Multiple sequence alignment - TraesCS5B01G493100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G493100 | chr5B | 100.000 | 6488 | 0 | 0 | 1616 | 8103 | 661228177 | 661234664 | 0.000000e+00 | 11982.0 |
1 | TraesCS5B01G493100 | chr5B | 100.000 | 1210 | 0 | 0 | 1 | 1210 | 661226562 | 661227771 | 0.000000e+00 | 2235.0 |
2 | TraesCS5B01G493100 | chr5B | 94.000 | 100 | 4 | 2 | 3636 | 3735 | 476007924 | 476008021 | 5.070000e-32 | 150.0 |
3 | TraesCS5B01G493100 | chr5B | 92.000 | 75 | 3 | 1 | 5654 | 5725 | 479643540 | 479643614 | 1.440000e-17 | 102.0 |
4 | TraesCS5B01G493100 | chr5B | 91.667 | 72 | 6 | 0 | 5654 | 5725 | 661232286 | 661232215 | 5.170000e-17 | 100.0 |
5 | TraesCS5B01G493100 | chr5B | 89.610 | 77 | 3 | 3 | 5654 | 5726 | 479643614 | 479643539 | 8.660000e-15 | 93.5 |
6 | TraesCS5B01G493100 | chr5A | 95.636 | 3483 | 117 | 18 | 3732 | 7187 | 653295969 | 653299443 | 0.000000e+00 | 5557.0 |
7 | TraesCS5B01G493100 | chr5A | 97.654 | 1577 | 31 | 1 | 2075 | 3651 | 653294401 | 653295971 | 0.000000e+00 | 2702.0 |
8 | TraesCS5B01G493100 | chr5A | 95.541 | 471 | 9 | 1 | 1645 | 2103 | 653293878 | 653294348 | 0.000000e+00 | 743.0 |
9 | TraesCS5B01G493100 | chr5A | 91.786 | 487 | 21 | 7 | 7635 | 8103 | 653300267 | 653300752 | 0.000000e+00 | 660.0 |
10 | TraesCS5B01G493100 | chr5A | 89.827 | 462 | 27 | 8 | 7192 | 7637 | 653299610 | 653300067 | 7.050000e-160 | 575.0 |
11 | TraesCS5B01G493100 | chr5A | 100.000 | 29 | 0 | 0 | 2075 | 2103 | 653294347 | 653294375 | 4.000000e-03 | 54.7 |
12 | TraesCS5B01G493100 | chr5A | 100.000 | 29 | 0 | 0 | 2075 | 2103 | 653294374 | 653294402 | 4.000000e-03 | 54.7 |
13 | TraesCS5B01G493100 | chr5D | 96.802 | 2064 | 53 | 8 | 5724 | 7779 | 526133554 | 526135612 | 0.000000e+00 | 3434.0 |
14 | TraesCS5B01G493100 | chr5D | 97.638 | 1990 | 41 | 1 | 1662 | 3651 | 526129653 | 526131636 | 0.000000e+00 | 3410.0 |
15 | TraesCS5B01G493100 | chr5D | 95.361 | 1940 | 58 | 10 | 3732 | 5656 | 526131634 | 526133556 | 0.000000e+00 | 3055.0 |
16 | TraesCS5B01G493100 | chr5D | 95.810 | 358 | 12 | 3 | 750 | 1107 | 526128844 | 526129198 | 7.050000e-160 | 575.0 |
17 | TraesCS5B01G493100 | chr5D | 94.949 | 99 | 2 | 3 | 3637 | 3734 | 310766819 | 310766915 | 1.410000e-32 | 152.0 |
18 | TraesCS5B01G493100 | chr5D | 88.889 | 72 | 8 | 0 | 5654 | 5725 | 483574148 | 483574219 | 1.120000e-13 | 89.8 |
19 | TraesCS5B01G493100 | chr5D | 86.842 | 76 | 8 | 2 | 5653 | 5727 | 483574220 | 483574146 | 5.210000e-12 | 84.2 |
20 | TraesCS5B01G493100 | chr1A | 94.626 | 521 | 19 | 3 | 111 | 627 | 273515044 | 273514529 | 0.000000e+00 | 798.0 |
21 | TraesCS5B01G493100 | chr1A | 95.495 | 111 | 4 | 1 | 1 | 110 | 273515194 | 273515084 | 8.360000e-40 | 176.0 |
22 | TraesCS5B01G493100 | chr4A | 85.021 | 474 | 31 | 16 | 164 | 627 | 696052231 | 696051788 | 5.770000e-121 | 446.0 |
23 | TraesCS5B01G493100 | chr4A | 96.739 | 92 | 3 | 0 | 3650 | 3741 | 647219958 | 647219867 | 3.920000e-33 | 154.0 |
24 | TraesCS5B01G493100 | chr4A | 93.939 | 99 | 6 | 0 | 3650 | 3748 | 598723676 | 598723578 | 5.070000e-32 | 150.0 |
25 | TraesCS5B01G493100 | chr4A | 94.872 | 39 | 2 | 0 | 623 | 661 | 696051598 | 696051560 | 2.440000e-05 | 62.1 |
26 | TraesCS5B01G493100 | chr4D | 88.953 | 344 | 22 | 12 | 165 | 503 | 507693235 | 507692903 | 2.100000e-110 | 411.0 |
27 | TraesCS5B01G493100 | chr4D | 86.585 | 82 | 8 | 2 | 535 | 613 | 507692902 | 507692821 | 4.030000e-13 | 87.9 |
28 | TraesCS5B01G493100 | chr4D | 95.122 | 41 | 2 | 0 | 620 | 660 | 507692587 | 507692547 | 1.890000e-06 | 65.8 |
29 | TraesCS5B01G493100 | chr7B | 98.864 | 88 | 1 | 0 | 3647 | 3734 | 100745926 | 100745839 | 3.030000e-34 | 158.0 |
30 | TraesCS5B01G493100 | chr7B | 97.802 | 91 | 2 | 0 | 3646 | 3736 | 104073375 | 104073285 | 3.030000e-34 | 158.0 |
31 | TraesCS5B01G493100 | chr1D | 96.774 | 93 | 3 | 0 | 3650 | 3742 | 9228657 | 9228749 | 1.090000e-33 | 156.0 |
32 | TraesCS5B01G493100 | chr4B | 96.739 | 92 | 3 | 0 | 3650 | 3741 | 592354518 | 592354427 | 3.920000e-33 | 154.0 |
33 | TraesCS5B01G493100 | chr3B | 93.878 | 98 | 6 | 0 | 3637 | 3734 | 782116031 | 782115934 | 1.820000e-31 | 148.0 |
34 | TraesCS5B01G493100 | chr2A | 86.139 | 101 | 12 | 2 | 7524 | 7624 | 88666433 | 88666335 | 3.090000e-19 | 108.0 |
35 | TraesCS5B01G493100 | chr3D | 89.744 | 78 | 4 | 2 | 5653 | 5726 | 457058549 | 457058472 | 6.690000e-16 | 97.1 |
36 | TraesCS5B01G493100 | chr3D | 88.312 | 77 | 3 | 4 | 5654 | 5725 | 457058473 | 457058548 | 4.030000e-13 | 87.9 |
37 | TraesCS5B01G493100 | chr3D | 96.970 | 33 | 1 | 0 | 7974 | 8006 | 594752561 | 594752529 | 1.000000e-03 | 56.5 |
38 | TraesCS5B01G493100 | chr2D | 90.278 | 72 | 5 | 1 | 5653 | 5724 | 449070821 | 449070752 | 8.660000e-15 | 93.5 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G493100 | chr5B | 661226562 | 661234664 | 8102 | False | 7108.500000 | 11982 | 100.000000 | 1 | 8103 | 2 | chr5B.!!$F3 | 8102 |
1 | TraesCS5B01G493100 | chr5A | 653293878 | 653300752 | 6874 | False | 1478.057143 | 5557 | 95.777714 | 1645 | 8103 | 7 | chr5A.!!$F1 | 6458 |
2 | TraesCS5B01G493100 | chr5D | 526128844 | 526135612 | 6768 | False | 2618.500000 | 3434 | 96.402750 | 750 | 7779 | 4 | chr5D.!!$F3 | 7029 |
3 | TraesCS5B01G493100 | chr1A | 273514529 | 273515194 | 665 | True | 487.000000 | 798 | 95.060500 | 1 | 627 | 2 | chr1A.!!$R1 | 626 |
4 | TraesCS5B01G493100 | chr4A | 696051560 | 696052231 | 671 | True | 254.050000 | 446 | 89.946500 | 164 | 661 | 2 | chr4A.!!$R3 | 497 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
732 | 976 | 0.035725 | TCAGTTAGTCGCTCTCCGGA | 60.036 | 55.0 | 2.93 | 2.93 | 37.59 | 5.14 | F |
733 | 977 | 0.099082 | CAGTTAGTCGCTCTCCGGAC | 59.901 | 60.0 | 0.00 | 0.00 | 37.59 | 4.79 | F |
1132 | 1376 | 0.119155 | TTCCTCCTCCACATCCACCT | 59.881 | 55.0 | 0.00 | 0.00 | 0.00 | 4.00 | F |
1133 | 1377 | 0.325671 | TCCTCCTCCACATCCACCTC | 60.326 | 60.0 | 0.00 | 0.00 | 0.00 | 3.85 | F |
1159 | 1403 | 0.547712 | CTTGTCCCTCCCTTCCCTCA | 60.548 | 60.0 | 0.00 | 0.00 | 0.00 | 3.86 | F |
1169 | 1413 | 0.689412 | CCTTCCCTCACCCTCCTCTC | 60.689 | 65.0 | 0.00 | 0.00 | 0.00 | 3.20 | F |
2580 | 2917 | 0.892814 | GGCTGCTGTGAGGAAAGCTT | 60.893 | 55.0 | 0.00 | 0.00 | 40.21 | 3.74 | F |
3495 | 3832 | 0.322648 | TGTCATGGACTGCTGGACTG | 59.677 | 55.0 | 0.00 | 0.00 | 33.15 | 3.51 | F |
4893 | 5240 | 0.991355 | TGGCCACCCTCCGGAATAAT | 60.991 | 55.0 | 5.23 | 0.00 | 0.00 | 1.28 | F |
5672 | 6027 | 0.042131 | TACTCCCTCCGTCCCACAAT | 59.958 | 55.0 | 0.00 | 0.00 | 0.00 | 2.71 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2229 | 2566 | 0.848735 | ATGGCCACCAGATATGCAGT | 59.151 | 50.000 | 8.16 | 0.00 | 36.75 | 4.40 | R |
2510 | 2847 | 0.995024 | CTCCAAGACCCATGTTCCCT | 59.005 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 | R |
2660 | 2997 | 1.339610 | GTGACTAGCGGATCAGAGCAT | 59.660 | 52.381 | 0.00 | 0.00 | 35.48 | 3.79 | R |
2992 | 3329 | 3.251972 | CAGTGGTCTCAGCTTTTTCTTCC | 59.748 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 | R |
3442 | 3779 | 5.182001 | GCAAGACTCCACTGTAACATGAAAT | 59.818 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 | R |
3495 | 3832 | 0.947244 | CAGAACACAGTTGCCAGACC | 59.053 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 | R |
4180 | 4518 | 1.134580 | GTAGCAGAGCAAGGATGAGCA | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 | R |
5581 | 5936 | 2.352030 | CGTTTGCCTCCGTACTACTTCA | 60.352 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 | R |
6556 | 6931 | 0.689412 | TCCCGCCATCTACACCATCA | 60.689 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 | R |
7155 | 7530 | 1.530720 | TCTACGTGTGCATGCAACAAG | 59.469 | 47.619 | 24.58 | 23.87 | 0.00 | 3.16 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
29 | 30 | 2.973419 | TGTTCCGCCAACGTTAATTC | 57.027 | 45.000 | 0.00 | 0.00 | 37.90 | 2.17 |
44 | 46 | 8.499162 | CAACGTTAATTCTTCTGACTTCAAGAT | 58.501 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
116 | 157 | 1.831286 | CCCTACAGCCCCGATACGT | 60.831 | 63.158 | 0.00 | 0.00 | 0.00 | 3.57 |
122 | 163 | 1.228490 | AGCCCCGATACGTCCCTAG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
139 | 180 | 3.891049 | CCTAGGGGGACTGAGAATTTTG | 58.109 | 50.000 | 0.00 | 0.00 | 37.23 | 2.44 |
149 | 190 | 5.760743 | GGACTGAGAATTTTGCTATCCCTAC | 59.239 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
169 | 210 | 1.812571 | CCAAGTGATGCTGTAACCACC | 59.187 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
410 | 454 | 9.905713 | TCCTAGCATATTAGAACACATTTTCTT | 57.094 | 29.630 | 0.00 | 0.00 | 37.09 | 2.52 |
512 | 557 | 1.339929 | GAAAAATGGACAACCGTGGCT | 59.660 | 47.619 | 0.00 | 0.00 | 39.42 | 4.75 |
589 | 634 | 2.488204 | TGGCAAGATGTGATTTCCGA | 57.512 | 45.000 | 0.00 | 0.00 | 0.00 | 4.55 |
591 | 636 | 2.487762 | TGGCAAGATGTGATTTCCGAAC | 59.512 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
594 | 639 | 4.545610 | GCAAGATGTGATTTCCGAACAAA | 58.454 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
595 | 640 | 5.163513 | GCAAGATGTGATTTCCGAACAAAT | 58.836 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
597 | 642 | 6.251376 | GCAAGATGTGATTTCCGAACAAATAC | 59.749 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
598 | 643 | 6.436843 | AGATGTGATTTCCGAACAAATACC | 57.563 | 37.500 | 0.00 | 0.00 | 0.00 | 2.73 |
601 | 646 | 4.216687 | TGTGATTTCCGAACAAATACCACC | 59.783 | 41.667 | 0.00 | 0.00 | 0.00 | 4.61 |
602 | 647 | 4.216687 | GTGATTTCCGAACAAATACCACCA | 59.783 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
605 | 655 | 5.379732 | TTTCCGAACAAATACCACCATTC | 57.620 | 39.130 | 0.00 | 0.00 | 0.00 | 2.67 |
618 | 668 | 2.231964 | CCACCATTCTTGTGTGGGAATG | 59.768 | 50.000 | 8.23 | 8.23 | 44.64 | 2.67 |
621 | 671 | 3.573967 | ACCATTCTTGTGTGGGAATGAAC | 59.426 | 43.478 | 14.67 | 0.00 | 46.70 | 3.18 |
626 | 870 | 4.894784 | TCTTGTGTGGGAATGAACTAGAC | 58.105 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
631 | 875 | 0.539986 | GGGAATGAACTAGACGGGCA | 59.460 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
661 | 905 | 2.971915 | CGCGCCTTTAACGATCTAGTAG | 59.028 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
662 | 906 | 3.306818 | GCGCCTTTAACGATCTAGTAGG | 58.693 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
663 | 907 | 3.856267 | GCGCCTTTAACGATCTAGTAGGG | 60.856 | 52.174 | 0.00 | 0.00 | 0.00 | 3.53 |
664 | 908 | 3.567164 | CGCCTTTAACGATCTAGTAGGGA | 59.433 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
665 | 909 | 4.217983 | CGCCTTTAACGATCTAGTAGGGAT | 59.782 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
666 | 910 | 5.471257 | GCCTTTAACGATCTAGTAGGGATG | 58.529 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
667 | 911 | 5.243283 | GCCTTTAACGATCTAGTAGGGATGA | 59.757 | 44.000 | 0.00 | 0.00 | 0.00 | 2.92 |
668 | 912 | 6.239232 | GCCTTTAACGATCTAGTAGGGATGAA | 60.239 | 42.308 | 0.00 | 0.00 | 0.00 | 2.57 |
669 | 913 | 7.686127 | GCCTTTAACGATCTAGTAGGGATGAAA | 60.686 | 40.741 | 0.00 | 0.00 | 0.00 | 2.69 |
670 | 914 | 8.202137 | CCTTTAACGATCTAGTAGGGATGAAAA | 58.798 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
671 | 915 | 8.937634 | TTTAACGATCTAGTAGGGATGAAAAC | 57.062 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
672 | 916 | 6.793505 | AACGATCTAGTAGGGATGAAAACT | 57.206 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
673 | 917 | 6.793505 | ACGATCTAGTAGGGATGAAAACTT | 57.206 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
674 | 918 | 7.893124 | ACGATCTAGTAGGGATGAAAACTTA | 57.107 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
675 | 919 | 8.480133 | ACGATCTAGTAGGGATGAAAACTTAT | 57.520 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
676 | 920 | 8.578151 | ACGATCTAGTAGGGATGAAAACTTATC | 58.422 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
677 | 921 | 7.751348 | CGATCTAGTAGGGATGAAAACTTATCG | 59.249 | 40.741 | 0.00 | 0.00 | 0.00 | 2.92 |
678 | 922 | 6.746120 | TCTAGTAGGGATGAAAACTTATCGC | 58.254 | 40.000 | 0.00 | 0.00 | 36.75 | 4.58 |
679 | 923 | 5.353394 | AGTAGGGATGAAAACTTATCGCA | 57.647 | 39.130 | 0.00 | 0.00 | 38.34 | 5.10 |
680 | 924 | 5.116882 | AGTAGGGATGAAAACTTATCGCAC | 58.883 | 41.667 | 0.00 | 0.00 | 38.34 | 5.34 |
681 | 925 | 4.222124 | AGGGATGAAAACTTATCGCACT | 57.778 | 40.909 | 0.00 | 0.00 | 38.34 | 4.40 |
682 | 926 | 5.353394 | AGGGATGAAAACTTATCGCACTA | 57.647 | 39.130 | 0.00 | 0.00 | 38.34 | 2.74 |
683 | 927 | 5.360591 | AGGGATGAAAACTTATCGCACTAG | 58.639 | 41.667 | 0.00 | 0.00 | 38.34 | 2.57 |
684 | 928 | 5.104900 | AGGGATGAAAACTTATCGCACTAGT | 60.105 | 40.000 | 0.00 | 0.00 | 38.34 | 2.57 |
685 | 929 | 5.585047 | GGGATGAAAACTTATCGCACTAGTT | 59.415 | 40.000 | 0.00 | 0.00 | 36.57 | 2.24 |
686 | 930 | 6.456988 | GGGATGAAAACTTATCGCACTAGTTG | 60.457 | 42.308 | 0.00 | 0.00 | 36.57 | 3.16 |
700 | 944 | 4.950926 | CACTAGTTGCTTGTTCGAAGATG | 58.049 | 43.478 | 0.00 | 0.08 | 35.04 | 2.90 |
701 | 945 | 4.686091 | CACTAGTTGCTTGTTCGAAGATGA | 59.314 | 41.667 | 11.75 | 0.00 | 35.04 | 2.92 |
702 | 946 | 4.926238 | ACTAGTTGCTTGTTCGAAGATGAG | 59.074 | 41.667 | 11.75 | 1.35 | 35.04 | 2.90 |
703 | 947 | 3.070018 | AGTTGCTTGTTCGAAGATGAGG | 58.930 | 45.455 | 11.75 | 0.00 | 35.04 | 3.86 |
704 | 948 | 2.808543 | GTTGCTTGTTCGAAGATGAGGT | 59.191 | 45.455 | 11.75 | 0.00 | 35.04 | 3.85 |
705 | 949 | 3.126001 | TGCTTGTTCGAAGATGAGGTT | 57.874 | 42.857 | 11.75 | 0.00 | 35.04 | 3.50 |
706 | 950 | 2.807967 | TGCTTGTTCGAAGATGAGGTTG | 59.192 | 45.455 | 11.75 | 0.00 | 35.04 | 3.77 |
707 | 951 | 2.808543 | GCTTGTTCGAAGATGAGGTTGT | 59.191 | 45.455 | 11.75 | 0.00 | 35.04 | 3.32 |
708 | 952 | 3.364366 | GCTTGTTCGAAGATGAGGTTGTG | 60.364 | 47.826 | 11.75 | 0.00 | 35.04 | 3.33 |
709 | 953 | 2.143122 | TGTTCGAAGATGAGGTTGTGC | 58.857 | 47.619 | 0.00 | 0.00 | 35.04 | 4.57 |
710 | 954 | 2.224281 | TGTTCGAAGATGAGGTTGTGCT | 60.224 | 45.455 | 0.00 | 0.00 | 35.04 | 4.40 |
711 | 955 | 2.370281 | TCGAAGATGAGGTTGTGCTC | 57.630 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
712 | 956 | 1.066858 | TCGAAGATGAGGTTGTGCTCC | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
713 | 957 | 1.066573 | CGAAGATGAGGTTGTGCTCCT | 60.067 | 52.381 | 0.00 | 0.00 | 38.09 | 3.69 |
721 | 965 | 2.330216 | AGGTTGTGCTCCTCAGTTAGT | 58.670 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
722 | 966 | 2.300437 | AGGTTGTGCTCCTCAGTTAGTC | 59.700 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
723 | 967 | 2.329379 | GTTGTGCTCCTCAGTTAGTCG | 58.671 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
724 | 968 | 0.243907 | TGTGCTCCTCAGTTAGTCGC | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
725 | 969 | 0.528470 | GTGCTCCTCAGTTAGTCGCT | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
726 | 970 | 0.811915 | TGCTCCTCAGTTAGTCGCTC | 59.188 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
727 | 971 | 1.099689 | GCTCCTCAGTTAGTCGCTCT | 58.900 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
728 | 972 | 1.064952 | GCTCCTCAGTTAGTCGCTCTC | 59.935 | 57.143 | 0.00 | 0.00 | 0.00 | 3.20 |
729 | 973 | 1.673920 | CTCCTCAGTTAGTCGCTCTCC | 59.326 | 57.143 | 0.00 | 0.00 | 0.00 | 3.71 |
730 | 974 | 0.378962 | CCTCAGTTAGTCGCTCTCCG | 59.621 | 60.000 | 0.00 | 0.00 | 38.61 | 4.63 |
731 | 975 | 0.378962 | CTCAGTTAGTCGCTCTCCGG | 59.621 | 60.000 | 0.00 | 0.00 | 37.59 | 5.14 |
732 | 976 | 0.035725 | TCAGTTAGTCGCTCTCCGGA | 60.036 | 55.000 | 2.93 | 2.93 | 37.59 | 5.14 |
733 | 977 | 0.099082 | CAGTTAGTCGCTCTCCGGAC | 59.901 | 60.000 | 0.00 | 0.00 | 37.59 | 4.79 |
734 | 978 | 1.031029 | AGTTAGTCGCTCTCCGGACC | 61.031 | 60.000 | 0.00 | 0.00 | 37.59 | 4.46 |
735 | 979 | 2.110967 | TTAGTCGCTCTCCGGACCG | 61.111 | 63.158 | 6.99 | 6.99 | 37.59 | 4.79 |
745 | 989 | 3.391382 | CCGGACCGGCTCTTCCTT | 61.391 | 66.667 | 22.37 | 0.00 | 41.17 | 3.36 |
746 | 990 | 2.184579 | CGGACCGGCTCTTCCTTC | 59.815 | 66.667 | 5.81 | 0.00 | 0.00 | 3.46 |
747 | 991 | 2.585153 | GGACCGGCTCTTCCTTCC | 59.415 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
748 | 992 | 2.291043 | GGACCGGCTCTTCCTTCCA | 61.291 | 63.158 | 0.00 | 0.00 | 35.66 | 3.53 |
766 | 1010 | 8.893563 | TCCTTCCATTCCATTTAGTAAACATT | 57.106 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
783 | 1027 | 0.479815 | ATTCCATGATGGGCCGTGAT | 59.520 | 50.000 | 12.26 | 0.00 | 38.32 | 3.06 |
807 | 1051 | 1.555992 | ACCGGACCGTTTATCATTGGA | 59.444 | 47.619 | 9.46 | 0.00 | 0.00 | 3.53 |
815 | 1059 | 0.253610 | TTTATCATTGGACGGGCCGT | 59.746 | 50.000 | 34.81 | 34.81 | 45.10 | 5.68 |
816 | 1060 | 0.462937 | TTATCATTGGACGGGCCGTG | 60.463 | 55.000 | 39.41 | 22.05 | 41.37 | 4.94 |
860 | 1104 | 0.750546 | CCGGACCACCTACGATCTGA | 60.751 | 60.000 | 0.00 | 0.00 | 0.00 | 3.27 |
905 | 1149 | 1.875963 | CGAAGGAACGCAGCCAAAT | 59.124 | 52.632 | 0.00 | 0.00 | 0.00 | 2.32 |
946 | 1190 | 0.480252 | CCCTCCCAATTCCCATCTCC | 59.520 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1121 | 1365 | 4.214327 | CCGCGCCTCTTCCTCCTC | 62.214 | 72.222 | 0.00 | 0.00 | 0.00 | 3.71 |
1122 | 1366 | 4.214327 | CGCGCCTCTTCCTCCTCC | 62.214 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
1123 | 1367 | 3.077556 | GCGCCTCTTCCTCCTCCA | 61.078 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1124 | 1368 | 2.896443 | CGCCTCTTCCTCCTCCAC | 59.104 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
1125 | 1369 | 1.984570 | CGCCTCTTCCTCCTCCACA | 60.985 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
1126 | 1370 | 1.333636 | CGCCTCTTCCTCCTCCACAT | 61.334 | 60.000 | 0.00 | 0.00 | 0.00 | 3.21 |
1127 | 1371 | 0.467804 | GCCTCTTCCTCCTCCACATC | 59.532 | 60.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1128 | 1372 | 1.127343 | CCTCTTCCTCCTCCACATCC | 58.873 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1129 | 1373 | 1.623557 | CCTCTTCCTCCTCCACATCCA | 60.624 | 57.143 | 0.00 | 0.00 | 0.00 | 3.41 |
1130 | 1374 | 1.484240 | CTCTTCCTCCTCCACATCCAC | 59.516 | 57.143 | 0.00 | 0.00 | 0.00 | 4.02 |
1131 | 1375 | 0.543749 | CTTCCTCCTCCACATCCACC | 59.456 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
1132 | 1376 | 0.119155 | TTCCTCCTCCACATCCACCT | 59.881 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1133 | 1377 | 0.325671 | TCCTCCTCCACATCCACCTC | 60.326 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1134 | 1378 | 1.341156 | CCTCCTCCACATCCACCTCC | 61.341 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1135 | 1379 | 1.306997 | TCCTCCACATCCACCTCCC | 60.307 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
1136 | 1380 | 2.378634 | CCTCCACATCCACCTCCCC | 61.379 | 68.421 | 0.00 | 0.00 | 0.00 | 4.81 |
1137 | 1381 | 2.687200 | TCCACATCCACCTCCCCG | 60.687 | 66.667 | 0.00 | 0.00 | 0.00 | 5.73 |
1138 | 1382 | 4.489771 | CCACATCCACCTCCCCGC | 62.490 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
1139 | 1383 | 4.489771 | CACATCCACCTCCCCGCC | 62.490 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
1142 | 1386 | 4.760220 | ATCCACCTCCCCGCCCTT | 62.760 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
1145 | 1389 | 4.410400 | CACCTCCCCGCCCTTGTC | 62.410 | 72.222 | 0.00 | 0.00 | 0.00 | 3.18 |
1153 | 1397 | 3.330720 | CGCCCTTGTCCCTCCCTT | 61.331 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
1154 | 1398 | 2.677848 | GCCCTTGTCCCTCCCTTC | 59.322 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
1155 | 1399 | 2.985116 | GCCCTTGTCCCTCCCTTCC | 61.985 | 68.421 | 0.00 | 0.00 | 0.00 | 3.46 |
1156 | 1400 | 2.309504 | CCCTTGTCCCTCCCTTCCC | 61.310 | 68.421 | 0.00 | 0.00 | 0.00 | 3.97 |
1157 | 1401 | 1.229984 | CCTTGTCCCTCCCTTCCCT | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 4.20 |
1158 | 1402 | 1.275421 | CCTTGTCCCTCCCTTCCCTC | 61.275 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1159 | 1403 | 0.547712 | CTTGTCCCTCCCTTCCCTCA | 60.548 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1160 | 1404 | 0.840722 | TTGTCCCTCCCTTCCCTCAC | 60.841 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1161 | 1405 | 1.996187 | GTCCCTCCCTTCCCTCACC | 60.996 | 68.421 | 0.00 | 0.00 | 0.00 | 4.02 |
1162 | 1406 | 2.692741 | CCCTCCCTTCCCTCACCC | 60.693 | 72.222 | 0.00 | 0.00 | 0.00 | 4.61 |
1163 | 1407 | 2.456840 | CCTCCCTTCCCTCACCCT | 59.543 | 66.667 | 0.00 | 0.00 | 0.00 | 4.34 |
1164 | 1408 | 1.690985 | CCTCCCTTCCCTCACCCTC | 60.691 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1165 | 1409 | 1.690985 | CTCCCTTCCCTCACCCTCC | 60.691 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1166 | 1410 | 2.184631 | TCCCTTCCCTCACCCTCCT | 61.185 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
1167 | 1411 | 1.690985 | CCCTTCCCTCACCCTCCTC | 60.691 | 68.421 | 0.00 | 0.00 | 0.00 | 3.71 |
1168 | 1412 | 1.394151 | CCTTCCCTCACCCTCCTCT | 59.606 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
1169 | 1413 | 0.689412 | CCTTCCCTCACCCTCCTCTC | 60.689 | 65.000 | 0.00 | 0.00 | 0.00 | 3.20 |
1170 | 1414 | 0.689412 | CTTCCCTCACCCTCCTCTCC | 60.689 | 65.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1171 | 1415 | 1.156322 | TTCCCTCACCCTCCTCTCCT | 61.156 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1172 | 1416 | 1.075600 | CCCTCACCCTCCTCTCCTC | 60.076 | 68.421 | 0.00 | 0.00 | 0.00 | 3.71 |
1173 | 1417 | 1.075600 | CCTCACCCTCCTCTCCTCC | 60.076 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1174 | 1418 | 1.075600 | CTCACCCTCCTCTCCTCCC | 60.076 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1175 | 1419 | 2.041405 | CACCCTCCTCTCCTCCCC | 60.041 | 72.222 | 0.00 | 0.00 | 0.00 | 4.81 |
1176 | 1420 | 3.756783 | ACCCTCCTCTCCTCCCCG | 61.757 | 72.222 | 0.00 | 0.00 | 0.00 | 5.73 |
1177 | 1421 | 4.548513 | CCCTCCTCTCCTCCCCGG | 62.549 | 77.778 | 0.00 | 0.00 | 0.00 | 5.73 |
1205 | 1449 | 4.806339 | CTCCCTCTTCCCCCGCCT | 62.806 | 72.222 | 0.00 | 0.00 | 0.00 | 5.52 |
1206 | 1450 | 4.798682 | TCCCTCTTCCCCCGCCTC | 62.799 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
1632 | 1876 | 2.443016 | ACCTCCGCCTCCTGCTAG | 60.443 | 66.667 | 0.00 | 0.00 | 38.05 | 3.42 |
1633 | 1877 | 3.922640 | CCTCCGCCTCCTGCTAGC | 61.923 | 72.222 | 8.10 | 8.10 | 38.05 | 3.42 |
1634 | 1878 | 3.922640 | CTCCGCCTCCTGCTAGCC | 61.923 | 72.222 | 13.29 | 0.00 | 38.05 | 3.93 |
2229 | 2566 | 1.149101 | ACTTCAAAGGGAGGGCTTCA | 58.851 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2399 | 2736 | 1.134220 | GTGTTGGTGGAGAGGTGTTCA | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
2402 | 2739 | 1.048601 | TGGTGGAGAGGTGTTCAGAC | 58.951 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2414 | 2751 | 3.596066 | TTCAGACAGCGCTGGAGCC | 62.596 | 63.158 | 38.27 | 23.87 | 37.91 | 4.70 |
2490 | 2827 | 2.722487 | GCGTGGAGGTCGATCGAT | 59.278 | 61.111 | 22.50 | 5.91 | 0.00 | 3.59 |
2510 | 2847 | 4.502087 | CGATTGCAGGAGGTGATGAAGATA | 60.502 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
2567 | 2904 | 2.621998 | GTGCATTGATGATAAGGCTGCT | 59.378 | 45.455 | 0.00 | 0.00 | 38.12 | 4.24 |
2570 | 2907 | 3.550233 | GCATTGATGATAAGGCTGCTGTG | 60.550 | 47.826 | 0.00 | 0.00 | 34.75 | 3.66 |
2580 | 2917 | 0.892814 | GGCTGCTGTGAGGAAAGCTT | 60.893 | 55.000 | 0.00 | 0.00 | 40.21 | 3.74 |
2660 | 2997 | 2.438074 | TTACTGCAATGGGGGCTGCA | 62.438 | 55.000 | 0.50 | 0.00 | 46.01 | 4.41 |
2992 | 3329 | 1.952296 | GATATGTGCAAGCCTTGGGAG | 59.048 | 52.381 | 6.57 | 0.00 | 0.00 | 4.30 |
3222 | 3559 | 2.159327 | CCAAGAAGGCAAAGGCAAAG | 57.841 | 50.000 | 0.00 | 0.00 | 43.71 | 2.77 |
3223 | 3560 | 1.270465 | CCAAGAAGGCAAAGGCAAAGG | 60.270 | 52.381 | 0.00 | 0.00 | 43.71 | 3.11 |
3442 | 3779 | 8.367911 | CAATATCTACTCTGGTGCCAATAAGTA | 58.632 | 37.037 | 0.00 | 1.02 | 0.00 | 2.24 |
3495 | 3832 | 0.322648 | TGTCATGGACTGCTGGACTG | 59.677 | 55.000 | 0.00 | 0.00 | 33.15 | 3.51 |
3591 | 3928 | 5.080969 | TCCTGTTACATTGTACACTAGCC | 57.919 | 43.478 | 0.00 | 0.00 | 0.00 | 3.93 |
3661 | 3998 | 9.640963 | ATTGTAAACTATTGTACTCACTCTGTC | 57.359 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
3662 | 3999 | 7.600065 | TGTAAACTATTGTACTCACTCTGTCC | 58.400 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
3663 | 4000 | 5.662674 | AACTATTGTACTCACTCTGTCCC | 57.337 | 43.478 | 0.00 | 0.00 | 0.00 | 4.46 |
3664 | 4001 | 4.673968 | ACTATTGTACTCACTCTGTCCCA | 58.326 | 43.478 | 0.00 | 0.00 | 0.00 | 4.37 |
3665 | 4002 | 4.707448 | ACTATTGTACTCACTCTGTCCCAG | 59.293 | 45.833 | 0.00 | 0.00 | 0.00 | 4.45 |
3666 | 4003 | 2.971901 | TGTACTCACTCTGTCCCAGA | 57.028 | 50.000 | 0.00 | 0.00 | 38.25 | 3.86 |
3667 | 4004 | 3.238788 | TGTACTCACTCTGTCCCAGAA | 57.761 | 47.619 | 0.00 | 0.00 | 40.18 | 3.02 |
3668 | 4005 | 3.779444 | TGTACTCACTCTGTCCCAGAAT | 58.221 | 45.455 | 0.00 | 0.00 | 40.18 | 2.40 |
3669 | 4006 | 4.930696 | TGTACTCACTCTGTCCCAGAATA | 58.069 | 43.478 | 0.00 | 0.00 | 40.18 | 1.75 |
3670 | 4007 | 5.519808 | TGTACTCACTCTGTCCCAGAATAT | 58.480 | 41.667 | 0.00 | 0.00 | 40.18 | 1.28 |
3671 | 4008 | 6.669631 | TGTACTCACTCTGTCCCAGAATATA | 58.330 | 40.000 | 0.00 | 0.00 | 40.18 | 0.86 |
3672 | 4009 | 7.123383 | TGTACTCACTCTGTCCCAGAATATAA | 58.877 | 38.462 | 0.00 | 0.00 | 40.18 | 0.98 |
3673 | 4010 | 6.723298 | ACTCACTCTGTCCCAGAATATAAG | 57.277 | 41.667 | 0.00 | 0.00 | 40.18 | 1.73 |
3674 | 4011 | 6.436027 | ACTCACTCTGTCCCAGAATATAAGA | 58.564 | 40.000 | 0.00 | 0.00 | 40.18 | 2.10 |
3675 | 4012 | 6.897966 | ACTCACTCTGTCCCAGAATATAAGAA | 59.102 | 38.462 | 0.00 | 0.00 | 40.18 | 2.52 |
3676 | 4013 | 7.113658 | TCACTCTGTCCCAGAATATAAGAAC | 57.886 | 40.000 | 0.00 | 0.00 | 40.18 | 3.01 |
3677 | 4014 | 5.980116 | CACTCTGTCCCAGAATATAAGAACG | 59.020 | 44.000 | 0.00 | 0.00 | 40.18 | 3.95 |
3678 | 4015 | 5.657302 | ACTCTGTCCCAGAATATAAGAACGT | 59.343 | 40.000 | 0.00 | 0.00 | 40.18 | 3.99 |
3679 | 4016 | 6.154706 | ACTCTGTCCCAGAATATAAGAACGTT | 59.845 | 38.462 | 0.00 | 0.00 | 40.18 | 3.99 |
3680 | 4017 | 6.942976 | TCTGTCCCAGAATATAAGAACGTTT | 58.057 | 36.000 | 0.46 | 0.00 | 37.57 | 3.60 |
3681 | 4018 | 7.391620 | TCTGTCCCAGAATATAAGAACGTTTT | 58.608 | 34.615 | 0.46 | 0.00 | 37.57 | 2.43 |
3682 | 4019 | 7.881232 | TCTGTCCCAGAATATAAGAACGTTTTT | 59.119 | 33.333 | 9.22 | 9.22 | 37.57 | 1.94 |
3683 | 4020 | 7.812648 | TGTCCCAGAATATAAGAACGTTTTTG | 58.187 | 34.615 | 13.87 | 0.00 | 0.00 | 2.44 |
3684 | 4021 | 7.662258 | TGTCCCAGAATATAAGAACGTTTTTGA | 59.338 | 33.333 | 13.87 | 2.81 | 0.00 | 2.69 |
3685 | 4022 | 7.961283 | GTCCCAGAATATAAGAACGTTTTTGAC | 59.039 | 37.037 | 13.87 | 5.89 | 0.00 | 3.18 |
3686 | 4023 | 7.662258 | TCCCAGAATATAAGAACGTTTTTGACA | 59.338 | 33.333 | 13.87 | 0.01 | 0.00 | 3.58 |
3687 | 4024 | 7.749126 | CCCAGAATATAAGAACGTTTTTGACAC | 59.251 | 37.037 | 13.87 | 2.84 | 0.00 | 3.67 |
3688 | 4025 | 8.504005 | CCAGAATATAAGAACGTTTTTGACACT | 58.496 | 33.333 | 13.87 | 4.79 | 0.00 | 3.55 |
3692 | 4029 | 9.769093 | AATATAAGAACGTTTTTGACACTATGC | 57.231 | 29.630 | 13.87 | 0.00 | 0.00 | 3.14 |
3693 | 4030 | 5.751243 | AAGAACGTTTTTGACACTATGCT | 57.249 | 34.783 | 0.46 | 0.00 | 0.00 | 3.79 |
3694 | 4031 | 6.854496 | AAGAACGTTTTTGACACTATGCTA | 57.146 | 33.333 | 0.46 | 0.00 | 0.00 | 3.49 |
3695 | 4032 | 6.467723 | AGAACGTTTTTGACACTATGCTAG | 57.532 | 37.500 | 0.46 | 0.00 | 0.00 | 3.42 |
3696 | 4033 | 5.989777 | AGAACGTTTTTGACACTATGCTAGT | 59.010 | 36.000 | 0.46 | 0.00 | 40.28 | 2.57 |
3710 | 4047 | 7.958053 | ACTATGCTAGTGTTAAAAACGTTCT | 57.042 | 32.000 | 0.00 | 0.00 | 37.69 | 3.01 |
3711 | 4048 | 8.374327 | ACTATGCTAGTGTTAAAAACGTTCTT | 57.626 | 30.769 | 0.00 | 0.00 | 37.69 | 2.52 |
3712 | 4049 | 9.480053 | ACTATGCTAGTGTTAAAAACGTTCTTA | 57.520 | 29.630 | 0.00 | 0.00 | 37.69 | 2.10 |
3724 | 4061 | 9.609950 | TTAAAAACGTTCTTATATTTTGGGACG | 57.390 | 29.630 | 0.00 | 0.00 | 0.00 | 4.79 |
3725 | 4062 | 5.806366 | AACGTTCTTATATTTTGGGACGG | 57.194 | 39.130 | 0.00 | 0.00 | 0.00 | 4.79 |
3726 | 4063 | 5.088680 | ACGTTCTTATATTTTGGGACGGA | 57.911 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
3727 | 4064 | 5.114081 | ACGTTCTTATATTTTGGGACGGAG | 58.886 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
3728 | 4065 | 4.510340 | CGTTCTTATATTTTGGGACGGAGG | 59.490 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3729 | 4066 | 4.699925 | TCTTATATTTTGGGACGGAGGG | 57.300 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
3730 | 4067 | 4.300345 | TCTTATATTTTGGGACGGAGGGA | 58.700 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
3731 | 4068 | 4.347000 | TCTTATATTTTGGGACGGAGGGAG | 59.653 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3732 | 4069 | 1.961133 | TATTTTGGGACGGAGGGAGT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3733 | 4070 | 1.961133 | ATTTTGGGACGGAGGGAGTA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3797 | 4134 | 6.614694 | TTTAATAGGCAGAACTGTAGACCA | 57.385 | 37.500 | 3.77 | 0.00 | 0.00 | 4.02 |
3898 | 4235 | 2.832129 | AGCTTAGCTGTAGCAACTACCA | 59.168 | 45.455 | 20.52 | 0.00 | 45.16 | 3.25 |
3945 | 4282 | 1.133606 | CCACCAGTTACAGGTTTGGGT | 60.134 | 52.381 | 0.00 | 0.00 | 37.23 | 4.51 |
3949 | 4286 | 1.877443 | CAGTTACAGGTTTGGGTTCGG | 59.123 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
3970 | 4307 | 9.155975 | GTTCGGATCATAAGATAATGCAGTATT | 57.844 | 33.333 | 8.26 | 0.00 | 33.72 | 1.89 |
3999 | 4337 | 7.855409 | TGCGTTGCTTTGATATTTGTCATATAC | 59.145 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
4893 | 5240 | 0.991355 | TGGCCACCCTCCGGAATAAT | 60.991 | 55.000 | 5.23 | 0.00 | 0.00 | 1.28 |
4970 | 5317 | 6.100279 | TGGTGAGCTTATATCTCTGAATGGTT | 59.900 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
5196 | 5549 | 3.881089 | CAGTGCTTGATCCAATATGAGCA | 59.119 | 43.478 | 0.00 | 0.00 | 37.76 | 4.26 |
5326 | 5679 | 4.470462 | GCTATTGCTGGCAATTAAGATCG | 58.530 | 43.478 | 22.96 | 7.36 | 43.32 | 3.69 |
5385 | 5738 | 7.864379 | CAGCAGTTCTTTTGATTCTGTACATTT | 59.136 | 33.333 | 0.00 | 0.00 | 35.11 | 2.32 |
5389 | 5742 | 9.736023 | AGTTCTTTTGATTCTGTACATTTTGTC | 57.264 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
5533 | 5888 | 2.372172 | ACTTACACTGACCCCTCCTTTG | 59.628 | 50.000 | 0.00 | 0.00 | 0.00 | 2.77 |
5534 | 5889 | 2.112279 | TACACTGACCCCTCCTTTGT | 57.888 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
5581 | 5936 | 2.046892 | GTGCTGCGTGATCCCTGT | 60.047 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
5617 | 5972 | 1.862201 | CAAACGTTTGTCCTACTCGCA | 59.138 | 47.619 | 28.72 | 0.00 | 33.59 | 5.10 |
5624 | 5979 | 2.902705 | TGTCCTACTCGCAAAGTTGT | 57.097 | 45.000 | 0.00 | 0.00 | 39.55 | 3.32 |
5657 | 6012 | 8.721478 | TGCTTTATCATTCTTTCAGTGTTACTC | 58.279 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
5661 | 6016 | 5.794894 | TCATTCTTTCAGTGTTACTCCCTC | 58.205 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
5662 | 6017 | 4.618920 | TTCTTTCAGTGTTACTCCCTCC | 57.381 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
5672 | 6027 | 0.042131 | TACTCCCTCCGTCCCACAAT | 59.958 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
5680 | 6035 | 4.563580 | CCCTCCGTCCCACAATATAAGATG | 60.564 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
5681 | 6036 | 4.563580 | CCTCCGTCCCACAATATAAGATGG | 60.564 | 50.000 | 0.00 | 0.00 | 35.36 | 3.51 |
5685 | 6040 | 6.099990 | TCCGTCCCACAATATAAGATGGTTTA | 59.900 | 38.462 | 0.00 | 0.00 | 35.52 | 2.01 |
5686 | 6041 | 6.426937 | CCGTCCCACAATATAAGATGGTTTAG | 59.573 | 42.308 | 0.00 | 0.00 | 0.00 | 1.85 |
5688 | 6043 | 6.998673 | GTCCCACAATATAAGATGGTTTAGCT | 59.001 | 38.462 | 0.00 | 0.00 | 0.00 | 3.32 |
5689 | 6044 | 7.502561 | GTCCCACAATATAAGATGGTTTAGCTT | 59.497 | 37.037 | 0.00 | 0.00 | 38.77 | 3.74 |
5691 | 6046 | 7.502226 | CCCACAATATAAGATGGTTTAGCTTGA | 59.498 | 37.037 | 0.00 | 0.00 | 35.44 | 3.02 |
5740 | 6107 | 7.093289 | CGGAGGGAGTACATCTAAATATCCATT | 60.093 | 40.741 | 0.00 | 0.00 | 0.00 | 3.16 |
5741 | 6108 | 8.261522 | GGAGGGAGTACATCTAAATATCCATTC | 58.738 | 40.741 | 0.00 | 0.00 | 0.00 | 2.67 |
5928 | 6295 | 9.401058 | CTCTTGGTATTCTGTATCATTTCCTTT | 57.599 | 33.333 | 0.00 | 0.00 | 0.00 | 3.11 |
5929 | 6296 | 9.753674 | TCTTGGTATTCTGTATCATTTCCTTTT | 57.246 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
6077 | 6451 | 2.232696 | GTCTCAGAGTTCTCAAGGGTCC | 59.767 | 54.545 | 0.00 | 0.00 | 0.00 | 4.46 |
6099 | 6473 | 3.812053 | CCAAAGTTCAGACAGAGGACAAG | 59.188 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
6114 | 6488 | 2.427095 | GGACAAGCCCTTTTTGCGATAT | 59.573 | 45.455 | 0.00 | 0.00 | 0.00 | 1.63 |
6532 | 6907 | 0.178970 | GCATCCATCCCAGCATCCTT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
6564 | 6939 | 2.038164 | CCGAGATGGATGATGATGGTGT | 59.962 | 50.000 | 0.00 | 0.00 | 42.00 | 4.16 |
6649 | 7024 | 3.196469 | AGAAGAACCTGATTCAGATCGCA | 59.804 | 43.478 | 15.36 | 0.00 | 40.09 | 5.10 |
6725 | 7100 | 2.673523 | GGTGCCTGATGGAGTGCT | 59.326 | 61.111 | 0.00 | 0.00 | 34.57 | 4.40 |
6790 | 7165 | 2.980233 | GTGGCGGACAAGCAGCTT | 60.980 | 61.111 | 0.21 | 0.21 | 37.85 | 3.74 |
6823 | 7198 | 3.258372 | TCCTCTACGACATGCAGAAGTTT | 59.742 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
6855 | 7230 | 1.671742 | GCAAGTCGTCCAGGGAAGA | 59.328 | 57.895 | 0.00 | 0.00 | 0.00 | 2.87 |
6865 | 7240 | 3.775654 | AGGGAAGAAGAGGCCGCG | 61.776 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
6907 | 7282 | 1.039068 | CTGCTCCTGATCCGAGTGAT | 58.961 | 55.000 | 8.30 | 0.00 | 36.01 | 3.06 |
7057 | 7432 | 1.329256 | GCCGTCCAGCTATCCTAGAA | 58.671 | 55.000 | 0.00 | 0.00 | 0.00 | 2.10 |
7122 | 7497 | 1.878948 | GCATGCCCACAACTTGCAATT | 60.879 | 47.619 | 6.36 | 0.00 | 38.69 | 2.32 |
7482 | 8040 | 2.981997 | CCGGTTTATAGCCACGGTC | 58.018 | 57.895 | 0.00 | 0.00 | 39.70 | 4.79 |
7557 | 8116 | 4.640771 | ACTTTGCATCTCAAGTCCCTAA | 57.359 | 40.909 | 0.00 | 0.00 | 35.84 | 2.69 |
7676 | 8437 | 8.691797 | TGAACATTATCCTTAGGCCAATAAAAC | 58.308 | 33.333 | 5.01 | 0.00 | 0.00 | 2.43 |
7839 | 8601 | 7.284489 | TCAGTTTTGTTATGTGCTACTTTCCTT | 59.716 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
7861 | 8623 | 2.620115 | GGTGATTGCCCATGTCATACAG | 59.380 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
7896 | 8658 | 2.689983 | CTGTTTCCAGCAAAGAACAGGT | 59.310 | 45.455 | 12.46 | 0.00 | 43.11 | 4.00 |
7921 | 8683 | 5.923684 | GGCGTTCTTTTGTTTTATGAATGGA | 59.076 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
7971 | 8734 | 6.732531 | TTGATGAGCAAATTCTCTACAGTG | 57.267 | 37.500 | 0.00 | 0.00 | 32.46 | 3.66 |
7986 | 8749 | 6.158169 | TCTCTACAGTGATACTCCCTCTGTAA | 59.842 | 42.308 | 0.00 | 0.00 | 39.82 | 2.41 |
7990 | 8753 | 5.654650 | ACAGTGATACTCCCTCTGTAAAGAG | 59.345 | 44.000 | 2.55 | 2.55 | 37.55 | 2.85 |
8031 | 8809 | 9.482627 | AGATCTAAGCGGTCTTATATTTCTTTG | 57.517 | 33.333 | 0.00 | 0.00 | 34.54 | 2.77 |
8040 | 8818 | 6.828785 | GGTCTTATATTTCTTTGCAGAGGGAA | 59.171 | 38.462 | 4.15 | 0.78 | 0.00 | 3.97 |
8098 | 8876 | 4.588899 | TCACCTTCTGGACCATACATTTG | 58.411 | 43.478 | 0.00 | 0.00 | 37.04 | 2.32 |
8099 | 8877 | 4.042809 | TCACCTTCTGGACCATACATTTGT | 59.957 | 41.667 | 0.00 | 0.00 | 37.04 | 2.83 |
8101 | 8879 | 5.943416 | CACCTTCTGGACCATACATTTGTTA | 59.057 | 40.000 | 0.00 | 0.00 | 37.04 | 2.41 |
8102 | 8880 | 6.094048 | CACCTTCTGGACCATACATTTGTTAG | 59.906 | 42.308 | 0.00 | 0.00 | 37.04 | 2.34 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
15 | 16 | 3.432252 | AGTCAGAAGAATTAACGTTGGCG | 59.568 | 43.478 | 11.99 | 0.00 | 44.93 | 5.69 |
20 | 21 | 7.360438 | GCATCTTGAAGTCAGAAGAATTAACGT | 60.360 | 37.037 | 0.00 | 0.00 | 31.24 | 3.99 |
29 | 30 | 4.023450 | TGCAAAGCATCTTGAAGTCAGAAG | 60.023 | 41.667 | 0.00 | 0.00 | 31.71 | 2.85 |
44 | 46 | 4.098349 | ACTCTTTGATGTTTCTGCAAAGCA | 59.902 | 37.500 | 0.00 | 0.00 | 44.88 | 3.91 |
122 | 163 | 2.222227 | AGCAAAATTCTCAGTCCCCC | 57.778 | 50.000 | 0.00 | 0.00 | 0.00 | 5.40 |
139 | 180 | 2.370189 | AGCATCACTTGGTAGGGATAGC | 59.630 | 50.000 | 0.00 | 0.00 | 42.74 | 2.97 |
149 | 190 | 1.812571 | GGTGGTTACAGCATCACTTGG | 59.187 | 52.381 | 0.00 | 0.00 | 44.32 | 3.61 |
503 | 548 | 1.520787 | GCGCTATGTAGCCACGGTT | 60.521 | 57.895 | 0.00 | 0.00 | 46.34 | 4.44 |
512 | 557 | 0.318441 | GAGCATCCAGGCGCTATGTA | 59.682 | 55.000 | 7.64 | 0.00 | 38.99 | 2.29 |
589 | 634 | 5.221422 | CCACACAAGAATGGTGGTATTTGTT | 60.221 | 40.000 | 0.00 | 0.00 | 40.31 | 2.83 |
591 | 636 | 4.321899 | CCCACACAAGAATGGTGGTATTTG | 60.322 | 45.833 | 8.99 | 0.00 | 42.05 | 2.32 |
594 | 639 | 2.647299 | TCCCACACAAGAATGGTGGTAT | 59.353 | 45.455 | 8.99 | 0.00 | 42.05 | 2.73 |
595 | 640 | 2.058705 | TCCCACACAAGAATGGTGGTA | 58.941 | 47.619 | 8.99 | 0.00 | 42.05 | 3.25 |
597 | 642 | 1.993956 | TTCCCACACAAGAATGGTGG | 58.006 | 50.000 | 0.00 | 0.00 | 42.67 | 4.61 |
598 | 643 | 3.156293 | TCATTCCCACACAAGAATGGTG | 58.844 | 45.455 | 11.60 | 0.00 | 46.09 | 4.17 |
601 | 646 | 5.939883 | TCTAGTTCATTCCCACACAAGAATG | 59.060 | 40.000 | 6.42 | 6.42 | 47.00 | 2.67 |
602 | 647 | 5.940470 | GTCTAGTTCATTCCCACACAAGAAT | 59.060 | 40.000 | 0.00 | 0.00 | 32.95 | 2.40 |
605 | 655 | 3.679980 | CGTCTAGTTCATTCCCACACAAG | 59.320 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
618 | 668 | 0.320421 | TTGCTGTGCCCGTCTAGTTC | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
621 | 671 | 2.094659 | CGTTGCTGTGCCCGTCTAG | 61.095 | 63.158 | 0.00 | 0.00 | 0.00 | 2.43 |
661 | 905 | 5.116882 | ACTAGTGCGATAAGTTTTCATCCC | 58.883 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
662 | 906 | 6.478588 | CAACTAGTGCGATAAGTTTTCATCC | 58.521 | 40.000 | 0.00 | 0.00 | 31.21 | 3.51 |
663 | 907 | 5.960105 | GCAACTAGTGCGATAAGTTTTCATC | 59.040 | 40.000 | 0.00 | 0.00 | 45.10 | 2.92 |
664 | 908 | 5.869350 | GCAACTAGTGCGATAAGTTTTCAT | 58.131 | 37.500 | 0.00 | 0.00 | 45.10 | 2.57 |
665 | 909 | 5.277601 | GCAACTAGTGCGATAAGTTTTCA | 57.722 | 39.130 | 0.00 | 0.00 | 45.10 | 2.69 |
678 | 922 | 4.686091 | TCATCTTCGAACAAGCAACTAGTG | 59.314 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
679 | 923 | 4.883083 | TCATCTTCGAACAAGCAACTAGT | 58.117 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
680 | 924 | 4.328440 | CCTCATCTTCGAACAAGCAACTAG | 59.672 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
681 | 925 | 4.245660 | CCTCATCTTCGAACAAGCAACTA | 58.754 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
682 | 926 | 3.070018 | CCTCATCTTCGAACAAGCAACT | 58.930 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
683 | 927 | 2.808543 | ACCTCATCTTCGAACAAGCAAC | 59.191 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
684 | 928 | 3.126001 | ACCTCATCTTCGAACAAGCAA | 57.874 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
685 | 929 | 2.807967 | CAACCTCATCTTCGAACAAGCA | 59.192 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
686 | 930 | 2.808543 | ACAACCTCATCTTCGAACAAGC | 59.191 | 45.455 | 0.00 | 0.00 | 0.00 | 4.01 |
687 | 931 | 3.364366 | GCACAACCTCATCTTCGAACAAG | 60.364 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
688 | 932 | 2.548057 | GCACAACCTCATCTTCGAACAA | 59.452 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
689 | 933 | 2.143122 | GCACAACCTCATCTTCGAACA | 58.857 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
690 | 934 | 2.413453 | GAGCACAACCTCATCTTCGAAC | 59.587 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
691 | 935 | 2.612972 | GGAGCACAACCTCATCTTCGAA | 60.613 | 50.000 | 0.00 | 0.00 | 33.47 | 3.71 |
692 | 936 | 1.066858 | GGAGCACAACCTCATCTTCGA | 60.067 | 52.381 | 0.00 | 0.00 | 33.47 | 3.71 |
693 | 937 | 1.066573 | AGGAGCACAACCTCATCTTCG | 60.067 | 52.381 | 0.00 | 0.00 | 33.47 | 3.79 |
694 | 938 | 2.777832 | AGGAGCACAACCTCATCTTC | 57.222 | 50.000 | 0.00 | 0.00 | 33.47 | 2.87 |
701 | 945 | 2.300437 | GACTAACTGAGGAGCACAACCT | 59.700 | 50.000 | 0.00 | 0.00 | 40.80 | 3.50 |
702 | 946 | 2.689646 | GACTAACTGAGGAGCACAACC | 58.310 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
703 | 947 | 2.329379 | CGACTAACTGAGGAGCACAAC | 58.671 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
704 | 948 | 1.336887 | GCGACTAACTGAGGAGCACAA | 60.337 | 52.381 | 0.00 | 0.00 | 33.47 | 3.33 |
705 | 949 | 0.243907 | GCGACTAACTGAGGAGCACA | 59.756 | 55.000 | 0.00 | 0.00 | 33.47 | 4.57 |
706 | 950 | 0.528470 | AGCGACTAACTGAGGAGCAC | 59.472 | 55.000 | 0.00 | 0.00 | 35.06 | 4.40 |
707 | 951 | 0.811915 | GAGCGACTAACTGAGGAGCA | 59.188 | 55.000 | 0.00 | 0.00 | 35.06 | 4.26 |
708 | 952 | 1.064952 | GAGAGCGACTAACTGAGGAGC | 59.935 | 57.143 | 0.00 | 0.00 | 33.44 | 4.70 |
709 | 953 | 1.673920 | GGAGAGCGACTAACTGAGGAG | 59.326 | 57.143 | 0.00 | 0.00 | 0.00 | 3.69 |
710 | 954 | 1.752683 | GGAGAGCGACTAACTGAGGA | 58.247 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
711 | 955 | 0.378962 | CGGAGAGCGACTAACTGAGG | 59.621 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
712 | 956 | 0.378962 | CCGGAGAGCGACTAACTGAG | 59.621 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
713 | 957 | 0.035725 | TCCGGAGAGCGACTAACTGA | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
714 | 958 | 0.099082 | GTCCGGAGAGCGACTAACTG | 59.901 | 60.000 | 3.06 | 0.00 | 0.00 | 3.16 |
715 | 959 | 1.031029 | GGTCCGGAGAGCGACTAACT | 61.031 | 60.000 | 3.06 | 0.00 | 0.00 | 2.24 |
716 | 960 | 1.432657 | GGTCCGGAGAGCGACTAAC | 59.567 | 63.158 | 3.06 | 0.00 | 0.00 | 2.34 |
717 | 961 | 3.915575 | GGTCCGGAGAGCGACTAA | 58.084 | 61.111 | 3.06 | 0.00 | 0.00 | 2.24 |
729 | 973 | 2.184579 | GAAGGAAGAGCCGGTCCG | 59.815 | 66.667 | 3.60 | 3.60 | 43.43 | 4.79 |
730 | 974 | 1.627297 | ATGGAAGGAAGAGCCGGTCC | 61.627 | 60.000 | 1.90 | 1.07 | 42.81 | 4.46 |
731 | 975 | 0.253327 | AATGGAAGGAAGAGCCGGTC | 59.747 | 55.000 | 1.90 | 0.00 | 43.43 | 4.79 |
732 | 976 | 0.253327 | GAATGGAAGGAAGAGCCGGT | 59.747 | 55.000 | 1.90 | 0.00 | 43.43 | 5.28 |
733 | 977 | 0.464554 | GGAATGGAAGGAAGAGCCGG | 60.465 | 60.000 | 0.00 | 0.00 | 43.43 | 6.13 |
734 | 978 | 0.253044 | TGGAATGGAAGGAAGAGCCG | 59.747 | 55.000 | 0.00 | 0.00 | 43.43 | 5.52 |
735 | 979 | 2.744352 | ATGGAATGGAAGGAAGAGCC | 57.256 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
736 | 980 | 5.196695 | ACTAAATGGAATGGAAGGAAGAGC | 58.803 | 41.667 | 0.00 | 0.00 | 0.00 | 4.09 |
737 | 981 | 8.678199 | GTTTACTAAATGGAATGGAAGGAAGAG | 58.322 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
738 | 982 | 8.167392 | TGTTTACTAAATGGAATGGAAGGAAGA | 58.833 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
739 | 983 | 8.348285 | TGTTTACTAAATGGAATGGAAGGAAG | 57.652 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
740 | 984 | 8.893563 | ATGTTTACTAAATGGAATGGAAGGAA | 57.106 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
741 | 985 | 8.893563 | AATGTTTACTAAATGGAATGGAAGGA | 57.106 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
742 | 986 | 8.197439 | GGAATGTTTACTAAATGGAATGGAAGG | 58.803 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
743 | 987 | 8.748412 | TGGAATGTTTACTAAATGGAATGGAAG | 58.252 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
744 | 988 | 8.657387 | TGGAATGTTTACTAAATGGAATGGAA | 57.343 | 30.769 | 0.00 | 0.00 | 0.00 | 3.53 |
745 | 989 | 8.694540 | CATGGAATGTTTACTAAATGGAATGGA | 58.305 | 33.333 | 0.00 | 0.00 | 40.20 | 3.41 |
746 | 990 | 8.694540 | TCATGGAATGTTTACTAAATGGAATGG | 58.305 | 33.333 | 0.00 | 0.00 | 46.80 | 3.16 |
766 | 1010 | 1.148949 | CATCACGGCCCATCATGGA | 59.851 | 57.895 | 4.75 | 0.00 | 40.96 | 3.41 |
783 | 1027 | 0.967662 | TGATAAACGGTCCGGTCACA | 59.032 | 50.000 | 17.28 | 7.55 | 0.00 | 3.58 |
887 | 1131 | 0.179189 | GATTTGGCTGCGTTCCTTCG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
891 | 1135 | 1.019278 | TCGAGATTTGGCTGCGTTCC | 61.019 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
902 | 1146 | 0.246635 | CGTGGGTGGACTCGAGATTT | 59.753 | 55.000 | 21.68 | 0.00 | 0.00 | 2.17 |
905 | 1149 | 2.675423 | CCGTGGGTGGACTCGAGA | 60.675 | 66.667 | 21.68 | 0.00 | 0.00 | 4.04 |
1063 | 1307 | 2.042843 | GAGGAAGGCGGAGAGGGA | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
1107 | 1351 | 1.333636 | ATGTGGAGGAGGAAGAGGCG | 61.334 | 60.000 | 0.00 | 0.00 | 0.00 | 5.52 |
1108 | 1352 | 0.467804 | GATGTGGAGGAGGAAGAGGC | 59.532 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1109 | 1353 | 1.127343 | GGATGTGGAGGAGGAAGAGG | 58.873 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1110 | 1354 | 1.484240 | GTGGATGTGGAGGAGGAAGAG | 59.516 | 57.143 | 0.00 | 0.00 | 0.00 | 2.85 |
1111 | 1355 | 1.573108 | GTGGATGTGGAGGAGGAAGA | 58.427 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1112 | 1356 | 0.543749 | GGTGGATGTGGAGGAGGAAG | 59.456 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1113 | 1357 | 0.119155 | AGGTGGATGTGGAGGAGGAA | 59.881 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1114 | 1358 | 0.325671 | GAGGTGGATGTGGAGGAGGA | 60.326 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1115 | 1359 | 1.341156 | GGAGGTGGATGTGGAGGAGG | 61.341 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1116 | 1360 | 1.341156 | GGGAGGTGGATGTGGAGGAG | 61.341 | 65.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1117 | 1361 | 1.306997 | GGGAGGTGGATGTGGAGGA | 60.307 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
1118 | 1362 | 2.378634 | GGGGAGGTGGATGTGGAGG | 61.379 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1119 | 1363 | 2.735772 | CGGGGAGGTGGATGTGGAG | 61.736 | 68.421 | 0.00 | 0.00 | 0.00 | 3.86 |
1120 | 1364 | 2.687200 | CGGGGAGGTGGATGTGGA | 60.687 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
1121 | 1365 | 4.489771 | GCGGGGAGGTGGATGTGG | 62.490 | 72.222 | 0.00 | 0.00 | 0.00 | 4.17 |
1122 | 1366 | 4.489771 | GGCGGGGAGGTGGATGTG | 62.490 | 72.222 | 0.00 | 0.00 | 0.00 | 3.21 |
1125 | 1369 | 4.760220 | AAGGGCGGGGAGGTGGAT | 62.760 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
1128 | 1372 | 4.410400 | GACAAGGGCGGGGAGGTG | 62.410 | 72.222 | 0.00 | 0.00 | 0.00 | 4.00 |
1136 | 1380 | 3.330720 | AAGGGAGGGACAAGGGCG | 61.331 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
1137 | 1381 | 2.677848 | GAAGGGAGGGACAAGGGC | 59.322 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
1138 | 1382 | 2.309504 | GGGAAGGGAGGGACAAGGG | 61.310 | 68.421 | 0.00 | 0.00 | 0.00 | 3.95 |
1139 | 1383 | 1.229984 | AGGGAAGGGAGGGACAAGG | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 3.61 |
1140 | 1384 | 0.547712 | TGAGGGAAGGGAGGGACAAG | 60.548 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1141 | 1385 | 0.840722 | GTGAGGGAAGGGAGGGACAA | 60.841 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1142 | 1386 | 1.229529 | GTGAGGGAAGGGAGGGACA | 60.230 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
1143 | 1387 | 1.996187 | GGTGAGGGAAGGGAGGGAC | 60.996 | 68.421 | 0.00 | 0.00 | 0.00 | 4.46 |
1144 | 1388 | 2.454941 | GGTGAGGGAAGGGAGGGA | 59.545 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
1145 | 1389 | 2.692741 | GGGTGAGGGAAGGGAGGG | 60.693 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
1146 | 1390 | 1.690985 | GAGGGTGAGGGAAGGGAGG | 60.691 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1147 | 1391 | 1.690985 | GGAGGGTGAGGGAAGGGAG | 60.691 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1148 | 1392 | 2.182858 | GAGGAGGGTGAGGGAAGGGA | 62.183 | 65.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1149 | 1393 | 1.690985 | GAGGAGGGTGAGGGAAGGG | 60.691 | 68.421 | 0.00 | 0.00 | 0.00 | 3.95 |
1150 | 1394 | 0.689412 | GAGAGGAGGGTGAGGGAAGG | 60.689 | 65.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1151 | 1395 | 0.689412 | GGAGAGGAGGGTGAGGGAAG | 60.689 | 65.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1152 | 1396 | 1.156322 | AGGAGAGGAGGGTGAGGGAA | 61.156 | 60.000 | 0.00 | 0.00 | 0.00 | 3.97 |
1153 | 1397 | 1.547755 | AGGAGAGGAGGGTGAGGGA | 60.548 | 63.158 | 0.00 | 0.00 | 0.00 | 4.20 |
1154 | 1398 | 1.075600 | GAGGAGAGGAGGGTGAGGG | 60.076 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
1155 | 1399 | 1.075600 | GGAGGAGAGGAGGGTGAGG | 60.076 | 68.421 | 0.00 | 0.00 | 0.00 | 3.86 |
1156 | 1400 | 1.075600 | GGGAGGAGAGGAGGGTGAG | 60.076 | 68.421 | 0.00 | 0.00 | 0.00 | 3.51 |
1157 | 1401 | 2.637640 | GGGGAGGAGAGGAGGGTGA | 61.638 | 68.421 | 0.00 | 0.00 | 0.00 | 4.02 |
1158 | 1402 | 2.041405 | GGGGAGGAGAGGAGGGTG | 60.041 | 72.222 | 0.00 | 0.00 | 0.00 | 4.61 |
1159 | 1403 | 3.756783 | CGGGGAGGAGAGGAGGGT | 61.757 | 72.222 | 0.00 | 0.00 | 0.00 | 4.34 |
1160 | 1404 | 4.548513 | CCGGGGAGGAGAGGAGGG | 62.549 | 77.778 | 0.00 | 0.00 | 45.00 | 4.30 |
1188 | 1432 | 4.806339 | AGGCGGGGGAAGAGGGAG | 62.806 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
1189 | 1433 | 4.798682 | GAGGCGGGGGAAGAGGGA | 62.799 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
1643 | 1887 | 2.615288 | AAGAGGGAGGCAAGGGGG | 60.615 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
1814 | 2070 | 4.742649 | TCGGCGAGCAGGGAGAGT | 62.743 | 66.667 | 4.99 | 0.00 | 0.00 | 3.24 |
2171 | 2508 | 1.066143 | ACCTCAACTATGGCCTCAACG | 60.066 | 52.381 | 3.32 | 0.00 | 0.00 | 4.10 |
2229 | 2566 | 0.848735 | ATGGCCACCAGATATGCAGT | 59.151 | 50.000 | 8.16 | 0.00 | 36.75 | 4.40 |
2420 | 2757 | 2.954684 | ATTCGTCAAGGCCCGAGCA | 61.955 | 57.895 | 0.00 | 0.00 | 42.56 | 4.26 |
2490 | 2827 | 3.135348 | CCTATCTTCATCACCTCCTGCAA | 59.865 | 47.826 | 0.00 | 0.00 | 0.00 | 4.08 |
2510 | 2847 | 0.995024 | CTCCAAGACCCATGTTCCCT | 59.005 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2567 | 2904 | 2.945008 | CACAAGTGAAGCTTTCCTCACA | 59.055 | 45.455 | 16.51 | 0.00 | 34.69 | 3.58 |
2570 | 2907 | 2.225255 | GAGCACAAGTGAAGCTTTCCTC | 59.775 | 50.000 | 0.00 | 0.00 | 39.02 | 3.71 |
2660 | 2997 | 1.339610 | GTGACTAGCGGATCAGAGCAT | 59.660 | 52.381 | 0.00 | 0.00 | 35.48 | 3.79 |
2774 | 3111 | 5.660417 | ACTGGTCTCACTATCAATCATCAGT | 59.340 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2992 | 3329 | 3.251972 | CAGTGGTCTCAGCTTTTTCTTCC | 59.748 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
3442 | 3779 | 5.182001 | GCAAGACTCCACTGTAACATGAAAT | 59.818 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
3495 | 3832 | 0.947244 | CAGAACACAGTTGCCAGACC | 59.053 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3591 | 3928 | 4.656112 | AGTCCCACTATCACAAGGAATAGG | 59.344 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
3658 | 3995 | 7.662258 | TCAAAAACGTTCTTATATTCTGGGACA | 59.338 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
3659 | 3996 | 7.961283 | GTCAAAAACGTTCTTATATTCTGGGAC | 59.039 | 37.037 | 0.00 | 0.00 | 0.00 | 4.46 |
3660 | 3997 | 7.662258 | TGTCAAAAACGTTCTTATATTCTGGGA | 59.338 | 33.333 | 0.00 | 0.00 | 0.00 | 4.37 |
3661 | 3998 | 7.749126 | GTGTCAAAAACGTTCTTATATTCTGGG | 59.251 | 37.037 | 0.00 | 0.00 | 0.00 | 4.45 |
3662 | 3999 | 8.504005 | AGTGTCAAAAACGTTCTTATATTCTGG | 58.496 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
3666 | 4003 | 9.769093 | GCATAGTGTCAAAAACGTTCTTATATT | 57.231 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
3667 | 4004 | 9.162764 | AGCATAGTGTCAAAAACGTTCTTATAT | 57.837 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
3668 | 4005 | 8.542497 | AGCATAGTGTCAAAAACGTTCTTATA | 57.458 | 30.769 | 0.00 | 0.00 | 0.00 | 0.98 |
3669 | 4006 | 7.435068 | AGCATAGTGTCAAAAACGTTCTTAT | 57.565 | 32.000 | 0.00 | 0.00 | 0.00 | 1.73 |
3670 | 4007 | 6.854496 | AGCATAGTGTCAAAAACGTTCTTA | 57.146 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
3671 | 4008 | 5.751243 | AGCATAGTGTCAAAAACGTTCTT | 57.249 | 34.783 | 0.00 | 0.00 | 0.00 | 2.52 |
3672 | 4009 | 6.467723 | CTAGCATAGTGTCAAAAACGTTCT | 57.532 | 37.500 | 0.00 | 0.00 | 32.85 | 3.01 |
3698 | 4035 | 9.609950 | CGTCCCAAAATATAAGAACGTTTTTAA | 57.390 | 29.630 | 14.41 | 5.85 | 0.00 | 1.52 |
3699 | 4036 | 8.235905 | CCGTCCCAAAATATAAGAACGTTTTTA | 58.764 | 33.333 | 13.02 | 13.02 | 0.00 | 1.52 |
3700 | 4037 | 7.040548 | TCCGTCCCAAAATATAAGAACGTTTTT | 60.041 | 33.333 | 9.22 | 9.22 | 0.00 | 1.94 |
3701 | 4038 | 6.430616 | TCCGTCCCAAAATATAAGAACGTTTT | 59.569 | 34.615 | 0.46 | 0.00 | 0.00 | 2.43 |
3702 | 4039 | 5.939296 | TCCGTCCCAAAATATAAGAACGTTT | 59.061 | 36.000 | 0.46 | 0.00 | 0.00 | 3.60 |
3703 | 4040 | 5.490159 | TCCGTCCCAAAATATAAGAACGTT | 58.510 | 37.500 | 0.00 | 0.00 | 0.00 | 3.99 |
3704 | 4041 | 5.088680 | TCCGTCCCAAAATATAAGAACGT | 57.911 | 39.130 | 0.00 | 0.00 | 0.00 | 3.99 |
3705 | 4042 | 4.510340 | CCTCCGTCCCAAAATATAAGAACG | 59.490 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
3706 | 4043 | 4.820173 | CCCTCCGTCCCAAAATATAAGAAC | 59.180 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
3707 | 4044 | 4.722781 | TCCCTCCGTCCCAAAATATAAGAA | 59.277 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
3708 | 4045 | 4.300345 | TCCCTCCGTCCCAAAATATAAGA | 58.700 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
3709 | 4046 | 4.102681 | ACTCCCTCCGTCCCAAAATATAAG | 59.897 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
3710 | 4047 | 4.042174 | ACTCCCTCCGTCCCAAAATATAA | 58.958 | 43.478 | 0.00 | 0.00 | 0.00 | 0.98 |
3711 | 4048 | 3.660959 | ACTCCCTCCGTCCCAAAATATA | 58.339 | 45.455 | 0.00 | 0.00 | 0.00 | 0.86 |
3712 | 4049 | 2.488836 | ACTCCCTCCGTCCCAAAATAT | 58.511 | 47.619 | 0.00 | 0.00 | 0.00 | 1.28 |
3713 | 4050 | 1.961133 | ACTCCCTCCGTCCCAAAATA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3714 | 4051 | 1.961133 | TACTCCCTCCGTCCCAAAAT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3715 | 4052 | 1.961133 | ATACTCCCTCCGTCCCAAAA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
3716 | 4053 | 1.961133 | AATACTCCCTCCGTCCCAAA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
3717 | 4054 | 1.835531 | GAAATACTCCCTCCGTCCCAA | 59.164 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
3718 | 4055 | 1.273381 | TGAAATACTCCCTCCGTCCCA | 60.273 | 52.381 | 0.00 | 0.00 | 0.00 | 4.37 |
3719 | 4056 | 1.492764 | TGAAATACTCCCTCCGTCCC | 58.507 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3720 | 4057 | 4.262506 | CCTTATGAAATACTCCCTCCGTCC | 60.263 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3721 | 4058 | 4.799917 | GCCTTATGAAATACTCCCTCCGTC | 60.800 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3722 | 4059 | 3.071167 | GCCTTATGAAATACTCCCTCCGT | 59.929 | 47.826 | 0.00 | 0.00 | 0.00 | 4.69 |
3723 | 4060 | 3.557264 | GGCCTTATGAAATACTCCCTCCG | 60.557 | 52.174 | 0.00 | 0.00 | 0.00 | 4.63 |
3724 | 4061 | 3.653352 | AGGCCTTATGAAATACTCCCTCC | 59.347 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
3725 | 4062 | 4.984146 | AGGCCTTATGAAATACTCCCTC | 57.016 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
3726 | 4063 | 4.726825 | TCAAGGCCTTATGAAATACTCCCT | 59.273 | 41.667 | 20.00 | 0.00 | 0.00 | 4.20 |
3727 | 4064 | 5.048846 | TCAAGGCCTTATGAAATACTCCC | 57.951 | 43.478 | 20.00 | 0.00 | 0.00 | 4.30 |
3728 | 4065 | 6.547510 | ACATTCAAGGCCTTATGAAATACTCC | 59.452 | 38.462 | 27.71 | 0.00 | 38.88 | 3.85 |
3729 | 4066 | 7.573968 | ACATTCAAGGCCTTATGAAATACTC | 57.426 | 36.000 | 27.71 | 0.00 | 38.88 | 2.59 |
3730 | 4067 | 7.721399 | CCTACATTCAAGGCCTTATGAAATACT | 59.279 | 37.037 | 27.71 | 11.83 | 38.88 | 2.12 |
3731 | 4068 | 7.502561 | ACCTACATTCAAGGCCTTATGAAATAC | 59.497 | 37.037 | 27.71 | 0.00 | 38.88 | 1.89 |
3732 | 4069 | 7.582719 | ACCTACATTCAAGGCCTTATGAAATA | 58.417 | 34.615 | 27.71 | 18.78 | 38.88 | 1.40 |
3733 | 4070 | 6.435164 | ACCTACATTCAAGGCCTTATGAAAT | 58.565 | 36.000 | 27.71 | 18.69 | 38.88 | 2.17 |
3797 | 4134 | 5.871396 | ATGATACCCAGACACGACTTATT | 57.129 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
3898 | 4235 | 1.331214 | CAGGGCCATTTTGTGACTGT | 58.669 | 50.000 | 6.18 | 0.00 | 0.00 | 3.55 |
3945 | 4282 | 9.725019 | AAATACTGCATTATCTTATGATCCGAA | 57.275 | 29.630 | 0.00 | 0.00 | 34.32 | 4.30 |
3970 | 4307 | 6.616017 | TGACAAATATCAAAGCAACGCATAA | 58.384 | 32.000 | 0.00 | 0.00 | 0.00 | 1.90 |
4005 | 4343 | 4.637276 | TGCAGAACTTCGGATAGACAAAA | 58.363 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
4180 | 4518 | 1.134580 | GTAGCAGAGCAAGGATGAGCA | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
4415 | 4754 | 7.592938 | TGTGATGTTCCTTTTATGTAGCTTTG | 58.407 | 34.615 | 0.00 | 0.00 | 0.00 | 2.77 |
4970 | 5317 | 7.093640 | ACGATGTAACTGAGTTATTGAAGGGTA | 60.094 | 37.037 | 8.46 | 0.00 | 30.49 | 3.69 |
5109 | 5460 | 5.105595 | GCAAGGGGAATAATTCTATCATGCC | 60.106 | 44.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5173 | 5526 | 4.132336 | GCTCATATTGGATCAAGCACTGA | 58.868 | 43.478 | 0.00 | 0.00 | 38.81 | 3.41 |
5581 | 5936 | 2.352030 | CGTTTGCCTCCGTACTACTTCA | 60.352 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5617 | 5972 | 4.099266 | TGATAAAGCACCTGCAACAACTTT | 59.901 | 37.500 | 0.00 | 8.81 | 45.16 | 2.66 |
5624 | 5979 | 5.243507 | TGAAAGAATGATAAAGCACCTGCAA | 59.756 | 36.000 | 0.00 | 0.00 | 45.16 | 4.08 |
5657 | 6012 | 2.969950 | TCTTATATTGTGGGACGGAGGG | 59.030 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5661 | 6016 | 4.351874 | ACCATCTTATATTGTGGGACGG | 57.648 | 45.455 | 0.00 | 0.00 | 36.05 | 4.79 |
5662 | 6017 | 6.073222 | GCTAAACCATCTTATATTGTGGGACG | 60.073 | 42.308 | 0.00 | 0.00 | 36.05 | 4.79 |
5685 | 6040 | 8.253113 | CCACAATATAAGATGGTTTTTCAAGCT | 58.747 | 33.333 | 0.00 | 0.00 | 0.00 | 3.74 |
5686 | 6041 | 7.492344 | CCCACAATATAAGATGGTTTTTCAAGC | 59.508 | 37.037 | 0.00 | 0.00 | 0.00 | 4.01 |
5688 | 6043 | 8.527810 | GTCCCACAATATAAGATGGTTTTTCAA | 58.472 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
5689 | 6044 | 7.148154 | CGTCCCACAATATAAGATGGTTTTTCA | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
5691 | 6046 | 6.096282 | CCGTCCCACAATATAAGATGGTTTTT | 59.904 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
5697 | 6064 | 4.563580 | CCCTCCGTCCCACAATATAAGATG | 60.564 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
6077 | 6451 | 3.475566 | TGTCCTCTGTCTGAACTTTGG | 57.524 | 47.619 | 0.00 | 0.00 | 0.00 | 3.28 |
6099 | 6473 | 4.109766 | GTTTACCATATCGCAAAAAGGGC | 58.890 | 43.478 | 0.00 | 0.00 | 0.00 | 5.19 |
6393 | 6768 | 1.430632 | CCATGTGATCTGCCGCAAC | 59.569 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
6556 | 6931 | 0.689412 | TCCCGCCATCTACACCATCA | 60.689 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
6559 | 6934 | 2.717044 | CGTCCCGCCATCTACACCA | 61.717 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
6927 | 7302 | 4.680237 | CCTTGAGCACCGACCGCA | 62.680 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
6967 | 7342 | 4.269523 | ATGGTGTGCAGCGGTGGT | 62.270 | 61.111 | 17.54 | 0.00 | 0.00 | 4.16 |
7057 | 7432 | 2.755876 | TCGAGCCGCCTGACTGAT | 60.756 | 61.111 | 0.00 | 0.00 | 0.00 | 2.90 |
7155 | 7530 | 1.530720 | TCTACGTGTGCATGCAACAAG | 59.469 | 47.619 | 24.58 | 23.87 | 0.00 | 3.16 |
7518 | 8076 | 2.818921 | AGTTGGGCCATGCAGAAAATA | 58.181 | 42.857 | 7.26 | 0.00 | 0.00 | 1.40 |
7519 | 8077 | 1.648116 | AGTTGGGCCATGCAGAAAAT | 58.352 | 45.000 | 7.26 | 0.00 | 0.00 | 1.82 |
7824 | 8586 | 3.788227 | TCACCAAGGAAAGTAGCACAT | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 3.21 |
7839 | 8601 | 2.025510 | TGTATGACATGGGCAATCACCA | 60.026 | 45.455 | 0.00 | 0.00 | 43.22 | 4.17 |
7896 | 8658 | 5.694006 | CCATTCATAAAACAAAAGAACGCCA | 59.306 | 36.000 | 0.00 | 0.00 | 0.00 | 5.69 |
7937 | 8700 | 4.888038 | TTGCTCATCAATGCACTGATAC | 57.112 | 40.909 | 10.81 | 4.34 | 39.05 | 2.24 |
7990 | 8753 | 7.697291 | CCGCTTAGATCTAAACGGTCTTATATC | 59.303 | 40.741 | 34.16 | 2.35 | 44.94 | 1.63 |
8010 | 8773 | 7.045416 | TCTGCAAAGAAATATAAGACCGCTTA | 58.955 | 34.615 | 0.00 | 0.00 | 40.65 | 3.09 |
8012 | 8775 | 5.428253 | TCTGCAAAGAAATATAAGACCGCT | 58.572 | 37.500 | 0.00 | 0.00 | 0.00 | 5.52 |
8031 | 8809 | 5.303078 | TCAAGTAGAGATGTATTCCCTCTGC | 59.697 | 44.000 | 0.00 | 0.00 | 39.09 | 4.26 |
8064 | 8842 | 7.147141 | TGGTCCAGAAGGTGAATGGATATAAAT | 60.147 | 37.037 | 0.00 | 0.00 | 44.59 | 1.40 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.