Multiple sequence alignment - TraesCS5B01G495700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G495700 | chr5B | 100.000 | 6356 | 0 | 0 | 1 | 6356 | 662982316 | 662988671 | 0.000000e+00 | 11738.0 |
1 | TraesCS5B01G495700 | chr5B | 88.664 | 1385 | 102 | 20 | 936 | 2279 | 669216815 | 669215445 | 0.000000e+00 | 1637.0 |
2 | TraesCS5B01G495700 | chr5B | 83.134 | 1589 | 185 | 39 | 2487 | 4041 | 669215061 | 669213522 | 0.000000e+00 | 1373.0 |
3 | TraesCS5B01G495700 | chr5B | 88.128 | 438 | 43 | 6 | 180 | 617 | 669217640 | 669217212 | 4.390000e-141 | 512.0 |
4 | TraesCS5B01G495700 | chr5B | 93.056 | 72 | 4 | 1 | 6281 | 6352 | 45030114 | 45030044 | 3.130000e-18 | 104.0 |
5 | TraesCS5B01G495700 | chr5B | 100.000 | 31 | 0 | 0 | 6190 | 6220 | 639967866 | 639967836 | 2.480000e-04 | 58.4 |
6 | TraesCS5B01G495700 | chr5A | 93.308 | 4662 | 197 | 48 | 801 | 5413 | 654093894 | 654098489 | 0.000000e+00 | 6774.0 |
7 | TraesCS5B01G495700 | chr5A | 85.427 | 4076 | 387 | 104 | 936 | 4865 | 657768894 | 657764880 | 0.000000e+00 | 4045.0 |
8 | TraesCS5B01G495700 | chr5A | 91.592 | 666 | 46 | 8 | 68 | 728 | 654093120 | 654093780 | 0.000000e+00 | 911.0 |
9 | TraesCS5B01G495700 | chr5A | 87.677 | 495 | 47 | 5 | 4892 | 5386 | 657764031 | 657763551 | 1.200000e-156 | 564.0 |
10 | TraesCS5B01G495700 | chr5A | 90.503 | 358 | 20 | 7 | 5416 | 5762 | 654098522 | 654098876 | 1.610000e-125 | 460.0 |
11 | TraesCS5B01G495700 | chr5A | 82.840 | 169 | 19 | 8 | 6114 | 6277 | 657763041 | 657762878 | 6.640000e-30 | 143.0 |
12 | TraesCS5B01G495700 | chr5A | 94.737 | 76 | 4 | 0 | 6281 | 6356 | 567551472 | 567551547 | 1.120000e-22 | 119.0 |
13 | TraesCS5B01G495700 | chr5A | 92.105 | 76 | 6 | 0 | 6281 | 6356 | 1291428 | 1291353 | 2.420000e-19 | 108.0 |
14 | TraesCS5B01G495700 | chr5A | 90.411 | 73 | 6 | 1 | 6281 | 6353 | 666161492 | 666161563 | 1.890000e-15 | 95.3 |
15 | TraesCS5B01G495700 | chr5A | 87.097 | 62 | 7 | 1 | 5748 | 5809 | 2396864 | 2396924 | 1.140000e-07 | 69.4 |
16 | TraesCS5B01G495700 | chr5D | 93.117 | 2339 | 72 | 17 | 2295 | 4585 | 526915163 | 526917460 | 0.000000e+00 | 3345.0 |
17 | TraesCS5B01G495700 | chr5D | 91.741 | 1465 | 70 | 17 | 6 | 1430 | 526912605 | 526914058 | 0.000000e+00 | 1988.0 |
18 | TraesCS5B01G495700 | chr5D | 97.110 | 969 | 25 | 2 | 1298 | 2266 | 526914197 | 526915162 | 0.000000e+00 | 1631.0 |
19 | TraesCS5B01G495700 | chr5D | 90.880 | 1239 | 77 | 14 | 936 | 2142 | 529853022 | 529851788 | 0.000000e+00 | 1629.0 |
20 | TraesCS5B01G495700 | chr5D | 82.667 | 1650 | 194 | 44 | 2487 | 4081 | 529851139 | 529849527 | 0.000000e+00 | 1378.0 |
21 | TraesCS5B01G495700 | chr5D | 93.108 | 769 | 37 | 6 | 4658 | 5416 | 526917455 | 526918217 | 0.000000e+00 | 1112.0 |
22 | TraesCS5B01G495700 | chr5D | 87.598 | 508 | 55 | 6 | 4882 | 5386 | 529847727 | 529847225 | 3.300000e-162 | 582.0 |
23 | TraesCS5B01G495700 | chr5D | 87.654 | 486 | 48 | 6 | 4085 | 4561 | 529849436 | 529848954 | 7.200000e-154 | 555.0 |
24 | TraesCS5B01G495700 | chr5D | 85.827 | 127 | 15 | 1 | 6151 | 6277 | 526918721 | 526918844 | 1.440000e-26 | 132.0 |
25 | TraesCS5B01G495700 | chr5D | 91.781 | 73 | 5 | 1 | 6281 | 6353 | 58233323 | 58233394 | 4.050000e-17 | 100.0 |
26 | TraesCS5B01G495700 | chr5D | 83.036 | 112 | 12 | 4 | 6169 | 6277 | 529846642 | 529846535 | 1.890000e-15 | 95.3 |
27 | TraesCS5B01G495700 | chr5D | 100.000 | 31 | 0 | 0 | 6190 | 6220 | 509432265 | 509432235 | 2.480000e-04 | 58.4 |
28 | TraesCS5B01G495700 | chr2D | 94.444 | 72 | 4 | 0 | 6282 | 6353 | 83851714 | 83851785 | 1.870000e-20 | 111.0 |
29 | TraesCS5B01G495700 | chr1B | 93.056 | 72 | 5 | 0 | 6281 | 6352 | 429217071 | 429217142 | 8.720000e-19 | 106.0 |
30 | TraesCS5B01G495700 | chr2A | 91.781 | 73 | 6 | 0 | 6281 | 6353 | 17611460 | 17611532 | 1.130000e-17 | 102.0 |
31 | TraesCS5B01G495700 | chr6D | 89.474 | 76 | 8 | 0 | 6281 | 6356 | 269772469 | 269772544 | 5.250000e-16 | 97.1 |
32 | TraesCS5B01G495700 | chr3A | 86.585 | 82 | 8 | 3 | 5728 | 5809 | 667292703 | 667292625 | 3.160000e-13 | 87.9 |
33 | TraesCS5B01G495700 | chr4D | 76.271 | 177 | 26 | 9 | 5850 | 6011 | 433112592 | 433112417 | 5.280000e-11 | 80.5 |
34 | TraesCS5B01G495700 | chr3D | 97.059 | 34 | 0 | 1 | 5750 | 5783 | 579597061 | 579597029 | 8.900000e-04 | 56.5 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G495700 | chr5B | 662982316 | 662988671 | 6355 | False | 11738.00 | 11738 | 100.000000 | 1 | 6356 | 1 | chr5B.!!$F1 | 6355 |
1 | TraesCS5B01G495700 | chr5B | 669213522 | 669217640 | 4118 | True | 1174.00 | 1637 | 86.642000 | 180 | 4041 | 3 | chr5B.!!$R3 | 3861 |
2 | TraesCS5B01G495700 | chr5A | 654093120 | 654098876 | 5756 | False | 2715.00 | 6774 | 91.801000 | 68 | 5762 | 3 | chr5A.!!$F4 | 5694 |
3 | TraesCS5B01G495700 | chr5A | 657762878 | 657768894 | 6016 | True | 1584.00 | 4045 | 85.314667 | 936 | 6277 | 3 | chr5A.!!$R2 | 5341 |
4 | TraesCS5B01G495700 | chr5D | 526912605 | 526918844 | 6239 | False | 1641.60 | 3345 | 92.180600 | 6 | 6277 | 5 | chr5D.!!$F2 | 6271 |
5 | TraesCS5B01G495700 | chr5D | 529846535 | 529853022 | 6487 | True | 847.86 | 1629 | 86.367000 | 936 | 6277 | 5 | chr5D.!!$R2 | 5341 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
757 | 864 | 0.107703 | TTTGGCAGGTATGAGAGGCG | 60.108 | 55.000 | 0.0 | 0.0 | 0.00 | 5.52 | F |
981 | 1118 | 0.328258 | CAGACCAAACCCCTACCCAG | 59.672 | 60.000 | 0.0 | 0.0 | 0.00 | 4.45 | F |
982 | 1119 | 1.001269 | GACCAAACCCCTACCCAGC | 60.001 | 63.158 | 0.0 | 0.0 | 0.00 | 4.85 | F |
1786 | 2233 | 1.280710 | AGGATGCATTTACCACCGACA | 59.719 | 47.619 | 0.0 | 0.0 | 0.00 | 4.35 | F |
2986 | 3912 | 0.326264 | CCTTCACCCACTCTTCCTGG | 59.674 | 60.000 | 0.0 | 0.0 | 0.00 | 4.45 | F |
3652 | 4614 | 0.112995 | AAACCATCCTGAAGCCTGCA | 59.887 | 50.000 | 0.0 | 0.0 | 0.00 | 4.41 | F |
5101 | 7160 | 0.394938 | TTTGCTCTGTTCCCGTAGCA | 59.605 | 50.000 | 0.0 | 0.0 | 42.91 | 3.49 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1786 | 2233 | 0.608640 | ACCGCCTCGAACTTCTGAAT | 59.391 | 50.000 | 0.00 | 0.0 | 0.00 | 2.57 | R |
2465 | 3326 | 0.871722 | TGTAAACTGCATGACCGCAC | 59.128 | 50.000 | 0.00 | 0.0 | 36.86 | 5.34 | R |
2728 | 3651 | 5.389935 | CCAGATCTTAAGAACAAACGACTGC | 60.390 | 44.000 | 9.71 | 0.0 | 0.00 | 4.40 | R |
3048 | 3977 | 2.322161 | CTTGCTGGAAATGCTTTCACG | 58.678 | 47.619 | 9.75 | 0.0 | 41.43 | 4.35 | R |
4674 | 5887 | 3.324117 | CAAGATATGGCATCTGACTCCG | 58.676 | 50.000 | 1.65 | 0.0 | 0.00 | 4.63 | R |
5279 | 7338 | 0.526524 | CTTCATCTCGGCAGTCGACC | 60.527 | 60.000 | 13.01 | 0.0 | 43.74 | 4.79 | R |
6001 | 8392 | 0.033504 | TTTCGTTTCTGAGAGCGGCT | 59.966 | 50.000 | 0.00 | 0.0 | 0.00 | 5.52 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
102 | 103 | 5.069648 | ACAGACAAGATCAGACTTGAACAGA | 59.930 | 40.000 | 14.00 | 0.00 | 46.85 | 3.41 |
148 | 152 | 4.680440 | GCAAATCAACCCGCCAATAATTCT | 60.680 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
156 | 167 | 4.069304 | CCCGCCAATAATTCTTCGGATAA | 58.931 | 43.478 | 5.57 | 0.00 | 39.23 | 1.75 |
419 | 430 | 3.997064 | CTCCAGCTCGCGGTCCTTG | 62.997 | 68.421 | 6.13 | 0.00 | 0.00 | 3.61 |
422 | 433 | 3.303135 | AGCTCGCGGTCCTTGTCA | 61.303 | 61.111 | 6.13 | 0.00 | 0.00 | 3.58 |
479 | 490 | 3.978460 | GAAGGCCTCGAGGATCTTC | 57.022 | 57.895 | 32.71 | 32.71 | 38.66 | 2.87 |
570 | 581 | 2.004017 | CAGCCGCCGATTGTTTTACTA | 58.996 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
571 | 582 | 2.004733 | AGCCGCCGATTGTTTTACTAC | 58.995 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
588 | 599 | 0.170339 | TACTGCATGGTCGTCGTCTG | 59.830 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
589 | 600 | 2.432456 | TGCATGGTCGTCGTCTGC | 60.432 | 61.111 | 0.00 | 0.00 | 0.00 | 4.26 |
590 | 601 | 3.545481 | GCATGGTCGTCGTCTGCG | 61.545 | 66.667 | 0.00 | 0.00 | 39.92 | 5.18 |
757 | 864 | 0.107703 | TTTGGCAGGTATGAGAGGCG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
785 | 892 | 4.112634 | CGTATATATGGGAAGCGATGGTG | 58.887 | 47.826 | 0.00 | 0.00 | 0.00 | 4.17 |
815 | 935 | 0.899720 | TAGAACAGTAACTGGCCGGG | 59.100 | 55.000 | 18.00 | 5.11 | 35.51 | 5.73 |
932 | 1064 | 2.887783 | TGCATTTTTCTCCGCTTGGTAA | 59.112 | 40.909 | 0.00 | 0.00 | 0.00 | 2.85 |
934 | 1066 | 3.488489 | CATTTTTCTCCGCTTGGTAACG | 58.512 | 45.455 | 0.00 | 0.00 | 42.51 | 3.18 |
980 | 1117 | 1.137594 | CCAGACCAAACCCCTACCCA | 61.138 | 60.000 | 0.00 | 0.00 | 0.00 | 4.51 |
981 | 1118 | 0.328258 | CAGACCAAACCCCTACCCAG | 59.672 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
982 | 1119 | 1.001269 | GACCAAACCCCTACCCAGC | 60.001 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
983 | 1120 | 2.359011 | CCAAACCCCTACCCAGCC | 59.641 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
984 | 1121 | 2.359011 | CAAACCCCTACCCAGCCC | 59.641 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
985 | 1122 | 2.944954 | AAACCCCTACCCAGCCCC | 60.945 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
1779 | 2226 | 4.786425 | AGGAGAAGAAGGATGCATTTACC | 58.214 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
1780 | 2227 | 4.228210 | AGGAGAAGAAGGATGCATTTACCA | 59.772 | 41.667 | 0.00 | 0.00 | 0.00 | 3.25 |
1786 | 2233 | 1.280710 | AGGATGCATTTACCACCGACA | 59.719 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
1810 | 2257 | 3.530910 | AAGTTCGAGGCGGTGGTGG | 62.531 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
2203 | 2652 | 6.423905 | TCTCTCCATGTTTTTACTCTTTCACG | 59.576 | 38.462 | 0.00 | 0.00 | 0.00 | 4.35 |
2352 | 3194 | 9.613428 | CTCCATAGTTCAATATGTTTGGTCTTA | 57.387 | 33.333 | 0.00 | 0.00 | 32.27 | 2.10 |
2465 | 3326 | 7.601856 | TGTATGATCTTTTGCTTTGTTTAGGG | 58.398 | 34.615 | 0.00 | 0.00 | 0.00 | 3.53 |
2546 | 3445 | 6.533723 | CCTTTTACCTTTCTTGTTGTTTGTCC | 59.466 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
2579 | 3478 | 8.474831 | ACTTGTTTTACTGCTTGTTTCCTTAAT | 58.525 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
2700 | 3622 | 6.877322 | TGTCAGGTTAGATTAAGTAAACTGCC | 59.123 | 38.462 | 15.86 | 9.00 | 42.59 | 4.85 |
2986 | 3912 | 0.326264 | CCTTCACCCACTCTTCCTGG | 59.674 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3017 | 3946 | 9.788960 | AATTTCTTTAGTTCTTCTGTTGAACAC | 57.211 | 29.630 | 0.00 | 0.00 | 44.30 | 3.32 |
3048 | 3977 | 0.863119 | GCAAATCGGCGACTTCATGC | 60.863 | 55.000 | 13.76 | 14.59 | 0.00 | 4.06 |
3181 | 4124 | 4.223923 | AGTGCTCCTCTATTGCTAGTTTGT | 59.776 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
3400 | 4345 | 5.700402 | AAGTATTGTCCCTCAGTGCTTAT | 57.300 | 39.130 | 0.00 | 0.00 | 37.07 | 1.73 |
3652 | 4614 | 0.112995 | AAACCATCCTGAAGCCTGCA | 59.887 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
3655 | 4617 | 1.030488 | CCATCCTGAAGCCTGCACTG | 61.030 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
3686 | 4648 | 4.933330 | TGCTAATGAGACTAAACGGCTAG | 58.067 | 43.478 | 0.00 | 0.00 | 0.00 | 3.42 |
3854 | 4819 | 7.958674 | TCACAGCATGAAAAAGTAAAACAAAC | 58.041 | 30.769 | 0.00 | 0.00 | 39.69 | 2.93 |
4057 | 5029 | 9.472361 | TTTAGTACTCATCACAGTGTAGAAAAC | 57.528 | 33.333 | 0.00 | 1.94 | 0.00 | 2.43 |
4242 | 5303 | 1.199789 | CTCTAGCGTGCATTTTTGGCA | 59.800 | 47.619 | 0.00 | 0.00 | 39.32 | 4.92 |
4254 | 5315 | 4.496175 | GCATTTTTGGCAGTTGGTTTTCAG | 60.496 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
4351 | 5412 | 4.524316 | TTCACTCTGCCAATCCAAATTG | 57.476 | 40.909 | 0.00 | 0.00 | 41.69 | 2.32 |
4674 | 5887 | 5.796813 | AGCGCTTAAGATGTTTTTATCGAC | 58.203 | 37.500 | 2.64 | 0.00 | 32.33 | 4.20 |
4741 | 5961 | 5.733620 | AATTTTAGGGGCATGCAGATATG | 57.266 | 39.130 | 21.36 | 0.00 | 0.00 | 1.78 |
4760 | 5982 | 8.121086 | CAGATATGACTTGCTAGAAACAACATG | 58.879 | 37.037 | 1.04 | 0.00 | 0.00 | 3.21 |
4769 | 5993 | 7.750229 | TGCTAGAAACAACATGAAGAGAATT | 57.250 | 32.000 | 0.00 | 0.00 | 0.00 | 2.17 |
4795 | 6019 | 9.605955 | TTGTTGTCTAACATGTTCGAATTATTG | 57.394 | 29.630 | 15.85 | 0.00 | 45.56 | 1.90 |
5002 | 7060 | 5.258622 | CGATGCTAGAAAATTGAAAGACGG | 58.741 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
5048 | 7106 | 1.738099 | CACCGTTGAGAAGGAGGCG | 60.738 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
5099 | 7158 | 5.873179 | TTAAATTTGCTCTGTTCCCGTAG | 57.127 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
5100 | 7159 | 1.739067 | ATTTGCTCTGTTCCCGTAGC | 58.261 | 50.000 | 0.00 | 0.00 | 35.51 | 3.58 |
5101 | 7160 | 0.394938 | TTTGCTCTGTTCCCGTAGCA | 59.605 | 50.000 | 0.00 | 0.00 | 42.91 | 3.49 |
5102 | 7161 | 0.613260 | TTGCTCTGTTCCCGTAGCAT | 59.387 | 50.000 | 0.00 | 0.00 | 43.94 | 3.79 |
5134 | 7193 | 5.294306 | ACACGTAGCACCATCAGATAAATTG | 59.706 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
5346 | 7405 | 0.670546 | TAGCTTCGCTGTCAGCCAAC | 60.671 | 55.000 | 19.14 | 7.74 | 40.10 | 3.77 |
5374 | 7433 | 0.690762 | AGGCTGGTTACACGTTGGAT | 59.309 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5389 | 7448 | 4.202121 | ACGTTGGATGCGAGTTAGATGTAT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
5427 | 7516 | 3.678289 | TGCAGTGCATATTGAACAGAGT | 58.322 | 40.909 | 15.37 | 0.00 | 31.71 | 3.24 |
5435 | 7711 | 6.591834 | GTGCATATTGAACAGAGTGAGTAGTT | 59.408 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
5487 | 7764 | 1.739562 | GCTGTGTCTTGAGCTCCCG | 60.740 | 63.158 | 12.15 | 1.79 | 32.12 | 5.14 |
5504 | 7781 | 4.511826 | GCTCCCGATTTCATTACTAACAGG | 59.488 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
5544 | 7852 | 4.314440 | GGACAGCCCTCACGCACA | 62.314 | 66.667 | 0.00 | 0.00 | 0.00 | 4.57 |
5622 | 7960 | 0.815213 | AAACTGCAGCGACTCAGCAA | 60.815 | 50.000 | 15.27 | 0.00 | 36.74 | 3.91 |
5626 | 7964 | 2.959357 | GCAGCGACTCAGCAACACC | 61.959 | 63.158 | 0.00 | 0.00 | 40.15 | 4.16 |
5651 | 8042 | 5.273170 | CGTTCAATTCAACACACAGAACAT | 58.727 | 37.500 | 0.00 | 0.00 | 35.00 | 2.71 |
5670 | 8061 | 7.498900 | CAGAACATCACTTTTAGCATGGGTATA | 59.501 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
5680 | 8071 | 7.581213 | TTTAGCATGGGTATATGGACAAAAG | 57.419 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
5713 | 8104 | 0.183971 | TTTCGGCTCCCCAGTTGAAA | 59.816 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
5774 | 8165 | 7.681939 | TTTTCTGCGTGGAAGATATTTTAGT | 57.318 | 32.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5775 | 8166 | 6.662414 | TTCTGCGTGGAAGATATTTTAGTG | 57.338 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
5776 | 8167 | 4.570772 | TCTGCGTGGAAGATATTTTAGTGC | 59.429 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
5777 | 8168 | 3.308595 | TGCGTGGAAGATATTTTAGTGCG | 59.691 | 43.478 | 0.00 | 0.00 | 0.00 | 5.34 |
5778 | 8169 | 3.308866 | GCGTGGAAGATATTTTAGTGCGT | 59.691 | 43.478 | 0.00 | 0.00 | 0.00 | 5.24 |
5779 | 8170 | 4.782195 | GCGTGGAAGATATTTTAGTGCGTG | 60.782 | 45.833 | 0.00 | 0.00 | 0.00 | 5.34 |
5780 | 8171 | 4.565166 | CGTGGAAGATATTTTAGTGCGTGA | 59.435 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
5781 | 8172 | 5.276395 | CGTGGAAGATATTTTAGTGCGTGAG | 60.276 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5782 | 8173 | 5.006746 | GTGGAAGATATTTTAGTGCGTGAGG | 59.993 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5783 | 8174 | 5.116882 | GGAAGATATTTTAGTGCGTGAGGT | 58.883 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
5784 | 8175 | 5.234543 | GGAAGATATTTTAGTGCGTGAGGTC | 59.765 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5785 | 8176 | 5.599999 | AGATATTTTAGTGCGTGAGGTCT | 57.400 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
5786 | 8177 | 5.352284 | AGATATTTTAGTGCGTGAGGTCTG | 58.648 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
5787 | 8178 | 1.508632 | TTTTAGTGCGTGAGGTCTGC | 58.491 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
5788 | 8179 | 0.679505 | TTTAGTGCGTGAGGTCTGCT | 59.320 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
5789 | 8180 | 0.243907 | TTAGTGCGTGAGGTCTGCTC | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
5790 | 8181 | 1.595993 | TAGTGCGTGAGGTCTGCTCC | 61.596 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
5791 | 8182 | 2.917227 | TGCGTGAGGTCTGCTCCA | 60.917 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
5792 | 8183 | 2.343758 | GCGTGAGGTCTGCTCCAA | 59.656 | 61.111 | 0.00 | 0.00 | 0.00 | 3.53 |
5793 | 8184 | 1.301716 | GCGTGAGGTCTGCTCCAAA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 3.28 |
5794 | 8185 | 0.674895 | GCGTGAGGTCTGCTCCAAAT | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
5795 | 8186 | 1.813513 | CGTGAGGTCTGCTCCAAATT | 58.186 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
5796 | 8187 | 2.154462 | CGTGAGGTCTGCTCCAAATTT | 58.846 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
5797 | 8188 | 2.160417 | CGTGAGGTCTGCTCCAAATTTC | 59.840 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
5798 | 8189 | 3.149196 | GTGAGGTCTGCTCCAAATTTCA | 58.851 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
5799 | 8190 | 3.760684 | GTGAGGTCTGCTCCAAATTTCAT | 59.239 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
5800 | 8191 | 4.012374 | TGAGGTCTGCTCCAAATTTCATC | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
5801 | 8192 | 3.012518 | AGGTCTGCTCCAAATTTCATCG | 58.987 | 45.455 | 0.00 | 0.00 | 0.00 | 3.84 |
5802 | 8193 | 2.478539 | GGTCTGCTCCAAATTTCATCGC | 60.479 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
5803 | 8194 | 2.162208 | GTCTGCTCCAAATTTCATCGCA | 59.838 | 45.455 | 0.00 | 0.00 | 0.00 | 5.10 |
5804 | 8195 | 3.018856 | TCTGCTCCAAATTTCATCGCAT | 58.981 | 40.909 | 0.00 | 0.00 | 0.00 | 4.73 |
5805 | 8196 | 3.444742 | TCTGCTCCAAATTTCATCGCATT | 59.555 | 39.130 | 0.00 | 0.00 | 0.00 | 3.56 |
5806 | 8197 | 4.082081 | TCTGCTCCAAATTTCATCGCATTT | 60.082 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
5807 | 8198 | 3.927758 | TGCTCCAAATTTCATCGCATTTG | 59.072 | 39.130 | 0.00 | 0.00 | 39.25 | 2.32 |
5811 | 8202 | 4.587211 | CAAATTTCATCGCATTTGGGTG | 57.413 | 40.909 | 0.00 | 0.00 | 36.93 | 4.61 |
5812 | 8203 | 2.298411 | ATTTCATCGCATTTGGGTGC | 57.702 | 45.000 | 0.00 | 0.00 | 41.65 | 5.01 |
5813 | 8204 | 0.964700 | TTTCATCGCATTTGGGTGCA | 59.035 | 45.000 | 0.00 | 0.00 | 45.30 | 4.57 |
5814 | 8205 | 1.184431 | TTCATCGCATTTGGGTGCAT | 58.816 | 45.000 | 0.00 | 0.00 | 45.30 | 3.96 |
5815 | 8206 | 0.456628 | TCATCGCATTTGGGTGCATG | 59.543 | 50.000 | 0.00 | 0.00 | 45.30 | 4.06 |
5816 | 8207 | 0.456628 | CATCGCATTTGGGTGCATGA | 59.543 | 50.000 | 0.00 | 0.00 | 45.30 | 3.07 |
5817 | 8208 | 1.135053 | CATCGCATTTGGGTGCATGAA | 60.135 | 47.619 | 0.00 | 0.00 | 45.30 | 2.57 |
5818 | 8209 | 0.243365 | TCGCATTTGGGTGCATGAAC | 59.757 | 50.000 | 0.00 | 0.00 | 45.30 | 3.18 |
5819 | 8210 | 0.038435 | CGCATTTGGGTGCATGAACA | 60.038 | 50.000 | 6.08 | 0.00 | 45.30 | 3.18 |
5820 | 8211 | 1.717194 | GCATTTGGGTGCATGAACAG | 58.283 | 50.000 | 6.08 | 0.00 | 44.43 | 3.16 |
5821 | 8212 | 1.001181 | GCATTTGGGTGCATGAACAGT | 59.999 | 47.619 | 6.08 | 0.00 | 44.43 | 3.55 |
5822 | 8213 | 2.230992 | GCATTTGGGTGCATGAACAGTA | 59.769 | 45.455 | 6.08 | 0.00 | 44.43 | 2.74 |
5823 | 8214 | 3.305950 | GCATTTGGGTGCATGAACAGTAA | 60.306 | 43.478 | 6.08 | 0.00 | 44.43 | 2.24 |
5824 | 8215 | 4.798924 | GCATTTGGGTGCATGAACAGTAAA | 60.799 | 41.667 | 6.08 | 4.17 | 44.43 | 2.01 |
5825 | 8216 | 4.314740 | TTTGGGTGCATGAACAGTAAAC | 57.685 | 40.909 | 6.08 | 0.00 | 0.00 | 2.01 |
5826 | 8217 | 3.222173 | TGGGTGCATGAACAGTAAACT | 57.778 | 42.857 | 6.08 | 0.00 | 0.00 | 2.66 |
5827 | 8218 | 3.561143 | TGGGTGCATGAACAGTAAACTT | 58.439 | 40.909 | 6.08 | 0.00 | 0.00 | 2.66 |
5828 | 8219 | 3.957497 | TGGGTGCATGAACAGTAAACTTT | 59.043 | 39.130 | 6.08 | 0.00 | 0.00 | 2.66 |
5829 | 8220 | 4.404073 | TGGGTGCATGAACAGTAAACTTTT | 59.596 | 37.500 | 6.08 | 0.00 | 0.00 | 2.27 |
5830 | 8221 | 5.105146 | TGGGTGCATGAACAGTAAACTTTTT | 60.105 | 36.000 | 6.08 | 0.00 | 0.00 | 1.94 |
5850 | 8241 | 6.627395 | TTTTTCACATACCTCGATTGTGTT | 57.373 | 33.333 | 13.93 | 0.00 | 41.14 | 3.32 |
5851 | 8242 | 6.627395 | TTTTCACATACCTCGATTGTGTTT | 57.373 | 33.333 | 13.93 | 0.00 | 41.14 | 2.83 |
5852 | 8243 | 6.627395 | TTTCACATACCTCGATTGTGTTTT | 57.373 | 33.333 | 13.93 | 0.00 | 41.14 | 2.43 |
5853 | 8244 | 6.627395 | TTCACATACCTCGATTGTGTTTTT | 57.373 | 33.333 | 13.93 | 0.00 | 41.14 | 1.94 |
5883 | 8274 | 6.674694 | AAGAGCTGCTTAGATGTACAAATG | 57.325 | 37.500 | 2.53 | 0.00 | 34.31 | 2.32 |
5884 | 8275 | 5.121811 | AGAGCTGCTTAGATGTACAAATGG | 58.878 | 41.667 | 2.53 | 0.00 | 0.00 | 3.16 |
5885 | 8276 | 5.102953 | AGCTGCTTAGATGTACAAATGGA | 57.897 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
5886 | 8277 | 4.878397 | AGCTGCTTAGATGTACAAATGGAC | 59.122 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
5887 | 8278 | 4.878397 | GCTGCTTAGATGTACAAATGGACT | 59.122 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
5888 | 8279 | 6.049149 | GCTGCTTAGATGTACAAATGGACTA | 58.951 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
5889 | 8280 | 6.538742 | GCTGCTTAGATGTACAAATGGACTAA | 59.461 | 38.462 | 0.00 | 3.37 | 0.00 | 2.24 |
5890 | 8281 | 7.065803 | GCTGCTTAGATGTACAAATGGACTAAA | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
5891 | 8282 | 8.856153 | TGCTTAGATGTACAAATGGACTAAAA | 57.144 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
5892 | 8283 | 9.461312 | TGCTTAGATGTACAAATGGACTAAAAT | 57.539 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
5897 | 8288 | 9.010029 | AGATGTACAAATGGACTAAAATTTCGT | 57.990 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
5903 | 8294 | 9.620660 | ACAAATGGACTAAAATTTCGTATGAAC | 57.379 | 29.630 | 0.00 | 0.00 | 32.71 | 3.18 |
5904 | 8295 | 9.072294 | CAAATGGACTAAAATTTCGTATGAACC | 57.928 | 33.333 | 0.00 | 0.00 | 32.71 | 3.62 |
5905 | 8296 | 8.575649 | AATGGACTAAAATTTCGTATGAACCT | 57.424 | 30.769 | 0.00 | 0.00 | 32.71 | 3.50 |
5906 | 8297 | 7.605410 | TGGACTAAAATTTCGTATGAACCTC | 57.395 | 36.000 | 0.00 | 0.00 | 32.71 | 3.85 |
5907 | 8298 | 7.162761 | TGGACTAAAATTTCGTATGAACCTCA | 58.837 | 34.615 | 0.00 | 0.00 | 32.71 | 3.86 |
5908 | 8299 | 7.118680 | TGGACTAAAATTTCGTATGAACCTCAC | 59.881 | 37.037 | 0.00 | 0.00 | 32.71 | 3.51 |
5909 | 8300 | 7.057149 | ACTAAAATTTCGTATGAACCTCACG | 57.943 | 36.000 | 0.00 | 0.00 | 37.03 | 4.35 |
5910 | 8301 | 4.336532 | AAATTTCGTATGAACCTCACGC | 57.663 | 40.909 | 0.00 | 0.00 | 35.70 | 5.34 |
5911 | 8302 | 2.442212 | TTTCGTATGAACCTCACGCA | 57.558 | 45.000 | 0.00 | 0.00 | 35.70 | 5.24 |
5912 | 8303 | 1.705256 | TTCGTATGAACCTCACGCAC | 58.295 | 50.000 | 0.00 | 0.00 | 35.70 | 5.34 |
5913 | 8304 | 0.885879 | TCGTATGAACCTCACGCACT | 59.114 | 50.000 | 0.00 | 0.00 | 35.70 | 4.40 |
5914 | 8305 | 2.086094 | TCGTATGAACCTCACGCACTA | 58.914 | 47.619 | 0.00 | 0.00 | 35.70 | 2.74 |
5915 | 8306 | 2.488937 | TCGTATGAACCTCACGCACTAA | 59.511 | 45.455 | 0.00 | 0.00 | 35.70 | 2.24 |
5916 | 8307 | 2.597305 | CGTATGAACCTCACGCACTAAC | 59.403 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
5917 | 8308 | 2.831685 | ATGAACCTCACGCACTAACA | 57.168 | 45.000 | 0.00 | 0.00 | 0.00 | 2.41 |
5918 | 8309 | 1.860676 | TGAACCTCACGCACTAACAC | 58.139 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
5919 | 8310 | 1.137282 | TGAACCTCACGCACTAACACA | 59.863 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
5920 | 8311 | 2.224185 | TGAACCTCACGCACTAACACAT | 60.224 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
5921 | 8312 | 2.080286 | ACCTCACGCACTAACACATC | 57.920 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
5922 | 8313 | 1.618837 | ACCTCACGCACTAACACATCT | 59.381 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
5923 | 8314 | 2.037251 | ACCTCACGCACTAACACATCTT | 59.963 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
5924 | 8315 | 2.668457 | CCTCACGCACTAACACATCTTC | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
5925 | 8316 | 2.668457 | CTCACGCACTAACACATCTTCC | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
5926 | 8317 | 2.036604 | TCACGCACTAACACATCTTCCA | 59.963 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
5927 | 8318 | 3.002791 | CACGCACTAACACATCTTCCAT | 58.997 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
5928 | 8319 | 3.002791 | ACGCACTAACACATCTTCCATG | 58.997 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
5929 | 8320 | 2.352651 | CGCACTAACACATCTTCCATGG | 59.647 | 50.000 | 4.97 | 4.97 | 0.00 | 3.66 |
5930 | 8321 | 3.609853 | GCACTAACACATCTTCCATGGA | 58.390 | 45.455 | 11.44 | 11.44 | 0.00 | 3.41 |
5931 | 8322 | 4.009675 | GCACTAACACATCTTCCATGGAA | 58.990 | 43.478 | 25.53 | 25.53 | 0.00 | 3.53 |
5932 | 8323 | 4.458989 | GCACTAACACATCTTCCATGGAAA | 59.541 | 41.667 | 26.87 | 17.85 | 33.34 | 3.13 |
5933 | 8324 | 5.048083 | GCACTAACACATCTTCCATGGAAAA | 60.048 | 40.000 | 26.87 | 16.21 | 33.34 | 2.29 |
5934 | 8325 | 6.516527 | GCACTAACACATCTTCCATGGAAAAA | 60.517 | 38.462 | 26.87 | 18.32 | 33.34 | 1.94 |
5970 | 8361 | 8.801715 | TTTCTTGATCTTTTTACTGTTCATGC | 57.198 | 30.769 | 0.00 | 0.00 | 0.00 | 4.06 |
5971 | 8362 | 7.509141 | TCTTGATCTTTTTACTGTTCATGCA | 57.491 | 32.000 | 0.00 | 0.00 | 0.00 | 3.96 |
5972 | 8363 | 7.362662 | TCTTGATCTTTTTACTGTTCATGCAC | 58.637 | 34.615 | 0.00 | 0.00 | 0.00 | 4.57 |
5973 | 8364 | 6.631971 | TGATCTTTTTACTGTTCATGCACA | 57.368 | 33.333 | 0.00 | 0.00 | 0.00 | 4.57 |
5974 | 8365 | 7.036996 | TGATCTTTTTACTGTTCATGCACAA | 57.963 | 32.000 | 0.00 | 0.00 | 0.00 | 3.33 |
5975 | 8366 | 7.140705 | TGATCTTTTTACTGTTCATGCACAAG | 58.859 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
5976 | 8367 | 6.691754 | TCTTTTTACTGTTCATGCACAAGA | 57.308 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
5977 | 8368 | 6.728200 | TCTTTTTACTGTTCATGCACAAGAG | 58.272 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5978 | 8369 | 4.488126 | TTTACTGTTCATGCACAAGAGC | 57.512 | 40.909 | 0.00 | 0.00 | 0.00 | 4.09 |
5986 | 8377 | 2.850439 | TGCACAAGAGCAGATGAGC | 58.150 | 52.632 | 0.00 | 0.00 | 40.11 | 4.26 |
5993 | 8384 | 4.674306 | AGCAGATGAGCTCTCGGA | 57.326 | 55.556 | 16.19 | 0.00 | 42.18 | 4.55 |
5994 | 8385 | 2.417978 | AGCAGATGAGCTCTCGGAG | 58.582 | 57.895 | 16.19 | 0.00 | 42.18 | 4.63 |
6004 | 8395 | 3.297391 | CTCTCGGAGCCATTTAGCC | 57.703 | 57.895 | 0.00 | 0.00 | 0.00 | 3.93 |
6005 | 8396 | 0.598680 | CTCTCGGAGCCATTTAGCCG | 60.599 | 60.000 | 0.00 | 0.00 | 44.83 | 5.52 |
6006 | 8397 | 2.203015 | TCGGAGCCATTTAGCCGC | 60.203 | 61.111 | 0.00 | 0.00 | 43.26 | 6.53 |
6007 | 8398 | 2.203070 | CGGAGCCATTTAGCCGCT | 60.203 | 61.111 | 0.00 | 0.00 | 37.08 | 5.52 |
6008 | 8399 | 2.247437 | CGGAGCCATTTAGCCGCTC | 61.247 | 63.158 | 0.00 | 0.00 | 46.67 | 5.03 |
6009 | 8400 | 1.147153 | GGAGCCATTTAGCCGCTCT | 59.853 | 57.895 | 0.00 | 0.00 | 46.60 | 4.09 |
6010 | 8401 | 0.882484 | GGAGCCATTTAGCCGCTCTC | 60.882 | 60.000 | 0.00 | 0.00 | 46.60 | 3.20 |
6011 | 8402 | 0.179073 | GAGCCATTTAGCCGCTCTCA | 60.179 | 55.000 | 0.00 | 0.00 | 44.52 | 3.27 |
6012 | 8403 | 0.179062 | AGCCATTTAGCCGCTCTCAG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.35 |
6020 | 8411 | 0.033504 | AGCCGCTCTCAGAAACGAAA | 59.966 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
6028 | 8419 | 4.633565 | GCTCTCAGAAACGAAAGGATCATT | 59.366 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
6037 | 8428 | 1.064654 | GAAAGGATCATTCAGCGTGCC | 59.935 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
6038 | 8429 | 1.091771 | AAGGATCATTCAGCGTGCCG | 61.092 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
6039 | 8430 | 2.537560 | GGATCATTCAGCGTGCCGG | 61.538 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
6040 | 8431 | 3.173390 | GATCATTCAGCGTGCCGGC | 62.173 | 63.158 | 22.73 | 22.73 | 0.00 | 6.13 |
6041 | 8432 | 3.687321 | ATCATTCAGCGTGCCGGCT | 62.687 | 57.895 | 29.70 | 3.37 | 46.13 | 5.52 |
6062 | 8453 | 3.470888 | CCGCCATCCTCCGTCCTT | 61.471 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
6063 | 8454 | 2.202932 | CGCCATCCTCCGTCCTTG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 3.61 |
6064 | 8455 | 2.721167 | CGCCATCCTCCGTCCTTGA | 61.721 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
6065 | 8456 | 1.153349 | GCCATCCTCCGTCCTTGAC | 60.153 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
6066 | 8457 | 1.899437 | GCCATCCTCCGTCCTTGACA | 61.899 | 60.000 | 0.00 | 0.00 | 32.09 | 3.58 |
6067 | 8458 | 0.613260 | CCATCCTCCGTCCTTGACAA | 59.387 | 55.000 | 0.00 | 0.00 | 32.09 | 3.18 |
6068 | 8459 | 1.003118 | CCATCCTCCGTCCTTGACAAA | 59.997 | 52.381 | 0.00 | 0.00 | 32.09 | 2.83 |
6069 | 8460 | 2.350522 | CATCCTCCGTCCTTGACAAAG | 58.649 | 52.381 | 0.00 | 0.00 | 32.09 | 2.77 |
6080 | 8471 | 2.084546 | CTTGACAAAGGATTCCCGTCC | 58.915 | 52.381 | 12.52 | 0.00 | 38.62 | 4.79 |
6081 | 8472 | 1.060729 | TGACAAAGGATTCCCGTCCA | 58.939 | 50.000 | 12.52 | 0.00 | 40.90 | 4.02 |
6082 | 8473 | 1.003118 | TGACAAAGGATTCCCGTCCAG | 59.997 | 52.381 | 12.52 | 0.00 | 40.90 | 3.86 |
6083 | 8474 | 0.322546 | ACAAAGGATTCCCGTCCAGC | 60.323 | 55.000 | 0.00 | 0.00 | 40.90 | 4.85 |
6084 | 8475 | 1.032114 | CAAAGGATTCCCGTCCAGCC | 61.032 | 60.000 | 0.00 | 0.00 | 40.90 | 4.85 |
6085 | 8476 | 1.497309 | AAAGGATTCCCGTCCAGCCA | 61.497 | 55.000 | 0.00 | 0.00 | 40.90 | 4.75 |
6086 | 8477 | 1.281925 | AAGGATTCCCGTCCAGCCAT | 61.282 | 55.000 | 0.00 | 0.00 | 40.90 | 4.40 |
6087 | 8478 | 1.526917 | GGATTCCCGTCCAGCCATG | 60.527 | 63.158 | 0.00 | 0.00 | 38.20 | 3.66 |
6088 | 8479 | 2.124151 | ATTCCCGTCCAGCCATGC | 60.124 | 61.111 | 0.00 | 0.00 | 0.00 | 4.06 |
6089 | 8480 | 2.615227 | GATTCCCGTCCAGCCATGCT | 62.615 | 60.000 | 0.00 | 0.00 | 40.77 | 3.79 |
6099 | 8490 | 2.575108 | AGCCATGCTGTCATGTTGG | 58.425 | 52.632 | 9.91 | 0.00 | 46.64 | 3.77 |
6100 | 8491 | 0.038599 | AGCCATGCTGTCATGTTGGA | 59.961 | 50.000 | 9.91 | 0.00 | 46.64 | 3.53 |
6101 | 8492 | 0.454600 | GCCATGCTGTCATGTTGGAG | 59.545 | 55.000 | 9.91 | 0.00 | 46.64 | 3.86 |
6102 | 8493 | 1.951895 | GCCATGCTGTCATGTTGGAGA | 60.952 | 52.381 | 9.91 | 0.00 | 46.64 | 3.71 |
6103 | 8494 | 2.014857 | CCATGCTGTCATGTTGGAGAG | 58.985 | 52.381 | 9.91 | 0.00 | 46.64 | 3.20 |
6104 | 8495 | 2.014857 | CATGCTGTCATGTTGGAGAGG | 58.985 | 52.381 | 0.00 | 0.00 | 43.85 | 3.69 |
6105 | 8496 | 0.321919 | TGCTGTCATGTTGGAGAGGC | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
6106 | 8497 | 1.028868 | GCTGTCATGTTGGAGAGGCC | 61.029 | 60.000 | 0.00 | 0.00 | 37.10 | 5.19 |
6107 | 8498 | 0.742281 | CTGTCATGTTGGAGAGGCCG | 60.742 | 60.000 | 0.00 | 0.00 | 40.66 | 6.13 |
6108 | 8499 | 1.296715 | GTCATGTTGGAGAGGCCGT | 59.703 | 57.895 | 0.00 | 0.00 | 40.66 | 5.68 |
6109 | 8500 | 0.741221 | GTCATGTTGGAGAGGCCGTC | 60.741 | 60.000 | 0.00 | 0.00 | 40.66 | 4.79 |
6110 | 8501 | 1.191489 | TCATGTTGGAGAGGCCGTCA | 61.191 | 55.000 | 10.03 | 0.00 | 40.66 | 4.35 |
6111 | 8502 | 1.021390 | CATGTTGGAGAGGCCGTCAC | 61.021 | 60.000 | 10.03 | 1.54 | 40.66 | 3.67 |
6112 | 8503 | 2.432628 | GTTGGAGAGGCCGTCACG | 60.433 | 66.667 | 10.03 | 0.00 | 40.66 | 4.35 |
6131 | 8522 | 1.441016 | GCGCGCTTTCTGAAGGTTG | 60.441 | 57.895 | 26.67 | 0.00 | 33.34 | 3.77 |
6136 | 8527 | 0.875059 | GCTTTCTGAAGGTTGGACCG | 59.125 | 55.000 | 1.37 | 0.00 | 44.90 | 4.79 |
6137 | 8528 | 1.523758 | CTTTCTGAAGGTTGGACCGG | 58.476 | 55.000 | 0.00 | 0.00 | 44.90 | 5.28 |
6138 | 8529 | 0.109723 | TTTCTGAAGGTTGGACCGGG | 59.890 | 55.000 | 6.32 | 0.00 | 44.90 | 5.73 |
6143 | 8534 | 0.321034 | GAAGGTTGGACCGGGTGTAC | 60.321 | 60.000 | 3.30 | 0.00 | 44.90 | 2.90 |
6147 | 8538 | 0.393820 | GTTGGACCGGGTGTACAGAA | 59.606 | 55.000 | 3.30 | 0.00 | 39.56 | 3.02 |
6155 | 8546 | 2.482721 | CCGGGTGTACAGAAAATGACAC | 59.517 | 50.000 | 0.00 | 0.00 | 38.32 | 3.67 |
6180 | 8571 | 4.763793 | TGAGTAAGTTCACGTTAGTAGGCT | 59.236 | 41.667 | 0.00 | 0.00 | 0.00 | 4.58 |
6181 | 8572 | 5.242393 | TGAGTAAGTTCACGTTAGTAGGCTT | 59.758 | 40.000 | 0.00 | 0.00 | 0.00 | 4.35 |
6182 | 8573 | 6.430925 | TGAGTAAGTTCACGTTAGTAGGCTTA | 59.569 | 38.462 | 0.00 | 0.00 | 0.00 | 3.09 |
6236 | 8629 | 5.890985 | TGTTTTCCTGAGTCTGAAAAATGGA | 59.109 | 36.000 | 17.21 | 0.00 | 40.87 | 3.41 |
6237 | 8630 | 6.039717 | TGTTTTCCTGAGTCTGAAAAATGGAG | 59.960 | 38.462 | 17.21 | 0.00 | 40.87 | 3.86 |
6244 | 8637 | 2.094854 | GTCTGAAAAATGGAGGCAGCAG | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
6257 | 8651 | 0.815213 | GCAGCAGCGACCATAATCCA | 60.815 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6258 | 8652 | 1.888215 | CAGCAGCGACCATAATCCAT | 58.112 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6277 | 8671 | 3.495100 | CCATTTCCGATCCCTACCAGAAG | 60.495 | 52.174 | 0.00 | 0.00 | 0.00 | 2.85 |
6278 | 8672 | 2.840640 | TTCCGATCCCTACCAGAAGA | 57.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
6279 | 8673 | 2.366640 | TCCGATCCCTACCAGAAGAG | 57.633 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
6280 | 8674 | 1.569548 | TCCGATCCCTACCAGAAGAGT | 59.430 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
6281 | 8675 | 2.781757 | TCCGATCCCTACCAGAAGAGTA | 59.218 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
6282 | 8676 | 3.150767 | CCGATCCCTACCAGAAGAGTAG | 58.849 | 54.545 | 0.00 | 0.00 | 37.53 | 2.57 |
6283 | 8677 | 2.554893 | CGATCCCTACCAGAAGAGTAGC | 59.445 | 54.545 | 0.00 | 0.00 | 36.65 | 3.58 |
6284 | 8678 | 3.567397 | GATCCCTACCAGAAGAGTAGCA | 58.433 | 50.000 | 0.00 | 0.00 | 36.65 | 3.49 |
6285 | 8679 | 3.689872 | TCCCTACCAGAAGAGTAGCAT | 57.310 | 47.619 | 0.00 | 0.00 | 36.65 | 3.79 |
6286 | 8680 | 4.808767 | TCCCTACCAGAAGAGTAGCATA | 57.191 | 45.455 | 0.00 | 0.00 | 36.65 | 3.14 |
6287 | 8681 | 5.138758 | TCCCTACCAGAAGAGTAGCATAA | 57.861 | 43.478 | 0.00 | 0.00 | 36.65 | 1.90 |
6288 | 8682 | 5.525484 | TCCCTACCAGAAGAGTAGCATAAA | 58.475 | 41.667 | 0.00 | 0.00 | 36.65 | 1.40 |
6289 | 8683 | 5.962031 | TCCCTACCAGAAGAGTAGCATAAAA | 59.038 | 40.000 | 0.00 | 0.00 | 36.65 | 1.52 |
6290 | 8684 | 6.049790 | CCCTACCAGAAGAGTAGCATAAAAC | 58.950 | 44.000 | 0.00 | 0.00 | 36.65 | 2.43 |
6291 | 8685 | 6.127026 | CCCTACCAGAAGAGTAGCATAAAACT | 60.127 | 42.308 | 0.00 | 0.00 | 36.65 | 2.66 |
6292 | 8686 | 7.069578 | CCCTACCAGAAGAGTAGCATAAAACTA | 59.930 | 40.741 | 0.00 | 0.00 | 36.65 | 2.24 |
6293 | 8687 | 7.921745 | CCTACCAGAAGAGTAGCATAAAACTAC | 59.078 | 40.741 | 0.00 | 0.00 | 40.28 | 2.73 |
6307 | 8701 | 8.711170 | AGCATAAAACTACTACTTTATAGGCCA | 58.289 | 33.333 | 5.01 | 0.00 | 0.00 | 5.36 |
6308 | 8702 | 8.989980 | GCATAAAACTACTACTTTATAGGCCAG | 58.010 | 37.037 | 5.01 | 0.00 | 0.00 | 4.85 |
6309 | 8703 | 9.490379 | CATAAAACTACTACTTTATAGGCCAGG | 57.510 | 37.037 | 5.01 | 0.00 | 0.00 | 4.45 |
6310 | 8704 | 6.496144 | AAACTACTACTTTATAGGCCAGGG | 57.504 | 41.667 | 5.01 | 0.00 | 0.00 | 4.45 |
6311 | 8705 | 5.153670 | ACTACTACTTTATAGGCCAGGGT | 57.846 | 43.478 | 5.01 | 0.00 | 0.00 | 4.34 |
6312 | 8706 | 5.535990 | ACTACTACTTTATAGGCCAGGGTT | 58.464 | 41.667 | 5.01 | 0.00 | 0.00 | 4.11 |
6313 | 8707 | 6.686544 | ACTACTACTTTATAGGCCAGGGTTA | 58.313 | 40.000 | 5.01 | 0.00 | 0.00 | 2.85 |
6314 | 8708 | 7.311407 | ACTACTACTTTATAGGCCAGGGTTAT | 58.689 | 38.462 | 5.01 | 0.00 | 0.00 | 1.89 |
6315 | 8709 | 8.459394 | ACTACTACTTTATAGGCCAGGGTTATA | 58.541 | 37.037 | 5.01 | 0.00 | 0.00 | 0.98 |
6316 | 8710 | 9.317827 | CTACTACTTTATAGGCCAGGGTTATAA | 57.682 | 37.037 | 5.01 | 1.03 | 0.00 | 0.98 |
6317 | 8711 | 8.571460 | ACTACTTTATAGGCCAGGGTTATAAA | 57.429 | 34.615 | 5.01 | 9.50 | 31.81 | 1.40 |
6318 | 8712 | 9.006405 | ACTACTTTATAGGCCAGGGTTATAAAA | 57.994 | 33.333 | 5.01 | 0.00 | 32.13 | 1.52 |
6319 | 8713 | 9.856162 | CTACTTTATAGGCCAGGGTTATAAAAA | 57.144 | 33.333 | 5.01 | 1.63 | 32.13 | 1.94 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 2.280797 | TGTTGCCACACTCGCCTC | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 4.70 |
74 | 75 | 7.768582 | TGTTCAAGTCTGATCTTGTCTGTTTTA | 59.231 | 33.333 | 14.95 | 0.00 | 43.44 | 1.52 |
77 | 78 | 5.674525 | TGTTCAAGTCTGATCTTGTCTGTT | 58.325 | 37.500 | 14.95 | 0.00 | 43.44 | 3.16 |
81 | 82 | 5.537188 | ACTCTGTTCAAGTCTGATCTTGTC | 58.463 | 41.667 | 14.95 | 11.57 | 43.44 | 3.18 |
85 | 86 | 7.658525 | ATCATACTCTGTTCAAGTCTGATCT | 57.341 | 36.000 | 0.00 | 0.00 | 36.43 | 2.75 |
148 | 152 | 3.446507 | GGACGCTGGTTTATCCGAA | 57.553 | 52.632 | 0.00 | 0.00 | 39.52 | 4.30 |
156 | 167 | 2.978010 | CAAAGGCGGACGCTGGTT | 60.978 | 61.111 | 16.72 | 5.30 | 41.60 | 3.67 |
570 | 581 | 1.080501 | CAGACGACGACCATGCAGT | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
571 | 582 | 2.447887 | GCAGACGACGACCATGCAG | 61.448 | 63.158 | 0.00 | 0.00 | 36.88 | 4.41 |
656 | 679 | 2.889503 | CTGCTGCAGCTACGCCTC | 60.890 | 66.667 | 36.61 | 8.49 | 42.66 | 4.70 |
668 | 691 | 2.436292 | GTGCTGGAGAGGCTGCTG | 60.436 | 66.667 | 0.00 | 0.00 | 0.00 | 4.41 |
673 | 696 | 4.400961 | AAGCGGTGCTGGAGAGGC | 62.401 | 66.667 | 0.00 | 0.00 | 39.62 | 4.70 |
757 | 864 | 2.737679 | GCTTCCCATATATACGCGACCC | 60.738 | 54.545 | 15.93 | 0.00 | 0.00 | 4.46 |
785 | 892 | 4.021632 | AGTTACTGTTCTACTCGGTTTCCC | 60.022 | 45.833 | 0.00 | 0.00 | 0.00 | 3.97 |
797 | 904 | 1.677552 | CCCGGCCAGTTACTGTTCT | 59.322 | 57.895 | 11.68 | 0.00 | 0.00 | 3.01 |
828 | 948 | 2.281276 | GAAACGAGGTTGGGCCGT | 60.281 | 61.111 | 0.00 | 0.00 | 43.70 | 5.68 |
890 | 1014 | 1.748493 | GAAATGCTATGCGGTTGGGAA | 59.252 | 47.619 | 0.00 | 0.00 | 0.00 | 3.97 |
924 | 1048 | 4.965062 | TCGATTTGATTTCGTTACCAAGC | 58.035 | 39.130 | 0.00 | 0.00 | 37.82 | 4.01 |
932 | 1064 | 2.160813 | CGGGGTTTCGATTTGATTTCGT | 59.839 | 45.455 | 0.00 | 0.00 | 37.82 | 3.85 |
934 | 1066 | 2.750712 | TCCGGGGTTTCGATTTGATTTC | 59.249 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
1545 | 1992 | 2.223829 | GGTGATGTAGGTCATGAGGTCG | 60.224 | 54.545 | 0.00 | 0.00 | 36.83 | 4.79 |
1779 | 2226 | 2.663602 | CTCGAACTTCTGAATGTCGGTG | 59.336 | 50.000 | 17.46 | 10.40 | 0.00 | 4.94 |
1780 | 2227 | 2.352814 | CCTCGAACTTCTGAATGTCGGT | 60.353 | 50.000 | 17.46 | 0.00 | 0.00 | 4.69 |
1786 | 2233 | 0.608640 | ACCGCCTCGAACTTCTGAAT | 59.391 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2182 | 2630 | 6.928979 | TTCGTGAAAGAGTAAAAACATGGA | 57.071 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2183 | 2631 | 6.582295 | CCATTCGTGAAAGAGTAAAAACATGG | 59.418 | 38.462 | 0.00 | 0.00 | 0.00 | 3.66 |
2203 | 2652 | 7.126398 | GTGCTTAGATAACAATCGAACCATTC | 58.874 | 38.462 | 0.00 | 0.00 | 0.00 | 2.67 |
2465 | 3326 | 0.871722 | TGTAAACTGCATGACCGCAC | 59.128 | 50.000 | 0.00 | 0.00 | 36.86 | 5.34 |
2546 | 3445 | 8.911247 | AACAAGCAGTAAAACAAGTTAAGAAG | 57.089 | 30.769 | 0.00 | 0.00 | 0.00 | 2.85 |
2728 | 3651 | 5.389935 | CCAGATCTTAAGAACAAACGACTGC | 60.390 | 44.000 | 9.71 | 0.00 | 0.00 | 4.40 |
3017 | 3946 | 3.365832 | GCCGATTTGCAACATGATACTG | 58.634 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
3048 | 3977 | 2.322161 | CTTGCTGGAAATGCTTTCACG | 58.678 | 47.619 | 9.75 | 0.00 | 41.43 | 4.35 |
3112 | 4050 | 3.873801 | GCCTAAACATGTGTCCATCACCT | 60.874 | 47.826 | 0.00 | 0.00 | 45.61 | 4.00 |
3369 | 4314 | 8.258007 | CACTGAGGGACAATACTTAAGAATACA | 58.742 | 37.037 | 10.09 | 0.00 | 0.00 | 2.29 |
3400 | 4345 | 2.928801 | TGCTTCAGTCTGCCACTAAA | 57.071 | 45.000 | 0.00 | 0.00 | 32.21 | 1.85 |
3652 | 4614 | 4.874966 | GTCTCATTAGCAAGAGCATTCAGT | 59.125 | 41.667 | 0.00 | 0.00 | 45.49 | 3.41 |
3655 | 4617 | 7.405769 | GTTTAGTCTCATTAGCAAGAGCATTC | 58.594 | 38.462 | 0.00 | 0.00 | 45.49 | 2.67 |
3686 | 4648 | 6.915544 | TGACTCATCATGCTTTGAGATAAC | 57.084 | 37.500 | 20.23 | 11.89 | 41.53 | 1.89 |
3854 | 4819 | 4.407365 | AGGGTTAAAATGGACTTCAGGTG | 58.593 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
4043 | 5015 | 3.627577 | AGCCAACTGTTTTCTACACTGTG | 59.372 | 43.478 | 6.19 | 6.19 | 32.10 | 3.66 |
4057 | 5029 | 6.094048 | ACAGCACATAACTAATAAGCCAACTG | 59.906 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
4242 | 5303 | 8.515414 | GCTAACTTATTCATCTGAAAACCAACT | 58.485 | 33.333 | 0.00 | 0.00 | 37.61 | 3.16 |
4304 | 5365 | 5.103940 | ACAGTATGATTAGGTTTGCCCTGAT | 60.104 | 40.000 | 0.00 | 0.00 | 41.61 | 2.90 |
4351 | 5412 | 9.042008 | TCTCTAACTTTGACAACTGATGTTTAC | 57.958 | 33.333 | 0.00 | 0.00 | 44.12 | 2.01 |
4674 | 5887 | 3.324117 | CAAGATATGGCATCTGACTCCG | 58.676 | 50.000 | 1.65 | 0.00 | 0.00 | 4.63 |
4741 | 5961 | 6.425114 | TCTCTTCATGTTGTTTCTAGCAAGTC | 59.575 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
4795 | 6019 | 8.677300 | TCTTAAGCATCCATGTCATTTAAAGAC | 58.323 | 33.333 | 0.00 | 9.52 | 36.55 | 3.01 |
4813 | 6037 | 3.508845 | AAGGCAACCTTCTCTTAAGCA | 57.491 | 42.857 | 0.00 | 0.00 | 40.17 | 3.91 |
5002 | 7060 | 5.003804 | TGTGATGTTCCTTTTTCTCTAGCC | 58.996 | 41.667 | 0.00 | 0.00 | 0.00 | 3.93 |
5048 | 7106 | 6.040504 | ACCATGTTACCTTCAAAAACTCTTCC | 59.959 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
5099 | 7158 | 1.063006 | CTACGTGTGCCATGCATGC | 59.937 | 57.895 | 21.69 | 11.82 | 41.91 | 4.06 |
5100 | 7159 | 1.063006 | GCTACGTGTGCCATGCATG | 59.937 | 57.895 | 20.19 | 20.19 | 41.91 | 4.06 |
5101 | 7160 | 1.377072 | TGCTACGTGTGCCATGCAT | 60.377 | 52.632 | 11.79 | 0.00 | 41.91 | 3.96 |
5102 | 7161 | 2.031768 | TGCTACGTGTGCCATGCA | 59.968 | 55.556 | 11.79 | 0.00 | 35.60 | 3.96 |
5117 | 7176 | 5.170021 | TGCAAACAATTTATCTGATGGTGC | 58.830 | 37.500 | 0.00 | 0.62 | 0.00 | 5.01 |
5147 | 7206 | 0.730834 | CGAGTTCTGCCGAGTCACAG | 60.731 | 60.000 | 4.17 | 4.17 | 35.15 | 3.66 |
5279 | 7338 | 0.526524 | CTTCATCTCGGCAGTCGACC | 60.527 | 60.000 | 13.01 | 0.00 | 43.74 | 4.79 |
5346 | 7405 | 3.735208 | CGTGTAACCAGCCTCAGACTATG | 60.735 | 52.174 | 0.00 | 0.00 | 0.00 | 2.23 |
5374 | 7433 | 3.004419 | CGAGGGAATACATCTAACTCGCA | 59.996 | 47.826 | 0.00 | 0.00 | 38.67 | 5.10 |
5389 | 7448 | 1.562008 | TGCATTATGGAACCGAGGGAA | 59.438 | 47.619 | 0.00 | 0.00 | 0.00 | 3.97 |
5427 | 7516 | 7.317390 | TCTAAACGCATCATACAAACTACTCA | 58.683 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
5435 | 7711 | 7.333174 | TCAACAATCTCTAAACGCATCATACAA | 59.667 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
5487 | 7764 | 7.094805 | TGCACAAGACCTGTTAGTAATGAAATC | 60.095 | 37.037 | 0.00 | 0.00 | 35.47 | 2.17 |
5536 | 7844 | 3.889227 | GCTAATGGCTGTGCGTGA | 58.111 | 55.556 | 0.00 | 0.00 | 38.06 | 4.35 |
5561 | 7869 | 6.013725 | TGTTTCCCTACTTTCAATCAGCTCTA | 60.014 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
5568 | 7876 | 4.379918 | GCTGCTGTTTCCCTACTTTCAATC | 60.380 | 45.833 | 0.00 | 0.00 | 0.00 | 2.67 |
5570 | 7878 | 2.884639 | GCTGCTGTTTCCCTACTTTCAA | 59.115 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
5622 | 7960 | 1.018148 | TGTTGAATTGAACGCGGTGT | 58.982 | 45.000 | 12.47 | 0.00 | 0.00 | 4.16 |
5626 | 7964 | 2.036217 | CTGTGTGTTGAATTGAACGCG | 58.964 | 47.619 | 15.08 | 3.53 | 38.87 | 6.01 |
5651 | 8042 | 6.126623 | TGTCCATATACCCATGCTAAAAGTGA | 60.127 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
5670 | 8061 | 7.645058 | ATGGATATTCGTTTCTTTTGTCCAT | 57.355 | 32.000 | 0.00 | 0.00 | 38.68 | 3.41 |
5680 | 8071 | 4.319549 | GGAGCCGAAATGGATATTCGTTTC | 60.320 | 45.833 | 16.08 | 16.08 | 46.11 | 2.78 |
5753 | 8144 | 4.570772 | GCACTAAAATATCTTCCACGCAGA | 59.429 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
5754 | 8145 | 4.550831 | CGCACTAAAATATCTTCCACGCAG | 60.551 | 45.833 | 0.00 | 0.00 | 0.00 | 5.18 |
5755 | 8146 | 3.308595 | CGCACTAAAATATCTTCCACGCA | 59.691 | 43.478 | 0.00 | 0.00 | 0.00 | 5.24 |
5756 | 8147 | 3.308866 | ACGCACTAAAATATCTTCCACGC | 59.691 | 43.478 | 0.00 | 0.00 | 0.00 | 5.34 |
5757 | 8148 | 4.565166 | TCACGCACTAAAATATCTTCCACG | 59.435 | 41.667 | 0.00 | 0.00 | 0.00 | 4.94 |
5758 | 8149 | 5.006746 | CCTCACGCACTAAAATATCTTCCAC | 59.993 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
5759 | 8150 | 5.116180 | CCTCACGCACTAAAATATCTTCCA | 58.884 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
5761 | 8152 | 6.019479 | CAGACCTCACGCACTAAAATATCTTC | 60.019 | 42.308 | 0.00 | 0.00 | 0.00 | 2.87 |
5762 | 8153 | 5.812642 | CAGACCTCACGCACTAAAATATCTT | 59.187 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
5763 | 8154 | 5.352284 | CAGACCTCACGCACTAAAATATCT | 58.648 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
5764 | 8155 | 4.025647 | GCAGACCTCACGCACTAAAATATC | 60.026 | 45.833 | 0.00 | 0.00 | 0.00 | 1.63 |
5765 | 8156 | 3.871594 | GCAGACCTCACGCACTAAAATAT | 59.128 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
5766 | 8157 | 3.056107 | AGCAGACCTCACGCACTAAAATA | 60.056 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
5767 | 8158 | 2.076863 | GCAGACCTCACGCACTAAAAT | 58.923 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
5768 | 8159 | 1.070134 | AGCAGACCTCACGCACTAAAA | 59.930 | 47.619 | 0.00 | 0.00 | 0.00 | 1.52 |
5769 | 8160 | 0.679505 | AGCAGACCTCACGCACTAAA | 59.320 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
5770 | 8161 | 0.243907 | GAGCAGACCTCACGCACTAA | 59.756 | 55.000 | 0.00 | 0.00 | 40.45 | 2.24 |
5771 | 8162 | 1.595993 | GGAGCAGACCTCACGCACTA | 61.596 | 60.000 | 0.00 | 0.00 | 42.62 | 2.74 |
5772 | 8163 | 2.653702 | GAGCAGACCTCACGCACT | 59.346 | 61.111 | 0.00 | 0.00 | 40.45 | 4.40 |
5773 | 8164 | 2.433318 | GGAGCAGACCTCACGCAC | 60.433 | 66.667 | 0.00 | 0.00 | 42.62 | 5.34 |
5774 | 8165 | 2.038814 | TTTGGAGCAGACCTCACGCA | 62.039 | 55.000 | 0.00 | 0.00 | 42.62 | 5.24 |
5775 | 8166 | 0.674895 | ATTTGGAGCAGACCTCACGC | 60.675 | 55.000 | 0.00 | 0.00 | 42.62 | 5.34 |
5776 | 8167 | 1.813513 | AATTTGGAGCAGACCTCACG | 58.186 | 50.000 | 0.00 | 0.00 | 42.62 | 4.35 |
5777 | 8168 | 3.149196 | TGAAATTTGGAGCAGACCTCAC | 58.851 | 45.455 | 0.00 | 0.00 | 42.62 | 3.51 |
5778 | 8169 | 3.507162 | TGAAATTTGGAGCAGACCTCA | 57.493 | 42.857 | 0.00 | 0.00 | 42.62 | 3.86 |
5779 | 8170 | 3.064545 | CGATGAAATTTGGAGCAGACCTC | 59.935 | 47.826 | 0.00 | 0.00 | 39.98 | 3.85 |
5780 | 8171 | 3.012518 | CGATGAAATTTGGAGCAGACCT | 58.987 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
5781 | 8172 | 2.478539 | GCGATGAAATTTGGAGCAGACC | 60.479 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5782 | 8173 | 2.162208 | TGCGATGAAATTTGGAGCAGAC | 59.838 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
5783 | 8174 | 2.435422 | TGCGATGAAATTTGGAGCAGA | 58.565 | 42.857 | 0.00 | 0.00 | 0.00 | 4.26 |
5784 | 8175 | 2.925578 | TGCGATGAAATTTGGAGCAG | 57.074 | 45.000 | 0.00 | 0.00 | 0.00 | 4.24 |
5785 | 8176 | 3.872511 | AATGCGATGAAATTTGGAGCA | 57.127 | 38.095 | 0.00 | 2.55 | 37.54 | 4.26 |
5786 | 8177 | 4.509915 | CAAATGCGATGAAATTTGGAGC | 57.490 | 40.909 | 0.00 | 0.00 | 39.19 | 4.70 |
5790 | 8181 | 3.181518 | GCACCCAAATGCGATGAAATTTG | 60.182 | 43.478 | 0.00 | 0.00 | 41.41 | 2.32 |
5791 | 8182 | 3.002102 | GCACCCAAATGCGATGAAATTT | 58.998 | 40.909 | 0.00 | 0.00 | 35.50 | 1.82 |
5792 | 8183 | 2.620242 | GCACCCAAATGCGATGAAATT | 58.380 | 42.857 | 0.00 | 0.00 | 35.50 | 1.82 |
5793 | 8184 | 2.298411 | GCACCCAAATGCGATGAAAT | 57.702 | 45.000 | 0.00 | 0.00 | 35.50 | 2.17 |
5794 | 8185 | 3.810579 | GCACCCAAATGCGATGAAA | 57.189 | 47.368 | 0.00 | 0.00 | 35.50 | 2.69 |
5801 | 8192 | 1.001181 | ACTGTTCATGCACCCAAATGC | 59.999 | 47.619 | 0.00 | 0.00 | 46.32 | 3.56 |
5802 | 8193 | 4.517952 | TTACTGTTCATGCACCCAAATG | 57.482 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
5803 | 8194 | 4.588528 | AGTTTACTGTTCATGCACCCAAAT | 59.411 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
5804 | 8195 | 3.957497 | AGTTTACTGTTCATGCACCCAAA | 59.043 | 39.130 | 0.00 | 0.00 | 0.00 | 3.28 |
5805 | 8196 | 3.561143 | AGTTTACTGTTCATGCACCCAA | 58.439 | 40.909 | 0.00 | 0.00 | 0.00 | 4.12 |
5806 | 8197 | 3.222173 | AGTTTACTGTTCATGCACCCA | 57.778 | 42.857 | 0.00 | 0.00 | 0.00 | 4.51 |
5807 | 8198 | 4.584327 | AAAGTTTACTGTTCATGCACCC | 57.416 | 40.909 | 0.00 | 0.00 | 0.00 | 4.61 |
5827 | 8218 | 6.627395 | AACACAATCGAGGTATGTGAAAAA | 57.373 | 33.333 | 22.34 | 0.00 | 45.61 | 1.94 |
5828 | 8219 | 6.627395 | AAACACAATCGAGGTATGTGAAAA | 57.373 | 33.333 | 22.34 | 0.00 | 45.61 | 2.29 |
5829 | 8220 | 6.627395 | AAAACACAATCGAGGTATGTGAAA | 57.373 | 33.333 | 22.34 | 0.00 | 45.61 | 2.69 |
5830 | 8221 | 6.627395 | AAAAACACAATCGAGGTATGTGAA | 57.373 | 33.333 | 22.34 | 0.00 | 45.61 | 3.18 |
5859 | 8250 | 6.763135 | CCATTTGTACATCTAAGCAGCTCTTA | 59.237 | 38.462 | 0.00 | 0.00 | 36.25 | 2.10 |
5860 | 8251 | 5.587844 | CCATTTGTACATCTAAGCAGCTCTT | 59.412 | 40.000 | 0.00 | 4.26 | 38.79 | 2.85 |
5861 | 8252 | 5.104776 | TCCATTTGTACATCTAAGCAGCTCT | 60.105 | 40.000 | 0.00 | 0.00 | 0.00 | 4.09 |
5862 | 8253 | 5.007136 | GTCCATTTGTACATCTAAGCAGCTC | 59.993 | 44.000 | 0.00 | 0.00 | 0.00 | 4.09 |
5863 | 8254 | 4.878397 | GTCCATTTGTACATCTAAGCAGCT | 59.122 | 41.667 | 0.00 | 0.00 | 0.00 | 4.24 |
5864 | 8255 | 4.878397 | AGTCCATTTGTACATCTAAGCAGC | 59.122 | 41.667 | 0.00 | 0.00 | 0.00 | 5.25 |
5865 | 8256 | 8.492673 | TTTAGTCCATTTGTACATCTAAGCAG | 57.507 | 34.615 | 0.00 | 0.00 | 0.00 | 4.24 |
5866 | 8257 | 8.856153 | TTTTAGTCCATTTGTACATCTAAGCA | 57.144 | 30.769 | 0.00 | 0.00 | 0.00 | 3.91 |
5871 | 8262 | 9.010029 | ACGAAATTTTAGTCCATTTGTACATCT | 57.990 | 29.630 | 0.00 | 0.00 | 0.00 | 2.90 |
5877 | 8268 | 9.620660 | GTTCATACGAAATTTTAGTCCATTTGT | 57.379 | 29.630 | 0.00 | 0.00 | 31.43 | 2.83 |
5878 | 8269 | 9.072294 | GGTTCATACGAAATTTTAGTCCATTTG | 57.928 | 33.333 | 0.00 | 0.00 | 31.43 | 2.32 |
5879 | 8270 | 9.020731 | AGGTTCATACGAAATTTTAGTCCATTT | 57.979 | 29.630 | 0.00 | 0.00 | 31.43 | 2.32 |
5880 | 8271 | 8.575649 | AGGTTCATACGAAATTTTAGTCCATT | 57.424 | 30.769 | 0.00 | 0.00 | 31.43 | 3.16 |
5881 | 8272 | 7.827236 | TGAGGTTCATACGAAATTTTAGTCCAT | 59.173 | 33.333 | 0.00 | 0.00 | 31.43 | 3.41 |
5882 | 8273 | 7.118680 | GTGAGGTTCATACGAAATTTTAGTCCA | 59.881 | 37.037 | 0.00 | 0.00 | 31.43 | 4.02 |
5883 | 8274 | 7.461918 | GTGAGGTTCATACGAAATTTTAGTCC | 58.538 | 38.462 | 0.00 | 0.00 | 31.43 | 3.85 |
5884 | 8275 | 7.171434 | CGTGAGGTTCATACGAAATTTTAGTC | 58.829 | 38.462 | 0.00 | 0.00 | 40.01 | 2.59 |
5885 | 8276 | 6.401796 | GCGTGAGGTTCATACGAAATTTTAGT | 60.402 | 38.462 | 0.00 | 0.59 | 40.01 | 2.24 |
5886 | 8277 | 5.957796 | GCGTGAGGTTCATACGAAATTTTAG | 59.042 | 40.000 | 0.00 | 0.00 | 40.01 | 1.85 |
5887 | 8278 | 5.408909 | TGCGTGAGGTTCATACGAAATTTTA | 59.591 | 36.000 | 0.00 | 0.00 | 40.01 | 1.52 |
5888 | 8279 | 4.214545 | TGCGTGAGGTTCATACGAAATTTT | 59.785 | 37.500 | 0.00 | 0.00 | 40.01 | 1.82 |
5889 | 8280 | 3.749088 | TGCGTGAGGTTCATACGAAATTT | 59.251 | 39.130 | 0.00 | 0.00 | 40.01 | 1.82 |
5890 | 8281 | 3.124636 | GTGCGTGAGGTTCATACGAAATT | 59.875 | 43.478 | 0.00 | 0.00 | 40.01 | 1.82 |
5891 | 8282 | 2.671396 | GTGCGTGAGGTTCATACGAAAT | 59.329 | 45.455 | 0.00 | 0.00 | 40.01 | 2.17 |
5892 | 8283 | 2.063266 | GTGCGTGAGGTTCATACGAAA | 58.937 | 47.619 | 0.00 | 0.00 | 40.01 | 3.46 |
5893 | 8284 | 1.271379 | AGTGCGTGAGGTTCATACGAA | 59.729 | 47.619 | 0.00 | 0.00 | 40.01 | 3.85 |
5894 | 8285 | 0.885879 | AGTGCGTGAGGTTCATACGA | 59.114 | 50.000 | 0.00 | 0.00 | 40.01 | 3.43 |
5895 | 8286 | 2.554806 | TAGTGCGTGAGGTTCATACG | 57.445 | 50.000 | 0.00 | 0.00 | 40.52 | 3.06 |
5896 | 8287 | 3.367025 | GTGTTAGTGCGTGAGGTTCATAC | 59.633 | 47.826 | 0.00 | 0.00 | 0.00 | 2.39 |
5897 | 8288 | 3.006003 | TGTGTTAGTGCGTGAGGTTCATA | 59.994 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
5898 | 8289 | 2.224185 | TGTGTTAGTGCGTGAGGTTCAT | 60.224 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
5899 | 8290 | 1.137282 | TGTGTTAGTGCGTGAGGTTCA | 59.863 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
5900 | 8291 | 1.860676 | TGTGTTAGTGCGTGAGGTTC | 58.139 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
5901 | 8292 | 2.037251 | AGATGTGTTAGTGCGTGAGGTT | 59.963 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
5902 | 8293 | 1.618837 | AGATGTGTTAGTGCGTGAGGT | 59.381 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
5903 | 8294 | 2.370281 | AGATGTGTTAGTGCGTGAGG | 57.630 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5904 | 8295 | 2.668457 | GGAAGATGTGTTAGTGCGTGAG | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5905 | 8296 | 2.036604 | TGGAAGATGTGTTAGTGCGTGA | 59.963 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
5906 | 8297 | 2.412870 | TGGAAGATGTGTTAGTGCGTG | 58.587 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
5907 | 8298 | 2.831685 | TGGAAGATGTGTTAGTGCGT | 57.168 | 45.000 | 0.00 | 0.00 | 0.00 | 5.24 |
5908 | 8299 | 2.352651 | CCATGGAAGATGTGTTAGTGCG | 59.647 | 50.000 | 5.56 | 0.00 | 0.00 | 5.34 |
5909 | 8300 | 3.609853 | TCCATGGAAGATGTGTTAGTGC | 58.390 | 45.455 | 13.46 | 0.00 | 0.00 | 4.40 |
5910 | 8301 | 6.573664 | TTTTCCATGGAAGATGTGTTAGTG | 57.426 | 37.500 | 25.69 | 0.00 | 35.38 | 2.74 |
5944 | 8335 | 9.415544 | GCATGAACAGTAAAAAGATCAAGAAAT | 57.584 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
5945 | 8336 | 8.412456 | TGCATGAACAGTAAAAAGATCAAGAAA | 58.588 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
5946 | 8337 | 7.862372 | GTGCATGAACAGTAAAAAGATCAAGAA | 59.138 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
5947 | 8338 | 7.013178 | TGTGCATGAACAGTAAAAAGATCAAGA | 59.987 | 33.333 | 1.03 | 0.00 | 0.00 | 3.02 |
5948 | 8339 | 7.140705 | TGTGCATGAACAGTAAAAAGATCAAG | 58.859 | 34.615 | 1.03 | 0.00 | 0.00 | 3.02 |
5949 | 8340 | 7.036996 | TGTGCATGAACAGTAAAAAGATCAA | 57.963 | 32.000 | 1.03 | 0.00 | 0.00 | 2.57 |
5950 | 8341 | 6.631971 | TGTGCATGAACAGTAAAAAGATCA | 57.368 | 33.333 | 1.03 | 0.00 | 0.00 | 2.92 |
5951 | 8342 | 7.362662 | TCTTGTGCATGAACAGTAAAAAGATC | 58.637 | 34.615 | 6.62 | 0.00 | 0.00 | 2.75 |
5952 | 8343 | 7.275888 | TCTTGTGCATGAACAGTAAAAAGAT | 57.724 | 32.000 | 6.62 | 0.00 | 0.00 | 2.40 |
5953 | 8344 | 6.691754 | TCTTGTGCATGAACAGTAAAAAGA | 57.308 | 33.333 | 6.62 | 3.05 | 0.00 | 2.52 |
5954 | 8345 | 5.400485 | GCTCTTGTGCATGAACAGTAAAAAG | 59.600 | 40.000 | 6.62 | 0.42 | 0.00 | 2.27 |
5955 | 8346 | 5.163571 | TGCTCTTGTGCATGAACAGTAAAAA | 60.164 | 36.000 | 6.62 | 0.00 | 38.12 | 1.94 |
5956 | 8347 | 4.337836 | TGCTCTTGTGCATGAACAGTAAAA | 59.662 | 37.500 | 6.62 | 0.00 | 38.12 | 1.52 |
5957 | 8348 | 3.882288 | TGCTCTTGTGCATGAACAGTAAA | 59.118 | 39.130 | 6.62 | 0.00 | 38.12 | 2.01 |
5958 | 8349 | 3.475575 | TGCTCTTGTGCATGAACAGTAA | 58.524 | 40.909 | 6.62 | 0.00 | 38.12 | 2.24 |
5959 | 8350 | 3.069289 | CTGCTCTTGTGCATGAACAGTA | 58.931 | 45.455 | 6.62 | 0.00 | 42.48 | 2.74 |
5960 | 8351 | 1.878088 | CTGCTCTTGTGCATGAACAGT | 59.122 | 47.619 | 6.62 | 0.00 | 42.48 | 3.55 |
5961 | 8352 | 2.148768 | TCTGCTCTTGTGCATGAACAG | 58.851 | 47.619 | 6.62 | 1.92 | 42.48 | 3.16 |
5962 | 8353 | 2.259266 | TCTGCTCTTGTGCATGAACA | 57.741 | 45.000 | 1.03 | 1.03 | 42.48 | 3.18 |
5963 | 8354 | 2.745821 | TCATCTGCTCTTGTGCATGAAC | 59.254 | 45.455 | 0.00 | 0.00 | 42.48 | 3.18 |
5964 | 8355 | 3.007635 | CTCATCTGCTCTTGTGCATGAA | 58.992 | 45.455 | 0.00 | 0.00 | 42.48 | 2.57 |
5965 | 8356 | 2.629051 | CTCATCTGCTCTTGTGCATGA | 58.371 | 47.619 | 0.00 | 0.51 | 42.48 | 3.07 |
5966 | 8357 | 1.064208 | GCTCATCTGCTCTTGTGCATG | 59.936 | 52.381 | 0.00 | 0.00 | 42.48 | 4.06 |
5967 | 8358 | 1.065345 | AGCTCATCTGCTCTTGTGCAT | 60.065 | 47.619 | 0.00 | 0.00 | 42.48 | 3.96 |
5968 | 8359 | 0.323957 | AGCTCATCTGCTCTTGTGCA | 59.676 | 50.000 | 9.05 | 0.00 | 39.34 | 4.57 |
5969 | 8360 | 3.156157 | AGCTCATCTGCTCTTGTGC | 57.844 | 52.632 | 0.00 | 0.00 | 39.34 | 4.57 |
5986 | 8377 | 0.598680 | CGGCTAAATGGCTCCGAGAG | 60.599 | 60.000 | 0.00 | 0.00 | 44.23 | 3.20 |
5987 | 8378 | 1.441729 | CGGCTAAATGGCTCCGAGA | 59.558 | 57.895 | 0.00 | 0.00 | 44.23 | 4.04 |
5988 | 8379 | 2.247437 | GCGGCTAAATGGCTCCGAG | 61.247 | 63.158 | 3.51 | 0.00 | 44.23 | 4.63 |
5989 | 8380 | 2.203015 | GCGGCTAAATGGCTCCGA | 60.203 | 61.111 | 3.51 | 0.00 | 44.23 | 4.55 |
5990 | 8381 | 2.203070 | AGCGGCTAAATGGCTCCG | 60.203 | 61.111 | 0.00 | 0.00 | 44.29 | 4.63 |
5991 | 8382 | 3.737824 | GAGCGGCTAAATGGCTCC | 58.262 | 61.111 | 0.60 | 0.00 | 45.67 | 4.70 |
5993 | 8384 | 0.179062 | CTGAGAGCGGCTAAATGGCT | 60.179 | 55.000 | 0.60 | 0.00 | 40.29 | 4.75 |
5994 | 8385 | 0.179073 | TCTGAGAGCGGCTAAATGGC | 60.179 | 55.000 | 0.60 | 0.00 | 37.94 | 4.40 |
5995 | 8386 | 2.315925 | TTCTGAGAGCGGCTAAATGG | 57.684 | 50.000 | 0.60 | 0.00 | 0.00 | 3.16 |
5996 | 8387 | 2.029728 | CGTTTCTGAGAGCGGCTAAATG | 59.970 | 50.000 | 0.60 | 1.06 | 0.00 | 2.32 |
5997 | 8388 | 2.094182 | TCGTTTCTGAGAGCGGCTAAAT | 60.094 | 45.455 | 0.60 | 0.00 | 0.00 | 1.40 |
5998 | 8389 | 1.271379 | TCGTTTCTGAGAGCGGCTAAA | 59.729 | 47.619 | 0.60 | 0.00 | 0.00 | 1.85 |
5999 | 8390 | 0.885879 | TCGTTTCTGAGAGCGGCTAA | 59.114 | 50.000 | 0.60 | 0.00 | 0.00 | 3.09 |
6000 | 8391 | 0.885879 | TTCGTTTCTGAGAGCGGCTA | 59.114 | 50.000 | 0.60 | 0.00 | 0.00 | 3.93 |
6001 | 8392 | 0.033504 | TTTCGTTTCTGAGAGCGGCT | 59.966 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
6002 | 8393 | 0.440371 | CTTTCGTTTCTGAGAGCGGC | 59.560 | 55.000 | 8.24 | 0.00 | 0.00 | 6.53 |
6003 | 8394 | 1.071605 | CCTTTCGTTTCTGAGAGCGG | 58.928 | 55.000 | 8.24 | 0.00 | 0.00 | 5.52 |
6004 | 8395 | 2.065993 | TCCTTTCGTTTCTGAGAGCG | 57.934 | 50.000 | 2.80 | 2.80 | 0.00 | 5.03 |
6005 | 8396 | 3.589988 | TGATCCTTTCGTTTCTGAGAGC | 58.410 | 45.455 | 0.00 | 0.00 | 0.00 | 4.09 |
6006 | 8397 | 5.871524 | TGAATGATCCTTTCGTTTCTGAGAG | 59.128 | 40.000 | 0.00 | 0.00 | 33.61 | 3.20 |
6007 | 8398 | 5.793817 | TGAATGATCCTTTCGTTTCTGAGA | 58.206 | 37.500 | 0.00 | 0.00 | 33.61 | 3.27 |
6008 | 8399 | 5.447010 | GCTGAATGATCCTTTCGTTTCTGAG | 60.447 | 44.000 | 0.00 | 0.00 | 33.61 | 3.35 |
6009 | 8400 | 4.393062 | GCTGAATGATCCTTTCGTTTCTGA | 59.607 | 41.667 | 0.00 | 0.00 | 33.61 | 3.27 |
6010 | 8401 | 4.656041 | GCTGAATGATCCTTTCGTTTCTG | 58.344 | 43.478 | 0.00 | 0.00 | 33.61 | 3.02 |
6011 | 8402 | 3.372206 | CGCTGAATGATCCTTTCGTTTCT | 59.628 | 43.478 | 0.00 | 0.00 | 33.61 | 2.52 |
6012 | 8403 | 3.125316 | ACGCTGAATGATCCTTTCGTTTC | 59.875 | 43.478 | 0.00 | 0.00 | 33.61 | 2.78 |
6020 | 8411 | 4.547859 | GGCACGCTGAATGATCCT | 57.452 | 55.556 | 0.00 | 0.00 | 0.00 | 3.24 |
6045 | 8436 | 3.470888 | AAGGACGGAGGATGGCGG | 61.471 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
6062 | 8453 | 1.003118 | CTGGACGGGAATCCTTTGTCA | 59.997 | 52.381 | 16.93 | 6.86 | 39.75 | 3.58 |
6063 | 8454 | 1.739067 | CTGGACGGGAATCCTTTGTC | 58.261 | 55.000 | 0.00 | 5.36 | 39.75 | 3.18 |
6064 | 8455 | 0.322546 | GCTGGACGGGAATCCTTTGT | 60.323 | 55.000 | 0.00 | 0.00 | 39.75 | 2.83 |
6065 | 8456 | 1.032114 | GGCTGGACGGGAATCCTTTG | 61.032 | 60.000 | 0.00 | 0.00 | 39.75 | 2.77 |
6066 | 8457 | 1.303282 | GGCTGGACGGGAATCCTTT | 59.697 | 57.895 | 0.00 | 0.00 | 39.75 | 3.11 |
6067 | 8458 | 1.281925 | ATGGCTGGACGGGAATCCTT | 61.282 | 55.000 | 0.00 | 0.00 | 39.75 | 3.36 |
6068 | 8459 | 1.694169 | ATGGCTGGACGGGAATCCT | 60.694 | 57.895 | 0.00 | 0.00 | 39.75 | 3.24 |
6069 | 8460 | 1.526917 | CATGGCTGGACGGGAATCC | 60.527 | 63.158 | 0.00 | 0.00 | 39.45 | 3.01 |
6070 | 8461 | 2.189499 | GCATGGCTGGACGGGAATC | 61.189 | 63.158 | 0.00 | 0.00 | 0.00 | 2.52 |
6071 | 8462 | 2.124151 | GCATGGCTGGACGGGAAT | 60.124 | 61.111 | 0.00 | 0.00 | 0.00 | 3.01 |
6072 | 8463 | 3.329889 | AGCATGGCTGGACGGGAA | 61.330 | 61.111 | 0.00 | 0.00 | 37.57 | 3.97 |
6085 | 8476 | 1.681166 | GCCTCTCCAACATGACAGCAT | 60.681 | 52.381 | 0.00 | 0.00 | 34.29 | 3.79 |
6086 | 8477 | 0.321919 | GCCTCTCCAACATGACAGCA | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
6087 | 8478 | 1.028868 | GGCCTCTCCAACATGACAGC | 61.029 | 60.000 | 0.00 | 0.00 | 34.01 | 4.40 |
6088 | 8479 | 0.742281 | CGGCCTCTCCAACATGACAG | 60.742 | 60.000 | 0.00 | 0.00 | 34.01 | 3.51 |
6089 | 8480 | 1.296392 | CGGCCTCTCCAACATGACA | 59.704 | 57.895 | 0.00 | 0.00 | 34.01 | 3.58 |
6090 | 8481 | 0.741221 | GACGGCCTCTCCAACATGAC | 60.741 | 60.000 | 0.00 | 0.00 | 34.01 | 3.06 |
6091 | 8482 | 1.191489 | TGACGGCCTCTCCAACATGA | 61.191 | 55.000 | 0.00 | 0.00 | 34.01 | 3.07 |
6092 | 8483 | 1.021390 | GTGACGGCCTCTCCAACATG | 61.021 | 60.000 | 0.00 | 0.00 | 34.01 | 3.21 |
6093 | 8484 | 1.296715 | GTGACGGCCTCTCCAACAT | 59.703 | 57.895 | 0.00 | 0.00 | 34.01 | 2.71 |
6094 | 8485 | 2.741092 | GTGACGGCCTCTCCAACA | 59.259 | 61.111 | 0.00 | 0.00 | 34.01 | 3.33 |
6095 | 8486 | 2.432628 | CGTGACGGCCTCTCCAAC | 60.433 | 66.667 | 0.00 | 0.00 | 34.01 | 3.77 |
6096 | 8487 | 3.691342 | CCGTGACGGCCTCTCCAA | 61.691 | 66.667 | 12.53 | 0.00 | 41.17 | 3.53 |
6107 | 8498 | 4.430423 | CAGAAAGCGCGCCGTGAC | 62.430 | 66.667 | 30.33 | 14.98 | 0.00 | 3.67 |
6108 | 8499 | 4.656117 | TCAGAAAGCGCGCCGTGA | 62.656 | 61.111 | 30.33 | 21.66 | 0.00 | 4.35 |
6109 | 8500 | 3.635734 | CTTCAGAAAGCGCGCCGTG | 62.636 | 63.158 | 30.33 | 19.63 | 0.00 | 4.94 |
6110 | 8501 | 3.414700 | CTTCAGAAAGCGCGCCGT | 61.415 | 61.111 | 30.33 | 16.89 | 0.00 | 5.68 |
6111 | 8502 | 4.152625 | CCTTCAGAAAGCGCGCCG | 62.153 | 66.667 | 30.33 | 11.69 | 0.00 | 6.46 |
6112 | 8503 | 2.617274 | AACCTTCAGAAAGCGCGCC | 61.617 | 57.895 | 30.33 | 13.31 | 0.00 | 6.53 |
6113 | 8504 | 1.441016 | CAACCTTCAGAAAGCGCGC | 60.441 | 57.895 | 26.66 | 26.66 | 0.00 | 6.86 |
6114 | 8505 | 1.207593 | CCAACCTTCAGAAAGCGCG | 59.792 | 57.895 | 0.00 | 0.00 | 0.00 | 6.86 |
6115 | 8506 | 0.238553 | GTCCAACCTTCAGAAAGCGC | 59.761 | 55.000 | 0.00 | 0.00 | 0.00 | 5.92 |
6116 | 8507 | 0.875059 | GGTCCAACCTTCAGAAAGCG | 59.125 | 55.000 | 0.00 | 0.00 | 34.73 | 4.68 |
6117 | 8508 | 0.875059 | CGGTCCAACCTTCAGAAAGC | 59.125 | 55.000 | 0.00 | 0.00 | 35.66 | 3.51 |
6118 | 8509 | 1.523758 | CCGGTCCAACCTTCAGAAAG | 58.476 | 55.000 | 0.00 | 0.00 | 35.66 | 2.62 |
6131 | 8522 | 2.081462 | CATTTTCTGTACACCCGGTCC | 58.919 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
6136 | 8527 | 4.759693 | TCATGTGTCATTTTCTGTACACCC | 59.240 | 41.667 | 0.00 | 0.00 | 41.17 | 4.61 |
6137 | 8528 | 5.470098 | ACTCATGTGTCATTTTCTGTACACC | 59.530 | 40.000 | 0.00 | 0.00 | 41.17 | 4.16 |
6138 | 8529 | 6.545504 | ACTCATGTGTCATTTTCTGTACAC | 57.454 | 37.500 | 0.00 | 0.00 | 42.00 | 2.90 |
6143 | 8534 | 7.800380 | GTGAACTTACTCATGTGTCATTTTCTG | 59.200 | 37.037 | 3.19 | 0.00 | 0.00 | 3.02 |
6147 | 8538 | 5.758296 | ACGTGAACTTACTCATGTGTCATTT | 59.242 | 36.000 | 3.19 | 0.00 | 42.63 | 2.32 |
6155 | 8546 | 5.515626 | GCCTACTAACGTGAACTTACTCATG | 59.484 | 44.000 | 0.00 | 0.00 | 38.16 | 3.07 |
6220 | 8611 | 3.415212 | CTGCCTCCATTTTTCAGACTCA | 58.585 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
6236 | 8629 | 0.533755 | GATTATGGTCGCTGCTGCCT | 60.534 | 55.000 | 10.24 | 0.00 | 35.36 | 4.75 |
6237 | 8630 | 1.510480 | GGATTATGGTCGCTGCTGCC | 61.510 | 60.000 | 10.24 | 0.00 | 35.36 | 4.85 |
6244 | 8637 | 2.489971 | TCGGAAATGGATTATGGTCGC | 58.510 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
6257 | 8651 | 3.643792 | CTCTTCTGGTAGGGATCGGAAAT | 59.356 | 47.826 | 0.00 | 0.00 | 30.42 | 2.17 |
6258 | 8652 | 3.031736 | CTCTTCTGGTAGGGATCGGAAA | 58.968 | 50.000 | 0.00 | 0.00 | 30.42 | 3.13 |
6281 | 8675 | 8.711170 | TGGCCTATAAAGTAGTAGTTTTATGCT | 58.289 | 33.333 | 3.32 | 0.00 | 33.06 | 3.79 |
6282 | 8676 | 8.897872 | TGGCCTATAAAGTAGTAGTTTTATGC | 57.102 | 34.615 | 3.32 | 8.82 | 33.06 | 3.14 |
6283 | 8677 | 9.490379 | CCTGGCCTATAAAGTAGTAGTTTTATG | 57.510 | 37.037 | 3.32 | 0.29 | 33.06 | 1.90 |
6284 | 8678 | 8.657712 | CCCTGGCCTATAAAGTAGTAGTTTTAT | 58.342 | 37.037 | 3.32 | 6.56 | 34.71 | 1.40 |
6285 | 8679 | 7.624879 | ACCCTGGCCTATAAAGTAGTAGTTTTA | 59.375 | 37.037 | 3.32 | 0.00 | 0.00 | 1.52 |
6286 | 8680 | 6.446110 | ACCCTGGCCTATAAAGTAGTAGTTTT | 59.554 | 38.462 | 3.32 | 0.00 | 0.00 | 2.43 |
6287 | 8681 | 5.968784 | ACCCTGGCCTATAAAGTAGTAGTTT | 59.031 | 40.000 | 3.32 | 8.04 | 0.00 | 2.66 |
6288 | 8682 | 5.535990 | ACCCTGGCCTATAAAGTAGTAGTT | 58.464 | 41.667 | 3.32 | 0.00 | 0.00 | 2.24 |
6289 | 8683 | 5.153670 | ACCCTGGCCTATAAAGTAGTAGT | 57.846 | 43.478 | 3.32 | 0.00 | 0.00 | 2.73 |
6290 | 8684 | 7.793948 | ATAACCCTGGCCTATAAAGTAGTAG | 57.206 | 40.000 | 3.32 | 0.00 | 0.00 | 2.57 |
6291 | 8685 | 9.673283 | TTTATAACCCTGGCCTATAAAGTAGTA | 57.327 | 33.333 | 3.32 | 0.00 | 0.00 | 1.82 |
6292 | 8686 | 8.571460 | TTTATAACCCTGGCCTATAAAGTAGT | 57.429 | 34.615 | 3.32 | 0.00 | 0.00 | 2.73 |
6293 | 8687 | 9.856162 | TTTTTATAACCCTGGCCTATAAAGTAG | 57.144 | 33.333 | 3.32 | 0.00 | 32.13 | 2.57 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.