Multiple sequence alignment - TraesCS5B01G495600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G495600 chr5B 100.000 2715 0 0 1 2715 662984089 662981375 0.000000e+00 5014
1 TraesCS5B01G495600 chr5B 88.383 878 57 14 1 839 669215944 669216815 0.000000e+00 1014
2 TraesCS5B01G495600 chr5B 88.128 438 43 6 1158 1595 669217212 669217640 1.860000e-141 512
3 TraesCS5B01G495600 chr5D 91.684 1479 70 19 345 1783 526914058 526912593 0.000000e+00 2001
4 TraesCS5B01G495600 chr5D 89.782 871 53 14 1 839 529852156 529853022 0.000000e+00 1083
5 TraesCS5B01G495600 chr5D 98.532 477 7 0 1 477 526914673 526914197 0.000000e+00 843
6 TraesCS5B01G495600 chr5A 93.532 974 44 8 1 974 654094848 654093894 0.000000e+00 1432
7 TraesCS5B01G495600 chr5A 89.504 867 55 18 1 839 657768036 657768894 0.000000e+00 1064
8 TraesCS5B01G495600 chr5A 91.592 666 46 8 1047 1707 654093780 654093120 0.000000e+00 911
9 TraesCS5B01G495600 chr5A 78.218 505 64 36 2220 2703 654091773 654091294 5.720000e-72 281
10 TraesCS5B01G495600 chr2B 93.258 89 6 0 1844 1932 182712501 182712413 6.100000e-27 132
11 TraesCS5B01G495600 chr6A 94.118 85 5 0 1845 1929 329971222 329971306 2.190000e-26 130
12 TraesCS5B01G495600 chr6A 93.103 87 6 0 1843 1929 374418807 374418721 7.890000e-26 128
13 TraesCS5B01G495600 chr3A 92.222 90 7 0 1840 1929 51753239 51753328 7.890000e-26 128
14 TraesCS5B01G495600 chrUn 93.023 86 6 0 1844 1929 356159591 356159676 2.840000e-25 126
15 TraesCS5B01G495600 chr6D 93.023 86 6 0 1844 1929 367864199 367864114 2.840000e-25 126
16 TraesCS5B01G495600 chr4A 92.222 90 5 2 1841 1929 519221907 519221819 2.840000e-25 126
17 TraesCS5B01G495600 chr4A 93.023 86 6 0 1845 1930 742408590 742408505 2.840000e-25 126
18 TraesCS5B01G495600 chr4A 91.304 92 8 0 1845 1936 743997895 743997986 2.840000e-25 126


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G495600 chr5B 662981375 662984089 2714 True 5014.000000 5014 100.000000 1 2715 1 chr5B.!!$R1 2714
1 TraesCS5B01G495600 chr5B 669215944 669217640 1696 False 763.000000 1014 88.255500 1 1595 2 chr5B.!!$F1 1594
2 TraesCS5B01G495600 chr5D 526912593 526914673 2080 True 1422.000000 2001 95.108000 1 1783 2 chr5D.!!$R1 1782
3 TraesCS5B01G495600 chr5D 529852156 529853022 866 False 1083.000000 1083 89.782000 1 839 1 chr5D.!!$F1 838
4 TraesCS5B01G495600 chr5A 657768036 657768894 858 False 1064.000000 1064 89.504000 1 839 1 chr5A.!!$F1 838
5 TraesCS5B01G495600 chr5A 654091294 654094848 3554 True 874.666667 1432 87.780667 1 2703 3 chr5A.!!$R1 2702

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
976 1314 1.677552 CCCGGCCAGTTACTGTTCT 59.322 57.895 11.68 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2426 3943 0.165727 TCATCGTTCATGCACGCAAC 59.834 50.0 13.25 0.0 40.14 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
230 237 2.032620 GATGTAGGTCATGAGGTCGGT 58.967 52.381 0.00 0.00 36.83 4.69
236 243 1.685765 TCATGAGGTCGGTGGAGGG 60.686 63.158 0.00 0.00 0.00 4.30
839 1152 2.750712 TCCGGGGTTTCGATTTGATTTC 59.249 45.455 0.00 0.00 0.00 2.17
841 1154 2.160813 CGGGGTTTCGATTTGATTTCGT 59.839 45.455 0.00 0.00 37.82 3.85
849 1162 4.965062 TCGATTTGATTTCGTTACCAAGC 58.035 39.130 0.00 0.00 37.82 4.01
883 1196 1.748493 GAAATGCTATGCGGTTGGGAA 59.252 47.619 0.00 0.00 0.00 3.97
945 1270 2.281276 GAAACGAGGTTGGGCCGT 60.281 61.111 0.00 0.00 43.70 5.68
976 1314 1.677552 CCCGGCCAGTTACTGTTCT 59.322 57.895 11.68 0.00 0.00 3.01
988 1326 4.021632 AGTTACTGTTCTACTCGGTTTCCC 60.022 45.833 0.00 0.00 0.00 3.97
1016 1354 2.737679 GCTTCCCATATATACGCGACCC 60.738 54.545 15.93 0.00 0.00 4.46
1100 1522 4.400961 AAGCGGTGCTGGAGAGGC 62.401 66.667 0.00 0.00 39.62 4.70
1105 1527 2.436292 GTGCTGGAGAGGCTGCTG 60.436 66.667 0.00 0.00 0.00 4.41
1117 1539 2.889503 CTGCTGCAGCTACGCCTC 60.890 66.667 36.61 8.49 42.66 4.70
1199 1633 2.880879 CCGCAGACGACGACCATG 60.881 66.667 0.00 0.00 43.93 3.66
1200 1634 3.545481 CGCAGACGACGACCATGC 61.545 66.667 0.00 1.37 43.93 4.06
1201 1635 2.432456 GCAGACGACGACCATGCA 60.432 61.111 0.00 0.00 36.88 3.96
1202 1636 2.447887 GCAGACGACGACCATGCAG 61.448 63.158 0.00 0.00 36.88 4.41
1203 1637 1.080501 CAGACGACGACCATGCAGT 60.081 57.895 0.00 0.00 0.00 4.40
1204 1638 0.170339 CAGACGACGACCATGCAGTA 59.830 55.000 0.00 0.00 0.00 2.74
1617 2057 2.978010 CAAAGGCGGACGCTGGTT 60.978 61.111 16.72 5.30 41.60 3.67
1625 2065 3.446507 GGACGCTGGTTTATCCGAA 57.553 52.632 0.00 0.00 39.52 4.30
1626 2066 1.287425 GGACGCTGGTTTATCCGAAG 58.713 55.000 0.00 0.00 39.52 3.79
1627 2067 1.134907 GGACGCTGGTTTATCCGAAGA 60.135 52.381 0.00 0.00 39.52 2.87
1688 2138 7.658525 ATCATACTCTGTTCAAGTCTGATCT 57.341 36.000 0.00 0.00 36.43 2.75
1692 2142 5.537188 ACTCTGTTCAAGTCTGATCTTGTC 58.463 41.667 14.95 11.57 43.44 3.18
1696 2146 5.674525 TGTTCAAGTCTGATCTTGTCTGTT 58.325 37.500 14.95 0.00 43.44 3.16
1699 2149 7.768582 TGTTCAAGTCTGATCTTGTCTGTTTTA 59.231 33.333 14.95 0.00 43.44 1.52
1795 3302 6.202570 CCTCTCAGAGCTAGATAAAATTGCAC 59.797 42.308 0.00 0.00 0.00 4.57
1803 3310 5.220024 GCTAGATAAAATTGCACGCACAAAC 60.220 40.000 0.00 0.00 32.27 2.93
1804 3311 4.870363 AGATAAAATTGCACGCACAAACT 58.130 34.783 0.00 0.00 32.27 2.66
1806 3313 3.654952 AAAATTGCACGCACAAACTTG 57.345 38.095 0.00 0.00 32.27 3.16
1810 3317 0.028770 TGCACGCACAAACTTGCTAC 59.971 50.000 0.00 0.00 40.62 3.58
1811 3318 0.028770 GCACGCACAAACTTGCTACA 59.971 50.000 0.00 0.00 40.62 2.74
1814 3321 2.014128 ACGCACAAACTTGCTACAAGT 58.986 42.857 7.15 7.15 40.62 3.16
1815 3322 3.001838 CACGCACAAACTTGCTACAAGTA 59.998 43.478 12.98 0.00 40.62 2.24
1816 3323 3.813166 ACGCACAAACTTGCTACAAGTAT 59.187 39.130 12.98 2.21 40.62 2.12
1818 3325 5.467399 ACGCACAAACTTGCTACAAGTATTA 59.533 36.000 12.98 0.00 40.62 0.98
1819 3326 6.015504 CGCACAAACTTGCTACAAGTATTAG 58.984 40.000 12.98 6.61 40.62 1.73
1820 3327 6.128661 CGCACAAACTTGCTACAAGTATTAGA 60.129 38.462 12.98 0.00 40.62 2.10
1821 3328 7.413000 CGCACAAACTTGCTACAAGTATTAGAT 60.413 37.037 12.98 0.00 40.62 1.98
1822 3329 8.879759 GCACAAACTTGCTACAAGTATTAGATA 58.120 33.333 12.98 0.00 39.59 1.98
1835 3342 9.520204 ACAAGTATTAGATAAAATTGCATGCAC 57.480 29.630 22.58 7.02 0.00 4.57
1836 3343 9.518906 CAAGTATTAGATAAAATTGCATGCACA 57.481 29.630 22.58 12.41 0.00 4.57
1841 3348 8.830201 TTAGATAAAATTGCATGCACAAACTT 57.170 26.923 22.58 11.84 32.27 2.66
1842 3349 7.124347 AGATAAAATTGCATGCACAAACTTG 57.876 32.000 22.58 0.00 32.27 3.16
1843 3350 3.612472 AAATTGCATGCACAAACTTGC 57.388 38.095 22.58 0.73 43.31 4.01
1844 3351 2.536761 ATTGCATGCACAAACTTGCT 57.463 40.000 22.58 0.00 43.41 3.91
1845 3352 3.663995 ATTGCATGCACAAACTTGCTA 57.336 38.095 22.58 1.08 43.41 3.49
1846 3353 2.420628 TGCATGCACAAACTTGCTAC 57.579 45.000 18.46 0.00 43.41 3.58
1847 3354 1.955778 TGCATGCACAAACTTGCTACT 59.044 42.857 18.46 0.00 43.41 2.57
1848 3355 2.030893 TGCATGCACAAACTTGCTACTC 60.031 45.455 18.46 0.00 43.41 2.59
1849 3356 2.669391 GCATGCACAAACTTGCTACTCC 60.669 50.000 14.21 0.00 43.41 3.85
1850 3357 1.604604 TGCACAAACTTGCTACTCCC 58.395 50.000 0.00 0.00 43.41 4.30
1851 3358 1.142870 TGCACAAACTTGCTACTCCCT 59.857 47.619 0.00 0.00 43.41 4.20
1852 3359 1.807142 GCACAAACTTGCTACTCCCTC 59.193 52.381 0.00 0.00 39.59 4.30
1853 3360 2.427506 CACAAACTTGCTACTCCCTCC 58.572 52.381 0.00 0.00 0.00 4.30
1854 3361 2.054799 ACAAACTTGCTACTCCCTCCA 58.945 47.619 0.00 0.00 0.00 3.86
1855 3362 2.644798 ACAAACTTGCTACTCCCTCCAT 59.355 45.455 0.00 0.00 0.00 3.41
1856 3363 3.074538 ACAAACTTGCTACTCCCTCCATT 59.925 43.478 0.00 0.00 0.00 3.16
1857 3364 3.636153 AACTTGCTACTCCCTCCATTC 57.364 47.619 0.00 0.00 0.00 2.67
1858 3365 1.840635 ACTTGCTACTCCCTCCATTCC 59.159 52.381 0.00 0.00 0.00 3.01
1859 3366 1.839994 CTTGCTACTCCCTCCATTCCA 59.160 52.381 0.00 0.00 0.00 3.53
1860 3367 1.965414 TGCTACTCCCTCCATTCCAA 58.035 50.000 0.00 0.00 0.00 3.53
1861 3368 2.274542 TGCTACTCCCTCCATTCCAAA 58.725 47.619 0.00 0.00 0.00 3.28
1862 3369 2.647299 TGCTACTCCCTCCATTCCAAAA 59.353 45.455 0.00 0.00 0.00 2.44
1863 3370 3.269381 TGCTACTCCCTCCATTCCAAAAT 59.731 43.478 0.00 0.00 0.00 1.82
1864 3371 4.476846 TGCTACTCCCTCCATTCCAAAATA 59.523 41.667 0.00 0.00 0.00 1.40
1865 3372 5.066593 GCTACTCCCTCCATTCCAAAATAG 58.933 45.833 0.00 0.00 0.00 1.73
1866 3373 4.526438 ACTCCCTCCATTCCAAAATAGG 57.474 45.455 0.00 0.00 0.00 2.57
1867 3374 3.858638 ACTCCCTCCATTCCAAAATAGGT 59.141 43.478 0.00 0.00 0.00 3.08
1868 3375 4.210331 CTCCCTCCATTCCAAAATAGGTG 58.790 47.826 0.00 0.00 0.00 4.00
1869 3376 3.855599 TCCCTCCATTCCAAAATAGGTGA 59.144 43.478 0.00 0.00 0.00 4.02
1870 3377 3.954258 CCCTCCATTCCAAAATAGGTGAC 59.046 47.826 0.00 0.00 0.00 3.67
1871 3378 3.954258 CCTCCATTCCAAAATAGGTGACC 59.046 47.826 0.00 0.00 0.00 4.02
1872 3379 3.954258 CTCCATTCCAAAATAGGTGACCC 59.046 47.826 0.00 0.00 0.00 4.46
1873 3380 3.335183 TCCATTCCAAAATAGGTGACCCA 59.665 43.478 0.00 0.00 0.00 4.51
1874 3381 4.093011 CCATTCCAAAATAGGTGACCCAA 58.907 43.478 0.00 0.00 0.00 4.12
1875 3382 4.081697 CCATTCCAAAATAGGTGACCCAAC 60.082 45.833 0.00 0.00 0.00 3.77
1876 3383 4.463050 TTCCAAAATAGGTGACCCAACT 57.537 40.909 0.00 0.00 34.83 3.16
1877 3384 4.463050 TCCAAAATAGGTGACCCAACTT 57.537 40.909 0.00 0.00 31.86 2.66
1878 3385 4.810345 TCCAAAATAGGTGACCCAACTTT 58.190 39.130 0.00 0.00 31.86 2.66
1879 3386 4.586841 TCCAAAATAGGTGACCCAACTTTG 59.413 41.667 0.00 3.70 31.86 2.77
1880 3387 4.343814 CCAAAATAGGTGACCCAACTTTGT 59.656 41.667 0.00 0.00 31.86 2.83
1881 3388 5.536916 CCAAAATAGGTGACCCAACTTTGTA 59.463 40.000 0.00 0.00 31.86 2.41
1882 3389 6.443792 CAAAATAGGTGACCCAACTTTGTAC 58.556 40.000 0.00 0.00 31.86 2.90
1883 3390 5.578157 AATAGGTGACCCAACTTTGTACT 57.422 39.130 0.00 0.00 31.86 2.73
1884 3391 6.691255 AATAGGTGACCCAACTTTGTACTA 57.309 37.500 0.00 0.00 31.86 1.82
1885 3392 6.691255 ATAGGTGACCCAACTTTGTACTAA 57.309 37.500 0.00 0.00 31.86 2.24
1886 3393 4.969484 AGGTGACCCAACTTTGTACTAAG 58.031 43.478 14.42 14.42 0.00 2.18
1887 3394 4.411212 AGGTGACCCAACTTTGTACTAAGT 59.589 41.667 15.68 15.68 39.97 2.24
1888 3395 5.104235 AGGTGACCCAACTTTGTACTAAGTT 60.104 40.000 23.96 23.96 46.42 2.66
1889 3396 6.100134 AGGTGACCCAACTTTGTACTAAGTTA 59.900 38.462 27.33 14.13 44.33 2.24
1890 3397 6.426025 GGTGACCCAACTTTGTACTAAGTTAG 59.574 42.308 27.33 23.50 44.33 2.34
1891 3398 6.988580 GTGACCCAACTTTGTACTAAGTTAGT 59.011 38.462 27.33 25.69 44.33 2.24
1892 3399 8.143835 GTGACCCAACTTTGTACTAAGTTAGTA 58.856 37.037 27.33 17.12 44.33 1.82
1907 3414 9.227777 ACTAAGTTAGTACAAATTTGGGTCATC 57.772 33.333 21.74 8.42 37.23 2.92
1908 3415 9.449719 CTAAGTTAGTACAAATTTGGGTCATCT 57.550 33.333 21.74 10.32 0.00 2.90
1910 3417 9.975218 AAGTTAGTACAAATTTGGGTCATCTAT 57.025 29.630 21.74 0.60 0.00 1.98
1911 3418 9.975218 AGTTAGTACAAATTTGGGTCATCTATT 57.025 29.630 21.74 3.59 0.00 1.73
1919 3426 9.236691 CAAATTTGGGTCATCTATTATGAAACG 57.763 33.333 10.49 0.00 0.00 3.60
1920 3427 6.935741 TTTGGGTCATCTATTATGAAACGG 57.064 37.500 0.00 0.00 0.00 4.44
1921 3428 5.880164 TGGGTCATCTATTATGAAACGGA 57.120 39.130 0.00 0.00 0.00 4.69
1922 3429 5.853936 TGGGTCATCTATTATGAAACGGAG 58.146 41.667 0.00 0.00 0.00 4.63
1923 3430 5.221641 TGGGTCATCTATTATGAAACGGAGG 60.222 44.000 0.00 0.00 0.00 4.30
1924 3431 5.011738 GGGTCATCTATTATGAAACGGAGGA 59.988 44.000 0.00 0.00 0.00 3.71
1925 3432 6.463897 GGGTCATCTATTATGAAACGGAGGAA 60.464 42.308 0.00 0.00 0.00 3.36
1926 3433 6.647067 GGTCATCTATTATGAAACGGAGGAAG 59.353 42.308 0.00 0.00 0.00 3.46
1927 3434 7.210873 GTCATCTATTATGAAACGGAGGAAGT 58.789 38.462 0.00 0.00 0.00 3.01
1928 3435 8.358148 GTCATCTATTATGAAACGGAGGAAGTA 58.642 37.037 0.00 0.00 0.00 2.24
1929 3436 9.090103 TCATCTATTATGAAACGGAGGAAGTAT 57.910 33.333 0.00 0.00 0.00 2.12
1930 3437 9.144747 CATCTATTATGAAACGGAGGAAGTATG 57.855 37.037 0.00 0.00 0.00 2.39
1931 3438 8.246430 TCTATTATGAAACGGAGGAAGTATGT 57.754 34.615 0.00 0.00 0.00 2.29
1932 3439 8.358148 TCTATTATGAAACGGAGGAAGTATGTC 58.642 37.037 0.00 0.00 0.00 3.06
1933 3440 3.604875 TGAAACGGAGGAAGTATGTCC 57.395 47.619 0.00 0.00 38.03 4.02
1944 3451 6.969993 AGGAAGTATGTCCTATCTTGAGTC 57.030 41.667 0.00 0.00 46.69 3.36
1945 3452 5.533154 AGGAAGTATGTCCTATCTTGAGTCG 59.467 44.000 0.00 0.00 46.69 4.18
1946 3453 5.278561 GGAAGTATGTCCTATCTTGAGTCGG 60.279 48.000 0.00 0.00 34.56 4.79
1947 3454 3.570550 AGTATGTCCTATCTTGAGTCGGC 59.429 47.826 0.00 0.00 0.00 5.54
1948 3455 1.847328 TGTCCTATCTTGAGTCGGCA 58.153 50.000 0.00 0.00 0.00 5.69
1949 3456 1.476891 TGTCCTATCTTGAGTCGGCAC 59.523 52.381 0.00 0.00 0.00 5.01
1950 3457 1.476891 GTCCTATCTTGAGTCGGCACA 59.523 52.381 0.00 0.00 0.00 4.57
1951 3458 2.101582 GTCCTATCTTGAGTCGGCACAT 59.898 50.000 0.00 0.00 0.00 3.21
1952 3459 2.362397 TCCTATCTTGAGTCGGCACATC 59.638 50.000 0.00 0.00 0.00 3.06
1953 3460 2.101415 CCTATCTTGAGTCGGCACATCA 59.899 50.000 0.00 0.00 0.00 3.07
1954 3461 2.996249 ATCTTGAGTCGGCACATCAT 57.004 45.000 0.00 0.00 0.00 2.45
1955 3462 4.021981 CCTATCTTGAGTCGGCACATCATA 60.022 45.833 0.00 0.00 0.00 2.15
1956 3463 3.165058 TCTTGAGTCGGCACATCATAC 57.835 47.619 0.00 0.00 0.00 2.39
1957 3464 2.159099 TCTTGAGTCGGCACATCATACC 60.159 50.000 0.00 0.00 0.00 2.73
1958 3465 1.485124 TGAGTCGGCACATCATACCT 58.515 50.000 0.00 0.00 0.00 3.08
1959 3466 1.831106 TGAGTCGGCACATCATACCTT 59.169 47.619 0.00 0.00 0.00 3.50
1960 3467 2.236146 TGAGTCGGCACATCATACCTTT 59.764 45.455 0.00 0.00 0.00 3.11
1961 3468 2.866762 GAGTCGGCACATCATACCTTTC 59.133 50.000 0.00 0.00 0.00 2.62
1962 3469 1.593006 GTCGGCACATCATACCTTTCG 59.407 52.381 0.00 0.00 0.00 3.46
1963 3470 1.478916 TCGGCACATCATACCTTTCGA 59.521 47.619 0.00 0.00 0.00 3.71
1964 3471 1.860950 CGGCACATCATACCTTTCGAG 59.139 52.381 0.00 0.00 0.00 4.04
1972 3479 6.359883 CACATCATACCTTTCGAGTACATACG 59.640 42.308 0.00 0.00 0.00 3.06
1973 3480 4.852138 TCATACCTTTCGAGTACATACGC 58.148 43.478 0.00 0.00 0.00 4.42
1976 3483 4.548991 ACCTTTCGAGTACATACGCTAG 57.451 45.455 0.00 0.00 0.00 3.42
1977 3484 4.194640 ACCTTTCGAGTACATACGCTAGA 58.805 43.478 0.00 0.00 0.00 2.43
1980 3487 6.183360 ACCTTTCGAGTACATACGCTAGAAAT 60.183 38.462 0.00 0.00 36.37 2.17
1981 3488 6.360148 CCTTTCGAGTACATACGCTAGAAATC 59.640 42.308 0.00 0.00 36.37 2.17
1982 3489 6.615264 TTCGAGTACATACGCTAGAAATCT 57.385 37.500 0.00 0.00 0.00 2.40
1983 3490 7.719778 TTCGAGTACATACGCTAGAAATCTA 57.280 36.000 0.00 0.00 0.00 1.98
1984 3491 7.902387 TCGAGTACATACGCTAGAAATCTAT 57.098 36.000 0.00 0.00 0.00 1.98
1985 3492 8.992835 TCGAGTACATACGCTAGAAATCTATA 57.007 34.615 0.00 0.00 0.00 1.31
1989 3496 9.823098 AGTACATACGCTAGAAATCTATAAACG 57.177 33.333 0.00 0.00 0.00 3.60
1990 3497 9.059485 GTACATACGCTAGAAATCTATAAACGG 57.941 37.037 0.00 0.00 0.00 4.44
1992 3499 8.521176 ACATACGCTAGAAATCTATAAACGGAT 58.479 33.333 0.00 0.00 0.00 4.18
2002 3509 2.941891 ATAAACGGATATTGCACGCG 57.058 45.000 3.53 3.53 0.00 6.01
2013 3520 2.173020 TGCACGCGCATACATCCAG 61.173 57.895 5.73 0.00 45.36 3.86
2014 3521 2.628106 CACGCGCATACATCCAGC 59.372 61.111 5.73 0.00 0.00 4.85
2015 3522 2.588877 ACGCGCATACATCCAGCC 60.589 61.111 5.73 0.00 0.00 4.85
2016 3523 3.705638 CGCGCATACATCCAGCCG 61.706 66.667 8.75 0.00 0.00 5.52
2017 3524 2.280119 GCGCATACATCCAGCCGA 60.280 61.111 0.30 0.00 0.00 5.54
2018 3525 2.313172 GCGCATACATCCAGCCGAG 61.313 63.158 0.30 0.00 0.00 4.63
2019 3526 1.068083 CGCATACATCCAGCCGAGT 59.932 57.895 0.00 0.00 0.00 4.18
2020 3527 0.313987 CGCATACATCCAGCCGAGTA 59.686 55.000 0.00 0.00 0.00 2.59
2021 3528 1.269569 CGCATACATCCAGCCGAGTAA 60.270 52.381 0.00 0.00 0.00 2.24
2022 3529 2.801699 CGCATACATCCAGCCGAGTAAA 60.802 50.000 0.00 0.00 0.00 2.01
2023 3530 3.403038 GCATACATCCAGCCGAGTAAAT 58.597 45.455 0.00 0.00 0.00 1.40
2024 3531 3.815401 GCATACATCCAGCCGAGTAAATT 59.185 43.478 0.00 0.00 0.00 1.82
2026 3533 5.120830 GCATACATCCAGCCGAGTAAATTAG 59.879 44.000 0.00 0.00 0.00 1.73
2027 3534 6.455647 CATACATCCAGCCGAGTAAATTAGA 58.544 40.000 0.00 0.00 0.00 2.10
2028 3535 5.353394 ACATCCAGCCGAGTAAATTAGAA 57.647 39.130 0.00 0.00 0.00 2.10
2029 3536 5.741011 ACATCCAGCCGAGTAAATTAGAAA 58.259 37.500 0.00 0.00 0.00 2.52
2030 3537 6.177610 ACATCCAGCCGAGTAAATTAGAAAA 58.822 36.000 0.00 0.00 0.00 2.29
2031 3538 6.657541 ACATCCAGCCGAGTAAATTAGAAAAA 59.342 34.615 0.00 0.00 0.00 1.94
2052 3559 4.379339 AACACCGTAATTGTGCAAAAGT 57.621 36.364 0.00 0.00 37.22 2.66
2053 3560 3.959943 ACACCGTAATTGTGCAAAAGTC 58.040 40.909 0.00 0.00 37.22 3.01
2054 3561 3.378742 ACACCGTAATTGTGCAAAAGTCA 59.621 39.130 0.00 0.00 37.22 3.41
2055 3562 4.037446 ACACCGTAATTGTGCAAAAGTCAT 59.963 37.500 0.00 0.00 37.22 3.06
2056 3563 4.616802 CACCGTAATTGTGCAAAAGTCATC 59.383 41.667 0.00 0.00 0.00 2.92
2058 3565 5.218885 CCGTAATTGTGCAAAAGTCATCAA 58.781 37.500 0.00 0.00 0.00 2.57
2060 3567 6.345723 CCGTAATTGTGCAAAAGTCATCAAAC 60.346 38.462 0.00 0.00 0.00 2.93
2061 3568 6.198029 CGTAATTGTGCAAAAGTCATCAAACA 59.802 34.615 0.00 0.00 0.00 2.83
2062 3569 7.096106 CGTAATTGTGCAAAAGTCATCAAACAT 60.096 33.333 0.00 0.00 0.00 2.71
2063 3570 6.774354 ATTGTGCAAAAGTCATCAAACATC 57.226 33.333 0.00 0.00 0.00 3.06
2064 3571 5.259832 TGTGCAAAAGTCATCAAACATCA 57.740 34.783 0.00 0.00 0.00 3.07
2065 3572 5.658468 TGTGCAAAAGTCATCAAACATCAA 58.342 33.333 0.00 0.00 0.00 2.57
2066 3573 6.104665 TGTGCAAAAGTCATCAAACATCAAA 58.895 32.000 0.00 0.00 0.00 2.69
2067 3574 6.035866 TGTGCAAAAGTCATCAAACATCAAAC 59.964 34.615 0.00 0.00 0.00 2.93
2068 3575 6.035866 GTGCAAAAGTCATCAAACATCAAACA 59.964 34.615 0.00 0.00 0.00 2.83
2069 3576 6.762187 TGCAAAAGTCATCAAACATCAAACAT 59.238 30.769 0.00 0.00 0.00 2.71
2070 3577 7.042590 TGCAAAAGTCATCAAACATCAAACATC 60.043 33.333 0.00 0.00 0.00 3.06
2072 3579 5.300969 AGTCATCAAACATCAAACATCCG 57.699 39.130 0.00 0.00 0.00 4.18
2073 3580 5.003160 AGTCATCAAACATCAAACATCCGA 58.997 37.500 0.00 0.00 0.00 4.55
2074 3581 5.088739 GTCATCAAACATCAAACATCCGAC 58.911 41.667 0.00 0.00 0.00 4.79
2075 3582 4.759183 TCATCAAACATCAAACATCCGACA 59.241 37.500 0.00 0.00 0.00 4.35
2076 3583 5.240403 TCATCAAACATCAAACATCCGACAA 59.760 36.000 0.00 0.00 0.00 3.18
2077 3584 5.506686 TCAAACATCAAACATCCGACAAA 57.493 34.783 0.00 0.00 0.00 2.83
2078 3585 5.895928 TCAAACATCAAACATCCGACAAAA 58.104 33.333 0.00 0.00 0.00 2.44
2079 3586 6.511416 TCAAACATCAAACATCCGACAAAAT 58.489 32.000 0.00 0.00 0.00 1.82
2080 3587 6.420306 TCAAACATCAAACATCCGACAAAATG 59.580 34.615 0.00 0.00 0.00 2.32
2081 3588 4.236935 ACATCAAACATCCGACAAAATGC 58.763 39.130 0.00 0.00 0.00 3.56
2082 3589 3.998099 TCAAACATCCGACAAAATGCA 57.002 38.095 0.00 0.00 0.00 3.96
2083 3590 4.517952 TCAAACATCCGACAAAATGCAT 57.482 36.364 0.00 0.00 0.00 3.96
2084 3591 4.236147 TCAAACATCCGACAAAATGCATG 58.764 39.130 0.00 0.00 0.00 4.06
2085 3592 3.940209 AACATCCGACAAAATGCATGT 57.060 38.095 0.00 0.00 0.00 3.21
2087 3594 4.255833 ACATCCGACAAAATGCATGTTT 57.744 36.364 0.00 0.32 0.00 2.83
2089 3596 4.685628 ACATCCGACAAAATGCATGTTTTC 59.314 37.500 0.00 2.31 0.00 2.29
2090 3597 4.582701 TCCGACAAAATGCATGTTTTCT 57.417 36.364 12.74 0.00 0.00 2.52
2091 3598 4.297510 TCCGACAAAATGCATGTTTTCTG 58.702 39.130 12.74 7.36 0.00 3.02
2093 3600 4.925054 CCGACAAAATGCATGTTTTCTGAT 59.075 37.500 12.74 0.00 0.00 2.90
2095 3602 5.164031 CGACAAAATGCATGTTTTCTGATGG 60.164 40.000 12.74 0.00 0.00 3.51
2096 3603 5.613329 ACAAAATGCATGTTTTCTGATGGT 58.387 33.333 0.00 0.00 0.00 3.55
2097 3604 6.056884 ACAAAATGCATGTTTTCTGATGGTT 58.943 32.000 0.00 0.00 0.00 3.67
2098 3605 6.543100 ACAAAATGCATGTTTTCTGATGGTTT 59.457 30.769 0.00 0.00 0.00 3.27
2099 3606 7.067251 ACAAAATGCATGTTTTCTGATGGTTTT 59.933 29.630 0.00 0.00 0.00 2.43
2100 3607 7.571080 AAATGCATGTTTTCTGATGGTTTTT 57.429 28.000 0.00 0.00 0.00 1.94
2101 3608 6.790285 ATGCATGTTTTCTGATGGTTTTTC 57.210 33.333 0.00 0.00 0.00 2.29
2102 3609 5.916318 TGCATGTTTTCTGATGGTTTTTCT 58.084 33.333 0.00 0.00 0.00 2.52
2103 3610 6.347696 TGCATGTTTTCTGATGGTTTTTCTT 58.652 32.000 0.00 0.00 0.00 2.52
2104 3611 6.258287 TGCATGTTTTCTGATGGTTTTTCTTG 59.742 34.615 0.00 0.00 0.00 3.02
2105 3612 6.479660 GCATGTTTTCTGATGGTTTTTCTTGA 59.520 34.615 0.00 0.00 0.00 3.02
2106 3613 7.011295 GCATGTTTTCTGATGGTTTTTCTTGAA 59.989 33.333 0.00 0.00 0.00 2.69
2107 3614 8.545420 CATGTTTTCTGATGGTTTTTCTTGAAG 58.455 33.333 0.00 0.00 0.00 3.02
2108 3615 6.534793 TGTTTTCTGATGGTTTTTCTTGAAGC 59.465 34.615 0.00 0.00 0.00 3.86
2109 3616 6.469782 TTTCTGATGGTTTTTCTTGAAGCT 57.530 33.333 0.00 0.00 0.00 3.74
2110 3617 5.443185 TCTGATGGTTTTTCTTGAAGCTG 57.557 39.130 0.00 0.00 0.00 4.24
2111 3618 3.981211 TGATGGTTTTTCTTGAAGCTGC 58.019 40.909 0.00 0.00 0.00 5.25
2112 3619 2.888834 TGGTTTTTCTTGAAGCTGCC 57.111 45.000 0.00 0.00 0.00 4.85
2113 3620 1.412343 TGGTTTTTCTTGAAGCTGCCC 59.588 47.619 0.00 0.00 0.00 5.36
2115 3622 2.158971 GGTTTTTCTTGAAGCTGCCCAA 60.159 45.455 0.00 0.18 0.00 4.12
2116 3623 3.494924 GGTTTTTCTTGAAGCTGCCCAAT 60.495 43.478 0.00 0.00 0.00 3.16
2119 3626 1.999648 TCTTGAAGCTGCCCAATTGT 58.000 45.000 4.43 0.00 0.00 2.71
2122 3629 1.927487 TGAAGCTGCCCAATTGTGAT 58.073 45.000 4.43 0.00 0.00 3.06
2123 3630 1.546923 TGAAGCTGCCCAATTGTGATG 59.453 47.619 4.43 0.00 0.00 3.07
2134 3641 5.212532 CCAATTGTGATGGGTTCTTTTCA 57.787 39.130 4.43 0.00 34.15 2.69
2135 3642 5.609423 CCAATTGTGATGGGTTCTTTTCAA 58.391 37.500 4.43 0.00 34.15 2.69
2136 3643 6.232692 CCAATTGTGATGGGTTCTTTTCAAT 58.767 36.000 4.43 0.00 34.15 2.57
2137 3644 6.711645 CCAATTGTGATGGGTTCTTTTCAATT 59.288 34.615 4.43 0.00 35.56 2.32
2138 3645 7.229106 CCAATTGTGATGGGTTCTTTTCAATTT 59.771 33.333 4.43 0.00 33.82 1.82
2139 3646 9.270640 CAATTGTGATGGGTTCTTTTCAATTTA 57.729 29.630 0.00 0.00 33.82 1.40
2140 3647 8.831715 ATTGTGATGGGTTCTTTTCAATTTAC 57.168 30.769 0.00 0.00 0.00 2.01
2141 3648 7.595819 TGTGATGGGTTCTTTTCAATTTACT 57.404 32.000 0.00 0.00 0.00 2.24
2142 3649 7.657336 TGTGATGGGTTCTTTTCAATTTACTC 58.343 34.615 0.00 0.00 0.00 2.59
2143 3650 7.090808 GTGATGGGTTCTTTTCAATTTACTCC 58.909 38.462 0.00 0.00 0.00 3.85
2144 3651 6.780031 TGATGGGTTCTTTTCAATTTACTCCA 59.220 34.615 0.00 0.00 0.00 3.86
2145 3652 7.454380 TGATGGGTTCTTTTCAATTTACTCCAT 59.546 33.333 0.00 0.00 33.42 3.41
2146 3653 7.227049 TGGGTTCTTTTCAATTTACTCCATC 57.773 36.000 0.00 0.00 0.00 3.51
2147 3654 6.210584 TGGGTTCTTTTCAATTTACTCCATCC 59.789 38.462 0.00 0.00 0.00 3.51
2148 3655 6.210584 GGGTTCTTTTCAATTTACTCCATCCA 59.789 38.462 0.00 0.00 0.00 3.41
2149 3656 7.315890 GGTTCTTTTCAATTTACTCCATCCAG 58.684 38.462 0.00 0.00 0.00 3.86
2150 3657 7.315890 GTTCTTTTCAATTTACTCCATCCAGG 58.684 38.462 0.00 0.00 39.47 4.45
2151 3658 5.418840 TCTTTTCAATTTACTCCATCCAGGC 59.581 40.000 0.00 0.00 37.29 4.85
2152 3659 4.314522 TTCAATTTACTCCATCCAGGCA 57.685 40.909 0.00 0.00 37.29 4.75
2153 3660 3.889815 TCAATTTACTCCATCCAGGCAG 58.110 45.455 0.00 0.00 37.29 4.85
2154 3661 3.523157 TCAATTTACTCCATCCAGGCAGA 59.477 43.478 0.00 0.00 37.29 4.26
2155 3662 4.166725 TCAATTTACTCCATCCAGGCAGAT 59.833 41.667 0.00 0.00 37.29 2.90
2156 3663 5.369404 TCAATTTACTCCATCCAGGCAGATA 59.631 40.000 0.00 0.00 37.29 1.98
2157 3664 5.912149 ATTTACTCCATCCAGGCAGATAA 57.088 39.130 0.00 0.00 37.29 1.75
2158 3665 4.689612 TTACTCCATCCAGGCAGATAAC 57.310 45.455 0.00 0.00 37.29 1.89
2159 3666 2.769209 ACTCCATCCAGGCAGATAACT 58.231 47.619 0.00 0.00 37.29 2.24
2160 3667 2.703007 ACTCCATCCAGGCAGATAACTC 59.297 50.000 0.00 0.00 37.29 3.01
2161 3668 2.702478 CTCCATCCAGGCAGATAACTCA 59.298 50.000 0.00 0.00 37.29 3.41
2162 3669 3.114606 TCCATCCAGGCAGATAACTCAA 58.885 45.455 0.00 0.00 37.29 3.02
2163 3670 3.523157 TCCATCCAGGCAGATAACTCAAA 59.477 43.478 0.00 0.00 37.29 2.69
2164 3671 3.629398 CCATCCAGGCAGATAACTCAAAC 59.371 47.826 0.00 0.00 0.00 2.93
2165 3672 4.264253 CATCCAGGCAGATAACTCAAACA 58.736 43.478 0.00 0.00 0.00 2.83
2166 3673 3.942829 TCCAGGCAGATAACTCAAACAG 58.057 45.455 0.00 0.00 0.00 3.16
2167 3674 3.327757 TCCAGGCAGATAACTCAAACAGT 59.672 43.478 0.00 0.00 36.64 3.55
2178 3685 3.926616 ACTCAAACAGTTATCCAGACCG 58.073 45.455 0.00 0.00 26.56 4.79
2179 3686 2.673368 CTCAAACAGTTATCCAGACCGC 59.327 50.000 0.00 0.00 0.00 5.68
2180 3687 2.037902 TCAAACAGTTATCCAGACCGCA 59.962 45.455 0.00 0.00 0.00 5.69
2181 3688 2.811431 CAAACAGTTATCCAGACCGCAA 59.189 45.455 0.00 0.00 0.00 4.85
2182 3689 2.851263 ACAGTTATCCAGACCGCAAA 57.149 45.000 0.00 0.00 0.00 3.68
2183 3690 3.134574 ACAGTTATCCAGACCGCAAAA 57.865 42.857 0.00 0.00 0.00 2.44
2184 3691 3.074412 ACAGTTATCCAGACCGCAAAAG 58.926 45.455 0.00 0.00 0.00 2.27
2185 3692 3.244422 ACAGTTATCCAGACCGCAAAAGA 60.244 43.478 0.00 0.00 0.00 2.52
2189 3696 2.631160 TCCAGACCGCAAAAGAAAGA 57.369 45.000 0.00 0.00 0.00 2.52
2193 3700 4.158764 TCCAGACCGCAAAAGAAAGAAAAA 59.841 37.500 0.00 0.00 0.00 1.94
2194 3701 4.504097 CCAGACCGCAAAAGAAAGAAAAAG 59.496 41.667 0.00 0.00 0.00 2.27
2197 3704 3.196901 ACCGCAAAAGAAAGAAAAAGGGT 59.803 39.130 0.00 0.00 0.00 4.34
2215 3722 1.639108 GGTTACCCAACTGGATCCCTT 59.361 52.381 9.90 0.00 37.39 3.95
2216 3723 2.356844 GGTTACCCAACTGGATCCCTTC 60.357 54.545 9.90 0.00 37.39 3.46
2217 3724 1.591768 TACCCAACTGGATCCCTTCC 58.408 55.000 9.90 0.00 45.69 3.46
2218 3725 0.178831 ACCCAACTGGATCCCTTCCT 60.179 55.000 9.90 0.00 45.68 3.36
2219 3726 0.548510 CCCAACTGGATCCCTTCCTC 59.451 60.000 9.90 0.00 45.68 3.71
2220 3727 0.548510 CCAACTGGATCCCTTCCTCC 59.451 60.000 9.90 0.00 45.68 4.30
2221 3728 1.589414 CAACTGGATCCCTTCCTCCT 58.411 55.000 9.90 0.00 45.68 3.69
2222 3729 1.488393 CAACTGGATCCCTTCCTCCTC 59.512 57.143 9.90 0.00 45.68 3.71
2235 3742 4.263683 CCTTCCTCCTCCATTTTGTCTCTT 60.264 45.833 0.00 0.00 0.00 2.85
2243 3751 5.587844 CCTCCATTTTGTCTCTTATGTCTGG 59.412 44.000 0.00 0.00 0.00 3.86
2245 3753 5.250543 TCCATTTTGTCTCTTATGTCTGGGA 59.749 40.000 0.00 0.00 0.00 4.37
2250 3758 6.672266 TTGTCTCTTATGTCTGGGATATCC 57.328 41.667 13.87 13.87 0.00 2.59
2266 3774 5.055144 GGATATCCGTAAACCCTCAAACTC 58.945 45.833 5.86 0.00 0.00 3.01
2269 3777 1.804748 CCGTAAACCCTCAAACTCAGC 59.195 52.381 0.00 0.00 0.00 4.26
2276 3784 2.092212 ACCCTCAAACTCAGCCCATATG 60.092 50.000 0.00 0.00 0.00 1.78
2277 3785 1.952296 CCTCAAACTCAGCCCATATGC 59.048 52.381 0.00 0.00 0.00 3.14
2292 3801 2.919772 TATGCGGGAGGATATGAGGA 57.080 50.000 0.00 0.00 42.52 3.71
2294 3803 1.179174 TGCGGGAGGATATGAGGACG 61.179 60.000 0.00 0.00 0.00 4.79
2297 3806 1.545875 CGGGAGGATATGAGGACGTCT 60.546 57.143 16.46 0.90 0.00 4.18
2299 3808 2.489255 GGGAGGATATGAGGACGTCTGA 60.489 54.545 16.46 0.00 0.00 3.27
2305 3814 5.129485 AGGATATGAGGACGTCTGAAAATGT 59.871 40.000 16.46 1.32 0.00 2.71
2307 3816 4.543590 ATGAGGACGTCTGAAAATGTCT 57.456 40.909 16.46 0.00 35.82 3.41
2316 3826 4.569943 GTCTGAAAATGTCTAGCAGTCCA 58.430 43.478 0.00 0.00 0.00 4.02
2321 3831 0.532573 ATGTCTAGCAGTCCACCACG 59.467 55.000 0.00 0.00 0.00 4.94
2324 3834 1.154016 CTAGCAGTCCACCACGTCG 60.154 63.158 0.00 0.00 0.00 5.12
2352 3863 2.158813 TCCATTCGGCCCACTTTATCTC 60.159 50.000 0.00 0.00 0.00 2.75
2356 3867 3.644966 TCGGCCCACTTTATCTCATTT 57.355 42.857 0.00 0.00 0.00 2.32
2397 3914 6.671605 TCTTTTCATCCCCATCAATCACATA 58.328 36.000 0.00 0.00 0.00 2.29
2403 3920 6.265876 TCATCCCCATCAATCACATACATTTG 59.734 38.462 0.00 0.00 0.00 2.32
2405 3922 5.593909 TCCCCATCAATCACATACATTTGAC 59.406 40.000 0.00 0.00 31.45 3.18
2406 3923 5.221303 CCCCATCAATCACATACATTTGACC 60.221 44.000 0.00 0.00 31.45 4.02
2408 3925 5.506151 CCATCAATCACATACATTTGACCGG 60.506 44.000 0.00 0.00 31.45 5.28
2409 3926 4.837972 TCAATCACATACATTTGACCGGA 58.162 39.130 9.46 0.00 0.00 5.14
2410 3927 5.436175 TCAATCACATACATTTGACCGGAT 58.564 37.500 9.46 0.00 0.00 4.18
2411 3928 6.587273 TCAATCACATACATTTGACCGGATA 58.413 36.000 9.46 0.00 0.00 2.59
2413 3930 7.719193 TCAATCACATACATTTGACCGGATAAT 59.281 33.333 9.46 1.04 0.00 1.28
2415 3932 7.873719 TCACATACATTTGACCGGATAATTT 57.126 32.000 9.46 0.11 0.00 1.82
2416 3933 7.702386 TCACATACATTTGACCGGATAATTTG 58.298 34.615 9.46 6.43 0.00 2.32
2417 3934 7.554476 TCACATACATTTGACCGGATAATTTGA 59.446 33.333 9.46 0.00 0.00 2.69
2418 3935 7.857389 CACATACATTTGACCGGATAATTTGAG 59.143 37.037 9.46 0.00 0.00 3.02
2419 3936 5.835113 ACATTTGACCGGATAATTTGAGG 57.165 39.130 9.46 0.00 0.00 3.86
2420 3937 4.644685 ACATTTGACCGGATAATTTGAGGG 59.355 41.667 9.46 0.00 0.00 4.30
2421 3938 4.577988 TTTGACCGGATAATTTGAGGGA 57.422 40.909 9.46 0.00 0.00 4.20
2422 3939 4.788925 TTGACCGGATAATTTGAGGGAT 57.211 40.909 9.46 0.00 0.00 3.85
2423 3940 5.897851 TTGACCGGATAATTTGAGGGATA 57.102 39.130 9.46 0.00 0.00 2.59
2424 3941 6.448369 TTGACCGGATAATTTGAGGGATAT 57.552 37.500 9.46 0.00 0.00 1.63
2426 3943 7.182817 TGACCGGATAATTTGAGGGATATAG 57.817 40.000 9.46 0.00 0.00 1.31
2430 3947 6.316390 CCGGATAATTTGAGGGATATAGTTGC 59.684 42.308 0.00 0.00 0.00 4.17
2434 3951 2.526304 TGAGGGATATAGTTGCGTGC 57.474 50.000 0.00 0.00 0.00 5.34
2440 3957 3.058914 GGGATATAGTTGCGTGCATGAAC 60.059 47.826 10.93 11.08 0.00 3.18
2441 3958 3.362986 GGATATAGTTGCGTGCATGAACG 60.363 47.826 22.40 22.40 46.30 3.95
2442 3959 1.720805 ATAGTTGCGTGCATGAACGA 58.279 45.000 30.43 12.09 46.49 3.85
2456 3973 2.248248 TGAACGATGAGGGTTCAGAGT 58.752 47.619 3.44 0.00 46.33 3.24
2457 3974 2.029020 TGAACGATGAGGGTTCAGAGTG 60.029 50.000 3.44 0.00 46.33 3.51
2458 3975 0.898320 ACGATGAGGGTTCAGAGTGG 59.102 55.000 0.00 0.00 36.61 4.00
2462 3979 1.048601 TGAGGGTTCAGAGTGGACAC 58.951 55.000 0.00 0.00 0.00 3.67
2463 3980 0.038159 GAGGGTTCAGAGTGGACACG 60.038 60.000 0.00 0.00 36.20 4.49
2465 3982 1.668151 GGTTCAGAGTGGACACGCC 60.668 63.158 2.54 0.00 36.20 5.68
2466 3983 1.668151 GTTCAGAGTGGACACGCCC 60.668 63.158 2.54 0.00 36.20 6.13
2467 3984 3.220999 TTCAGAGTGGACACGCCCG 62.221 63.158 2.54 0.00 36.20 6.13
2468 3985 4.742201 CAGAGTGGACACGCCCGG 62.742 72.222 0.00 0.00 36.20 5.73
2473 3990 3.632080 TGGACACGCCCGGACATT 61.632 61.111 0.73 0.00 34.97 2.71
2474 3991 3.124921 GGACACGCCCGGACATTG 61.125 66.667 0.73 0.00 0.00 2.82
2475 3992 2.358247 GACACGCCCGGACATTGT 60.358 61.111 0.73 0.00 0.00 2.71
2476 3993 2.358247 ACACGCCCGGACATTGTC 60.358 61.111 0.73 8.34 0.00 3.18
2477 3994 2.047274 CACGCCCGGACATTGTCT 60.047 61.111 16.02 0.00 32.47 3.41
2478 3995 1.216977 CACGCCCGGACATTGTCTA 59.783 57.895 16.02 0.00 32.47 2.59
2479 3996 0.806102 CACGCCCGGACATTGTCTAG 60.806 60.000 16.02 10.46 32.47 2.43
2480 3997 0.968901 ACGCCCGGACATTGTCTAGA 60.969 55.000 16.02 0.00 32.47 2.43
2481 3998 0.527817 CGCCCGGACATTGTCTAGAC 60.528 60.000 16.32 16.32 32.47 2.59
2482 3999 0.535335 GCCCGGACATTGTCTAGACA 59.465 55.000 21.74 21.74 39.98 3.41
2483 4000 1.139058 GCCCGGACATTGTCTAGACAT 59.861 52.381 25.68 11.77 41.52 3.06
2484 4001 2.364324 GCCCGGACATTGTCTAGACATA 59.636 50.000 25.68 16.41 41.52 2.29
2485 4002 3.006967 GCCCGGACATTGTCTAGACATAT 59.993 47.826 25.68 17.77 41.52 1.78
2486 4003 4.219944 GCCCGGACATTGTCTAGACATATA 59.780 45.833 25.68 12.14 41.52 0.86
2487 4004 5.105310 GCCCGGACATTGTCTAGACATATAT 60.105 44.000 25.68 13.93 41.52 0.86
2491 4008 6.628175 CGGACATTGTCTAGACATATATGGGG 60.628 46.154 27.69 17.63 41.52 4.96
2496 4013 5.865085 TGTCTAGACATATATGGGGCAAAC 58.135 41.667 21.74 8.16 36.21 2.93
2508 4025 1.017387 GGGCAAACTAGCTCAATCCG 58.983 55.000 0.00 0.00 34.32 4.18
2509 4026 1.679032 GGGCAAACTAGCTCAATCCGT 60.679 52.381 0.00 0.00 34.32 4.69
2510 4027 1.666189 GGCAAACTAGCTCAATCCGTC 59.334 52.381 0.00 0.00 34.17 4.79
2512 4029 3.003480 GCAAACTAGCTCAATCCGTCTT 58.997 45.455 0.00 0.00 0.00 3.01
2525 4042 6.507900 TCAATCCGTCTTTAGATGCTCTAAG 58.492 40.000 5.98 0.00 39.80 2.18
2526 4043 6.321435 TCAATCCGTCTTTAGATGCTCTAAGA 59.679 38.462 5.98 0.00 39.80 2.10
2527 4044 5.759506 TCCGTCTTTAGATGCTCTAAGAG 57.240 43.478 5.98 0.00 39.80 2.85
2528 4045 4.580995 TCCGTCTTTAGATGCTCTAAGAGG 59.419 45.833 0.00 0.00 39.80 3.69
2529 4046 4.580995 CCGTCTTTAGATGCTCTAAGAGGA 59.419 45.833 0.00 0.00 39.80 3.71
2530 4047 5.242838 CCGTCTTTAGATGCTCTAAGAGGAT 59.757 44.000 2.29 2.29 43.17 3.24
2531 4048 6.431543 CCGTCTTTAGATGCTCTAAGAGGATA 59.568 42.308 2.48 0.00 40.67 2.59
2544 4061 7.904558 TCTAAGAGGATAAGAGCAAGAATGA 57.095 36.000 0.00 0.00 0.00 2.57
2564 4081 7.605691 AGAATGAAAGAGGTAATCACAACTCTG 59.394 37.037 0.00 0.00 40.01 3.35
2565 4082 6.174720 TGAAAGAGGTAATCACAACTCTGT 57.825 37.500 0.00 0.00 40.01 3.41
2566 4083 6.591935 TGAAAGAGGTAATCACAACTCTGTT 58.408 36.000 0.00 0.00 40.01 3.16
2570 4087 9.654663 AAAGAGGTAATCACAACTCTGTTATAC 57.345 33.333 0.00 0.00 40.01 1.47
2573 4090 8.147244 AGGTAATCACAACTCTGTTATACCTT 57.853 34.615 0.00 0.00 40.00 3.50
2574 4091 8.603304 AGGTAATCACAACTCTGTTATACCTTT 58.397 33.333 0.00 0.00 40.00 3.11
2575 4092 9.227777 GGTAATCACAACTCTGTTATACCTTTT 57.772 33.333 0.00 0.00 34.99 2.27
2638 4155 5.241728 AGGTTTTGGTGTGAAGAGCTATTTC 59.758 40.000 0.00 0.00 0.00 2.17
2645 4162 6.112058 GGTGTGAAGAGCTATTTCAGATTCT 58.888 40.000 12.13 0.00 35.39 2.40
2708 4230 4.233408 GCGAAGTGCTTTGCTTGG 57.767 55.556 14.97 0.00 44.51 3.61
2709 4231 1.654220 GCGAAGTGCTTTGCTTGGA 59.346 52.632 14.97 0.00 44.51 3.53
2710 4232 0.661483 GCGAAGTGCTTTGCTTGGAC 60.661 55.000 14.97 0.00 44.51 4.02
2711 4233 0.947244 CGAAGTGCTTTGCTTGGACT 59.053 50.000 0.00 0.00 37.71 3.85
2712 4234 1.334869 CGAAGTGCTTTGCTTGGACTT 59.665 47.619 9.74 9.74 46.09 3.01
2713 4235 2.735823 GAAGTGCTTTGCTTGGACTTG 58.264 47.619 13.37 0.00 44.08 3.16
2714 4236 1.767759 AGTGCTTTGCTTGGACTTGT 58.232 45.000 0.00 0.00 32.21 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
788 1096 2.944954 AAACCCCTACCCAGCCCC 60.945 66.667 0.00 0.00 0.00 5.80
789 1097 2.359011 CAAACCCCTACCCAGCCC 59.641 66.667 0.00 0.00 0.00 5.19
791 1099 1.001269 GACCAAACCCCTACCCAGC 60.001 63.158 0.00 0.00 0.00 4.85
792 1100 0.328258 CAGACCAAACCCCTACCCAG 59.672 60.000 0.00 0.00 0.00 4.45
793 1101 1.137594 CCAGACCAAACCCCTACCCA 61.138 60.000 0.00 0.00 0.00 4.51
839 1152 3.488489 CATTTTTCTCCGCTTGGTAACG 58.512 45.455 0.00 0.00 42.51 3.18
841 1154 2.887783 TGCATTTTTCTCCGCTTGGTAA 59.112 40.909 0.00 0.00 0.00 2.85
899 1220 4.027923 GCGCGGCCCACGTAAAAA 62.028 61.111 8.83 0.00 46.52 1.94
988 1326 4.112634 CGTATATATGGGAAGCGATGGTG 58.887 47.826 0.00 0.00 0.00 4.17
1016 1354 0.107703 TTTGGCAGGTATGAGAGGCG 60.108 55.000 0.00 0.00 0.00 5.52
1183 1617 3.545481 GCATGGTCGTCGTCTGCG 61.545 66.667 0.00 0.00 39.92 5.18
1184 1618 2.432456 TGCATGGTCGTCGTCTGC 60.432 61.111 0.00 0.00 0.00 4.26
1185 1619 0.170339 TACTGCATGGTCGTCGTCTG 59.830 55.000 0.00 0.00 0.00 3.51
1199 1633 2.222953 CCGCCGATTGTTTTACTACTGC 60.223 50.000 0.00 0.00 0.00 4.40
1200 1634 2.222953 GCCGCCGATTGTTTTACTACTG 60.223 50.000 0.00 0.00 0.00 2.74
1201 1635 2.004733 GCCGCCGATTGTTTTACTACT 58.995 47.619 0.00 0.00 0.00 2.57
1202 1636 2.004733 AGCCGCCGATTGTTTTACTAC 58.995 47.619 0.00 0.00 0.00 2.73
1203 1637 2.004017 CAGCCGCCGATTGTTTTACTA 58.996 47.619 0.00 0.00 0.00 1.82
1204 1638 0.802494 CAGCCGCCGATTGTTTTACT 59.198 50.000 0.00 0.00 0.00 2.24
1294 1734 3.978460 GAAGGCCTCGAGGATCTTC 57.022 57.895 32.71 32.71 38.66 2.87
1351 1791 3.303135 AGCTCGCGGTCCTTGTCA 61.303 61.111 6.13 0.00 0.00 3.58
1354 1794 3.997064 CTCCAGCTCGCGGTCCTTG 62.997 68.421 6.13 0.00 0.00 3.61
1617 2057 4.069304 CCCGCCAATAATTCTTCGGATAA 58.931 43.478 5.57 0.00 39.23 1.75
1623 2063 4.918810 ATCAACCCGCCAATAATTCTTC 57.081 40.909 0.00 0.00 0.00 2.87
1624 2064 5.418676 CAAATCAACCCGCCAATAATTCTT 58.581 37.500 0.00 0.00 0.00 2.52
1625 2065 4.680440 GCAAATCAACCCGCCAATAATTCT 60.680 41.667 0.00 0.00 0.00 2.40
1626 2066 3.555547 GCAAATCAACCCGCCAATAATTC 59.444 43.478 0.00 0.00 0.00 2.17
1627 2067 3.055530 TGCAAATCAACCCGCCAATAATT 60.056 39.130 0.00 0.00 0.00 1.40
1671 2121 5.069648 ACAGACAAGATCAGACTTGAACAGA 59.930 40.000 14.00 0.00 46.85 3.41
1761 3268 1.510383 CTCTGAGAGGCGAGTGTGG 59.490 63.158 0.36 0.00 0.00 4.17
1769 3276 5.179182 GCAATTTTATCTAGCTCTGAGAGGC 59.821 44.000 12.01 3.75 0.00 4.70
1810 3317 9.518906 TGTGCATGCAATTTTATCTAATACTTG 57.481 29.630 24.58 0.00 0.00 3.16
1815 3322 9.439500 AAGTTTGTGCATGCAATTTTATCTAAT 57.561 25.926 24.58 0.00 0.00 1.73
1816 3323 8.710551 CAAGTTTGTGCATGCAATTTTATCTAA 58.289 29.630 24.58 8.41 0.00 2.10
1818 3325 6.347888 GCAAGTTTGTGCATGCAATTTTATCT 60.348 34.615 24.58 11.47 44.29 1.98
1819 3326 5.791480 GCAAGTTTGTGCATGCAATTTTATC 59.209 36.000 24.58 8.72 44.29 1.75
1820 3327 5.691815 GCAAGTTTGTGCATGCAATTTTAT 58.308 33.333 24.58 5.13 44.29 1.40
1821 3328 5.093169 GCAAGTTTGTGCATGCAATTTTA 57.907 34.783 24.58 3.79 44.29 1.52
1822 3329 3.954999 GCAAGTTTGTGCATGCAATTTT 58.045 36.364 24.58 9.94 44.29 1.82
1823 3330 3.612472 GCAAGTTTGTGCATGCAATTT 57.388 38.095 24.58 7.41 44.29 1.82
1832 3339 1.807142 GAGGGAGTAGCAAGTTTGTGC 59.193 52.381 0.00 0.00 45.28 4.57
1833 3340 2.224523 TGGAGGGAGTAGCAAGTTTGTG 60.225 50.000 0.00 0.00 0.00 3.33
1834 3341 2.054799 TGGAGGGAGTAGCAAGTTTGT 58.945 47.619 0.00 0.00 0.00 2.83
1835 3342 2.859165 TGGAGGGAGTAGCAAGTTTG 57.141 50.000 0.00 0.00 0.00 2.93
1836 3343 3.308473 GGAATGGAGGGAGTAGCAAGTTT 60.308 47.826 0.00 0.00 0.00 2.66
1837 3344 2.239907 GGAATGGAGGGAGTAGCAAGTT 59.760 50.000 0.00 0.00 0.00 2.66
1838 3345 1.840635 GGAATGGAGGGAGTAGCAAGT 59.159 52.381 0.00 0.00 0.00 3.16
1839 3346 1.839994 TGGAATGGAGGGAGTAGCAAG 59.160 52.381 0.00 0.00 0.00 4.01
1840 3347 1.965414 TGGAATGGAGGGAGTAGCAA 58.035 50.000 0.00 0.00 0.00 3.91
1841 3348 1.965414 TTGGAATGGAGGGAGTAGCA 58.035 50.000 0.00 0.00 0.00 3.49
1842 3349 3.366052 TTTTGGAATGGAGGGAGTAGC 57.634 47.619 0.00 0.00 0.00 3.58
1843 3350 5.132816 ACCTATTTTGGAATGGAGGGAGTAG 59.867 44.000 0.00 0.00 28.96 2.57
1844 3351 5.043762 ACCTATTTTGGAATGGAGGGAGTA 58.956 41.667 0.00 0.00 28.96 2.59
1845 3352 3.858638 ACCTATTTTGGAATGGAGGGAGT 59.141 43.478 0.00 0.00 28.96 3.85
1846 3353 4.079787 TCACCTATTTTGGAATGGAGGGAG 60.080 45.833 0.00 0.00 28.96 4.30
1847 3354 3.855599 TCACCTATTTTGGAATGGAGGGA 59.144 43.478 0.00 0.00 28.96 4.20
1848 3355 3.954258 GTCACCTATTTTGGAATGGAGGG 59.046 47.826 0.00 0.00 28.96 4.30
1849 3356 3.954258 GGTCACCTATTTTGGAATGGAGG 59.046 47.826 0.00 0.00 30.45 4.30
1850 3357 3.954258 GGGTCACCTATTTTGGAATGGAG 59.046 47.826 0.00 0.00 0.00 3.86
1851 3358 3.335183 TGGGTCACCTATTTTGGAATGGA 59.665 43.478 0.00 0.00 37.76 3.41
1852 3359 3.707316 TGGGTCACCTATTTTGGAATGG 58.293 45.455 0.00 0.00 37.76 3.16
1853 3360 4.772100 AGTTGGGTCACCTATTTTGGAATG 59.228 41.667 0.00 0.00 37.76 2.67
1854 3361 5.010708 AGTTGGGTCACCTATTTTGGAAT 57.989 39.130 0.00 0.00 37.76 3.01
1855 3362 4.463050 AGTTGGGTCACCTATTTTGGAA 57.537 40.909 0.00 0.00 37.76 3.53
1856 3363 4.463050 AAGTTGGGTCACCTATTTTGGA 57.537 40.909 0.00 0.00 37.76 3.53
1857 3364 4.343814 ACAAAGTTGGGTCACCTATTTTGG 59.656 41.667 16.93 1.37 46.00 3.28
1858 3365 5.529581 ACAAAGTTGGGTCACCTATTTTG 57.470 39.130 13.14 13.14 46.60 2.44
1859 3366 6.370453 AGTACAAAGTTGGGTCACCTATTTT 58.630 36.000 0.00 0.00 37.76 1.82
1860 3367 5.948842 AGTACAAAGTTGGGTCACCTATTT 58.051 37.500 0.00 0.00 37.76 1.40
1861 3368 5.578157 AGTACAAAGTTGGGTCACCTATT 57.422 39.130 0.00 0.00 37.76 1.73
1862 3369 6.271624 ACTTAGTACAAAGTTGGGTCACCTAT 59.728 38.462 0.00 0.00 36.26 2.57
1863 3370 5.603813 ACTTAGTACAAAGTTGGGTCACCTA 59.396 40.000 0.00 0.00 36.26 3.08
1864 3371 4.411212 ACTTAGTACAAAGTTGGGTCACCT 59.589 41.667 0.00 0.00 36.26 4.00
1865 3372 4.711399 ACTTAGTACAAAGTTGGGTCACC 58.289 43.478 0.00 0.00 36.26 4.02
1866 3373 6.988580 ACTAACTTAGTACAAAGTTGGGTCAC 59.011 38.462 14.60 0.00 46.44 3.67
1867 3374 7.128234 ACTAACTTAGTACAAAGTTGGGTCA 57.872 36.000 14.60 0.00 46.44 4.02
1881 3388 9.227777 GATGACCCAAATTTGTACTAACTTAGT 57.772 33.333 16.73 6.68 42.68 2.24
1882 3389 9.449719 AGATGACCCAAATTTGTACTAACTTAG 57.550 33.333 16.73 0.00 0.00 2.18
1884 3391 9.975218 ATAGATGACCCAAATTTGTACTAACTT 57.025 29.630 16.73 0.00 0.00 2.66
1885 3392 9.975218 AATAGATGACCCAAATTTGTACTAACT 57.025 29.630 16.73 11.03 0.00 2.24
1893 3400 9.236691 CGTTTCATAATAGATGACCCAAATTTG 57.763 33.333 11.40 11.40 0.00 2.32
1894 3401 8.413229 CCGTTTCATAATAGATGACCCAAATTT 58.587 33.333 0.00 0.00 0.00 1.82
1895 3402 7.777910 TCCGTTTCATAATAGATGACCCAAATT 59.222 33.333 0.00 0.00 0.00 1.82
1896 3403 7.287061 TCCGTTTCATAATAGATGACCCAAAT 58.713 34.615 0.00 0.00 0.00 2.32
1897 3404 6.654959 TCCGTTTCATAATAGATGACCCAAA 58.345 36.000 0.00 0.00 0.00 3.28
1898 3405 6.241882 TCCGTTTCATAATAGATGACCCAA 57.758 37.500 0.00 0.00 0.00 4.12
1899 3406 5.221641 CCTCCGTTTCATAATAGATGACCCA 60.222 44.000 0.00 0.00 0.00 4.51
1900 3407 5.011738 TCCTCCGTTTCATAATAGATGACCC 59.988 44.000 0.00 0.00 0.00 4.46
1901 3408 6.097915 TCCTCCGTTTCATAATAGATGACC 57.902 41.667 0.00 0.00 0.00 4.02
1902 3409 7.210873 ACTTCCTCCGTTTCATAATAGATGAC 58.789 38.462 0.00 0.00 0.00 3.06
1903 3410 7.361457 ACTTCCTCCGTTTCATAATAGATGA 57.639 36.000 0.00 0.00 0.00 2.92
1904 3411 9.144747 CATACTTCCTCCGTTTCATAATAGATG 57.855 37.037 0.00 0.00 0.00 2.90
1905 3412 8.871125 ACATACTTCCTCCGTTTCATAATAGAT 58.129 33.333 0.00 0.00 0.00 1.98
1906 3413 8.246430 ACATACTTCCTCCGTTTCATAATAGA 57.754 34.615 0.00 0.00 0.00 1.98
1907 3414 7.599245 GGACATACTTCCTCCGTTTCATAATAG 59.401 40.741 0.00 0.00 32.24 1.73
1908 3415 7.289317 AGGACATACTTCCTCCGTTTCATAATA 59.711 37.037 0.00 0.00 42.98 0.98
1909 3416 6.099845 AGGACATACTTCCTCCGTTTCATAAT 59.900 38.462 0.00 0.00 42.98 1.28
1910 3417 5.424252 AGGACATACTTCCTCCGTTTCATAA 59.576 40.000 0.00 0.00 42.98 1.90
1911 3418 4.960469 AGGACATACTTCCTCCGTTTCATA 59.040 41.667 0.00 0.00 42.98 2.15
1912 3419 3.775316 AGGACATACTTCCTCCGTTTCAT 59.225 43.478 0.00 0.00 42.98 2.57
1913 3420 3.170717 AGGACATACTTCCTCCGTTTCA 58.829 45.455 0.00 0.00 42.98 2.69
1914 3421 3.889520 AGGACATACTTCCTCCGTTTC 57.110 47.619 0.00 0.00 42.98 2.78
1915 3422 5.209659 AGATAGGACATACTTCCTCCGTTT 58.790 41.667 0.00 0.00 42.98 3.60
1916 3423 4.805744 AGATAGGACATACTTCCTCCGTT 58.194 43.478 0.00 0.00 42.98 4.44
1917 3424 4.456662 AGATAGGACATACTTCCTCCGT 57.543 45.455 0.00 0.00 42.98 4.69
1918 3425 4.827835 TCAAGATAGGACATACTTCCTCCG 59.172 45.833 0.00 0.00 42.98 4.63
1919 3426 5.836358 ACTCAAGATAGGACATACTTCCTCC 59.164 44.000 0.00 0.00 42.98 4.30
1920 3427 6.293735 CGACTCAAGATAGGACATACTTCCTC 60.294 46.154 0.00 0.00 42.98 3.71
1922 3429 5.278561 CCGACTCAAGATAGGACATACTTCC 60.279 48.000 0.00 0.00 35.66 3.46
1923 3430 5.764131 CCGACTCAAGATAGGACATACTTC 58.236 45.833 0.00 0.00 0.00 3.01
1924 3431 4.038162 GCCGACTCAAGATAGGACATACTT 59.962 45.833 0.00 0.00 0.00 2.24
1925 3432 3.570550 GCCGACTCAAGATAGGACATACT 59.429 47.826 0.00 0.00 0.00 2.12
1926 3433 3.318275 TGCCGACTCAAGATAGGACATAC 59.682 47.826 0.00 0.00 0.00 2.39
1927 3434 3.318275 GTGCCGACTCAAGATAGGACATA 59.682 47.826 0.00 0.00 0.00 2.29
1928 3435 2.101582 GTGCCGACTCAAGATAGGACAT 59.898 50.000 0.00 0.00 0.00 3.06
1929 3436 1.476891 GTGCCGACTCAAGATAGGACA 59.523 52.381 0.00 0.00 0.00 4.02
1930 3437 1.476891 TGTGCCGACTCAAGATAGGAC 59.523 52.381 0.00 0.00 0.00 3.85
1931 3438 1.847328 TGTGCCGACTCAAGATAGGA 58.153 50.000 0.00 0.00 0.00 2.94
1932 3439 2.101415 TGATGTGCCGACTCAAGATAGG 59.899 50.000 0.00 0.00 0.00 2.57
1933 3440 3.443099 TGATGTGCCGACTCAAGATAG 57.557 47.619 0.00 0.00 0.00 2.08
1934 3441 4.262036 GGTATGATGTGCCGACTCAAGATA 60.262 45.833 0.00 0.00 0.00 1.98
1935 3442 2.996249 ATGATGTGCCGACTCAAGAT 57.004 45.000 0.00 0.00 0.00 2.40
1936 3443 2.159099 GGTATGATGTGCCGACTCAAGA 60.159 50.000 0.00 0.00 0.00 3.02
1937 3444 2.159043 AGGTATGATGTGCCGACTCAAG 60.159 50.000 0.00 0.00 37.71 3.02
1938 3445 1.831106 AGGTATGATGTGCCGACTCAA 59.169 47.619 0.00 0.00 37.71 3.02
1939 3446 1.485124 AGGTATGATGTGCCGACTCA 58.515 50.000 0.00 0.00 37.71 3.41
1940 3447 2.604046 AAGGTATGATGTGCCGACTC 57.396 50.000 0.00 0.00 37.71 3.36
1941 3448 2.738643 CGAAAGGTATGATGTGCCGACT 60.739 50.000 0.00 0.00 37.71 4.18
1942 3449 1.593006 CGAAAGGTATGATGTGCCGAC 59.407 52.381 0.00 0.00 37.71 4.79
1943 3450 1.478916 TCGAAAGGTATGATGTGCCGA 59.521 47.619 0.00 0.00 37.71 5.54
1944 3451 1.860950 CTCGAAAGGTATGATGTGCCG 59.139 52.381 0.00 0.00 37.71 5.69
1945 3452 2.906354 ACTCGAAAGGTATGATGTGCC 58.094 47.619 0.00 0.00 0.00 5.01
1946 3453 4.430007 TGTACTCGAAAGGTATGATGTGC 58.570 43.478 0.00 0.00 0.00 4.57
1947 3454 6.359883 CGTATGTACTCGAAAGGTATGATGTG 59.640 42.308 0.00 0.00 0.00 3.21
1948 3455 6.436261 CGTATGTACTCGAAAGGTATGATGT 58.564 40.000 0.00 0.00 0.00 3.06
1949 3456 5.342525 GCGTATGTACTCGAAAGGTATGATG 59.657 44.000 9.12 0.00 0.00 3.07
1950 3457 5.241064 AGCGTATGTACTCGAAAGGTATGAT 59.759 40.000 9.12 0.00 0.00 2.45
1951 3458 4.577693 AGCGTATGTACTCGAAAGGTATGA 59.422 41.667 9.12 0.00 0.00 2.15
1952 3459 4.856664 AGCGTATGTACTCGAAAGGTATG 58.143 43.478 9.12 0.00 0.00 2.39
1953 3460 5.994054 TCTAGCGTATGTACTCGAAAGGTAT 59.006 40.000 9.12 0.00 0.00 2.73
1954 3461 5.359756 TCTAGCGTATGTACTCGAAAGGTA 58.640 41.667 9.12 0.00 0.00 3.08
1955 3462 4.194640 TCTAGCGTATGTACTCGAAAGGT 58.805 43.478 9.12 0.00 0.00 3.50
1956 3463 4.808077 TCTAGCGTATGTACTCGAAAGG 57.192 45.455 9.12 0.00 0.00 3.11
1957 3464 7.133513 AGATTTCTAGCGTATGTACTCGAAAG 58.866 38.462 9.12 5.94 0.00 2.62
1958 3465 7.024340 AGATTTCTAGCGTATGTACTCGAAA 57.976 36.000 9.12 0.00 0.00 3.46
1959 3466 6.615264 AGATTTCTAGCGTATGTACTCGAA 57.385 37.500 9.12 0.00 0.00 3.71
1960 3467 7.902387 ATAGATTTCTAGCGTATGTACTCGA 57.098 36.000 9.12 0.00 0.00 4.04
1963 3470 9.823098 CGTTTATAGATTTCTAGCGTATGTACT 57.177 33.333 0.00 0.00 0.00 2.73
1964 3471 9.059485 CCGTTTATAGATTTCTAGCGTATGTAC 57.941 37.037 0.00 0.00 0.00 2.90
1972 3479 9.151471 TGCAATATCCGTTTATAGATTTCTAGC 57.849 33.333 0.00 0.00 0.00 3.42
1976 3483 6.736853 GCGTGCAATATCCGTTTATAGATTTC 59.263 38.462 0.00 0.00 0.00 2.17
1977 3484 6.599437 GCGTGCAATATCCGTTTATAGATTT 58.401 36.000 0.00 0.00 0.00 2.17
1980 3487 3.671459 CGCGTGCAATATCCGTTTATAGA 59.329 43.478 0.00 0.00 0.00 1.98
1981 3488 3.720920 GCGCGTGCAATATCCGTTTATAG 60.721 47.826 17.66 0.00 42.15 1.31
1982 3489 2.156117 GCGCGTGCAATATCCGTTTATA 59.844 45.455 17.66 0.00 42.15 0.98
1983 3490 1.070175 GCGCGTGCAATATCCGTTTAT 60.070 47.619 17.66 0.00 42.15 1.40
1984 3491 0.302288 GCGCGTGCAATATCCGTTTA 59.698 50.000 17.66 0.00 42.15 2.01
1985 3492 1.061887 GCGCGTGCAATATCCGTTT 59.938 52.632 17.66 0.00 42.15 3.60
2002 3509 2.526304 TTACTCGGCTGGATGTATGC 57.474 50.000 0.00 0.00 0.00 3.14
2005 3512 6.474140 TTCTAATTTACTCGGCTGGATGTA 57.526 37.500 0.00 0.00 0.00 2.29
2006 3513 5.353394 TTCTAATTTACTCGGCTGGATGT 57.647 39.130 0.00 0.00 0.00 3.06
2007 3514 6.677781 TTTTCTAATTTACTCGGCTGGATG 57.322 37.500 0.00 0.00 0.00 3.51
2028 3535 5.639931 ACTTTTGCACAATTACGGTGTTTTT 59.360 32.000 0.00 0.00 38.51 1.94
2029 3536 5.172205 ACTTTTGCACAATTACGGTGTTTT 58.828 33.333 0.00 0.00 38.51 2.43
2030 3537 4.749976 ACTTTTGCACAATTACGGTGTTT 58.250 34.783 0.00 0.00 38.51 2.83
2031 3538 4.142359 TGACTTTTGCACAATTACGGTGTT 60.142 37.500 0.00 0.00 38.51 3.32
2032 3539 3.378742 TGACTTTTGCACAATTACGGTGT 59.621 39.130 0.00 0.00 38.51 4.16
2033 3540 3.958704 TGACTTTTGCACAATTACGGTG 58.041 40.909 0.00 0.00 39.25 4.94
2034 3541 4.277174 TGATGACTTTTGCACAATTACGGT 59.723 37.500 0.00 0.00 0.00 4.83
2035 3542 4.793071 TGATGACTTTTGCACAATTACGG 58.207 39.130 0.00 0.00 0.00 4.02
2036 3543 6.198029 TGTTTGATGACTTTTGCACAATTACG 59.802 34.615 0.00 0.00 0.00 3.18
2037 3544 7.462109 TGTTTGATGACTTTTGCACAATTAC 57.538 32.000 0.00 0.00 0.00 1.89
2038 3545 7.924947 TGATGTTTGATGACTTTTGCACAATTA 59.075 29.630 0.00 0.00 0.00 1.40
2039 3546 6.762187 TGATGTTTGATGACTTTTGCACAATT 59.238 30.769 0.00 0.00 0.00 2.32
2045 3552 6.586868 TGTTTGATGTTTGATGACTTTTGC 57.413 33.333 0.00 0.00 0.00 3.68
2052 3559 4.759183 TGTCGGATGTTTGATGTTTGATGA 59.241 37.500 0.00 0.00 0.00 2.92
2053 3560 5.045668 TGTCGGATGTTTGATGTTTGATG 57.954 39.130 0.00 0.00 0.00 3.07
2054 3561 5.703978 TTGTCGGATGTTTGATGTTTGAT 57.296 34.783 0.00 0.00 0.00 2.57
2055 3562 5.506686 TTTGTCGGATGTTTGATGTTTGA 57.493 34.783 0.00 0.00 0.00 2.69
2056 3563 6.583160 CATTTTGTCGGATGTTTGATGTTTG 58.417 36.000 0.00 0.00 0.00 2.93
2058 3565 4.685628 GCATTTTGTCGGATGTTTGATGTT 59.314 37.500 0.00 0.00 0.00 2.71
2060 3567 4.236147 TGCATTTTGTCGGATGTTTGATG 58.764 39.130 0.00 0.00 0.00 3.07
2061 3568 4.517952 TGCATTTTGTCGGATGTTTGAT 57.482 36.364 0.00 0.00 0.00 2.57
2062 3569 3.998099 TGCATTTTGTCGGATGTTTGA 57.002 38.095 0.00 0.00 0.00 2.69
2063 3570 3.989167 ACATGCATTTTGTCGGATGTTTG 59.011 39.130 0.00 0.00 40.77 2.93
2064 3571 4.255833 ACATGCATTTTGTCGGATGTTT 57.744 36.364 0.00 0.00 40.77 2.83
2065 3572 3.940209 ACATGCATTTTGTCGGATGTT 57.060 38.095 0.00 0.00 40.77 2.71
2066 3573 3.940209 AACATGCATTTTGTCGGATGT 57.060 38.095 0.00 0.00 44.83 3.06
2067 3574 4.925054 AGAAAACATGCATTTTGTCGGATG 59.075 37.500 9.58 0.00 37.04 3.51
2068 3575 4.925054 CAGAAAACATGCATTTTGTCGGAT 59.075 37.500 9.54 0.00 31.90 4.18
2069 3576 4.037327 TCAGAAAACATGCATTTTGTCGGA 59.963 37.500 12.77 12.77 31.90 4.55
2070 3577 4.297510 TCAGAAAACATGCATTTTGTCGG 58.702 39.130 9.58 9.28 31.90 4.79
2072 3579 5.697633 ACCATCAGAAAACATGCATTTTGTC 59.302 36.000 7.56 7.56 31.90 3.18
2073 3580 5.613329 ACCATCAGAAAACATGCATTTTGT 58.387 33.333 0.00 0.00 31.90 2.83
2074 3581 6.548441 AACCATCAGAAAACATGCATTTTG 57.452 33.333 0.00 0.00 31.90 2.44
2075 3582 7.571080 AAAACCATCAGAAAACATGCATTTT 57.429 28.000 0.00 0.00 34.46 1.82
2076 3583 7.499895 AGAAAAACCATCAGAAAACATGCATTT 59.500 29.630 0.00 0.00 0.00 2.32
2077 3584 6.993902 AGAAAAACCATCAGAAAACATGCATT 59.006 30.769 0.00 0.00 0.00 3.56
2078 3585 6.527423 AGAAAAACCATCAGAAAACATGCAT 58.473 32.000 0.00 0.00 0.00 3.96
2079 3586 5.916318 AGAAAAACCATCAGAAAACATGCA 58.084 33.333 0.00 0.00 0.00 3.96
2080 3587 6.479660 TCAAGAAAAACCATCAGAAAACATGC 59.520 34.615 0.00 0.00 0.00 4.06
2081 3588 8.422973 TTCAAGAAAAACCATCAGAAAACATG 57.577 30.769 0.00 0.00 0.00 3.21
2082 3589 7.225341 GCTTCAAGAAAAACCATCAGAAAACAT 59.775 33.333 0.00 0.00 0.00 2.71
2083 3590 6.534793 GCTTCAAGAAAAACCATCAGAAAACA 59.465 34.615 0.00 0.00 0.00 2.83
2084 3591 6.758416 AGCTTCAAGAAAAACCATCAGAAAAC 59.242 34.615 0.00 0.00 0.00 2.43
2085 3592 6.757947 CAGCTTCAAGAAAAACCATCAGAAAA 59.242 34.615 0.00 0.00 0.00 2.29
2087 3594 5.737063 GCAGCTTCAAGAAAAACCATCAGAA 60.737 40.000 0.00 0.00 0.00 3.02
2089 3596 3.985925 GCAGCTTCAAGAAAAACCATCAG 59.014 43.478 0.00 0.00 0.00 2.90
2090 3597 3.243839 GGCAGCTTCAAGAAAAACCATCA 60.244 43.478 0.00 0.00 0.00 3.07
2091 3598 3.320626 GGCAGCTTCAAGAAAAACCATC 58.679 45.455 0.00 0.00 0.00 3.51
2093 3600 1.412343 GGGCAGCTTCAAGAAAAACCA 59.588 47.619 0.00 0.00 0.00 3.67
2095 3602 2.888834 TGGGCAGCTTCAAGAAAAAC 57.111 45.000 0.00 0.00 0.00 2.43
2096 3603 4.128643 CAATTGGGCAGCTTCAAGAAAAA 58.871 39.130 0.00 0.00 0.00 1.94
2097 3604 3.134442 ACAATTGGGCAGCTTCAAGAAAA 59.866 39.130 10.83 0.00 0.00 2.29
2098 3605 2.699846 ACAATTGGGCAGCTTCAAGAAA 59.300 40.909 10.83 0.00 0.00 2.52
2099 3606 2.036217 CACAATTGGGCAGCTTCAAGAA 59.964 45.455 10.83 0.00 0.00 2.52
2100 3607 1.614903 CACAATTGGGCAGCTTCAAGA 59.385 47.619 10.83 0.00 0.00 3.02
2101 3608 1.614903 TCACAATTGGGCAGCTTCAAG 59.385 47.619 10.83 0.00 0.00 3.02
2102 3609 1.702182 TCACAATTGGGCAGCTTCAA 58.298 45.000 10.83 0.00 0.00 2.69
2103 3610 1.546923 CATCACAATTGGGCAGCTTCA 59.453 47.619 10.83 0.00 0.00 3.02
2104 3611 1.134907 CCATCACAATTGGGCAGCTTC 60.135 52.381 10.83 0.00 0.00 3.86
2105 3612 0.899720 CCATCACAATTGGGCAGCTT 59.100 50.000 10.83 0.00 0.00 3.74
2106 3613 2.587080 CCATCACAATTGGGCAGCT 58.413 52.632 10.83 0.00 0.00 4.24
2112 3619 5.212532 TGAAAAGAACCCATCACAATTGG 57.787 39.130 10.83 0.00 0.00 3.16
2113 3620 7.733402 AATTGAAAAGAACCCATCACAATTG 57.267 32.000 3.24 3.24 36.06 2.32
2115 3622 8.650490 AGTAAATTGAAAAGAACCCATCACAAT 58.350 29.630 0.00 0.00 0.00 2.71
2116 3623 8.017418 AGTAAATTGAAAAGAACCCATCACAA 57.983 30.769 0.00 0.00 0.00 3.33
2119 3626 6.780031 TGGAGTAAATTGAAAAGAACCCATCA 59.220 34.615 0.00 0.00 0.00 3.07
2122 3629 6.210584 GGATGGAGTAAATTGAAAAGAACCCA 59.789 38.462 0.00 0.00 0.00 4.51
2123 3630 6.210584 TGGATGGAGTAAATTGAAAAGAACCC 59.789 38.462 0.00 0.00 0.00 4.11
2125 3632 7.315890 CCTGGATGGAGTAAATTGAAAAGAAC 58.684 38.462 0.00 0.00 38.35 3.01
2126 3633 6.071391 GCCTGGATGGAGTAAATTGAAAAGAA 60.071 38.462 0.00 0.00 38.35 2.52
2127 3634 5.418840 GCCTGGATGGAGTAAATTGAAAAGA 59.581 40.000 0.00 0.00 38.35 2.52
2128 3635 5.185635 TGCCTGGATGGAGTAAATTGAAAAG 59.814 40.000 0.00 0.00 38.35 2.27
2129 3636 5.083122 TGCCTGGATGGAGTAAATTGAAAA 58.917 37.500 0.00 0.00 38.35 2.29
2130 3637 4.671831 TGCCTGGATGGAGTAAATTGAAA 58.328 39.130 0.00 0.00 38.35 2.69
2131 3638 4.018506 TCTGCCTGGATGGAGTAAATTGAA 60.019 41.667 0.00 0.00 38.35 2.69
2132 3639 3.523157 TCTGCCTGGATGGAGTAAATTGA 59.477 43.478 0.00 0.00 38.35 2.57
2133 3640 3.889815 TCTGCCTGGATGGAGTAAATTG 58.110 45.455 0.00 0.00 38.35 2.32
2134 3641 4.803329 ATCTGCCTGGATGGAGTAAATT 57.197 40.909 0.00 0.00 38.35 1.82
2135 3642 5.370880 AGTTATCTGCCTGGATGGAGTAAAT 59.629 40.000 0.00 0.00 38.35 1.40
2136 3643 4.721776 AGTTATCTGCCTGGATGGAGTAAA 59.278 41.667 0.00 0.00 38.35 2.01
2137 3644 4.298626 AGTTATCTGCCTGGATGGAGTAA 58.701 43.478 0.00 0.00 38.35 2.24
2138 3645 3.898123 GAGTTATCTGCCTGGATGGAGTA 59.102 47.826 0.00 0.00 38.35 2.59
2139 3646 2.703007 GAGTTATCTGCCTGGATGGAGT 59.297 50.000 0.00 0.00 38.35 3.85
2140 3647 2.702478 TGAGTTATCTGCCTGGATGGAG 59.298 50.000 0.00 0.00 38.35 3.86
2141 3648 2.763039 TGAGTTATCTGCCTGGATGGA 58.237 47.619 0.00 0.00 38.35 3.41
2142 3649 3.565764 TTGAGTTATCTGCCTGGATGG 57.434 47.619 0.00 0.00 39.35 3.51
2143 3650 4.264253 TGTTTGAGTTATCTGCCTGGATG 58.736 43.478 0.00 0.00 0.00 3.51
2144 3651 4.018960 ACTGTTTGAGTTATCTGCCTGGAT 60.019 41.667 0.00 0.00 0.00 3.41
2145 3652 3.327757 ACTGTTTGAGTTATCTGCCTGGA 59.672 43.478 0.00 0.00 0.00 3.86
2146 3653 3.679389 ACTGTTTGAGTTATCTGCCTGG 58.321 45.455 0.00 0.00 0.00 4.45
2157 3664 3.864921 GCGGTCTGGATAACTGTTTGAGT 60.865 47.826 0.00 0.00 35.94 3.41
2158 3665 2.673368 GCGGTCTGGATAACTGTTTGAG 59.327 50.000 0.00 0.00 0.00 3.02
2159 3666 2.037902 TGCGGTCTGGATAACTGTTTGA 59.962 45.455 0.00 0.00 0.00 2.69
2160 3667 2.422597 TGCGGTCTGGATAACTGTTTG 58.577 47.619 0.00 0.00 0.00 2.93
2161 3668 2.851263 TGCGGTCTGGATAACTGTTT 57.149 45.000 0.00 0.00 0.00 2.83
2162 3669 2.851263 TTGCGGTCTGGATAACTGTT 57.149 45.000 0.00 0.00 0.00 3.16
2163 3670 2.851263 TTTGCGGTCTGGATAACTGT 57.149 45.000 0.00 0.00 0.00 3.55
2164 3671 3.334691 TCTTTTGCGGTCTGGATAACTG 58.665 45.455 0.00 0.00 0.00 3.16
2165 3672 3.695830 TCTTTTGCGGTCTGGATAACT 57.304 42.857 0.00 0.00 0.00 2.24
2166 3673 4.454504 TCTTTCTTTTGCGGTCTGGATAAC 59.545 41.667 0.00 0.00 0.00 1.89
2167 3674 4.647611 TCTTTCTTTTGCGGTCTGGATAA 58.352 39.130 0.00 0.00 0.00 1.75
2168 3675 4.280436 TCTTTCTTTTGCGGTCTGGATA 57.720 40.909 0.00 0.00 0.00 2.59
2169 3676 3.140325 TCTTTCTTTTGCGGTCTGGAT 57.860 42.857 0.00 0.00 0.00 3.41
2170 3677 2.631160 TCTTTCTTTTGCGGTCTGGA 57.369 45.000 0.00 0.00 0.00 3.86
2171 3678 3.708563 TTTCTTTCTTTTGCGGTCTGG 57.291 42.857 0.00 0.00 0.00 3.86
2172 3679 4.504097 CCTTTTTCTTTCTTTTGCGGTCTG 59.496 41.667 0.00 0.00 0.00 3.51
2173 3680 4.441495 CCCTTTTTCTTTCTTTTGCGGTCT 60.441 41.667 0.00 0.00 0.00 3.85
2174 3681 3.802139 CCCTTTTTCTTTCTTTTGCGGTC 59.198 43.478 0.00 0.00 0.00 4.79
2175 3682 3.196901 ACCCTTTTTCTTTCTTTTGCGGT 59.803 39.130 0.00 0.00 0.00 5.68
2176 3683 3.792401 ACCCTTTTTCTTTCTTTTGCGG 58.208 40.909 0.00 0.00 0.00 5.69
2177 3684 5.233476 GGTAACCCTTTTTCTTTCTTTTGCG 59.767 40.000 0.00 0.00 0.00 4.85
2178 3685 6.598753 GGTAACCCTTTTTCTTTCTTTTGC 57.401 37.500 0.00 0.00 0.00 3.68
2208 3715 3.053320 ACAAAATGGAGGAGGAAGGGATC 60.053 47.826 0.00 0.00 0.00 3.36
2210 3717 2.308866 GACAAAATGGAGGAGGAAGGGA 59.691 50.000 0.00 0.00 0.00 4.20
2215 3722 5.488919 ACATAAGAGACAAAATGGAGGAGGA 59.511 40.000 0.00 0.00 0.00 3.71
2216 3723 5.749462 ACATAAGAGACAAAATGGAGGAGG 58.251 41.667 0.00 0.00 0.00 4.30
2217 3724 6.538021 CAGACATAAGAGACAAAATGGAGGAG 59.462 42.308 0.00 0.00 0.00 3.69
2218 3725 6.409704 CAGACATAAGAGACAAAATGGAGGA 58.590 40.000 0.00 0.00 0.00 3.71
2219 3726 5.587844 CCAGACATAAGAGACAAAATGGAGG 59.412 44.000 0.00 0.00 0.00 4.30
2220 3727 5.587844 CCCAGACATAAGAGACAAAATGGAG 59.412 44.000 0.00 0.00 0.00 3.86
2221 3728 5.250543 TCCCAGACATAAGAGACAAAATGGA 59.749 40.000 0.00 0.00 0.00 3.41
2222 3729 5.500234 TCCCAGACATAAGAGACAAAATGG 58.500 41.667 0.00 0.00 0.00 3.16
2235 3742 4.529377 GGGTTTACGGATATCCCAGACATA 59.471 45.833 16.36 0.00 38.15 2.29
2243 3751 5.032327 AGTTTGAGGGTTTACGGATATCC 57.968 43.478 12.14 12.14 0.00 2.59
2245 3753 5.671493 CTGAGTTTGAGGGTTTACGGATAT 58.329 41.667 0.00 0.00 0.00 1.63
2250 3758 1.804748 GGCTGAGTTTGAGGGTTTACG 59.195 52.381 0.00 0.00 0.00 3.18
2276 3784 1.179814 ACGTCCTCATATCCTCCCGC 61.180 60.000 0.00 0.00 0.00 6.13
2277 3785 0.882474 GACGTCCTCATATCCTCCCG 59.118 60.000 3.51 0.00 0.00 5.14
2288 3797 3.860536 GCTAGACATTTTCAGACGTCCTC 59.139 47.826 13.01 0.00 0.00 3.71
2292 3801 4.238514 GACTGCTAGACATTTTCAGACGT 58.761 43.478 0.00 0.00 0.00 4.34
2294 3803 4.390297 GTGGACTGCTAGACATTTTCAGAC 59.610 45.833 0.00 0.00 0.00 3.51
2297 3806 3.072330 TGGTGGACTGCTAGACATTTTCA 59.928 43.478 0.00 0.00 0.00 2.69
2299 3808 3.412386 GTGGTGGACTGCTAGACATTTT 58.588 45.455 0.00 0.00 0.00 1.82
2305 3814 1.583495 CGACGTGGTGGACTGCTAGA 61.583 60.000 0.00 0.00 0.00 2.43
2307 3816 2.632544 CCGACGTGGTGGACTGCTA 61.633 63.158 0.00 0.00 0.00 3.49
2331 3841 1.843851 AGATAAAGTGGGCCGAATGGA 59.156 47.619 0.00 0.00 37.49 3.41
2334 3844 3.864789 ATGAGATAAAGTGGGCCGAAT 57.135 42.857 0.00 0.00 0.00 3.34
2335 3845 3.644966 AATGAGATAAAGTGGGCCGAA 57.355 42.857 0.00 0.00 0.00 4.30
2336 3846 3.644966 AAATGAGATAAAGTGGGCCGA 57.355 42.857 0.00 0.00 0.00 5.54
2370 3881 6.269538 TGTGATTGATGGGGATGAAAAGAAAA 59.730 34.615 0.00 0.00 0.00 2.29
2376 3887 5.764432 TGTATGTGATTGATGGGGATGAAA 58.236 37.500 0.00 0.00 0.00 2.69
2385 3902 5.296531 TCCGGTCAAATGTATGTGATTGATG 59.703 40.000 0.00 0.00 34.62 3.07
2397 3914 4.644685 CCCTCAAATTATCCGGTCAAATGT 59.355 41.667 0.00 0.00 0.00 2.71
2403 3920 7.184067 ACTATATCCCTCAAATTATCCGGTC 57.816 40.000 0.00 0.00 0.00 4.79
2405 3922 6.316390 GCAACTATATCCCTCAAATTATCCGG 59.684 42.308 0.00 0.00 0.00 5.14
2406 3923 6.036083 CGCAACTATATCCCTCAAATTATCCG 59.964 42.308 0.00 0.00 0.00 4.18
2408 3925 7.624344 GCACGCAACTATATCCCTCAAATTATC 60.624 40.741 0.00 0.00 0.00 1.75
2409 3926 6.149474 GCACGCAACTATATCCCTCAAATTAT 59.851 38.462 0.00 0.00 0.00 1.28
2410 3927 5.468746 GCACGCAACTATATCCCTCAAATTA 59.531 40.000 0.00 0.00 0.00 1.40
2411 3928 4.275936 GCACGCAACTATATCCCTCAAATT 59.724 41.667 0.00 0.00 0.00 1.82
2413 3930 3.202906 GCACGCAACTATATCCCTCAAA 58.797 45.455 0.00 0.00 0.00 2.69
2415 3932 1.760029 TGCACGCAACTATATCCCTCA 59.240 47.619 0.00 0.00 0.00 3.86
2416 3933 2.526304 TGCACGCAACTATATCCCTC 57.474 50.000 0.00 0.00 0.00 4.30
2417 3934 2.368548 TCATGCACGCAACTATATCCCT 59.631 45.455 0.00 0.00 0.00 4.20
2418 3935 2.766313 TCATGCACGCAACTATATCCC 58.234 47.619 0.00 0.00 0.00 3.85
2419 3936 3.362986 CGTTCATGCACGCAACTATATCC 60.363 47.826 4.67 0.00 32.43 2.59
2420 3937 3.489416 TCGTTCATGCACGCAACTATATC 59.511 43.478 13.25 0.00 40.14 1.63
2421 3938 3.453424 TCGTTCATGCACGCAACTATAT 58.547 40.909 13.25 0.00 40.14 0.86
2422 3939 2.882324 TCGTTCATGCACGCAACTATA 58.118 42.857 13.25 0.00 40.14 1.31
2423 3940 1.720805 TCGTTCATGCACGCAACTAT 58.279 45.000 13.25 0.00 40.14 2.12
2424 3941 1.393196 CATCGTTCATGCACGCAACTA 59.607 47.619 13.25 0.00 40.14 2.24
2426 3943 0.165727 TCATCGTTCATGCACGCAAC 59.834 50.000 13.25 0.00 40.14 4.17
2430 3947 0.740868 ACCCTCATCGTTCATGCACG 60.741 55.000 11.85 11.85 41.78 5.34
2434 3951 3.193263 CTCTGAACCCTCATCGTTCATG 58.807 50.000 4.03 0.00 46.26 3.07
2440 3957 1.134965 GTCCACTCTGAACCCTCATCG 60.135 57.143 0.00 0.00 0.00 3.84
2441 3958 1.902508 TGTCCACTCTGAACCCTCATC 59.097 52.381 0.00 0.00 0.00 2.92
2442 3959 1.625818 GTGTCCACTCTGAACCCTCAT 59.374 52.381 0.00 0.00 0.00 2.90
2453 3970 4.736896 GTCCGGGCGTGTCCACTC 62.737 72.222 0.00 0.00 36.21 3.51
2456 3973 3.632080 AATGTCCGGGCGTGTCCA 61.632 61.111 0.00 0.00 36.21 4.02
2457 3974 3.124921 CAATGTCCGGGCGTGTCC 61.125 66.667 0.00 0.00 0.00 4.02
2458 3975 2.358247 ACAATGTCCGGGCGTGTC 60.358 61.111 0.00 0.00 0.00 3.67
2462 3979 0.527817 GTCTAGACAATGTCCGGGCG 60.528 60.000 18.20 0.00 32.18 6.13
2463 3980 0.535335 TGTCTAGACAATGTCCGGGC 59.465 55.000 23.24 0.00 38.56 6.13
2465 3982 6.333416 CCATATATGTCTAGACAATGTCCGG 58.667 44.000 28.43 19.46 45.41 5.14
2466 3983 6.333416 CCCATATATGTCTAGACAATGTCCG 58.667 44.000 28.43 15.11 45.41 4.79
2467 3984 6.644347 CCCCATATATGTCTAGACAATGTCC 58.356 44.000 28.43 0.00 45.41 4.02
2468 3985 6.109359 GCCCCATATATGTCTAGACAATGTC 58.891 44.000 28.43 14.20 45.41 3.06
2471 3988 6.702449 TTGCCCCATATATGTCTAGACAAT 57.298 37.500 28.43 22.31 45.41 2.71
2473 3990 5.606749 AGTTTGCCCCATATATGTCTAGACA 59.393 40.000 27.07 27.07 46.44 3.41
2474 3991 6.115448 AGTTTGCCCCATATATGTCTAGAC 57.885 41.667 16.32 16.32 0.00 2.59
2475 3992 6.070767 GCTAGTTTGCCCCATATATGTCTAGA 60.071 42.308 11.73 0.00 0.00 2.43
2476 3993 6.070538 AGCTAGTTTGCCCCATATATGTCTAG 60.071 42.308 11.73 10.93 0.00 2.43
2477 3994 5.785423 AGCTAGTTTGCCCCATATATGTCTA 59.215 40.000 11.73 2.86 0.00 2.59
2478 3995 4.599241 AGCTAGTTTGCCCCATATATGTCT 59.401 41.667 11.73 1.98 0.00 3.41
2479 3996 4.911390 AGCTAGTTTGCCCCATATATGTC 58.089 43.478 11.73 1.67 0.00 3.06
2480 3997 4.350816 TGAGCTAGTTTGCCCCATATATGT 59.649 41.667 11.73 0.00 0.00 2.29
2481 3998 4.910195 TGAGCTAGTTTGCCCCATATATG 58.090 43.478 5.68 5.68 0.00 1.78
2482 3999 5.582950 TTGAGCTAGTTTGCCCCATATAT 57.417 39.130 0.00 0.00 0.00 0.86
2483 4000 5.514834 GGATTGAGCTAGTTTGCCCCATATA 60.515 44.000 0.00 0.00 0.00 0.86
2484 4001 3.951563 TTGAGCTAGTTTGCCCCATAT 57.048 42.857 0.00 0.00 0.00 1.78
2485 4002 3.435026 GGATTGAGCTAGTTTGCCCCATA 60.435 47.826 0.00 0.00 0.00 2.74
2486 4003 2.659428 GATTGAGCTAGTTTGCCCCAT 58.341 47.619 0.00 0.00 0.00 4.00
2487 4004 1.340991 GGATTGAGCTAGTTTGCCCCA 60.341 52.381 0.00 0.00 0.00 4.96
2491 4008 2.622436 AGACGGATTGAGCTAGTTTGC 58.378 47.619 0.00 0.00 0.00 3.68
2496 4013 4.683781 GCATCTAAAGACGGATTGAGCTAG 59.316 45.833 0.00 0.00 0.00 3.42
2525 4042 6.482973 CCTCTTTCATTCTTGCTCTTATCCTC 59.517 42.308 0.00 0.00 0.00 3.71
2526 4043 6.069731 ACCTCTTTCATTCTTGCTCTTATCCT 60.070 38.462 0.00 0.00 0.00 3.24
2527 4044 6.118852 ACCTCTTTCATTCTTGCTCTTATCC 58.881 40.000 0.00 0.00 0.00 2.59
2528 4045 8.723942 TTACCTCTTTCATTCTTGCTCTTATC 57.276 34.615 0.00 0.00 0.00 1.75
2529 4046 9.336171 GATTACCTCTTTCATTCTTGCTCTTAT 57.664 33.333 0.00 0.00 0.00 1.73
2530 4047 8.321353 TGATTACCTCTTTCATTCTTGCTCTTA 58.679 33.333 0.00 0.00 0.00 2.10
2531 4048 7.120432 GTGATTACCTCTTTCATTCTTGCTCTT 59.880 37.037 0.00 0.00 0.00 2.85
2537 4054 8.160106 AGAGTTGTGATTACCTCTTTCATTCTT 58.840 33.333 0.00 0.00 30.23 2.52
2544 4061 9.654663 GTATAACAGAGTTGTGATTACCTCTTT 57.345 33.333 0.00 0.00 37.67 2.52
2604 4121 9.810545 TCTTCACACCAAAACCTTTTAAAATAG 57.189 29.630 0.09 0.00 0.00 1.73
2605 4122 9.810545 CTCTTCACACCAAAACCTTTTAAAATA 57.189 29.630 0.09 0.00 0.00 1.40
2606 4123 7.279981 GCTCTTCACACCAAAACCTTTTAAAAT 59.720 33.333 0.09 0.00 0.00 1.82
2667 4188 9.723447 CGCTCGTCATCTTCTATATACATAAAT 57.277 33.333 0.00 0.00 0.00 1.40
2673 4194 6.739100 CACTTCGCTCGTCATCTTCTATATAC 59.261 42.308 0.00 0.00 0.00 1.47
2692 4214 0.947244 AGTCCAAGCAAAGCACTTCG 59.053 50.000 0.00 0.00 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.