Multiple sequence alignment - TraesCS5B01G493300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G493300 | chr5B | 100.000 | 3827 | 0 | 0 | 1 | 3827 | 661359585 | 661355759 | 0.000000e+00 | 7068.0 |
1 | TraesCS5B01G493300 | chr5B | 100.000 | 36 | 0 | 0 | 310 | 345 | 661359242 | 661359207 | 2.470000e-07 | 67.6 |
2 | TraesCS5B01G493300 | chr5B | 100.000 | 36 | 0 | 0 | 344 | 379 | 661359276 | 661359241 | 2.470000e-07 | 67.6 |
3 | TraesCS5B01G493300 | chr5D | 91.919 | 2945 | 187 | 18 | 907 | 3811 | 526292393 | 526289460 | 0.000000e+00 | 4072.0 |
4 | TraesCS5B01G493300 | chr5D | 93.966 | 348 | 16 | 3 | 1 | 345 | 526293007 | 526292662 | 4.380000e-144 | 521.0 |
5 | TraesCS5B01G493300 | chr5D | 87.730 | 326 | 28 | 7 | 349 | 672 | 526292692 | 526292377 | 1.680000e-98 | 370.0 |
6 | TraesCS5B01G493300 | chr5D | 92.157 | 51 | 4 | 0 | 666 | 716 | 386677580 | 386677630 | 5.300000e-09 | 73.1 |
7 | TraesCS5B01G493300 | chr5A | 92.052 | 2466 | 154 | 17 | 907 | 3340 | 653407535 | 653405080 | 0.000000e+00 | 3430.0 |
8 | TraesCS5B01G493300 | chr5A | 93.651 | 756 | 24 | 1 | 3056 | 3811 | 653405083 | 653404352 | 0.000000e+00 | 1109.0 |
9 | TraesCS5B01G493300 | chr5A | 93.678 | 348 | 17 | 3 | 1 | 345 | 653408151 | 653407806 | 2.040000e-142 | 516.0 |
10 | TraesCS5B01G493300 | chr5A | 88.415 | 328 | 24 | 8 | 349 | 672 | 653407836 | 653407519 | 2.160000e-102 | 383.0 |
11 | TraesCS5B01G493300 | chr5A | 93.671 | 79 | 5 | 0 | 2300 | 2378 | 626021899 | 626021821 | 6.720000e-23 | 119.0 |
12 | TraesCS5B01G493300 | chr2A | 83.642 | 703 | 80 | 18 | 2562 | 3243 | 706228685 | 706227997 | 2.510000e-176 | 628.0 |
13 | TraesCS5B01G493300 | chr2A | 95.745 | 47 | 2 | 0 | 670 | 716 | 766649579 | 766649533 | 4.100000e-10 | 76.8 |
14 | TraesCS5B01G493300 | chr7A | 94.937 | 79 | 4 | 0 | 2300 | 2378 | 419270328 | 419270250 | 1.440000e-24 | 124.0 |
15 | TraesCS5B01G493300 | chr7B | 92.308 | 52 | 4 | 0 | 665 | 716 | 634865119 | 634865068 | 1.470000e-09 | 75.0 |
16 | TraesCS5B01G493300 | chr7B | 93.478 | 46 | 3 | 0 | 671 | 716 | 4202854 | 4202809 | 6.860000e-08 | 69.4 |
17 | TraesCS5B01G493300 | chr7B | 93.478 | 46 | 3 | 0 | 671 | 716 | 594532504 | 594532459 | 6.860000e-08 | 69.4 |
18 | TraesCS5B01G493300 | chr7B | 93.478 | 46 | 3 | 0 | 671 | 716 | 608863577 | 608863622 | 6.860000e-08 | 69.4 |
19 | TraesCS5B01G493300 | chr4B | 95.556 | 45 | 2 | 0 | 672 | 716 | 645075468 | 645075424 | 5.300000e-09 | 73.1 |
20 | TraesCS5B01G493300 | chr3D | 90.566 | 53 | 4 | 1 | 665 | 716 | 481554425 | 481554477 | 6.860000e-08 | 69.4 |
21 | TraesCS5B01G493300 | chr3A | 93.478 | 46 | 3 | 0 | 671 | 716 | 692985906 | 692985861 | 6.860000e-08 | 69.4 |
22 | TraesCS5B01G493300 | chr2B | 100.000 | 28 | 0 | 0 | 772 | 799 | 690731977 | 690731950 | 7.000000e-03 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G493300 | chr5B | 661355759 | 661359585 | 3826 | True | 2401.066667 | 7068 | 100.000 | 1 | 3827 | 3 | chr5B.!!$R1 | 3826 |
1 | TraesCS5B01G493300 | chr5D | 526289460 | 526293007 | 3547 | True | 1654.333333 | 4072 | 91.205 | 1 | 3811 | 3 | chr5D.!!$R1 | 3810 |
2 | TraesCS5B01G493300 | chr5A | 653404352 | 653408151 | 3799 | True | 1359.500000 | 3430 | 91.949 | 1 | 3811 | 4 | chr5A.!!$R2 | 3810 |
3 | TraesCS5B01G493300 | chr2A | 706227997 | 706228685 | 688 | True | 628.000000 | 628 | 83.642 | 2562 | 3243 | 1 | chr2A.!!$R1 | 681 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
347 | 350 | 0.032130 | TTGATCATAGCGAGGTCGGC | 59.968 | 55.0 | 0.00 | 0.0 | 40.23 | 5.54 | F |
799 | 806 | 0.036952 | AGGCACCTGTGATGACTTCG | 60.037 | 55.0 | 0.51 | 0.0 | 27.74 | 3.79 | F |
800 | 807 | 0.320771 | GGCACCTGTGATGACTTCGT | 60.321 | 55.0 | 0.51 | 0.0 | 0.00 | 3.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2269 | 2288 | 0.694771 | TCCCTGCTGATGCTTTCACT | 59.305 | 50.000 | 0.00 | 0.00 | 40.48 | 3.41 | R |
2769 | 2799 | 0.108615 | AGCGATGGAAACGACTCCTG | 60.109 | 55.000 | 8.63 | 1.59 | 36.35 | 3.86 | R |
2883 | 2917 | 2.390938 | CTGCATGTGCTGTTGAAGTTG | 58.609 | 47.619 | 6.55 | 0.00 | 42.66 | 3.16 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
28 | 29 | 1.293498 | CCTTAGGATCCCGATGGCG | 59.707 | 63.158 | 8.55 | 0.00 | 37.24 | 5.69 |
124 | 125 | 1.962807 | CTCCTGCTGATCAGAGTAGGG | 59.037 | 57.143 | 27.04 | 17.45 | 43.97 | 3.53 |
181 | 182 | 4.514401 | CCCTGTTCTGGGTAACTCATTAC | 58.486 | 47.826 | 6.60 | 0.00 | 42.25 | 1.89 |
201 | 202 | 0.665835 | AGCTTAGGTCTCGATCGCTG | 59.334 | 55.000 | 11.09 | 5.91 | 0.00 | 5.18 |
203 | 204 | 0.658829 | CTTAGGTCTCGATCGCTGCG | 60.659 | 60.000 | 17.25 | 17.25 | 0.00 | 5.18 |
258 | 259 | 5.959618 | AACACAGCTACCAAATTAGTTCC | 57.040 | 39.130 | 0.00 | 0.00 | 0.00 | 3.62 |
265 | 266 | 5.250774 | AGCTACCAAATTAGTTCCAAGGAGA | 59.749 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
276 | 277 | 6.650427 | AGTTCCAAGGAGAATTGTAAAACC | 57.350 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
291 | 292 | 7.979115 | TTGTAAAACCTTGTGAGATTTTTCG | 57.021 | 32.000 | 0.00 | 0.00 | 0.00 | 3.46 |
292 | 293 | 6.500041 | TGTAAAACCTTGTGAGATTTTTCGG | 58.500 | 36.000 | 0.00 | 0.00 | 0.00 | 4.30 |
293 | 294 | 3.643159 | AACCTTGTGAGATTTTTCGGC | 57.357 | 42.857 | 0.00 | 0.00 | 0.00 | 5.54 |
294 | 295 | 2.863809 | ACCTTGTGAGATTTTTCGGCT | 58.136 | 42.857 | 0.00 | 0.00 | 0.00 | 5.52 |
296 | 297 | 2.095059 | CCTTGTGAGATTTTTCGGCTGG | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
297 | 298 | 2.559698 | TGTGAGATTTTTCGGCTGGA | 57.440 | 45.000 | 0.00 | 0.00 | 0.00 | 3.86 |
298 | 299 | 2.426522 | TGTGAGATTTTTCGGCTGGAG | 58.573 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
322 | 325 | 0.108992 | TCCAGTTCGGCGTGTATGTC | 60.109 | 55.000 | 6.85 | 0.00 | 33.14 | 3.06 |
339 | 342 | 2.267426 | TGTCGGTGTTTGATCATAGCG | 58.733 | 47.619 | 15.98 | 15.98 | 35.59 | 4.26 |
340 | 343 | 2.094442 | TGTCGGTGTTTGATCATAGCGA | 60.094 | 45.455 | 18.97 | 18.97 | 40.21 | 4.93 |
341 | 344 | 2.535984 | GTCGGTGTTTGATCATAGCGAG | 59.464 | 50.000 | 21.66 | 5.01 | 42.61 | 5.03 |
342 | 345 | 1.860950 | CGGTGTTTGATCATAGCGAGG | 59.139 | 52.381 | 16.72 | 0.00 | 36.26 | 4.63 |
343 | 346 | 2.738643 | CGGTGTTTGATCATAGCGAGGT | 60.739 | 50.000 | 16.72 | 0.00 | 36.26 | 3.85 |
344 | 347 | 2.866762 | GGTGTTTGATCATAGCGAGGTC | 59.133 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
345 | 348 | 2.535984 | GTGTTTGATCATAGCGAGGTCG | 59.464 | 50.000 | 0.00 | 0.00 | 43.27 | 4.79 |
346 | 349 | 2.128035 | GTTTGATCATAGCGAGGTCGG | 58.872 | 52.381 | 0.00 | 0.00 | 40.23 | 4.79 |
347 | 350 | 0.032130 | TTGATCATAGCGAGGTCGGC | 59.968 | 55.000 | 0.00 | 0.00 | 40.23 | 5.54 |
348 | 351 | 1.442857 | GATCATAGCGAGGTCGGCG | 60.443 | 63.158 | 0.00 | 0.00 | 40.23 | 6.46 |
349 | 352 | 2.131294 | GATCATAGCGAGGTCGGCGT | 62.131 | 60.000 | 6.85 | 0.00 | 40.23 | 5.68 |
350 | 353 | 2.407846 | ATCATAGCGAGGTCGGCGTG | 62.408 | 60.000 | 6.85 | 0.00 | 40.23 | 5.34 |
351 | 354 | 3.138798 | ATAGCGAGGTCGGCGTGT | 61.139 | 61.111 | 6.85 | 0.00 | 40.23 | 4.49 |
352 | 355 | 1.820906 | ATAGCGAGGTCGGCGTGTA | 60.821 | 57.895 | 6.85 | 0.00 | 40.23 | 2.90 |
353 | 356 | 1.170919 | ATAGCGAGGTCGGCGTGTAT | 61.171 | 55.000 | 6.85 | 0.00 | 40.23 | 2.29 |
354 | 357 | 2.055310 | TAGCGAGGTCGGCGTGTATG | 62.055 | 60.000 | 6.85 | 0.00 | 40.23 | 2.39 |
355 | 358 | 2.488355 | CGAGGTCGGCGTGTATGT | 59.512 | 61.111 | 6.85 | 0.00 | 35.37 | 2.29 |
356 | 359 | 1.585521 | CGAGGTCGGCGTGTATGTC | 60.586 | 63.158 | 6.85 | 0.00 | 35.37 | 3.06 |
357 | 360 | 1.585521 | GAGGTCGGCGTGTATGTCG | 60.586 | 63.158 | 6.85 | 0.00 | 38.57 | 4.35 |
358 | 361 | 2.581409 | GGTCGGCGTGTATGTCGG | 60.581 | 66.667 | 6.85 | 0.00 | 37.60 | 4.79 |
359 | 362 | 2.180017 | GTCGGCGTGTATGTCGGT | 59.820 | 61.111 | 6.85 | 0.00 | 37.60 | 4.69 |
360 | 363 | 2.156446 | GTCGGCGTGTATGTCGGTG | 61.156 | 63.158 | 6.85 | 0.00 | 37.60 | 4.94 |
361 | 364 | 2.126228 | CGGCGTGTATGTCGGTGT | 60.126 | 61.111 | 0.00 | 0.00 | 32.26 | 4.16 |
362 | 365 | 1.735198 | CGGCGTGTATGTCGGTGTT | 60.735 | 57.895 | 0.00 | 0.00 | 32.26 | 3.32 |
363 | 366 | 1.286354 | CGGCGTGTATGTCGGTGTTT | 61.286 | 55.000 | 0.00 | 0.00 | 32.26 | 2.83 |
364 | 367 | 0.165079 | GGCGTGTATGTCGGTGTTTG | 59.835 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
365 | 368 | 1.141645 | GCGTGTATGTCGGTGTTTGA | 58.858 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
366 | 369 | 1.730064 | GCGTGTATGTCGGTGTTTGAT | 59.270 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
367 | 370 | 2.222729 | GCGTGTATGTCGGTGTTTGATC | 60.223 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
368 | 371 | 2.990514 | CGTGTATGTCGGTGTTTGATCA | 59.009 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
369 | 372 | 3.616821 | CGTGTATGTCGGTGTTTGATCAT | 59.383 | 43.478 | 0.00 | 0.00 | 0.00 | 2.45 |
370 | 373 | 4.801516 | CGTGTATGTCGGTGTTTGATCATA | 59.198 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
371 | 374 | 5.051708 | CGTGTATGTCGGTGTTTGATCATAG | 60.052 | 44.000 | 0.00 | 0.00 | 0.00 | 2.23 |
372 | 375 | 4.808895 | TGTATGTCGGTGTTTGATCATAGC | 59.191 | 41.667 | 0.00 | 0.00 | 0.00 | 2.97 |
373 | 376 | 2.267426 | TGTCGGTGTTTGATCATAGCG | 58.733 | 47.619 | 15.98 | 15.98 | 35.59 | 4.26 |
376 | 379 | 1.860950 | CGGTGTTTGATCATAGCGAGG | 59.139 | 52.381 | 16.72 | 0.00 | 36.26 | 4.63 |
385 | 388 | 3.067320 | TGATCATAGCGAGGTCTTGACAG | 59.933 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
388 | 391 | 3.067320 | TCATAGCGAGGTCTTGACAGATG | 59.933 | 47.826 | 3.08 | 0.00 | 0.00 | 2.90 |
389 | 392 | 1.261480 | AGCGAGGTCTTGACAGATGT | 58.739 | 50.000 | 3.08 | 0.00 | 0.00 | 3.06 |
390 | 393 | 2.447443 | AGCGAGGTCTTGACAGATGTA | 58.553 | 47.619 | 3.08 | 0.00 | 0.00 | 2.29 |
391 | 394 | 2.425312 | AGCGAGGTCTTGACAGATGTAG | 59.575 | 50.000 | 3.08 | 0.00 | 0.00 | 2.74 |
481 | 488 | 2.463653 | CACAAATTGCACACGTTTCTCG | 59.536 | 45.455 | 0.00 | 0.00 | 46.00 | 4.04 |
587 | 594 | 1.786579 | GCGTGGTTTCTGTGCAAAATC | 59.213 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
614 | 621 | 0.106918 | TCGCCCGGCTAAATTTCCAT | 60.107 | 50.000 | 8.05 | 0.00 | 0.00 | 3.41 |
617 | 624 | 1.269723 | GCCCGGCTAAATTTCCATAGC | 59.730 | 52.381 | 0.71 | 0.00 | 42.98 | 2.97 |
621 | 628 | 2.880890 | CGGCTAAATTTCCATAGCTGCT | 59.119 | 45.455 | 7.57 | 7.57 | 42.67 | 4.24 |
637 | 644 | 1.130749 | CTGCTCAGTTCTGCTTGCATC | 59.869 | 52.381 | 12.22 | 0.00 | 34.90 | 3.91 |
656 | 663 | 4.393155 | TGCACGGCTTCGCTCCAT | 62.393 | 61.111 | 0.00 | 0.00 | 37.41 | 3.41 |
657 | 664 | 2.202878 | GCACGGCTTCGCTCCATA | 60.203 | 61.111 | 0.00 | 0.00 | 37.41 | 2.74 |
658 | 665 | 1.813753 | GCACGGCTTCGCTCCATAA | 60.814 | 57.895 | 0.00 | 0.00 | 37.41 | 1.90 |
659 | 666 | 2.006772 | CACGGCTTCGCTCCATAAC | 58.993 | 57.895 | 0.00 | 0.00 | 37.41 | 1.89 |
660 | 667 | 1.518572 | ACGGCTTCGCTCCATAACG | 60.519 | 57.895 | 0.00 | 0.00 | 37.41 | 3.18 |
661 | 668 | 2.871427 | CGGCTTCGCTCCATAACGC | 61.871 | 63.158 | 0.00 | 0.00 | 0.00 | 4.84 |
662 | 669 | 1.813753 | GGCTTCGCTCCATAACGCA | 60.814 | 57.895 | 0.00 | 0.00 | 0.00 | 5.24 |
663 | 670 | 1.348594 | GCTTCGCTCCATAACGCAC | 59.651 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
664 | 671 | 1.358725 | GCTTCGCTCCATAACGCACA | 61.359 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
665 | 672 | 1.290203 | CTTCGCTCCATAACGCACAT | 58.710 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
666 | 673 | 1.004610 | CTTCGCTCCATAACGCACATG | 60.005 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
667 | 674 | 0.108377 | TCGCTCCATAACGCACATGT | 60.108 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
668 | 675 | 0.726827 | CGCTCCATAACGCACATGTT | 59.273 | 50.000 | 0.00 | 0.00 | 35.86 | 2.71 |
669 | 676 | 1.130373 | CGCTCCATAACGCACATGTTT | 59.870 | 47.619 | 0.00 | 0.00 | 33.32 | 2.83 |
670 | 677 | 2.518949 | GCTCCATAACGCACATGTTTG | 58.481 | 47.619 | 0.00 | 0.00 | 33.32 | 2.93 |
671 | 678 | 2.518949 | CTCCATAACGCACATGTTTGC | 58.481 | 47.619 | 0.00 | 0.00 | 39.28 | 3.68 |
672 | 679 | 1.882623 | TCCATAACGCACATGTTTGCA | 59.117 | 42.857 | 8.80 | 0.00 | 43.15 | 4.08 |
673 | 680 | 2.491298 | TCCATAACGCACATGTTTGCAT | 59.509 | 40.909 | 8.80 | 0.17 | 43.15 | 3.96 |
674 | 681 | 3.056962 | TCCATAACGCACATGTTTGCATT | 60.057 | 39.130 | 8.80 | 2.40 | 43.15 | 3.56 |
675 | 682 | 4.156739 | TCCATAACGCACATGTTTGCATTA | 59.843 | 37.500 | 8.80 | 4.49 | 43.15 | 1.90 |
676 | 683 | 5.042593 | CCATAACGCACATGTTTGCATTAT | 58.957 | 37.500 | 8.80 | 6.48 | 40.54 | 1.28 |
677 | 684 | 5.519566 | CCATAACGCACATGTTTGCATTATT | 59.480 | 36.000 | 6.83 | 0.29 | 37.54 | 1.40 |
678 | 685 | 6.035866 | CCATAACGCACATGTTTGCATTATTT | 59.964 | 34.615 | 6.83 | 0.00 | 37.54 | 1.40 |
679 | 686 | 5.921004 | AACGCACATGTTTGCATTATTTT | 57.079 | 30.435 | 8.80 | 0.00 | 43.15 | 1.82 |
680 | 687 | 5.921004 | ACGCACATGTTTGCATTATTTTT | 57.079 | 30.435 | 8.80 | 0.00 | 43.15 | 1.94 |
681 | 688 | 5.677936 | ACGCACATGTTTGCATTATTTTTG | 58.322 | 33.333 | 8.80 | 0.00 | 43.15 | 2.44 |
682 | 689 | 5.464722 | ACGCACATGTTTGCATTATTTTTGA | 59.535 | 32.000 | 8.80 | 0.00 | 43.15 | 2.69 |
683 | 690 | 6.018425 | ACGCACATGTTTGCATTATTTTTGAA | 60.018 | 30.769 | 8.80 | 0.00 | 43.15 | 2.69 |
684 | 691 | 7.016466 | CGCACATGTTTGCATTATTTTTGAAT | 58.984 | 30.769 | 8.80 | 0.00 | 43.15 | 2.57 |
685 | 692 | 7.534578 | CGCACATGTTTGCATTATTTTTGAATT | 59.465 | 29.630 | 8.80 | 0.00 | 43.15 | 2.17 |
686 | 693 | 9.182933 | GCACATGTTTGCATTATTTTTGAATTT | 57.817 | 25.926 | 0.00 | 0.00 | 42.49 | 1.82 |
703 | 710 | 8.776376 | TTTGAATTTATTTCAGGATTTCTGGC | 57.224 | 30.769 | 0.00 | 0.00 | 44.90 | 4.85 |
704 | 711 | 7.479352 | TGAATTTATTTCAGGATTTCTGGCA | 57.521 | 32.000 | 0.00 | 0.00 | 43.53 | 4.92 |
705 | 712 | 7.905265 | TGAATTTATTTCAGGATTTCTGGCAA | 58.095 | 30.769 | 0.00 | 0.00 | 43.53 | 4.52 |
706 | 713 | 8.542080 | TGAATTTATTTCAGGATTTCTGGCAAT | 58.458 | 29.630 | 0.00 | 0.00 | 43.53 | 3.56 |
707 | 714 | 8.726870 | AATTTATTTCAGGATTTCTGGCAATG | 57.273 | 30.769 | 0.00 | 0.00 | 43.53 | 2.82 |
708 | 715 | 3.598019 | TTTCAGGATTTCTGGCAATGC | 57.402 | 42.857 | 0.00 | 0.00 | 43.53 | 3.56 |
709 | 716 | 1.097232 | TCAGGATTTCTGGCAATGCG | 58.903 | 50.000 | 0.00 | 0.00 | 43.53 | 4.73 |
710 | 717 | 0.526954 | CAGGATTTCTGGCAATGCGC | 60.527 | 55.000 | 0.00 | 0.00 | 39.76 | 6.09 |
711 | 718 | 1.587088 | GGATTTCTGGCAATGCGCG | 60.587 | 57.895 | 0.00 | 0.00 | 43.84 | 6.86 |
712 | 719 | 1.137404 | GATTTCTGGCAATGCGCGT | 59.863 | 52.632 | 8.43 | 0.00 | 43.84 | 6.01 |
713 | 720 | 0.456653 | GATTTCTGGCAATGCGCGTT | 60.457 | 50.000 | 9.57 | 9.57 | 43.84 | 4.84 |
714 | 721 | 0.456653 | ATTTCTGGCAATGCGCGTTC | 60.457 | 50.000 | 12.97 | 7.52 | 43.84 | 3.95 |
715 | 722 | 1.790090 | TTTCTGGCAATGCGCGTTCA | 61.790 | 50.000 | 12.97 | 7.74 | 43.84 | 3.18 |
716 | 723 | 1.585267 | TTCTGGCAATGCGCGTTCAT | 61.585 | 50.000 | 12.97 | 0.00 | 43.84 | 2.57 |
717 | 724 | 1.153978 | CTGGCAATGCGCGTTCATT | 60.154 | 52.632 | 12.97 | 7.09 | 43.84 | 2.57 |
718 | 725 | 0.098552 | CTGGCAATGCGCGTTCATTA | 59.901 | 50.000 | 12.97 | 0.00 | 43.84 | 1.90 |
719 | 726 | 0.737804 | TGGCAATGCGCGTTCATTAT | 59.262 | 45.000 | 12.97 | 0.00 | 43.84 | 1.28 |
720 | 727 | 1.133982 | TGGCAATGCGCGTTCATTATT | 59.866 | 42.857 | 12.97 | 0.00 | 43.84 | 1.40 |
721 | 728 | 2.192624 | GGCAATGCGCGTTCATTATTT | 58.807 | 42.857 | 12.97 | 0.00 | 43.84 | 1.40 |
722 | 729 | 2.602660 | GGCAATGCGCGTTCATTATTTT | 59.397 | 40.909 | 12.97 | 0.00 | 43.84 | 1.82 |
723 | 730 | 3.061965 | GGCAATGCGCGTTCATTATTTTT | 59.938 | 39.130 | 12.97 | 0.00 | 43.84 | 1.94 |
724 | 731 | 4.014685 | GCAATGCGCGTTCATTATTTTTG | 58.985 | 39.130 | 12.97 | 0.00 | 35.12 | 2.44 |
725 | 732 | 4.567127 | CAATGCGCGTTCATTATTTTTGG | 58.433 | 39.130 | 12.97 | 0.00 | 35.12 | 3.28 |
726 | 733 | 3.560902 | TGCGCGTTCATTATTTTTGGA | 57.439 | 38.095 | 8.43 | 0.00 | 0.00 | 3.53 |
727 | 734 | 4.103365 | TGCGCGTTCATTATTTTTGGAT | 57.897 | 36.364 | 8.43 | 0.00 | 0.00 | 3.41 |
728 | 735 | 4.489810 | TGCGCGTTCATTATTTTTGGATT | 58.510 | 34.783 | 8.43 | 0.00 | 0.00 | 3.01 |
729 | 736 | 4.926238 | TGCGCGTTCATTATTTTTGGATTT | 59.074 | 33.333 | 8.43 | 0.00 | 0.00 | 2.17 |
730 | 737 | 6.093404 | TGCGCGTTCATTATTTTTGGATTTA | 58.907 | 32.000 | 8.43 | 0.00 | 0.00 | 1.40 |
731 | 738 | 6.754209 | TGCGCGTTCATTATTTTTGGATTTAT | 59.246 | 30.769 | 8.43 | 0.00 | 0.00 | 1.40 |
732 | 739 | 7.276658 | TGCGCGTTCATTATTTTTGGATTTATT | 59.723 | 29.630 | 8.43 | 0.00 | 0.00 | 1.40 |
733 | 740 | 8.113675 | GCGCGTTCATTATTTTTGGATTTATTT | 58.886 | 29.630 | 8.43 | 0.00 | 0.00 | 1.40 |
734 | 741 | 9.618410 | CGCGTTCATTATTTTTGGATTTATTTC | 57.382 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
747 | 754 | 8.844441 | TTGGATTTATTTCTAAATTTACGGCG | 57.156 | 30.769 | 4.80 | 4.80 | 37.61 | 6.46 |
748 | 755 | 8.211116 | TGGATTTATTTCTAAATTTACGGCGA | 57.789 | 30.769 | 16.62 | 0.00 | 37.61 | 5.54 |
749 | 756 | 8.842280 | TGGATTTATTTCTAAATTTACGGCGAT | 58.158 | 29.630 | 16.62 | 0.00 | 37.61 | 4.58 |
750 | 757 | 9.113876 | GGATTTATTTCTAAATTTACGGCGATG | 57.886 | 33.333 | 16.62 | 0.00 | 37.61 | 3.84 |
751 | 758 | 7.901874 | TTTATTTCTAAATTTACGGCGATGC | 57.098 | 32.000 | 16.62 | 0.00 | 0.00 | 3.91 |
752 | 759 | 3.579147 | TTCTAAATTTACGGCGATGCG | 57.421 | 42.857 | 16.62 | 0.00 | 0.00 | 4.73 |
765 | 772 | 1.284657 | CGATGCGCATTCAGAGAAGT | 58.715 | 50.000 | 26.12 | 0.00 | 0.00 | 3.01 |
766 | 773 | 1.662629 | CGATGCGCATTCAGAGAAGTT | 59.337 | 47.619 | 26.12 | 0.00 | 0.00 | 2.66 |
767 | 774 | 2.094894 | CGATGCGCATTCAGAGAAGTTT | 59.905 | 45.455 | 26.12 | 0.00 | 0.00 | 2.66 |
768 | 775 | 3.425359 | CGATGCGCATTCAGAGAAGTTTT | 60.425 | 43.478 | 26.12 | 0.00 | 0.00 | 2.43 |
769 | 776 | 3.988379 | TGCGCATTCAGAGAAGTTTTT | 57.012 | 38.095 | 5.66 | 0.00 | 0.00 | 1.94 |
770 | 777 | 3.888934 | TGCGCATTCAGAGAAGTTTTTC | 58.111 | 40.909 | 5.66 | 0.00 | 0.00 | 2.29 |
771 | 778 | 3.565482 | TGCGCATTCAGAGAAGTTTTTCT | 59.435 | 39.130 | 5.66 | 0.00 | 46.22 | 2.52 |
783 | 790 | 5.172205 | AGAAGTTTTTCTCGACTATGAGGC | 58.828 | 41.667 | 0.00 | 0.00 | 39.46 | 4.70 |
784 | 791 | 4.537135 | AGTTTTTCTCGACTATGAGGCA | 57.463 | 40.909 | 0.00 | 0.00 | 36.61 | 4.75 |
785 | 792 | 4.246458 | AGTTTTTCTCGACTATGAGGCAC | 58.754 | 43.478 | 0.00 | 0.00 | 36.61 | 5.01 |
786 | 793 | 2.961526 | TTTCTCGACTATGAGGCACC | 57.038 | 50.000 | 0.00 | 0.00 | 36.61 | 5.01 |
787 | 794 | 2.145397 | TTCTCGACTATGAGGCACCT | 57.855 | 50.000 | 0.00 | 0.00 | 36.61 | 4.00 |
788 | 795 | 1.393603 | TCTCGACTATGAGGCACCTG | 58.606 | 55.000 | 0.00 | 0.00 | 36.61 | 4.00 |
789 | 796 | 1.107114 | CTCGACTATGAGGCACCTGT | 58.893 | 55.000 | 0.00 | 0.00 | 32.18 | 4.00 |
790 | 797 | 0.817654 | TCGACTATGAGGCACCTGTG | 59.182 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
791 | 798 | 0.817654 | CGACTATGAGGCACCTGTGA | 59.182 | 55.000 | 0.51 | 0.00 | 0.00 | 3.58 |
792 | 799 | 1.410517 | CGACTATGAGGCACCTGTGAT | 59.589 | 52.381 | 0.51 | 0.00 | 0.00 | 3.06 |
793 | 800 | 2.800985 | CGACTATGAGGCACCTGTGATG | 60.801 | 54.545 | 0.51 | 0.00 | 0.00 | 3.07 |
794 | 801 | 2.432146 | GACTATGAGGCACCTGTGATGA | 59.568 | 50.000 | 0.51 | 0.00 | 0.00 | 2.92 |
795 | 802 | 2.169352 | ACTATGAGGCACCTGTGATGAC | 59.831 | 50.000 | 0.51 | 0.00 | 0.00 | 3.06 |
796 | 803 | 1.283347 | ATGAGGCACCTGTGATGACT | 58.717 | 50.000 | 0.51 | 0.00 | 38.49 | 3.41 |
797 | 804 | 1.059098 | TGAGGCACCTGTGATGACTT | 58.941 | 50.000 | 0.51 | 0.00 | 34.75 | 3.01 |
798 | 805 | 1.002430 | TGAGGCACCTGTGATGACTTC | 59.998 | 52.381 | 0.51 | 0.00 | 34.75 | 3.01 |
799 | 806 | 0.036952 | AGGCACCTGTGATGACTTCG | 60.037 | 55.000 | 0.51 | 0.00 | 27.74 | 3.79 |
800 | 807 | 0.320771 | GGCACCTGTGATGACTTCGT | 60.321 | 55.000 | 0.51 | 0.00 | 0.00 | 3.85 |
801 | 808 | 0.792640 | GCACCTGTGATGACTTCGTG | 59.207 | 55.000 | 0.51 | 0.00 | 0.00 | 4.35 |
802 | 809 | 1.605457 | GCACCTGTGATGACTTCGTGA | 60.605 | 52.381 | 0.51 | 0.00 | 0.00 | 4.35 |
803 | 810 | 2.332104 | CACCTGTGATGACTTCGTGAG | 58.668 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
804 | 811 | 2.029918 | CACCTGTGATGACTTCGTGAGA | 60.030 | 50.000 | 0.00 | 0.00 | 39.20 | 3.27 |
805 | 812 | 2.828520 | ACCTGTGATGACTTCGTGAGAT | 59.171 | 45.455 | 0.00 | 0.00 | 41.60 | 2.75 |
806 | 813 | 3.185330 | CCTGTGATGACTTCGTGAGATG | 58.815 | 50.000 | 0.00 | 0.00 | 41.60 | 2.90 |
807 | 814 | 2.602211 | CTGTGATGACTTCGTGAGATGC | 59.398 | 50.000 | 0.00 | 0.00 | 41.60 | 3.91 |
808 | 815 | 2.232208 | TGTGATGACTTCGTGAGATGCT | 59.768 | 45.455 | 0.00 | 0.00 | 41.60 | 3.79 |
809 | 816 | 2.857152 | GTGATGACTTCGTGAGATGCTC | 59.143 | 50.000 | 0.00 | 0.00 | 41.60 | 4.26 |
810 | 817 | 2.493278 | TGATGACTTCGTGAGATGCTCA | 59.507 | 45.455 | 0.00 | 0.00 | 41.60 | 4.26 |
811 | 818 | 3.131755 | TGATGACTTCGTGAGATGCTCAT | 59.868 | 43.478 | 0.00 | 0.00 | 42.73 | 2.90 |
812 | 819 | 4.339247 | TGATGACTTCGTGAGATGCTCATA | 59.661 | 41.667 | 0.00 | 0.00 | 42.73 | 2.15 |
813 | 820 | 4.298744 | TGACTTCGTGAGATGCTCATAG | 57.701 | 45.455 | 0.00 | 2.44 | 42.73 | 2.23 |
814 | 821 | 3.067320 | TGACTTCGTGAGATGCTCATAGG | 59.933 | 47.826 | 0.00 | 0.00 | 42.73 | 2.57 |
815 | 822 | 2.363680 | ACTTCGTGAGATGCTCATAGGG | 59.636 | 50.000 | 0.00 | 0.00 | 42.73 | 3.53 |
816 | 823 | 2.073252 | TCGTGAGATGCTCATAGGGT | 57.927 | 50.000 | 0.00 | 0.00 | 42.73 | 4.34 |
817 | 824 | 3.223674 | TCGTGAGATGCTCATAGGGTA | 57.776 | 47.619 | 0.00 | 0.00 | 42.73 | 3.69 |
818 | 825 | 3.149981 | TCGTGAGATGCTCATAGGGTAG | 58.850 | 50.000 | 0.00 | 0.00 | 42.73 | 3.18 |
819 | 826 | 2.230025 | CGTGAGATGCTCATAGGGTAGG | 59.770 | 54.545 | 0.00 | 0.00 | 42.73 | 3.18 |
820 | 827 | 2.564947 | GTGAGATGCTCATAGGGTAGGG | 59.435 | 54.545 | 0.00 | 0.00 | 42.73 | 3.53 |
821 | 828 | 2.180086 | TGAGATGCTCATAGGGTAGGGT | 59.820 | 50.000 | 0.00 | 0.00 | 35.39 | 4.34 |
822 | 829 | 3.401342 | TGAGATGCTCATAGGGTAGGGTA | 59.599 | 47.826 | 0.00 | 0.00 | 35.39 | 3.69 |
823 | 830 | 4.045974 | TGAGATGCTCATAGGGTAGGGTAT | 59.954 | 45.833 | 0.00 | 0.00 | 35.39 | 2.73 |
824 | 831 | 5.026790 | GAGATGCTCATAGGGTAGGGTATT | 58.973 | 45.833 | 0.00 | 0.00 | 0.00 | 1.89 |
825 | 832 | 5.026790 | AGATGCTCATAGGGTAGGGTATTC | 58.973 | 45.833 | 0.00 | 0.00 | 0.00 | 1.75 |
826 | 833 | 3.162666 | TGCTCATAGGGTAGGGTATTCG | 58.837 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
827 | 834 | 3.163467 | GCTCATAGGGTAGGGTATTCGT | 58.837 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
828 | 835 | 3.056749 | GCTCATAGGGTAGGGTATTCGTG | 60.057 | 52.174 | 0.00 | 0.00 | 0.00 | 4.35 |
829 | 836 | 4.150359 | CTCATAGGGTAGGGTATTCGTGT | 58.850 | 47.826 | 0.00 | 0.00 | 0.00 | 4.49 |
830 | 837 | 3.893200 | TCATAGGGTAGGGTATTCGTGTG | 59.107 | 47.826 | 0.00 | 0.00 | 0.00 | 3.82 |
831 | 838 | 2.242882 | AGGGTAGGGTATTCGTGTGT | 57.757 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
832 | 839 | 2.543635 | AGGGTAGGGTATTCGTGTGTT | 58.456 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
833 | 840 | 2.498885 | AGGGTAGGGTATTCGTGTGTTC | 59.501 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
834 | 841 | 2.533266 | GGTAGGGTATTCGTGTGTTCG | 58.467 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
835 | 842 | 2.094545 | GGTAGGGTATTCGTGTGTTCGT | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
836 | 843 | 3.128589 | GGTAGGGTATTCGTGTGTTCGTA | 59.871 | 47.826 | 0.00 | 0.00 | 0.00 | 3.43 |
837 | 844 | 4.202050 | GGTAGGGTATTCGTGTGTTCGTAT | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
838 | 845 | 3.777478 | AGGGTATTCGTGTGTTCGTATG | 58.223 | 45.455 | 0.00 | 0.00 | 0.00 | 2.39 |
839 | 846 | 3.444742 | AGGGTATTCGTGTGTTCGTATGA | 59.555 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
840 | 847 | 4.082081 | AGGGTATTCGTGTGTTCGTATGAA | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
841 | 848 | 4.807304 | GGGTATTCGTGTGTTCGTATGAAT | 59.193 | 41.667 | 0.00 | 0.00 | 36.29 | 2.57 |
842 | 849 | 5.276678 | GGGTATTCGTGTGTTCGTATGAATG | 60.277 | 44.000 | 0.00 | 0.00 | 36.29 | 2.67 |
843 | 850 | 5.517411 | GGTATTCGTGTGTTCGTATGAATGA | 59.483 | 40.000 | 0.00 | 0.00 | 36.29 | 2.57 |
844 | 851 | 5.702622 | ATTCGTGTGTTCGTATGAATGAG | 57.297 | 39.130 | 0.00 | 0.00 | 36.29 | 2.90 |
845 | 852 | 4.168922 | TCGTGTGTTCGTATGAATGAGT | 57.831 | 40.909 | 0.00 | 0.00 | 36.29 | 3.41 |
846 | 853 | 3.917985 | TCGTGTGTTCGTATGAATGAGTG | 59.082 | 43.478 | 0.00 | 0.00 | 36.29 | 3.51 |
847 | 854 | 3.673338 | CGTGTGTTCGTATGAATGAGTGT | 59.327 | 43.478 | 0.00 | 0.00 | 36.29 | 3.55 |
848 | 855 | 4.854839 | CGTGTGTTCGTATGAATGAGTGTA | 59.145 | 41.667 | 0.00 | 0.00 | 36.29 | 2.90 |
849 | 856 | 5.515270 | CGTGTGTTCGTATGAATGAGTGTAT | 59.485 | 40.000 | 0.00 | 0.00 | 36.29 | 2.29 |
850 | 857 | 6.506357 | CGTGTGTTCGTATGAATGAGTGTATG | 60.506 | 42.308 | 0.00 | 0.00 | 36.29 | 2.39 |
851 | 858 | 6.310467 | GTGTGTTCGTATGAATGAGTGTATGT | 59.690 | 38.462 | 0.00 | 0.00 | 36.29 | 2.29 |
852 | 859 | 6.310224 | TGTGTTCGTATGAATGAGTGTATGTG | 59.690 | 38.462 | 0.00 | 0.00 | 36.29 | 3.21 |
853 | 860 | 6.310467 | GTGTTCGTATGAATGAGTGTATGTGT | 59.690 | 38.462 | 0.00 | 0.00 | 36.29 | 3.72 |
854 | 861 | 6.310224 | TGTTCGTATGAATGAGTGTATGTGTG | 59.690 | 38.462 | 0.00 | 0.00 | 36.29 | 3.82 |
855 | 862 | 5.961272 | TCGTATGAATGAGTGTATGTGTGT | 58.039 | 37.500 | 0.00 | 0.00 | 0.00 | 3.72 |
856 | 863 | 7.090953 | TCGTATGAATGAGTGTATGTGTGTA | 57.909 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
857 | 864 | 7.712797 | TCGTATGAATGAGTGTATGTGTGTAT | 58.287 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
858 | 865 | 8.842280 | TCGTATGAATGAGTGTATGTGTGTATA | 58.158 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
859 | 866 | 9.626045 | CGTATGAATGAGTGTATGTGTGTATAT | 57.374 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
865 | 872 | 9.645059 | AATGAGTGTATGTGTGTATATATCAGC | 57.355 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
866 | 873 | 7.305474 | TGAGTGTATGTGTGTATATATCAGCG | 58.695 | 38.462 | 0.00 | 0.00 | 0.00 | 5.18 |
867 | 874 | 7.040686 | TGAGTGTATGTGTGTATATATCAGCGT | 60.041 | 37.037 | 0.00 | 0.00 | 0.00 | 5.07 |
868 | 875 | 7.306213 | AGTGTATGTGTGTATATATCAGCGTC | 58.694 | 38.462 | 0.00 | 0.00 | 0.00 | 5.19 |
869 | 876 | 7.175119 | AGTGTATGTGTGTATATATCAGCGTCT | 59.825 | 37.037 | 0.00 | 0.00 | 0.00 | 4.18 |
870 | 877 | 7.271438 | GTGTATGTGTGTATATATCAGCGTCTG | 59.729 | 40.741 | 0.00 | 1.02 | 0.00 | 3.51 |
871 | 878 | 5.121221 | TGTGTGTATATATCAGCGTCTGG | 57.879 | 43.478 | 6.95 | 0.00 | 31.51 | 3.86 |
872 | 879 | 4.022329 | TGTGTGTATATATCAGCGTCTGGG | 60.022 | 45.833 | 6.95 | 0.00 | 31.51 | 4.45 |
873 | 880 | 4.022242 | GTGTGTATATATCAGCGTCTGGGT | 60.022 | 45.833 | 6.95 | 0.75 | 31.51 | 4.51 |
874 | 881 | 4.217767 | TGTGTATATATCAGCGTCTGGGTC | 59.782 | 45.833 | 6.95 | 0.00 | 31.51 | 4.46 |
875 | 882 | 4.459685 | GTGTATATATCAGCGTCTGGGTCT | 59.540 | 45.833 | 6.95 | 0.00 | 31.51 | 3.85 |
876 | 883 | 5.646793 | GTGTATATATCAGCGTCTGGGTCTA | 59.353 | 44.000 | 6.95 | 0.00 | 31.51 | 2.59 |
877 | 884 | 6.319152 | GTGTATATATCAGCGTCTGGGTCTAT | 59.681 | 42.308 | 6.95 | 3.66 | 31.51 | 1.98 |
878 | 885 | 7.498239 | GTGTATATATCAGCGTCTGGGTCTATA | 59.502 | 40.741 | 6.95 | 5.18 | 31.51 | 1.31 |
879 | 886 | 6.945938 | ATATATCAGCGTCTGGGTCTATAC | 57.054 | 41.667 | 6.95 | 0.00 | 31.51 | 1.47 |
880 | 887 | 1.688772 | TCAGCGTCTGGGTCTATACC | 58.311 | 55.000 | 6.95 | 0.00 | 45.97 | 2.73 |
929 | 936 | 2.127906 | CACGTGTTTGCGCCGTAC | 60.128 | 61.111 | 7.58 | 0.08 | 32.81 | 3.67 |
946 | 954 | 2.548067 | CGTACAGGAACCAGTTGAGCTT | 60.548 | 50.000 | 0.00 | 0.00 | 0.00 | 3.74 |
949 | 957 | 1.876156 | CAGGAACCAGTTGAGCTTGAC | 59.124 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
955 | 963 | 1.475751 | CCAGTTGAGCTTGACCACACT | 60.476 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
1592 | 1611 | 3.550656 | GTTCGACAGAACGCCCAG | 58.449 | 61.111 | 0.00 | 0.00 | 45.96 | 4.45 |
1723 | 1742 | 3.933048 | GAGGTGACGGTCCTCGGGA | 62.933 | 68.421 | 5.55 | 0.00 | 41.36 | 5.14 |
1782 | 1801 | 3.047877 | CGGTGGGTTGAGCGGTTC | 61.048 | 66.667 | 0.00 | 0.00 | 33.22 | 3.62 |
1818 | 1837 | 2.099652 | TTGGGAGGTCTGTGACGCTG | 62.100 | 60.000 | 0.00 | 0.00 | 32.65 | 5.18 |
1917 | 1936 | 1.540146 | CGGACTGTTGTGTCATGGACA | 60.540 | 52.381 | 0.00 | 0.00 | 40.50 | 4.02 |
1956 | 1975 | 2.983879 | AATGGAGGGCCGTGGGAAG | 61.984 | 63.158 | 0.65 | 0.00 | 36.79 | 3.46 |
1967 | 1986 | 2.935481 | TGGGAAGGAGGCTGTGGG | 60.935 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
1977 | 1996 | 2.358737 | GCTGTGGGGGTGTTCGAG | 60.359 | 66.667 | 0.00 | 0.00 | 0.00 | 4.04 |
1992 | 2011 | 2.386661 | TCGAGGAAATGAAGGCTGTC | 57.613 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1995 | 2014 | 0.693049 | AGGAAATGAAGGCTGTCGGT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2016 | 2035 | 3.333189 | CCGCCTGATGATGTCGCG | 61.333 | 66.667 | 0.00 | 0.00 | 0.00 | 5.87 |
2172 | 2191 | 3.142838 | GCCGGCATGGTTGAGCAT | 61.143 | 61.111 | 24.80 | 0.00 | 41.21 | 3.79 |
2208 | 2227 | 2.408835 | GCGATGCCCATGAAACCG | 59.591 | 61.111 | 0.00 | 0.00 | 0.00 | 4.44 |
2298 | 2317 | 3.539604 | CATCAGCAGGGACCTTCTTAAG | 58.460 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2409 | 2428 | 6.431234 | GGAGAGAGATGAGTAAGAGAGGAATC | 59.569 | 46.154 | 0.00 | 0.00 | 0.00 | 2.52 |
2421 | 2440 | 0.804989 | GAGGAATCACAAAGGTGCCG | 59.195 | 55.000 | 0.00 | 0.00 | 44.87 | 5.69 |
2769 | 2799 | 1.600663 | CGGGAGATCATAGTGCGTGAC | 60.601 | 57.143 | 0.00 | 0.00 | 0.00 | 3.67 |
2883 | 2917 | 2.079925 | GGTGCAGTGAAGAGTGGATTC | 58.920 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
2898 | 2932 | 3.066621 | GTGGATTCAACTTCAACAGCACA | 59.933 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
2908 | 2942 | 0.039798 | CAACAGCACATGCAGGTGAC | 60.040 | 55.000 | 33.75 | 23.41 | 46.47 | 3.67 |
2931 | 2965 | 5.937540 | ACCGTGAACTCATGATGTATTTTCA | 59.062 | 36.000 | 0.00 | 0.00 | 34.90 | 2.69 |
2937 | 2971 | 9.246670 | TGAACTCATGATGTATTTTCAAGGAAT | 57.753 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
2943 | 2977 | 8.814235 | CATGATGTATTTTCAAGGAATTTCTGC | 58.186 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
2944 | 2978 | 7.894708 | TGATGTATTTTCAAGGAATTTCTGCA | 58.105 | 30.769 | 0.00 | 0.00 | 0.00 | 4.41 |
2945 | 2979 | 8.366401 | TGATGTATTTTCAAGGAATTTCTGCAA | 58.634 | 29.630 | 0.00 | 0.00 | 0.00 | 4.08 |
2978 | 3012 | 6.098124 | TCCTTGAGGTTTGCCAATTTATATGG | 59.902 | 38.462 | 0.00 | 0.00 | 37.46 | 2.74 |
3013 | 3057 | 7.327032 | GCCAAAAACTGATGTTTACTGAAGATC | 59.673 | 37.037 | 0.00 | 0.00 | 44.70 | 2.75 |
3016 | 3060 | 7.440523 | AAACTGATGTTTACTGAAGATCACC | 57.559 | 36.000 | 0.00 | 0.00 | 41.54 | 4.02 |
3080 | 3125 | 5.003692 | TGAGTACTGAATGTCTCATCAGC | 57.996 | 43.478 | 0.00 | 0.00 | 45.50 | 4.26 |
3090 | 3423 | 6.600427 | TGAATGTCTCATCAGCACACATTTAT | 59.400 | 34.615 | 0.00 | 0.00 | 37.71 | 1.40 |
3164 | 3497 | 1.751927 | CCCCAGCTTGCATCCTGTC | 60.752 | 63.158 | 11.70 | 0.00 | 0.00 | 3.51 |
3165 | 3498 | 1.302285 | CCCAGCTTGCATCCTGTCT | 59.698 | 57.895 | 11.70 | 0.00 | 0.00 | 3.41 |
3426 | 3772 | 4.285020 | TCTATGAACTGTCTGCCATCTCT | 58.715 | 43.478 | 0.00 | 0.00 | 0.00 | 3.10 |
3430 | 3776 | 4.026052 | TGAACTGTCTGCCATCTCTATGA | 58.974 | 43.478 | 0.00 | 0.00 | 34.84 | 2.15 |
3445 | 3791 | 4.022503 | TCTCTATGATGTTGCTGATCTCGG | 60.023 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
3590 | 3936 | 8.648693 | ACTACATGGGTAATATTTCTCTGTACC | 58.351 | 37.037 | 0.00 | 0.00 | 34.63 | 3.34 |
3753 | 4100 | 2.874701 | CAGCCAATCTTATGAACCTCCG | 59.125 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3760 | 4107 | 4.931661 | TCTTATGAACCTCCGTGTATCC | 57.068 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
3783 | 4133 | 4.159120 | GCTGTTAGATCAAACCTTTTCGC | 58.841 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
3808 | 4159 | 4.700268 | TGCGTGATGTGCATCTTATTTT | 57.300 | 36.364 | 12.64 | 0.00 | 37.44 | 1.82 |
3811 | 4162 | 4.274069 | CGTGATGTGCATCTTATTTTCCG | 58.726 | 43.478 | 12.64 | 0.88 | 38.60 | 4.30 |
3812 | 4163 | 4.601019 | GTGATGTGCATCTTATTTTCCGG | 58.399 | 43.478 | 12.64 | 0.00 | 38.60 | 5.14 |
3813 | 4164 | 4.335315 | GTGATGTGCATCTTATTTTCCGGA | 59.665 | 41.667 | 0.00 | 0.00 | 38.60 | 5.14 |
3814 | 4165 | 4.576053 | TGATGTGCATCTTATTTTCCGGAG | 59.424 | 41.667 | 3.34 | 0.00 | 38.60 | 4.63 |
3815 | 4166 | 2.682856 | TGTGCATCTTATTTTCCGGAGC | 59.317 | 45.455 | 3.34 | 1.32 | 0.00 | 4.70 |
3816 | 4167 | 2.033424 | GTGCATCTTATTTTCCGGAGCC | 59.967 | 50.000 | 3.34 | 0.00 | 0.00 | 4.70 |
3817 | 4168 | 1.264288 | GCATCTTATTTTCCGGAGCCG | 59.736 | 52.381 | 3.34 | 1.06 | 39.44 | 5.52 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
28 | 29 | 1.112113 | TCCAGCTGACCGATACTTCC | 58.888 | 55.000 | 17.39 | 0.00 | 0.00 | 3.46 |
124 | 125 | 0.698238 | TCCATATGCCCAGCCCATAC | 59.302 | 55.000 | 0.00 | 0.00 | 0.00 | 2.39 |
181 | 182 | 0.665835 | AGCGATCGAGACCTAAGCTG | 59.334 | 55.000 | 21.57 | 0.00 | 31.76 | 4.24 |
203 | 204 | 4.032104 | CGAACTAAGTTTGGTGTATACGCC | 59.968 | 45.833 | 25.68 | 25.68 | 46.40 | 5.68 |
265 | 266 | 9.030301 | CGAAAAATCTCACAAGGTTTTACAATT | 57.970 | 29.630 | 0.00 | 0.00 | 43.47 | 2.32 |
276 | 277 | 2.813754 | TCCAGCCGAAAAATCTCACAAG | 59.186 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
279 | 280 | 2.675348 | CTCTCCAGCCGAAAAATCTCAC | 59.325 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
296 | 297 | 0.173708 | ACGCCGAACTGGATTCTCTC | 59.826 | 55.000 | 0.00 | 0.00 | 42.00 | 3.20 |
297 | 298 | 0.108615 | CACGCCGAACTGGATTCTCT | 60.109 | 55.000 | 0.00 | 0.00 | 42.00 | 3.10 |
298 | 299 | 0.389948 | ACACGCCGAACTGGATTCTC | 60.390 | 55.000 | 0.00 | 0.00 | 42.00 | 2.87 |
312 | 315 | 1.141645 | TCAAACACCGACATACACGC | 58.858 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
313 | 316 | 2.990514 | TGATCAAACACCGACATACACG | 59.009 | 45.455 | 0.00 | 0.00 | 0.00 | 4.49 |
322 | 325 | 1.860950 | CCTCGCTATGATCAAACACCG | 59.139 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
339 | 342 | 1.585521 | CGACATACACGCCGACCTC | 60.586 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
340 | 343 | 2.488355 | CGACATACACGCCGACCT | 59.512 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
341 | 344 | 2.581409 | CCGACATACACGCCGACC | 60.581 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
342 | 345 | 2.156446 | CACCGACATACACGCCGAC | 61.156 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
343 | 346 | 2.144833 | AACACCGACATACACGCCGA | 62.145 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
344 | 347 | 1.286354 | AAACACCGACATACACGCCG | 61.286 | 55.000 | 0.00 | 0.00 | 0.00 | 6.46 |
345 | 348 | 0.165079 | CAAACACCGACATACACGCC | 59.835 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
346 | 349 | 1.141645 | TCAAACACCGACATACACGC | 58.858 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
347 | 350 | 2.990514 | TGATCAAACACCGACATACACG | 59.009 | 45.455 | 0.00 | 0.00 | 0.00 | 4.49 |
348 | 351 | 5.276868 | GCTATGATCAAACACCGACATACAC | 60.277 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
349 | 352 | 4.808895 | GCTATGATCAAACACCGACATACA | 59.191 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
350 | 353 | 4.085055 | CGCTATGATCAAACACCGACATAC | 60.085 | 45.833 | 0.00 | 0.00 | 0.00 | 2.39 |
351 | 354 | 4.048504 | CGCTATGATCAAACACCGACATA | 58.951 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
352 | 355 | 2.866156 | CGCTATGATCAAACACCGACAT | 59.134 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
353 | 356 | 2.094442 | TCGCTATGATCAAACACCGACA | 60.094 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
354 | 357 | 2.535984 | CTCGCTATGATCAAACACCGAC | 59.464 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
355 | 358 | 2.481276 | CCTCGCTATGATCAAACACCGA | 60.481 | 50.000 | 0.00 | 3.51 | 0.00 | 4.69 |
356 | 359 | 1.860950 | CCTCGCTATGATCAAACACCG | 59.139 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
357 | 360 | 2.866762 | GACCTCGCTATGATCAAACACC | 59.133 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
358 | 361 | 3.786635 | AGACCTCGCTATGATCAAACAC | 58.213 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
359 | 362 | 4.081697 | TCAAGACCTCGCTATGATCAAACA | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
360 | 363 | 4.268884 | GTCAAGACCTCGCTATGATCAAAC | 59.731 | 45.833 | 0.00 | 0.00 | 0.00 | 2.93 |
361 | 364 | 4.081697 | TGTCAAGACCTCGCTATGATCAAA | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
362 | 365 | 3.447229 | TGTCAAGACCTCGCTATGATCAA | 59.553 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
363 | 366 | 3.023832 | TGTCAAGACCTCGCTATGATCA | 58.976 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
364 | 367 | 3.316588 | TCTGTCAAGACCTCGCTATGATC | 59.683 | 47.826 | 0.00 | 0.00 | 0.00 | 2.92 |
365 | 368 | 3.291584 | TCTGTCAAGACCTCGCTATGAT | 58.708 | 45.455 | 0.00 | 0.00 | 0.00 | 2.45 |
366 | 369 | 2.723273 | TCTGTCAAGACCTCGCTATGA | 58.277 | 47.619 | 0.00 | 0.00 | 0.00 | 2.15 |
367 | 370 | 3.181482 | ACATCTGTCAAGACCTCGCTATG | 60.181 | 47.826 | 0.00 | 0.00 | 34.48 | 2.23 |
368 | 371 | 3.027412 | ACATCTGTCAAGACCTCGCTAT | 58.973 | 45.455 | 0.00 | 0.00 | 34.48 | 2.97 |
369 | 372 | 2.447443 | ACATCTGTCAAGACCTCGCTA | 58.553 | 47.619 | 0.00 | 0.00 | 34.48 | 4.26 |
370 | 373 | 1.261480 | ACATCTGTCAAGACCTCGCT | 58.739 | 50.000 | 0.00 | 0.00 | 34.48 | 4.93 |
371 | 374 | 2.480416 | CCTACATCTGTCAAGACCTCGC | 60.480 | 54.545 | 0.00 | 0.00 | 34.48 | 5.03 |
372 | 375 | 2.480416 | GCCTACATCTGTCAAGACCTCG | 60.480 | 54.545 | 0.00 | 0.00 | 34.48 | 4.63 |
373 | 376 | 2.763448 | AGCCTACATCTGTCAAGACCTC | 59.237 | 50.000 | 0.00 | 0.00 | 34.48 | 3.85 |
376 | 379 | 3.056536 | TGTGAGCCTACATCTGTCAAGAC | 60.057 | 47.826 | 0.00 | 0.00 | 34.48 | 3.01 |
385 | 388 | 1.205655 | TGTGAGCTGTGAGCCTACATC | 59.794 | 52.381 | 0.00 | 0.00 | 43.77 | 3.06 |
388 | 391 | 1.066573 | ACATGTGAGCTGTGAGCCTAC | 60.067 | 52.381 | 0.00 | 0.00 | 43.77 | 3.18 |
389 | 392 | 1.269958 | ACATGTGAGCTGTGAGCCTA | 58.730 | 50.000 | 0.00 | 0.00 | 43.77 | 3.93 |
390 | 393 | 1.269958 | TACATGTGAGCTGTGAGCCT | 58.730 | 50.000 | 9.11 | 0.00 | 43.77 | 4.58 |
391 | 394 | 2.322355 | ATACATGTGAGCTGTGAGCC | 57.678 | 50.000 | 9.11 | 0.00 | 43.77 | 4.70 |
415 | 418 | 4.964897 | TCAGAGAATTTATCAGGAGGAGCA | 59.035 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
481 | 488 | 6.531594 | ACAAGCTGCTTTTCTTCAGTTTTTAC | 59.468 | 34.615 | 13.10 | 0.00 | 32.65 | 2.01 |
483 | 490 | 5.482006 | ACAAGCTGCTTTTCTTCAGTTTTT | 58.518 | 33.333 | 13.10 | 0.00 | 32.65 | 1.94 |
484 | 491 | 5.077134 | ACAAGCTGCTTTTCTTCAGTTTT | 57.923 | 34.783 | 13.10 | 0.00 | 32.65 | 2.43 |
485 | 492 | 4.400567 | AGACAAGCTGCTTTTCTTCAGTTT | 59.599 | 37.500 | 21.87 | 4.91 | 34.76 | 2.66 |
600 | 607 | 2.880890 | AGCAGCTATGGAAATTTAGCCG | 59.119 | 45.455 | 6.99 | 0.00 | 36.29 | 5.52 |
614 | 621 | 1.943046 | GCAAGCAGAACTGAGCAGCTA | 60.943 | 52.381 | 5.97 | 0.00 | 34.66 | 3.32 |
617 | 624 | 1.130749 | GATGCAAGCAGAACTGAGCAG | 59.869 | 52.381 | 16.75 | 0.00 | 37.63 | 4.24 |
621 | 628 | 1.150827 | CACGATGCAAGCAGAACTGA | 58.849 | 50.000 | 5.97 | 0.00 | 0.00 | 3.41 |
660 | 667 | 8.730970 | AATTCAAAAATAATGCAAACATGTGC | 57.269 | 26.923 | 0.00 | 0.00 | 45.15 | 4.57 |
680 | 687 | 7.479352 | TGCCAGAAATCCTGAAATAAATTCA | 57.521 | 32.000 | 0.00 | 0.00 | 45.78 | 2.57 |
681 | 688 | 8.823818 | CATTGCCAGAAATCCTGAAATAAATTC | 58.176 | 33.333 | 0.00 | 0.00 | 45.78 | 2.17 |
682 | 689 | 7.281549 | GCATTGCCAGAAATCCTGAAATAAATT | 59.718 | 33.333 | 0.00 | 0.00 | 45.78 | 1.82 |
683 | 690 | 6.764560 | GCATTGCCAGAAATCCTGAAATAAAT | 59.235 | 34.615 | 0.00 | 0.00 | 45.78 | 1.40 |
684 | 691 | 6.108015 | GCATTGCCAGAAATCCTGAAATAAA | 58.892 | 36.000 | 0.00 | 0.00 | 45.78 | 1.40 |
685 | 692 | 5.663456 | GCATTGCCAGAAATCCTGAAATAA | 58.337 | 37.500 | 0.00 | 0.00 | 45.78 | 1.40 |
686 | 693 | 4.202040 | CGCATTGCCAGAAATCCTGAAATA | 60.202 | 41.667 | 2.41 | 0.00 | 45.78 | 1.40 |
687 | 694 | 3.429822 | CGCATTGCCAGAAATCCTGAAAT | 60.430 | 43.478 | 2.41 | 0.00 | 45.78 | 2.17 |
688 | 695 | 2.094597 | CGCATTGCCAGAAATCCTGAAA | 60.095 | 45.455 | 2.41 | 0.00 | 45.78 | 2.69 |
689 | 696 | 1.473677 | CGCATTGCCAGAAATCCTGAA | 59.526 | 47.619 | 2.41 | 0.00 | 45.78 | 3.02 |
690 | 697 | 1.097232 | CGCATTGCCAGAAATCCTGA | 58.903 | 50.000 | 2.41 | 0.00 | 45.78 | 3.86 |
691 | 698 | 0.526954 | GCGCATTGCCAGAAATCCTG | 60.527 | 55.000 | 0.30 | 0.00 | 42.55 | 3.86 |
692 | 699 | 1.811860 | GCGCATTGCCAGAAATCCT | 59.188 | 52.632 | 0.30 | 0.00 | 37.76 | 3.24 |
693 | 700 | 1.587088 | CGCGCATTGCCAGAAATCC | 60.587 | 57.895 | 8.75 | 0.00 | 42.08 | 3.01 |
694 | 701 | 0.456653 | AACGCGCATTGCCAGAAATC | 60.457 | 50.000 | 5.73 | 0.00 | 42.08 | 2.17 |
695 | 702 | 0.456653 | GAACGCGCATTGCCAGAAAT | 60.457 | 50.000 | 5.73 | 0.00 | 42.08 | 2.17 |
696 | 703 | 1.081509 | GAACGCGCATTGCCAGAAA | 60.082 | 52.632 | 5.73 | 0.00 | 42.08 | 2.52 |
697 | 704 | 1.585267 | ATGAACGCGCATTGCCAGAA | 61.585 | 50.000 | 5.73 | 0.00 | 42.08 | 3.02 |
698 | 705 | 1.585267 | AATGAACGCGCATTGCCAGA | 61.585 | 50.000 | 5.73 | 0.00 | 42.08 | 3.86 |
699 | 706 | 0.098552 | TAATGAACGCGCATTGCCAG | 59.901 | 50.000 | 18.46 | 0.00 | 42.08 | 4.85 |
700 | 707 | 0.737804 | ATAATGAACGCGCATTGCCA | 59.262 | 45.000 | 18.46 | 0.00 | 42.08 | 4.92 |
701 | 708 | 1.838913 | AATAATGAACGCGCATTGCC | 58.161 | 45.000 | 18.46 | 0.00 | 42.08 | 4.52 |
702 | 709 | 3.905339 | AAAATAATGAACGCGCATTGC | 57.095 | 38.095 | 18.46 | 0.00 | 38.80 | 3.56 |
703 | 710 | 4.325741 | TCCAAAAATAATGAACGCGCATTG | 59.674 | 37.500 | 18.46 | 5.65 | 38.80 | 2.82 |
704 | 711 | 4.489810 | TCCAAAAATAATGAACGCGCATT | 58.510 | 34.783 | 5.73 | 11.73 | 41.15 | 3.56 |
705 | 712 | 4.103365 | TCCAAAAATAATGAACGCGCAT | 57.897 | 36.364 | 5.73 | 0.00 | 0.00 | 4.73 |
706 | 713 | 3.560902 | TCCAAAAATAATGAACGCGCA | 57.439 | 38.095 | 5.73 | 0.00 | 0.00 | 6.09 |
707 | 714 | 5.448926 | AAATCCAAAAATAATGAACGCGC | 57.551 | 34.783 | 5.73 | 0.00 | 0.00 | 6.86 |
708 | 715 | 9.618410 | GAAATAAATCCAAAAATAATGAACGCG | 57.382 | 29.630 | 3.53 | 3.53 | 0.00 | 6.01 |
721 | 728 | 9.291664 | CGCCGTAAATTTAGAAATAAATCCAAA | 57.708 | 29.630 | 0.00 | 0.00 | 0.00 | 3.28 |
722 | 729 | 8.675504 | TCGCCGTAAATTTAGAAATAAATCCAA | 58.324 | 29.630 | 0.00 | 0.00 | 0.00 | 3.53 |
723 | 730 | 8.211116 | TCGCCGTAAATTTAGAAATAAATCCA | 57.789 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
724 | 731 | 9.113876 | CATCGCCGTAAATTTAGAAATAAATCC | 57.886 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
725 | 732 | 8.627428 | GCATCGCCGTAAATTTAGAAATAAATC | 58.373 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
726 | 733 | 7.322699 | CGCATCGCCGTAAATTTAGAAATAAAT | 59.677 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
727 | 734 | 6.629649 | CGCATCGCCGTAAATTTAGAAATAAA | 59.370 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
728 | 735 | 6.130723 | CGCATCGCCGTAAATTTAGAAATAA | 58.869 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
729 | 736 | 5.672051 | CGCATCGCCGTAAATTTAGAAATA | 58.328 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
730 | 737 | 4.523813 | CGCATCGCCGTAAATTTAGAAAT | 58.476 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
731 | 738 | 3.930618 | CGCATCGCCGTAAATTTAGAAA | 58.069 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
732 | 739 | 3.579147 | CGCATCGCCGTAAATTTAGAA | 57.421 | 42.857 | 0.00 | 0.00 | 0.00 | 2.10 |
746 | 753 | 1.284657 | ACTTCTCTGAATGCGCATCG | 58.715 | 50.000 | 25.53 | 15.10 | 0.00 | 3.84 |
747 | 754 | 3.754188 | AAACTTCTCTGAATGCGCATC | 57.246 | 42.857 | 25.53 | 17.12 | 0.00 | 3.91 |
748 | 755 | 4.217118 | AGAAAAACTTCTCTGAATGCGCAT | 59.783 | 37.500 | 19.28 | 19.28 | 0.00 | 4.73 |
749 | 756 | 3.565482 | AGAAAAACTTCTCTGAATGCGCA | 59.435 | 39.130 | 14.96 | 14.96 | 0.00 | 6.09 |
750 | 757 | 4.152607 | AGAAAAACTTCTCTGAATGCGC | 57.847 | 40.909 | 0.00 | 0.00 | 0.00 | 6.09 |
751 | 758 | 4.150627 | TCGAGAAAAACTTCTCTGAATGCG | 59.849 | 41.667 | 11.88 | 0.00 | 43.94 | 4.73 |
752 | 759 | 5.178438 | AGTCGAGAAAAACTTCTCTGAATGC | 59.822 | 40.000 | 11.88 | 2.51 | 43.94 | 3.56 |
753 | 760 | 6.777526 | AGTCGAGAAAAACTTCTCTGAATG | 57.222 | 37.500 | 11.88 | 0.00 | 43.94 | 2.67 |
754 | 761 | 8.307483 | TCATAGTCGAGAAAAACTTCTCTGAAT | 58.693 | 33.333 | 11.88 | 11.59 | 43.94 | 2.57 |
755 | 762 | 7.658261 | TCATAGTCGAGAAAAACTTCTCTGAA | 58.342 | 34.615 | 11.88 | 0.83 | 43.94 | 3.02 |
756 | 763 | 7.215719 | TCATAGTCGAGAAAAACTTCTCTGA | 57.784 | 36.000 | 11.88 | 8.54 | 43.94 | 3.27 |
757 | 764 | 6.529829 | CCTCATAGTCGAGAAAAACTTCTCTG | 59.470 | 42.308 | 11.88 | 6.78 | 43.94 | 3.35 |
758 | 765 | 6.626302 | CCTCATAGTCGAGAAAAACTTCTCT | 58.374 | 40.000 | 11.88 | 0.00 | 43.94 | 3.10 |
759 | 766 | 5.289917 | GCCTCATAGTCGAGAAAAACTTCTC | 59.710 | 44.000 | 5.04 | 5.04 | 42.98 | 2.87 |
760 | 767 | 5.172205 | GCCTCATAGTCGAGAAAAACTTCT | 58.828 | 41.667 | 0.00 | 0.00 | 34.79 | 2.85 |
761 | 768 | 4.929808 | TGCCTCATAGTCGAGAAAAACTTC | 59.070 | 41.667 | 0.00 | 0.00 | 34.79 | 3.01 |
762 | 769 | 4.691216 | GTGCCTCATAGTCGAGAAAAACTT | 59.309 | 41.667 | 0.00 | 0.00 | 34.79 | 2.66 |
763 | 770 | 4.246458 | GTGCCTCATAGTCGAGAAAAACT | 58.754 | 43.478 | 0.00 | 0.00 | 34.79 | 2.66 |
764 | 771 | 3.371285 | GGTGCCTCATAGTCGAGAAAAAC | 59.629 | 47.826 | 0.00 | 0.00 | 34.79 | 2.43 |
765 | 772 | 3.260884 | AGGTGCCTCATAGTCGAGAAAAA | 59.739 | 43.478 | 0.00 | 0.00 | 34.79 | 1.94 |
766 | 773 | 2.832129 | AGGTGCCTCATAGTCGAGAAAA | 59.168 | 45.455 | 0.00 | 0.00 | 34.79 | 2.29 |
767 | 774 | 2.166459 | CAGGTGCCTCATAGTCGAGAAA | 59.834 | 50.000 | 0.00 | 0.00 | 34.79 | 2.52 |
768 | 775 | 1.751351 | CAGGTGCCTCATAGTCGAGAA | 59.249 | 52.381 | 0.00 | 0.00 | 34.79 | 2.87 |
769 | 776 | 1.341089 | ACAGGTGCCTCATAGTCGAGA | 60.341 | 52.381 | 0.00 | 0.00 | 34.79 | 4.04 |
770 | 777 | 1.107114 | ACAGGTGCCTCATAGTCGAG | 58.893 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
771 | 778 | 0.817654 | CACAGGTGCCTCATAGTCGA | 59.182 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
772 | 779 | 0.817654 | TCACAGGTGCCTCATAGTCG | 59.182 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
773 | 780 | 2.432146 | TCATCACAGGTGCCTCATAGTC | 59.568 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
774 | 781 | 2.169352 | GTCATCACAGGTGCCTCATAGT | 59.831 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
775 | 782 | 2.433604 | AGTCATCACAGGTGCCTCATAG | 59.566 | 50.000 | 0.00 | 0.00 | 0.00 | 2.23 |
776 | 783 | 2.470990 | AGTCATCACAGGTGCCTCATA | 58.529 | 47.619 | 0.00 | 0.00 | 0.00 | 2.15 |
777 | 784 | 1.283347 | AGTCATCACAGGTGCCTCAT | 58.717 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
778 | 785 | 1.002430 | GAAGTCATCACAGGTGCCTCA | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
779 | 786 | 1.731720 | GAAGTCATCACAGGTGCCTC | 58.268 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
780 | 787 | 0.036952 | CGAAGTCATCACAGGTGCCT | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
781 | 788 | 0.320771 | ACGAAGTCATCACAGGTGCC | 60.321 | 55.000 | 0.00 | 0.00 | 29.74 | 5.01 |
782 | 789 | 0.792640 | CACGAAGTCATCACAGGTGC | 59.207 | 55.000 | 0.00 | 0.00 | 41.61 | 5.01 |
783 | 790 | 2.029918 | TCTCACGAAGTCATCACAGGTG | 60.030 | 50.000 | 0.00 | 0.00 | 41.61 | 4.00 |
784 | 791 | 2.239400 | TCTCACGAAGTCATCACAGGT | 58.761 | 47.619 | 0.00 | 0.00 | 41.61 | 4.00 |
785 | 792 | 3.185330 | CATCTCACGAAGTCATCACAGG | 58.815 | 50.000 | 0.00 | 0.00 | 41.61 | 4.00 |
786 | 793 | 2.602211 | GCATCTCACGAAGTCATCACAG | 59.398 | 50.000 | 0.00 | 0.00 | 41.61 | 3.66 |
787 | 794 | 2.232208 | AGCATCTCACGAAGTCATCACA | 59.768 | 45.455 | 0.00 | 0.00 | 41.61 | 3.58 |
788 | 795 | 2.857152 | GAGCATCTCACGAAGTCATCAC | 59.143 | 50.000 | 0.00 | 0.00 | 41.61 | 3.06 |
789 | 796 | 2.493278 | TGAGCATCTCACGAAGTCATCA | 59.507 | 45.455 | 0.00 | 0.00 | 35.39 | 3.07 |
790 | 797 | 3.156511 | TGAGCATCTCACGAAGTCATC | 57.843 | 47.619 | 0.00 | 0.00 | 35.39 | 2.92 |
791 | 798 | 3.815856 | ATGAGCATCTCACGAAGTCAT | 57.184 | 42.857 | 0.00 | 0.00 | 43.63 | 3.06 |
792 | 799 | 3.067320 | CCTATGAGCATCTCACGAAGTCA | 59.933 | 47.826 | 0.00 | 0.00 | 43.63 | 3.41 |
793 | 800 | 3.551863 | CCCTATGAGCATCTCACGAAGTC | 60.552 | 52.174 | 0.00 | 0.00 | 43.63 | 3.01 |
794 | 801 | 2.363680 | CCCTATGAGCATCTCACGAAGT | 59.636 | 50.000 | 0.00 | 0.00 | 43.63 | 3.01 |
795 | 802 | 2.363680 | ACCCTATGAGCATCTCACGAAG | 59.636 | 50.000 | 0.00 | 0.00 | 43.63 | 3.79 |
796 | 803 | 2.388735 | ACCCTATGAGCATCTCACGAA | 58.611 | 47.619 | 0.00 | 0.00 | 43.63 | 3.85 |
797 | 804 | 2.073252 | ACCCTATGAGCATCTCACGA | 57.927 | 50.000 | 0.00 | 0.00 | 43.63 | 4.35 |
798 | 805 | 2.230025 | CCTACCCTATGAGCATCTCACG | 59.770 | 54.545 | 0.00 | 0.00 | 43.63 | 4.35 |
799 | 806 | 2.564947 | CCCTACCCTATGAGCATCTCAC | 59.435 | 54.545 | 0.00 | 0.00 | 43.63 | 3.51 |
800 | 807 | 2.180086 | ACCCTACCCTATGAGCATCTCA | 59.820 | 50.000 | 0.00 | 0.00 | 44.99 | 3.27 |
801 | 808 | 2.896039 | ACCCTACCCTATGAGCATCTC | 58.104 | 52.381 | 0.00 | 0.00 | 34.92 | 2.75 |
802 | 809 | 4.701333 | ATACCCTACCCTATGAGCATCT | 57.299 | 45.455 | 0.00 | 0.00 | 34.92 | 2.90 |
803 | 810 | 4.142138 | CGAATACCCTACCCTATGAGCATC | 60.142 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
804 | 811 | 3.769844 | CGAATACCCTACCCTATGAGCAT | 59.230 | 47.826 | 0.00 | 0.00 | 0.00 | 3.79 |
805 | 812 | 3.162666 | CGAATACCCTACCCTATGAGCA | 58.837 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
806 | 813 | 3.056749 | CACGAATACCCTACCCTATGAGC | 60.057 | 52.174 | 0.00 | 0.00 | 0.00 | 4.26 |
807 | 814 | 4.022242 | CACACGAATACCCTACCCTATGAG | 60.022 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
808 | 815 | 3.893200 | CACACGAATACCCTACCCTATGA | 59.107 | 47.826 | 0.00 | 0.00 | 0.00 | 2.15 |
809 | 816 | 3.640029 | ACACACGAATACCCTACCCTATG | 59.360 | 47.826 | 0.00 | 0.00 | 0.00 | 2.23 |
810 | 817 | 3.919834 | ACACACGAATACCCTACCCTAT | 58.080 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
811 | 818 | 3.386932 | ACACACGAATACCCTACCCTA | 57.613 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
812 | 819 | 2.242882 | ACACACGAATACCCTACCCT | 57.757 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
813 | 820 | 2.736400 | CGAACACACGAATACCCTACCC | 60.736 | 54.545 | 0.00 | 0.00 | 35.09 | 3.69 |
814 | 821 | 2.094545 | ACGAACACACGAATACCCTACC | 60.095 | 50.000 | 0.00 | 0.00 | 37.03 | 3.18 |
815 | 822 | 3.221964 | ACGAACACACGAATACCCTAC | 57.778 | 47.619 | 0.00 | 0.00 | 37.03 | 3.18 |
816 | 823 | 4.639755 | TCATACGAACACACGAATACCCTA | 59.360 | 41.667 | 0.00 | 0.00 | 37.03 | 3.53 |
817 | 824 | 3.444742 | TCATACGAACACACGAATACCCT | 59.555 | 43.478 | 0.00 | 0.00 | 37.03 | 4.34 |
818 | 825 | 3.772932 | TCATACGAACACACGAATACCC | 58.227 | 45.455 | 0.00 | 0.00 | 37.03 | 3.69 |
819 | 826 | 5.517411 | TCATTCATACGAACACACGAATACC | 59.483 | 40.000 | 0.00 | 0.00 | 32.81 | 2.73 |
820 | 827 | 6.252869 | ACTCATTCATACGAACACACGAATAC | 59.747 | 38.462 | 0.00 | 0.00 | 32.81 | 1.89 |
821 | 828 | 6.252655 | CACTCATTCATACGAACACACGAATA | 59.747 | 38.462 | 0.00 | 0.00 | 32.81 | 1.75 |
822 | 829 | 5.062183 | CACTCATTCATACGAACACACGAAT | 59.938 | 40.000 | 0.00 | 0.00 | 32.81 | 3.34 |
823 | 830 | 4.384547 | CACTCATTCATACGAACACACGAA | 59.615 | 41.667 | 0.00 | 0.00 | 32.81 | 3.85 |
824 | 831 | 3.917985 | CACTCATTCATACGAACACACGA | 59.082 | 43.478 | 0.00 | 0.00 | 32.81 | 4.35 |
825 | 832 | 3.673338 | ACACTCATTCATACGAACACACG | 59.327 | 43.478 | 0.00 | 0.00 | 32.81 | 4.49 |
826 | 833 | 6.310467 | ACATACACTCATTCATACGAACACAC | 59.690 | 38.462 | 0.00 | 0.00 | 32.81 | 3.82 |
827 | 834 | 6.310224 | CACATACACTCATTCATACGAACACA | 59.690 | 38.462 | 0.00 | 0.00 | 32.81 | 3.72 |
828 | 835 | 6.310467 | ACACATACACTCATTCATACGAACAC | 59.690 | 38.462 | 0.00 | 0.00 | 32.81 | 3.32 |
829 | 836 | 6.310224 | CACACATACACTCATTCATACGAACA | 59.690 | 38.462 | 0.00 | 0.00 | 32.81 | 3.18 |
830 | 837 | 6.310467 | ACACACATACACTCATTCATACGAAC | 59.690 | 38.462 | 0.00 | 0.00 | 32.81 | 3.95 |
831 | 838 | 6.394809 | ACACACATACACTCATTCATACGAA | 58.605 | 36.000 | 0.00 | 0.00 | 35.05 | 3.85 |
832 | 839 | 5.961272 | ACACACATACACTCATTCATACGA | 58.039 | 37.500 | 0.00 | 0.00 | 0.00 | 3.43 |
833 | 840 | 7.930513 | ATACACACATACACTCATTCATACG | 57.069 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
839 | 846 | 9.645059 | GCTGATATATACACACATACACTCATT | 57.355 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
840 | 847 | 7.970614 | CGCTGATATATACACACATACACTCAT | 59.029 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
841 | 848 | 7.040686 | ACGCTGATATATACACACATACACTCA | 60.041 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
842 | 849 | 7.306213 | ACGCTGATATATACACACATACACTC | 58.694 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
843 | 850 | 7.175119 | AGACGCTGATATATACACACATACACT | 59.825 | 37.037 | 0.00 | 0.00 | 0.00 | 3.55 |
844 | 851 | 7.271438 | CAGACGCTGATATATACACACATACAC | 59.729 | 40.741 | 1.18 | 0.00 | 32.44 | 2.90 |
845 | 852 | 7.305474 | CAGACGCTGATATATACACACATACA | 58.695 | 38.462 | 1.18 | 0.00 | 32.44 | 2.29 |
846 | 853 | 6.747739 | CCAGACGCTGATATATACACACATAC | 59.252 | 42.308 | 8.20 | 0.00 | 32.44 | 2.39 |
847 | 854 | 6.127730 | CCCAGACGCTGATATATACACACATA | 60.128 | 42.308 | 8.20 | 0.00 | 32.44 | 2.29 |
848 | 855 | 5.336770 | CCCAGACGCTGATATATACACACAT | 60.337 | 44.000 | 8.20 | 0.00 | 32.44 | 3.21 |
849 | 856 | 4.022329 | CCCAGACGCTGATATATACACACA | 60.022 | 45.833 | 8.20 | 0.00 | 32.44 | 3.72 |
850 | 857 | 4.022242 | ACCCAGACGCTGATATATACACAC | 60.022 | 45.833 | 8.20 | 0.00 | 32.44 | 3.82 |
851 | 858 | 4.149598 | ACCCAGACGCTGATATATACACA | 58.850 | 43.478 | 8.20 | 0.00 | 32.44 | 3.72 |
852 | 859 | 4.459685 | AGACCCAGACGCTGATATATACAC | 59.540 | 45.833 | 8.20 | 0.00 | 32.44 | 2.90 |
853 | 860 | 4.663334 | AGACCCAGACGCTGATATATACA | 58.337 | 43.478 | 8.20 | 0.00 | 32.44 | 2.29 |
854 | 861 | 6.945938 | ATAGACCCAGACGCTGATATATAC | 57.054 | 41.667 | 8.20 | 0.00 | 32.44 | 1.47 |
855 | 862 | 6.996879 | GGTATAGACCCAGACGCTGATATATA | 59.003 | 42.308 | 8.20 | 5.42 | 40.23 | 0.86 |
856 | 863 | 5.828859 | GGTATAGACCCAGACGCTGATATAT | 59.171 | 44.000 | 8.20 | 6.15 | 40.23 | 0.86 |
857 | 864 | 5.191426 | GGTATAGACCCAGACGCTGATATA | 58.809 | 45.833 | 8.20 | 3.94 | 40.23 | 0.86 |
858 | 865 | 4.017808 | GGTATAGACCCAGACGCTGATAT | 58.982 | 47.826 | 8.20 | 4.65 | 40.23 | 1.63 |
859 | 866 | 3.418995 | GGTATAGACCCAGACGCTGATA | 58.581 | 50.000 | 8.20 | 0.00 | 40.23 | 2.15 |
860 | 867 | 2.240279 | GGTATAGACCCAGACGCTGAT | 58.760 | 52.381 | 8.20 | 0.00 | 40.23 | 2.90 |
861 | 868 | 1.688772 | GGTATAGACCCAGACGCTGA | 58.311 | 55.000 | 8.20 | 0.00 | 40.23 | 4.26 |
862 | 869 | 0.311165 | CGGTATAGACCCAGACGCTG | 59.689 | 60.000 | 0.00 | 0.52 | 43.64 | 5.18 |
863 | 870 | 0.106819 | ACGGTATAGACCCAGACGCT | 60.107 | 55.000 | 0.00 | 0.00 | 43.64 | 5.07 |
864 | 871 | 0.030369 | CACGGTATAGACCCAGACGC | 59.970 | 60.000 | 0.00 | 0.00 | 43.64 | 5.19 |
865 | 872 | 1.386533 | ACACGGTATAGACCCAGACG | 58.613 | 55.000 | 0.00 | 0.00 | 43.64 | 4.18 |
866 | 873 | 3.881937 | AAACACGGTATAGACCCAGAC | 57.118 | 47.619 | 0.00 | 0.00 | 43.64 | 3.51 |
867 | 874 | 5.999205 | TTTAAACACGGTATAGACCCAGA | 57.001 | 39.130 | 0.00 | 0.00 | 43.64 | 3.86 |
899 | 906 | 3.481112 | AACACGTGCGTTCTTCTTTTT | 57.519 | 38.095 | 17.22 | 0.00 | 0.00 | 1.94 |
900 | 907 | 3.168193 | CAAACACGTGCGTTCTTCTTTT | 58.832 | 40.909 | 17.22 | 2.12 | 0.00 | 2.27 |
901 | 908 | 2.780993 | CAAACACGTGCGTTCTTCTTT | 58.219 | 42.857 | 17.22 | 2.90 | 0.00 | 2.52 |
902 | 909 | 1.531058 | GCAAACACGTGCGTTCTTCTT | 60.531 | 47.619 | 17.22 | 0.00 | 34.21 | 2.52 |
903 | 910 | 0.027586 | GCAAACACGTGCGTTCTTCT | 59.972 | 50.000 | 17.22 | 0.00 | 34.21 | 2.85 |
904 | 911 | 2.480593 | GCAAACACGTGCGTTCTTC | 58.519 | 52.632 | 17.22 | 0.00 | 34.21 | 2.87 |
905 | 912 | 4.682306 | GCAAACACGTGCGTTCTT | 57.318 | 50.000 | 17.22 | 0.00 | 34.21 | 2.52 |
915 | 922 | 1.500512 | TTCCTGTACGGCGCAAACAC | 61.501 | 55.000 | 10.83 | 1.28 | 0.00 | 3.32 |
929 | 936 | 1.876156 | GTCAAGCTCAACTGGTTCCTG | 59.124 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
946 | 954 | 1.367471 | CCTTCGCTGAGTGTGGTCA | 59.633 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
949 | 957 | 0.249868 | TTGACCTTCGCTGAGTGTGG | 60.250 | 55.000 | 6.34 | 6.34 | 0.00 | 4.17 |
955 | 963 | 1.503818 | GCGGTTTTGACCTTCGCTGA | 61.504 | 55.000 | 0.00 | 0.00 | 42.62 | 4.26 |
987 | 1006 | 2.574212 | GGCATTTGCTCGAACGCG | 60.574 | 61.111 | 3.53 | 3.53 | 41.70 | 6.01 |
1122 | 1141 | 2.674220 | GGGCTGGAGGAGGGAACTG | 61.674 | 68.421 | 0.00 | 0.00 | 44.43 | 3.16 |
1124 | 1143 | 3.412408 | GGGGCTGGAGGAGGGAAC | 61.412 | 72.222 | 0.00 | 0.00 | 0.00 | 3.62 |
1125 | 1144 | 3.626596 | AGGGGCTGGAGGAGGGAA | 61.627 | 66.667 | 0.00 | 0.00 | 0.00 | 3.97 |
1288 | 1307 | 2.100631 | CGCGGATGAGGGTGTTGAC | 61.101 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
1782 | 1801 | 3.031417 | AATTCCCTCCCTCGCCACG | 62.031 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
1917 | 1936 | 1.402968 | GCAAGTGCATCAATCACCGAT | 59.597 | 47.619 | 0.00 | 0.00 | 41.59 | 4.18 |
1956 | 1975 | 3.569200 | GAACACCCCCACAGCCTCC | 62.569 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1967 | 1986 | 2.084546 | CCTTCATTTCCTCGAACACCC | 58.915 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
1977 | 1996 | 0.804989 | CACCGACAGCCTTCATTTCC | 59.195 | 55.000 | 0.00 | 0.00 | 0.00 | 3.13 |
1995 | 2014 | 1.450134 | GACATCATCAGGCGGCACA | 60.450 | 57.895 | 13.08 | 0.00 | 0.00 | 4.57 |
2001 | 2020 | 1.083806 | TGAACGCGACATCATCAGGC | 61.084 | 55.000 | 15.93 | 0.00 | 0.00 | 4.85 |
2016 | 2035 | 1.021390 | CAGTGAGCACCCCGATGAAC | 61.021 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2172 | 2191 | 1.440938 | CGCGAACAAACTCCAACCCA | 61.441 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
2232 | 2251 | 1.502163 | GAGCACGACAAGCAGCAACT | 61.502 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2269 | 2288 | 0.694771 | TCCCTGCTGATGCTTTCACT | 59.305 | 50.000 | 0.00 | 0.00 | 40.48 | 3.41 |
2298 | 2317 | 0.755686 | CCTCATGAGCAGGGTACTCC | 59.244 | 60.000 | 17.76 | 0.00 | 32.98 | 3.85 |
2409 | 2428 | 3.673484 | CAGCCCGGCACCTTTGTG | 61.673 | 66.667 | 13.15 | 0.00 | 45.65 | 3.33 |
2769 | 2799 | 0.108615 | AGCGATGGAAACGACTCCTG | 60.109 | 55.000 | 8.63 | 1.59 | 36.35 | 3.86 |
2883 | 2917 | 2.390938 | CTGCATGTGCTGTTGAAGTTG | 58.609 | 47.619 | 6.55 | 0.00 | 42.66 | 3.16 |
2898 | 2932 | 0.320771 | GAGTTCACGGTCACCTGCAT | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 |
2908 | 2942 | 6.421377 | TGAAAATACATCATGAGTTCACGG | 57.579 | 37.500 | 0.09 | 0.00 | 0.00 | 4.94 |
2940 | 2974 | 3.958935 | CCTCAAGGACTTGCAGTTGCAG | 61.959 | 54.545 | 6.91 | 4.75 | 45.01 | 4.41 |
2941 | 2975 | 2.086832 | CCTCAAGGACTTGCAGTTGCA | 61.087 | 52.381 | 2.03 | 2.03 | 43.53 | 4.08 |
2942 | 2976 | 0.595095 | CCTCAAGGACTTGCAGTTGC | 59.405 | 55.000 | 7.18 | 0.00 | 40.24 | 4.17 |
2943 | 2977 | 1.972872 | ACCTCAAGGACTTGCAGTTG | 58.027 | 50.000 | 7.18 | 0.00 | 40.24 | 3.16 |
2944 | 2978 | 2.689983 | CAAACCTCAAGGACTTGCAGTT | 59.310 | 45.455 | 7.18 | 9.66 | 40.24 | 3.16 |
2945 | 2979 | 2.301346 | CAAACCTCAAGGACTTGCAGT | 58.699 | 47.619 | 7.18 | 4.43 | 40.24 | 4.40 |
2978 | 3012 | 4.869861 | ACATCAGTTTTTGGCTTTGTGTTC | 59.130 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
3013 | 3057 | 2.811431 | TGTTTCAATGCTACTTCCGGTG | 59.189 | 45.455 | 0.00 | 0.00 | 0.00 | 4.94 |
3043 | 3088 | 5.419155 | TCAGTACTCAAGGTGAAGTATCTGG | 59.581 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3060 | 3105 | 4.753233 | GTGCTGATGAGACATTCAGTACT | 58.247 | 43.478 | 12.08 | 0.00 | 46.03 | 2.73 |
3080 | 3125 | 8.511604 | AGGAAATCTTAGTCCATAAATGTGTG | 57.488 | 34.615 | 0.00 | 0.00 | 36.28 | 3.82 |
3090 | 3423 | 7.523415 | AGGTTTTTGTAGGAAATCTTAGTCCA | 58.477 | 34.615 | 0.00 | 0.00 | 36.28 | 4.02 |
3141 | 3474 | 2.038329 | ATGCAAGCTGGGGCACAT | 59.962 | 55.556 | 9.79 | 0.00 | 43.75 | 3.21 |
3341 | 3687 | 6.099413 | AGCAATGGAGAATGAGATAGTTGAGA | 59.901 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
3426 | 3772 | 2.548707 | GGCCGAGATCAGCAACATCATA | 60.549 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
3430 | 3776 | 0.035152 | TTGGCCGAGATCAGCAACAT | 60.035 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3590 | 3936 | 5.930837 | AATGAGAGACTCTACAAAGGGAG | 57.069 | 43.478 | 4.57 | 0.00 | 35.86 | 4.30 |
3753 | 4100 | 4.270325 | GGTTTGATCTAACAGCGGATACAC | 59.730 | 45.833 | 19.38 | 0.00 | 0.00 | 2.90 |
3760 | 4107 | 4.394795 | CGAAAAGGTTTGATCTAACAGCG | 58.605 | 43.478 | 19.38 | 11.60 | 0.00 | 5.18 |
3783 | 4133 | 3.957671 | AAGATGCACATCACGCAATAG | 57.042 | 42.857 | 12.87 | 0.00 | 43.84 | 1.73 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.