGTT 59.709 45.455 0.00 0.00 0.00 4.44
3359 3680 1.873591 GCAACATCTTTCACTGACGGT 59.126 47.619 0.00 0.00 0.00 4.83
3360 3681 1.872952 TGCAACATCTTTCACTGACGG 59.127 47.619 0.00 0.00 0.00 4.79
3361 3682 3.291585 GTTGCAACATCTTTCACTGACG 58.708 45.455 24.52 0.00 0.00 4.35
3362 3683 3.632189 GGTTGCAACATCTTTCACTGAC 58.368 45.455 29.55 4.98 0.00 3.51
3363 3684 2.290367 CGGTTGCAACATCTTTCACTGA 59.710 45.455 29.55 0.00 0.00 3.41
3364 3685 2.605338 CCGGTTGCAACATCTTTCACTG 60.605 50.000 29.55 6.57 0.00 3.66
3365 3686 1.608590 CCGGTTGCAACATCTTTCACT 59.391 47.619 29.55 0.00 0.00 3.41
3366 3687 1.336755 ACCGGTTGCAACATCTTTCAC 59.663 47.619 29.55 9.73 0.00 3.18
3367 3688 1.336440 CACCGGTTGCAACATCTTTCA 59.664 47.619 29.55 0.00 0.00 2.69
3368 3689 1.606668 TCACCGGTTGCAACATCTTTC 59.393 47.619 29.55 11.15 0.00 2.62
3369 3690 1.608590 CTCACCGGTTGCAACATCTTT 59.391 47.619 29.55 7.20 0.00 2.52
3370 3691 1.202758 TCTCACCGGTTGCAACATCTT 60.203 47.619 29.55 8.98 0.00 2.40
3371 3692 0.396435 TCTCACCGGTTGCAACATCT 59.604 50.000 29.55 8.96 0.00 2.90
3372 3693 1.453155 ATCTCACCGGTTGCAACATC 58.547 50.000 29.55 13.31 0.00 3.06
3373 3694 2.747446 GTTATCTCACCGGTTGCAACAT 59.253 45.455 29.55 15.37 0.00 2.71
3374 3695 2.147958 GTTATCTCACCGGTTGCAACA 58.852 47.619 29.55 8.91 0.00 3.33
3375 3696 1.127951 CGTTATCTCACCGGTTGCAAC 59.872 52.381 21.59 21.59 0.00 4.17
3376 3697 1.270412 ACGTTATCTCACCGGTTGCAA 60.270 47.619 2.97 0.00 0.00 4.08
3377 3698 0.319083 ACGTTATCTCACCGGTTGCA 59.681 50.000 2.97 0.00 0.00 4.08
3378 3699 0.719465 CACGTTATCTCACCGGTTGC 59.281 55.000 2.97 0.00 0.00 4.17
3379 3700 0.719465 GCACGTTATCTCACCGGTTG 59.281 55.000 2.97 0.00 0.00 3.77
3380 3701 0.606604 AGCACGTTATCTCACCGGTT 59.393 50.000 2.97 0.00 0.00 4.44
3381 3702 1.133790 GTAGCACGTTATCTCACCGGT 59.866 52.381 0.00 0.00 0.00 5.28
3382 3703 1.133598 TGTAGCACGTTATCTCACCGG 59.866 52.381 0.00 0.00 0.00 5.28
3383 3704 2.554806 TGTAGCACGTTATCTCACCG 57.445 50.000 0.00 0.00 0.00 4.94
3384 3705 2.928116 GGTTGTAGCACGTTATCTCACC 59.072 50.000 0.00 0.00 0.00 4.02
3385 3706 2.597305 CGGTTGTAGCACGTTATCTCAC 59.403 50.000 0.00 0.00 0.00 3.51
3386 3707 2.416296 CCGGTTGTAGCACGTTATCTCA 60.416 50.000 0.00 0.00 0.00 3.27
3387 3708 2.190981 CCGGTTGTAGCACGTTATCTC 58.809 52.381 0.00 0.00 0.00 2.75
3388 3709 1.547372 ACCGGTTGTAGCACGTTATCT 59.453 47.619 0.00 0.00 0.00 1.98
3389 3710 1.657094 CACCGGTTGTAGCACGTTATC 59.343 52.381 2.97 0.00 0.00 1.75
3390 3711 1.273048 TCACCGGTTGTAGCACGTTAT 59.727 47.619 2.97 0.00 0.00 1.89
3391 3712 0.672889 TCACCGGTTGTAGCACGTTA 59.327 50.000 2.97 0.00 0.00 3.18
3392 3713 0.179078 TTCACCGGTTGTAGCACGTT 60.179 50.000 2.97 0.00 0.00 3.99
3393 3714 0.599204 CTTCACCGGTTGTAGCACGT 60.599 55.000 2.97 0.00 0.00 4.49
3394 3715 1.289109 CCTTCACCGGTTGTAGCACG 61.289 60.000 2.97 0.00 0.00 5.34
3395 3716 0.034337 TCCTTCACCGGTTGTAGCAC 59.966 55.000 2.97 0.00 0.00 4.40
3396 3717 0.034337 GTCCTTCACCGGTTGTAGCA 59.966 55.000 2.97 0.00 0.00 3.49
3397 3718 1.012486 CGTCCTTCACCGGTTGTAGC 61.012 60.000 2.97 0.00 0.00 3.58
3398 3719 0.389426 CCGTCCTTCACCGGTTGTAG 60.389 60.000 2.97 1.85 39.38 2.74
3399 3720 1.667151 CCGTCCTTCACCGGTTGTA 59.333 57.895 2.97 0.00 39.38 2.41
3400 3721 2.424302 CCGTCCTTCACCGGTTGT 59.576 61.111 2.97 0.00 39.38 3.32
3401 3722 3.047877 GCCGTCCTTCACCGGTTG 61.048 66.667 2.97 0.00 45.91 3.77
3402 3723 2.890766 ATGCCGTCCTTCACCGGTT 61.891 57.895 2.97 0.00 45.91 4.44
3403 3724 3.319198 ATGCCGTCCTTCACCGGT 61.319 61.111 0.00 0.00 45.91 5.28
3404 3725 2.819595 CATGCCGTCCTTCACCGG 60.820 66.667 0.00 0.00 46.90 5.28
3405 3726 2.572095 TAGCATGCCGTCCTTCACCG 62.572 60.000 15.66 0.00 0.00 4.94
3406 3727 1.090052 GTAGCATGCCGTCCTTCACC 61.090 60.000 15.66 0.00 0.00 4.02
3407 3728 0.391130 TGTAGCATGCCGTCCTTCAC 60.391 55.000 15.66 0.54 0.00 3.18
3408 3729 0.323302 TTGTAGCATGCCGTCCTTCA 59.677 50.000 15.66 0.00 0.00 3.02
3409 3730 0.727398 GTTGTAGCATGCCGTCCTTC 59.273 55.000 15.66 0.00 0.00 3.46
3410 3731 0.676782 GGTTGTAGCATGCCGTCCTT 60.677 55.000 15.66 0.00 0.00 3.36
3411 3732 1.078426 GGTTGTAGCATGCCGTCCT 60.078 57.895 15.66 0.00 0.00 3.85
3412 3733 0.958382 TTGGTTGTAGCATGCCGTCC 60.958 55.000 15.66 10.70 0.00 4.79
3413 3734 0.168128 GTTGGTTGTAGCATGCCGTC 59.832 55.000 15.66 5.73 0.00 4.79
3414 3735 0.536233 TGTTGGTTGTAGCATGCCGT 60.536 50.000 15.66 0.00 0.00 5.68
3415 3736 0.595588 TTGTTGGTTGTAGCATGCCG 59.404 50.000 15.66 0.00 0.00 5.69
3416 3737 1.339610 TGTTGTTGGTTGTAGCATGCC 59.660 47.619 15.66 0.00 0.00 4.40
3417 3738 2.791383 TGTTGTTGGTTGTAGCATGC 57.209 45.000 10.51 10.51 0.00 4.06
3418 3739 5.878332 TCTATGTTGTTGGTTGTAGCATG 57.122 39.130 0.00 0.00 0.00 4.06
3419 3740 5.945784 ACATCTATGTTGTTGGTTGTAGCAT 59.054 36.000 0.00 0.00 37.90 3.79
3420 3741 5.312895 ACATCTATGTTGTTGGTTGTAGCA 58.687 37.500 0.00 0.00 37.90 3.49
3421 3742 5.880054 ACATCTATGTTGTTGGTTGTAGC 57.120 39.130 0.00 0.00 37.90 3.58
3434 3755 4.937201 TCTATGGTCGCAACATCTATGT 57.063 40.909 0.00 0.00 44.20 2.29
3435 3756 6.603237 TTTTCTATGGTCGCAACATCTATG 57.397 37.500 0.00 0.00 0.00 2.23
3457 3778 3.252974 TGCCACGTTTCCAACATTTTT 57.747 38.095 0.00 0.00 0.00 1.94
3458 3779 2.969628 TGCCACGTTTCCAACATTTT 57.030 40.000 0.00 0.00 0.00 1.82
3459 3780 4.592485 TTATGCCACGTTTCCAACATTT 57.408 36.364 0.00 0.00 0.00 2.32
3460 3781 4.592485 TTTATGCCACGTTTCCAACATT 57.408 36.364 0.00 0.00 0.00 2.71
3461 3782 4.592485 TTTTATGCCACGTTTCCAACAT 57.408 36.364 0.00 0.00 0.00 2.71
3462 3783 4.202161 ACATTTTATGCCACGTTTCCAACA 60.202 37.500 0.00 0.00 0.00 3.33
3463 3784 4.303282 ACATTTTATGCCACGTTTCCAAC 58.697 39.130 0.00 0.00 0.00 3.77
3464 3785 4.592485 ACATTTTATGCCACGTTTCCAA 57.408 36.364 0.00 0.00 0.00 3.53
3465 3786 4.302455 CAACATTTTATGCCACGTTTCCA 58.698 39.130 0.00 0.00 0.00 3.53
3466 3787 3.122780 GCAACATTTTATGCCACGTTTCC 59.877 43.478 0.00 0.00 36.56 3.13
3467 3788 3.738282 TGCAACATTTTATGCCACGTTTC 59.262 39.130 0.00 0.00 41.87 2.78
3468 3789 3.722147 TGCAACATTTTATGCCACGTTT 58.278 36.364 0.00 0.00 41.87 3.60
3469 3790 3.377346 TGCAACATTTTATGCCACGTT 57.623 38.095 0.00 0.00 41.87 3.99
3470 3791 3.252400 CATGCAACATTTTATGCCACGT 58.748 40.909 0.00 0.00 41.87 4.49
3471 3792 2.604011 CCATGCAACATTTTATGCCACG 59.396 45.455 0.00 0.00 41.87 4.94
3472 3793 3.598299 ACCATGCAACATTTTATGCCAC 58.402 40.909 0.00 0.00 41.87 5.01
3473 3794 3.675502 CGACCATGCAACATTTTATGCCA 60.676 43.478 0.00 0.00 41.87 4.92
3474 3795 2.859538 CGACCATGCAACATTTTATGCC 59.140 45.455 0.00 0.00 41.87 4.40
3475 3796 3.547468 GTCGACCATGCAACATTTTATGC 59.453 43.478 3.51 0.00 42.86 3.14
3476 3797 4.794762 CAGTCGACCATGCAACATTTTATG 59.205 41.667 13.01 0.00 0.00 1.90
3477 3798 4.699735 TCAGTCGACCATGCAACATTTTAT 59.300 37.500 13.01 0.00 0.00 1.40
3478 3799 4.068599 TCAGTCGACCATGCAACATTTTA 58.931 39.130 13.01 0.00 0.00 1.52
3479 3800 2.884012 TCAGTCGACCATGCAACATTTT 59.116 40.909 13.01 0.00 0.00 1.82
3480 3801 2.485426 CTCAGTCGACCATGCAACATTT 59.515 45.455 13.01 0.00 0.00 2.32
3481 3802 2.079158 CTCAGTCGACCATGCAACATT 58.921 47.619 13.01 0.00 0.00 2.71
3482 3803 1.276138 TCTCAGTCGACCATGCAACAT 59.724 47.619 13.01 0.00 0.00 2.71
3483 3804 0.678950 TCTCAGTCGACCATGCAACA 59.321 50.000 13.01 0.00 0.00 3.33
3484 3805 1.071605 GTCTCAGTCGACCATGCAAC 58.928 55.000 13.01 3.16 0.00 4.17
3485 3806 0.969149 AGTCTCAGTCGACCATGCAA 59.031 50.000 13.01 0.00 34.46 4.08
3486 3807 0.969149 AAGTCTCAGTCGACCATGCA 59.031 50.000 13.01 0.00 34.46 3.96
3487 3808 1.354040 CAAGTCTCAGTCGACCATGC 58.646 55.000 13.01 0.00 34.46 4.06
3488 3809 1.273606 ACCAAGTCTCAGTCGACCATG 59.726 52.381 13.01 5.07 34.46 3.66
3489 3810 1.633774 ACCAAGTCTCAGTCGACCAT 58.366 50.000 13.01 0.00 34.46 3.55
3490 3811 1.410004 AACCAAGTCTCAGTCGACCA 58.590 50.000 13.01 0.00 34.46 4.02
3491 3812 3.655276 TTAACCAAGTCTCAGTCGACC 57.345 47.619 13.01 0.00 34.46 4.79
3492 3813 5.471257 AGATTTAACCAAGTCTCAGTCGAC 58.529 41.667 7.70 7.70 0.00 4.20
3493 3814 5.243060 TGAGATTTAACCAAGTCTCAGTCGA 59.757 40.000 8.09 0.00 46.61 4.20
3494 3815 5.470368 TGAGATTTAACCAAGTCTCAGTCG 58.530 41.667 8.09 0.00 46.61 4.18
3499 3820 5.573669 GTCGACTGAGATTTAACCAAGTCTC 59.426 44.000 8.70 3.67 44.01 3.36
3500 3821 5.244178 AGTCGACTGAGATTTAACCAAGTCT 59.756 40.000 19.30 0.00 33.74 3.24
3501 3822 5.346281 CAGTCGACTGAGATTTAACCAAGTC 59.654 44.000 36.73 0.00 46.59 3.01
3502 3823 5.230942 CAGTCGACTGAGATTTAACCAAGT 58.769 41.667 36.73 0.00 46.59 3.16
3503 3824 5.769967 CAGTCGACTGAGATTTAACCAAG 57.230 43.478 36.73 7.53 46.59 3.61
3516 3837 3.181516 GCCTGCTAAAAATCAGTCGACTG 60.182 47.826 34.76 34.76 45.08 3.51
3517 3838 3.003480 GCCTGCTAAAAATCAGTCGACT 58.997 45.455 13.58 13.58 0.00 4.18
3518 3839 2.096013 GGCCTGCTAAAAATCAGTCGAC 59.904 50.000 7.70 7.70 0.00 4.20
3519 3840 2.356135 GGCCTGCTAAAAATCAGTCGA 58.644 47.619 0.00 0.00 0.00 4.20
3520 3841 1.401905 GGGCCTGCTAAAAATCAGTCG 59.598 52.381 0.84 0.00 0.00 4.18
3521 3842 1.401905 CGGGCCTGCTAAAAATCAGTC 59.598 52.381 0.84 0.00 0.00 3.51
3522 3843 1.004277 TCGGGCCTGCTAAAAATCAGT 59.996 47.619 6.73 0.00 0.00 3.41
3523 3844 1.750193 TCGGGCCTGCTAAAAATCAG 58.250 50.000 6.73 0.00 0.00 2.90
3524 3845 2.208132 TTCGGGCCTGCTAAAAATCA 57.792 45.000 6.73 0.00 0.00 2.57
3525 3846 3.586100 TTTTCGGGCCTGCTAAAAATC 57.414 42.857 6.73 0.00 0.00 2.17
3546 3867 6.454795 TGAGTTCAAAAGCACTCAAGTTTTT 58.545 32.000 0.15 0.00 45.14 1.94
3547 3868 6.024552 TGAGTTCAAAAGCACTCAAGTTTT 57.975 33.333 0.15 0.00 45.14 2.43
3548 3869 5.643379 TGAGTTCAAAAGCACTCAAGTTT 57.357 34.783 0.15 0.00 45.14 2.66
3554 3875 8.857216 CATCAATTTATGAGTTCAAAAGCACTC 58.143 33.333 0.00 0.00 42.53 3.51
3555 3876 8.579006 TCATCAATTTATGAGTTCAAAAGCACT 58.421 29.630 0.00 0.00 42.53 4.40
3556 3877 8.746922 TCATCAATTTATGAGTTCAAAAGCAC 57.253 30.769 0.00 0.00 42.53 4.40
3557 3878 8.975410 CTCATCAATTTATGAGTTCAAAAGCA 57.025 30.769 17.87 0.00 45.19 3.91
3611 3932 2.858344 ACAACAACGAGTCAAACGAGAG 59.142 45.455 0.00 0.00 34.70 3.20
3612 3933 2.883574 ACAACAACGAGTCAAACGAGA 58.116 42.857 0.00 0.00 34.70 4.04
3727 4064 2.745515 AACTAGAAACGAGCCAGACC 57.254 50.000 0.00 0.00 0.00 3.85
3731 4068 3.056107 ACATGCTAACTAGAAACGAGCCA 60.056 43.478 0.00 0.00 31.98 4.75
3829 4166 4.448537 TTGGCCACTACACATATTTTGC 57.551 40.909 3.88 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.