Multiple sequence alignment - TraesCS5B01G493000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G493000 chr5B 100.000 2568 0 0 1 2568 661207028 661204461 0.000000e+00 4743.0
1 TraesCS5B01G493000 chr5D 90.270 925 32 14 751 1650 526121444 526120553 0.000000e+00 1157.0
2 TraesCS5B01G493000 chr5D 94.954 654 30 3 1 652 526122101 526121449 0.000000e+00 1022.0
3 TraesCS5B01G493000 chr5D 92.400 250 10 4 1651 1900 526117538 526117298 5.260000e-92 348.0
4 TraesCS5B01G493000 chr5D 84.058 276 35 9 2297 2568 457474394 457474124 9.120000e-65 257.0
5 TraesCS5B01G493000 chr5D 96.939 98 3 0 1921 2018 526116160 526116063 5.680000e-37 165.0
6 TraesCS5B01G493000 chr5A 91.000 600 50 2 956 1555 653282008 653281413 0.000000e+00 806.0
7 TraesCS5B01G493000 chr5A 90.833 600 51 2 956 1555 653284640 653284045 0.000000e+00 800.0
8 TraesCS5B01G493000 chr5A 89.917 605 55 4 956 1558 653287273 653286673 0.000000e+00 774.0
9 TraesCS5B01G493000 chr5A 90.374 187 14 2 1720 1902 653279837 653279651 2.550000e-60 243.0
10 TraesCS5B01G493000 chr5A 84.239 184 14 7 1553 1724 653281339 653281159 5.680000e-37 165.0
11 TraesCS5B01G493000 chr5A 86.806 144 16 1 1581 1724 653283931 653283791 9.510000e-35 158.0
12 TraesCS5B01G493000 chr5A 86.806 144 16 1 1581 1724 653286563 653286423 9.510000e-35 158.0
13 TraesCS5B01G493000 chr5A 82.828 99 14 3 21 118 634615074 634615170 4.550000e-13 86.1
14 TraesCS5B01G493000 chr1B 93.455 275 14 4 2298 2568 542938497 542938771 3.080000e-109 405.0
15 TraesCS5B01G493000 chr2D 91.971 274 19 3 2298 2568 608786721 608786994 5.180000e-102 381.0
16 TraesCS5B01G493000 chr2D 84.420 276 36 7 2298 2568 425161335 425161062 5.450000e-67 265.0
17 TraesCS5B01G493000 chr1D 90.876 274 22 3 2298 2568 479201948 479202221 5.220000e-97 364.0
18 TraesCS5B01G493000 chr1D 84.561 285 25 17 2297 2568 175787573 175787851 5.450000e-67 265.0
19 TraesCS5B01G493000 chr4B 89.781 274 25 3 2297 2568 92956674 92956402 5.260000e-92 348.0
20 TraesCS5B01G493000 chr4D 85.971 278 29 9 2297 2568 99352083 99352356 3.230000e-74 289.0
21 TraesCS5B01G493000 chr4D 83.673 98 14 2 16 113 35521410 35521315 9.790000e-15 91.6
22 TraesCS5B01G493000 chr3D 83.871 279 36 7 2297 2568 531433799 531434075 9.120000e-65 257.0
23 TraesCS5B01G493000 chr3D 82.031 128 22 1 1 128 395665788 395665662 9.720000e-20 108.0
24 TraesCS5B01G493000 chr7D 89.147 129 11 2 1771 1898 29605400 29605526 9.510000e-35 158.0
25 TraesCS5B01G493000 chr7A 90.000 110 9 2 9 118 297943121 297943014 9.580000e-30 141.0
26 TraesCS5B01G493000 chr2B 77.606 259 41 10 237 493 641575603 641575846 9.580000e-30 141.0
27 TraesCS5B01G493000 chr6D 81.513 119 21 1 1 119 3417378 3417495 2.100000e-16 97.1
28 TraesCS5B01G493000 chr4A 83.636 110 11 7 16 123 567039086 567039190 2.100000e-16 97.1
29 TraesCS5B01G493000 chr2A 77.778 117 23 3 3 118 12713228 12713342 4.580000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G493000 chr5B 661204461 661207028 2567 True 4743.000000 4743 100.000000 1 2568 1 chr5B.!!$R1 2567
1 TraesCS5B01G493000 chr5D 526116063 526122101 6038 True 673.000000 1157 93.640750 1 2018 4 chr5D.!!$R2 2017
2 TraesCS5B01G493000 chr5A 653279651 653287273 7622 True 443.428571 806 88.567857 956 1902 7 chr5A.!!$R1 946

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
919 922 0.037697 TCACTCAAACGACCCGATGG 60.038 55.0 0.0 0.0 37.8 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2371 12275 0.03716 GGCGGTAGGAAAAAGGGTCA 59.963 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.607635 TGAGAAAAGCTTGTCGTGTGTC 59.392 45.455 11.03 3.66 0.00 3.67
64 65 0.392461 GCGTGACTGGAATTGCCCTA 60.392 55.000 0.00 0.00 34.97 3.53
65 66 1.948611 GCGTGACTGGAATTGCCCTAA 60.949 52.381 0.00 0.00 34.97 2.69
90 91 2.756907 ACATCAGGTCTAGAGTGCCAT 58.243 47.619 0.00 0.00 0.00 4.40
357 359 3.129287 GTGTCCTGCCTAATCCATTTGTG 59.871 47.826 0.00 0.00 0.00 3.33
408 410 1.364626 GAGTGCTGCCAAGGATGACG 61.365 60.000 0.00 0.00 0.00 4.35
414 416 0.322366 TGCCAAGGATGACGCATTGA 60.322 50.000 0.00 0.00 0.00 2.57
424 426 0.657840 GACGCATTGACATAGGTGGC 59.342 55.000 0.00 0.00 0.00 5.01
452 454 2.783510 GGATTGGGGAGGTGGAGATAAA 59.216 50.000 0.00 0.00 0.00 1.40
463 465 3.118371 GGTGGAGATAAAGGATGACGGTT 60.118 47.826 0.00 0.00 0.00 4.44
608 610 4.444536 TGATAATACGAAAAGAACCCCCG 58.555 43.478 0.00 0.00 0.00 5.73
609 611 2.865119 AATACGAAAAGAACCCCCGT 57.135 45.000 0.00 0.00 37.27 5.28
627 630 1.654105 CGTCTTTTCAGTCCGGATTCG 59.346 52.381 7.81 0.00 0.00 3.34
631 634 3.447586 TCTTTTCAGTCCGGATTCGAGAT 59.552 43.478 7.81 0.00 39.00 2.75
652 655 3.199677 TCGGCTAAATTCCAATGTACCG 58.800 45.455 0.00 0.00 39.44 4.02
653 656 2.286772 CGGCTAAATTCCAATGTACCGC 60.287 50.000 0.00 0.00 0.00 5.68
654 657 2.949644 GGCTAAATTCCAATGTACCGCT 59.050 45.455 0.00 0.00 0.00 5.52
656 659 3.243068 GCTAAATTCCAATGTACCGCTGG 60.243 47.826 0.00 0.00 0.00 4.85
657 660 1.102978 AATTCCAATGTACCGCTGGC 58.897 50.000 0.00 0.00 0.00 4.85
658 661 1.095228 ATTCCAATGTACCGCTGGCG 61.095 55.000 8.08 8.08 39.44 5.69
659 662 2.435938 CCAATGTACCGCTGGCGT 60.436 61.111 13.84 5.01 37.81 5.68
660 663 2.038269 CCAATGTACCGCTGGCGTT 61.038 57.895 13.84 1.99 37.81 4.84
662 665 0.179200 CAATGTACCGCTGGCGTTTC 60.179 55.000 13.84 0.00 37.81 2.78
663 666 0.604243 AATGTACCGCTGGCGTTTCA 60.604 50.000 13.84 4.35 37.81 2.69
665 668 0.604243 TGTACCGCTGGCGTTTCATT 60.604 50.000 13.84 0.00 37.81 2.57
666 669 0.179200 GTACCGCTGGCGTTTCATTG 60.179 55.000 13.84 0.00 37.81 2.82
668 671 0.960364 ACCGCTGGCGTTTCATTGAT 60.960 50.000 13.84 0.00 37.81 2.57
669 672 0.248215 CCGCTGGCGTTTCATTGATC 60.248 55.000 13.84 0.00 37.81 2.92
672 675 2.287644 CGCTGGCGTTTCATTGATCATA 59.712 45.455 6.83 0.00 34.35 2.15
676 679 3.693578 TGGCGTTTCATTGATCATAAGCA 59.306 39.130 0.00 0.00 0.00 3.91
677 680 4.201940 TGGCGTTTCATTGATCATAAGCAG 60.202 41.667 0.00 0.00 0.00 4.24
680 683 6.029607 GCGTTTCATTGATCATAAGCAGAAA 58.970 36.000 0.00 0.00 0.00 2.52
681 684 6.195983 GCGTTTCATTGATCATAAGCAGAAAG 59.804 38.462 0.00 0.00 0.00 2.62
682 685 6.195983 CGTTTCATTGATCATAAGCAGAAAGC 59.804 38.462 0.00 0.00 46.19 3.51
692 695 3.957383 GCAGAAAGCAACGGGAAAA 57.043 47.368 0.00 0.00 44.79 2.29
693 696 1.770957 GCAGAAAGCAACGGGAAAAG 58.229 50.000 0.00 0.00 44.79 2.27
694 697 1.067060 GCAGAAAGCAACGGGAAAAGT 59.933 47.619 0.00 0.00 44.79 2.66
696 699 3.852205 GCAGAAAGCAACGGGAAAAGTAC 60.852 47.826 0.00 0.00 44.79 2.73
697 700 3.314080 CAGAAAGCAACGGGAAAAGTACA 59.686 43.478 0.00 0.00 0.00 2.90
698 701 3.949113 AGAAAGCAACGGGAAAAGTACAA 59.051 39.130 0.00 0.00 0.00 2.41
699 702 3.982576 AAGCAACGGGAAAAGTACAAG 57.017 42.857 0.00 0.00 0.00 3.16
701 704 3.751518 AGCAACGGGAAAAGTACAAGAT 58.248 40.909 0.00 0.00 0.00 2.40
702 705 3.502211 AGCAACGGGAAAAGTACAAGATG 59.498 43.478 0.00 0.00 0.00 2.90
703 706 3.500680 GCAACGGGAAAAGTACAAGATGA 59.499 43.478 0.00 0.00 0.00 2.92
704 707 4.612939 GCAACGGGAAAAGTACAAGATGAC 60.613 45.833 0.00 0.00 0.00 3.06
705 708 3.323243 ACGGGAAAAGTACAAGATGACG 58.677 45.455 0.00 0.00 0.00 4.35
707 710 3.612860 CGGGAAAAGTACAAGATGACGAG 59.387 47.826 0.00 0.00 0.00 4.18
709 712 4.322499 GGGAAAAGTACAAGATGACGAGGA 60.322 45.833 0.00 0.00 0.00 3.71
710 713 5.420409 GGAAAAGTACAAGATGACGAGGAT 58.580 41.667 0.00 0.00 0.00 3.24
713 716 5.923733 AAGTACAAGATGACGAGGATCTT 57.076 39.130 0.00 0.00 40.16 2.40
714 717 7.406031 AAAGTACAAGATGACGAGGATCTTA 57.594 36.000 0.00 0.00 37.95 2.10
715 718 6.627395 AGTACAAGATGACGAGGATCTTAG 57.373 41.667 0.00 0.00 37.95 2.18
717 720 6.829298 AGTACAAGATGACGAGGATCTTAGAA 59.171 38.462 0.00 0.00 37.95 2.10
718 721 6.723298 ACAAGATGACGAGGATCTTAGAAT 57.277 37.500 0.00 0.00 37.95 2.40
719 722 7.825331 ACAAGATGACGAGGATCTTAGAATA 57.175 36.000 0.00 0.00 37.95 1.75
721 724 7.040062 ACAAGATGACGAGGATCTTAGAATAGG 60.040 40.741 0.00 0.00 37.95 2.57
722 725 6.785076 AGATGACGAGGATCTTAGAATAGGA 58.215 40.000 0.00 0.00 0.00 2.94
723 726 6.884295 AGATGACGAGGATCTTAGAATAGGAG 59.116 42.308 0.00 0.00 26.97 3.69
724 727 5.317808 TGACGAGGATCTTAGAATAGGAGG 58.682 45.833 0.00 0.00 26.97 4.30
725 728 4.083565 ACGAGGATCTTAGAATAGGAGGC 58.916 47.826 0.00 0.00 26.97 4.70
726 729 4.202631 ACGAGGATCTTAGAATAGGAGGCT 60.203 45.833 0.00 0.00 26.97 4.58
727 730 4.157656 CGAGGATCTTAGAATAGGAGGCTG 59.842 50.000 0.00 0.00 26.97 4.85
728 731 4.424842 AGGATCTTAGAATAGGAGGCTGG 58.575 47.826 0.00 0.00 26.97 4.85
729 732 3.055458 GGATCTTAGAATAGGAGGCTGGC 60.055 52.174 0.00 0.00 26.97 4.85
730 733 2.330216 TCTTAGAATAGGAGGCTGGCC 58.670 52.381 3.00 3.00 0.00 5.36
731 734 2.050144 CTTAGAATAGGAGGCTGGCCA 58.950 52.381 14.39 4.71 38.92 5.36
733 736 0.621571 AGAATAGGAGGCTGGCCACA 60.622 55.000 14.39 0.00 38.92 4.17
746 749 4.446413 CCACAGCCCGACGGTACC 62.446 72.222 13.94 0.16 0.00 3.34
747 750 3.687102 CACAGCCCGACGGTACCA 61.687 66.667 13.94 0.00 0.00 3.25
748 751 2.682494 ACAGCCCGACGGTACCAT 60.682 61.111 13.94 0.00 0.00 3.55
749 752 1.380246 ACAGCCCGACGGTACCATA 60.380 57.895 13.94 0.00 0.00 2.74
753 756 0.312102 GCCCGACGGTACCATAGTAC 59.688 60.000 13.94 0.00 46.90 2.73
775 778 4.651778 CCATTTCTTGGTTACTCTGACCA 58.348 43.478 0.00 0.00 45.09 4.02
776 779 5.256474 CCATTTCTTGGTTACTCTGACCAT 58.744 41.667 0.00 0.00 45.96 3.55
777 780 5.355350 CCATTTCTTGGTTACTCTGACCATC 59.645 44.000 0.00 0.00 45.96 3.51
778 781 3.868757 TCTTGGTTACTCTGACCATCG 57.131 47.619 0.00 0.00 45.96 3.84
779 782 2.094182 TCTTGGTTACTCTGACCATCGC 60.094 50.000 0.00 0.00 45.96 4.58
780 783 0.172578 TGGTTACTCTGACCATCGCG 59.827 55.000 0.00 0.00 42.06 5.87
781 784 1.146358 GGTTACTCTGACCATCGCGC 61.146 60.000 0.00 0.00 37.14 6.86
783 786 0.459899 TTACTCTGACCATCGCGCAT 59.540 50.000 8.75 0.00 0.00 4.73
784 787 0.459899 TACTCTGACCATCGCGCATT 59.540 50.000 8.75 0.00 0.00 3.56
788 791 0.729116 CTGACCATCGCGCATTTTCT 59.271 50.000 8.75 0.00 0.00 2.52
789 792 0.726827 TGACCATCGCGCATTTTCTC 59.273 50.000 8.75 0.00 0.00 2.87
790 793 1.009829 GACCATCGCGCATTTTCTCT 58.990 50.000 8.75 0.00 0.00 3.10
791 794 2.201732 GACCATCGCGCATTTTCTCTA 58.798 47.619 8.75 0.00 0.00 2.43
794 797 3.741344 ACCATCGCGCATTTTCTCTATAC 59.259 43.478 8.75 0.00 0.00 1.47
795 798 3.990469 CCATCGCGCATTTTCTCTATACT 59.010 43.478 8.75 0.00 0.00 2.12
796 799 4.449068 CCATCGCGCATTTTCTCTATACTT 59.551 41.667 8.75 0.00 0.00 2.24
797 800 5.388890 CCATCGCGCATTTTCTCTATACTTC 60.389 44.000 8.75 0.00 0.00 3.01
799 802 3.659364 CGCGCATTTTCTCTATACTTCGC 60.659 47.826 8.75 0.00 36.10 4.70
800 803 3.363084 GCGCATTTTCTCTATACTTCGCC 60.363 47.826 0.30 0.00 33.74 5.54
801 804 3.121328 CGCATTTTCTCTATACTTCGCCG 60.121 47.826 0.00 0.00 0.00 6.46
802 805 3.363084 GCATTTTCTCTATACTTCGCCGC 60.363 47.826 0.00 0.00 0.00 6.53
803 806 3.513680 TTTTCTCTATACTTCGCCGCA 57.486 42.857 0.00 0.00 0.00 5.69
804 807 3.728076 TTTCTCTATACTTCGCCGCAT 57.272 42.857 0.00 0.00 0.00 4.73
805 808 3.728076 TTCTCTATACTTCGCCGCATT 57.272 42.857 0.00 0.00 0.00 3.56
807 810 4.054780 TCTCTATACTTCGCCGCATTTT 57.945 40.909 0.00 0.00 0.00 1.82
808 811 4.049186 TCTCTATACTTCGCCGCATTTTC 58.951 43.478 0.00 0.00 0.00 2.29
809 812 4.051922 CTCTATACTTCGCCGCATTTTCT 58.948 43.478 0.00 0.00 0.00 2.52
811 814 3.675467 ATACTTCGCCGCATTTTCTTC 57.325 42.857 0.00 0.00 0.00 2.87
812 815 0.165944 ACTTCGCCGCATTTTCTTCG 59.834 50.000 0.00 0.00 0.00 3.79
813 816 0.442310 CTTCGCCGCATTTTCTTCGA 59.558 50.000 0.00 0.00 0.00 3.71
814 817 0.165079 TTCGCCGCATTTTCTTCGAC 59.835 50.000 0.00 0.00 0.00 4.20
815 818 1.577616 CGCCGCATTTTCTTCGACG 60.578 57.895 0.00 0.00 0.00 5.12
816 819 1.495951 GCCGCATTTTCTTCGACGT 59.504 52.632 0.00 0.00 0.00 4.34
817 820 0.717224 GCCGCATTTTCTTCGACGTA 59.283 50.000 0.00 0.00 0.00 3.57
818 821 1.526384 GCCGCATTTTCTTCGACGTAC 60.526 52.381 0.00 0.00 0.00 3.67
819 822 1.990563 CCGCATTTTCTTCGACGTACT 59.009 47.619 0.00 0.00 0.00 2.73
820 823 2.410730 CCGCATTTTCTTCGACGTACTT 59.589 45.455 0.00 0.00 0.00 2.24
821 824 3.395671 CGCATTTTCTTCGACGTACTTG 58.604 45.455 0.00 0.00 0.00 3.16
822 825 3.720920 CGCATTTTCTTCGACGTACTTGG 60.721 47.826 0.00 0.00 0.00 3.61
824 827 1.787012 TTTCTTCGACGTACTTGGCC 58.213 50.000 0.00 0.00 0.00 5.36
825 828 0.675083 TTCTTCGACGTACTTGGCCA 59.325 50.000 0.00 0.00 0.00 5.36
826 829 0.038892 TCTTCGACGTACTTGGCCAC 60.039 55.000 3.88 0.00 0.00 5.01
827 830 0.319211 CTTCGACGTACTTGGCCACA 60.319 55.000 3.88 0.00 0.00 4.17
828 831 0.319083 TTCGACGTACTTGGCCACAT 59.681 50.000 3.88 0.00 0.00 3.21
829 832 0.108992 TCGACGTACTTGGCCACATC 60.109 55.000 3.88 0.00 0.00 3.06
830 833 0.389296 CGACGTACTTGGCCACATCA 60.389 55.000 3.88 0.00 0.00 3.07
831 834 1.076332 GACGTACTTGGCCACATCAC 58.924 55.000 3.88 0.00 0.00 3.06
832 835 0.669318 ACGTACTTGGCCACATCACG 60.669 55.000 20.67 20.67 33.97 4.35
833 836 0.389296 CGTACTTGGCCACATCACGA 60.389 55.000 18.62 0.00 31.23 4.35
834 837 1.739035 CGTACTTGGCCACATCACGAT 60.739 52.381 18.62 0.00 31.23 3.73
835 838 1.933853 GTACTTGGCCACATCACGATC 59.066 52.381 3.88 0.00 0.00 3.69
836 839 0.740868 ACTTGGCCACATCACGATCG 60.741 55.000 14.88 14.88 0.00 3.69
837 840 2.040213 CTTGGCCACATCACGATCGC 62.040 60.000 16.60 0.00 0.00 4.58
838 841 3.630148 GGCCACATCACGATCGCG 61.630 66.667 16.60 5.75 44.79 5.87
840 843 3.976375 CCACATCACGATCGCGCG 61.976 66.667 26.76 26.76 42.48 6.86
843 846 2.652179 CATCACGATCGCGCGACT 60.652 61.111 37.37 23.76 42.48 4.18
844 847 1.368850 CATCACGATCGCGCGACTA 60.369 57.895 37.37 18.66 42.48 2.59
845 848 0.928451 CATCACGATCGCGCGACTAA 60.928 55.000 37.37 19.03 42.48 2.24
846 849 0.248336 ATCACGATCGCGCGACTAAA 60.248 50.000 37.37 19.80 42.48 1.85
847 850 1.129879 TCACGATCGCGCGACTAAAC 61.130 55.000 37.37 21.25 42.48 2.01
849 852 2.212983 CGATCGCGCGACTAAACGT 61.213 57.895 37.37 18.29 35.59 3.99
850 853 1.547596 GATCGCGCGACTAAACGTC 59.452 57.895 37.37 22.84 39.33 4.34
851 854 1.129879 GATCGCGCGACTAAACGTCA 61.130 55.000 37.37 9.15 42.98 4.35
853 856 1.794785 CGCGCGACTAAACGTCAGA 60.795 57.895 28.94 0.00 42.98 3.27
854 857 1.132199 CGCGCGACTAAACGTCAGAT 61.132 55.000 28.94 0.00 42.98 2.90
856 859 1.007319 GCGCGACTAAACGTCAGATTC 60.007 52.381 12.10 0.00 42.98 2.52
858 861 2.526688 CGCGACTAAACGTCAGATTCTC 59.473 50.000 0.00 0.00 42.98 2.87
859 862 3.499048 GCGACTAAACGTCAGATTCTCA 58.501 45.455 4.28 0.00 42.98 3.27
860 863 3.301116 GCGACTAAACGTCAGATTCTCAC 59.699 47.826 4.28 0.00 42.98 3.51
862 865 4.555360 CGACTAAACGTCAGATTCTCACTG 59.445 45.833 4.28 0.00 42.98 3.66
863 866 5.455056 ACTAAACGTCAGATTCTCACTGT 57.545 39.130 4.28 0.00 36.81 3.55
865 868 6.380190 ACTAAACGTCAGATTCTCACTGTAC 58.620 40.000 4.28 0.00 36.81 2.90
866 869 3.473093 ACGTCAGATTCTCACTGTACG 57.527 47.619 0.85 0.85 40.65 3.67
867 870 2.161808 ACGTCAGATTCTCACTGTACGG 59.838 50.000 0.00 0.00 39.98 4.02
868 871 2.161808 CGTCAGATTCTCACTGTACGGT 59.838 50.000 0.04 0.04 36.42 4.83
869 872 3.502920 GTCAGATTCTCACTGTACGGTG 58.497 50.000 26.07 26.07 36.81 4.94
870 873 2.492088 TCAGATTCTCACTGTACGGTGG 59.508 50.000 29.89 21.36 37.75 4.61
873 876 0.963962 TTCTCACTGTACGGTGGGTC 59.036 55.000 29.54 0.00 38.69 4.46
874 877 0.896940 TCTCACTGTACGGTGGGTCC 60.897 60.000 29.54 0.00 38.69 4.46
875 878 1.885163 CTCACTGTACGGTGGGTCCC 61.885 65.000 29.89 0.00 37.75 4.46
877 880 1.459921 ACTGTACGGTGGGTCCCAA 60.460 57.895 13.78 0.00 34.18 4.12
878 881 1.055551 ACTGTACGGTGGGTCCCAAA 61.056 55.000 13.78 0.00 34.18 3.28
879 882 0.326927 CTGTACGGTGGGTCCCAAAT 59.673 55.000 13.78 3.42 34.18 2.32
880 883 0.772384 TGTACGGTGGGTCCCAAATT 59.228 50.000 13.78 1.56 34.18 1.82
881 884 1.145325 TGTACGGTGGGTCCCAAATTT 59.855 47.619 13.78 0.00 34.18 1.82
882 885 1.542472 GTACGGTGGGTCCCAAATTTG 59.458 52.381 13.78 11.40 34.18 2.32
892 895 3.792716 CCAAATTTGGCACGGAGAC 57.207 52.632 23.81 0.00 42.21 3.36
894 897 1.247567 CAAATTTGGCACGGAGACCT 58.752 50.000 10.49 0.00 0.00 3.85
896 899 1.247567 AATTTGGCACGGAGACCTTG 58.752 50.000 0.00 0.00 0.00 3.61
897 900 0.400213 ATTTGGCACGGAGACCTTGA 59.600 50.000 0.00 0.00 0.00 3.02
898 901 0.250295 TTTGGCACGGAGACCTTGAG 60.250 55.000 0.00 0.00 0.00 3.02
899 902 2.435059 GGCACGGAGACCTTGAGC 60.435 66.667 0.00 0.00 0.00 4.26
900 903 2.659610 GCACGGAGACCTTGAGCT 59.340 61.111 0.00 0.00 0.00 4.09
901 904 1.446966 GCACGGAGACCTTGAGCTC 60.447 63.158 6.82 6.82 0.00 4.09
902 905 1.967535 CACGGAGACCTTGAGCTCA 59.032 57.895 13.74 13.74 32.83 4.26
903 906 0.389166 CACGGAGACCTTGAGCTCAC 60.389 60.000 18.03 4.74 32.83 3.51
904 907 0.540830 ACGGAGACCTTGAGCTCACT 60.541 55.000 18.03 10.38 32.83 3.41
905 908 0.172352 CGGAGACCTTGAGCTCACTC 59.828 60.000 18.03 18.65 43.76 3.51
914 917 2.828933 GAGCTCACTCAAACGACCC 58.171 57.895 9.40 0.00 42.93 4.46
915 918 1.006102 AGCTCACTCAAACGACCCG 60.006 57.895 0.00 0.00 0.00 5.28
916 919 1.006571 GCTCACTCAAACGACCCGA 60.007 57.895 0.00 0.00 0.00 5.14
917 920 0.389948 GCTCACTCAAACGACCCGAT 60.390 55.000 0.00 0.00 0.00 4.18
918 921 1.350193 CTCACTCAAACGACCCGATG 58.650 55.000 0.00 0.00 0.00 3.84
919 922 0.037697 TCACTCAAACGACCCGATGG 60.038 55.000 0.00 0.00 37.80 3.51
920 923 0.037697 CACTCAAACGACCCGATGGA 60.038 55.000 0.00 0.00 34.81 3.41
922 925 1.290203 CTCAAACGACCCGATGGATG 58.710 55.000 0.00 0.00 34.81 3.51
923 926 0.107897 TCAAACGACCCGATGGATGG 60.108 55.000 0.00 0.00 34.81 3.51
924 927 0.107897 CAAACGACCCGATGGATGGA 60.108 55.000 0.00 0.00 34.81 3.41
925 928 0.107848 AAACGACCCGATGGATGGAC 60.108 55.000 0.00 0.00 34.81 4.02
926 929 2.027605 CGACCCGATGGATGGACG 59.972 66.667 0.00 0.00 33.89 4.79
927 930 2.280186 GACCCGATGGATGGACGC 60.280 66.667 0.00 0.00 34.81 5.19
928 931 3.080765 ACCCGATGGATGGACGCA 61.081 61.111 0.00 0.00 34.81 5.24
931 934 3.630148 CGATGGATGGACGCACGC 61.630 66.667 0.00 0.00 0.00 5.34
932 935 2.511373 GATGGATGGACGCACGCA 60.511 61.111 0.00 0.00 0.00 5.24
933 936 2.813179 GATGGATGGACGCACGCAC 61.813 63.158 0.00 0.00 0.00 5.34
951 954 2.423677 GCACGCGCGCTAATTAGC 60.424 61.111 32.58 24.79 45.62 3.09
953 956 2.202824 ACGCGCGCTAATTAGCCA 60.203 55.556 32.58 0.00 46.34 4.75
954 957 1.594293 ACGCGCGCTAATTAGCCAT 60.594 52.632 32.58 1.63 46.34 4.40
955 958 1.157870 ACGCGCGCTAATTAGCCATT 61.158 50.000 32.58 1.37 46.34 3.16
957 960 1.193650 CGCGCGCTAATTAGCCATTTA 59.806 47.619 30.48 0.00 46.34 1.40
959 962 2.839474 CGCGCTAATTAGCCATTTAGC 58.161 47.619 27.57 22.14 46.34 3.09
973 5284 4.331968 CCATTTAGCCGCCTATAAATCCA 58.668 43.478 0.00 0.00 30.95 3.41
978 5289 1.682087 GCCGCCTATAAATCCATCCCC 60.682 57.143 0.00 0.00 0.00 4.81
1000 5311 1.732417 TTGCACAAACATCCGCAGCA 61.732 50.000 0.00 0.00 35.47 4.41
1015 5326 0.947244 CAGCAAACACACACCTCCTC 59.053 55.000 0.00 0.00 0.00 3.71
1030 5341 3.262151 ACCTCCTCAAAGGAAGTAGAAGC 59.738 47.826 0.00 0.00 45.28 3.86
1032 5343 4.080638 CCTCCTCAAAGGAAGTAGAAGCAT 60.081 45.833 0.00 0.00 45.28 3.79
1050 5361 1.991264 CATCATCCATCGATCGAGCAC 59.009 52.381 23.84 0.00 0.00 4.40
1071 5382 1.005294 CGAGCAGCAACAATGGCAAC 61.005 55.000 0.00 0.00 0.00 4.17
1072 5383 0.668401 GAGCAGCAACAATGGCAACC 60.668 55.000 0.00 0.00 0.00 3.77
1073 5384 1.069427 GCAGCAACAATGGCAACCA 59.931 52.632 0.00 0.00 38.19 3.67
1074 5385 1.223417 GCAGCAACAATGGCAACCAC 61.223 55.000 0.00 0.00 35.80 4.16
1075 5386 0.600782 CAGCAACAATGGCAACCACC 60.601 55.000 0.00 0.00 35.80 4.61
1076 5387 1.047596 AGCAACAATGGCAACCACCA 61.048 50.000 0.00 0.00 45.82 4.17
1077 5388 0.179062 GCAACAATGGCAACCACCAA 60.179 50.000 0.00 0.00 44.65 3.67
1078 5389 1.745141 GCAACAATGGCAACCACCAAA 60.745 47.619 0.00 0.00 44.65 3.28
1079 5390 2.211806 CAACAATGGCAACCACCAAAG 58.788 47.619 0.00 0.00 44.65 2.77
1080 5391 0.106521 ACAATGGCAACCACCAAAGC 59.893 50.000 0.00 0.00 44.65 3.51
1081 5392 0.603439 CAATGGCAACCACCAAAGCC 60.603 55.000 0.00 0.00 44.65 4.35
1083 5394 3.470433 GGCAACCACCAAAGCCAT 58.530 55.556 0.00 0.00 46.26 4.40
1084 5395 1.004679 GGCAACCACCAAAGCCATG 60.005 57.895 0.00 0.00 46.26 3.66
1085 5396 1.004679 GCAACCACCAAAGCCATGG 60.005 57.895 7.63 7.63 46.38 3.66
1086 5397 1.004679 CAACCACCAAAGCCATGGC 60.005 57.895 30.12 30.12 44.75 4.40
1087 5398 2.216331 AACCACCAAAGCCATGGCC 61.216 57.895 33.14 15.39 44.75 5.36
1088 5399 2.284112 CCACCAAAGCCATGGCCT 60.284 61.111 33.14 19.03 44.75 5.19
1225 5554 1.686355 ACCTATCTGAGCTCGGACTG 58.314 55.000 27.38 20.62 33.47 3.51
1285 5614 2.282958 AACCTGGCCGACGAGAGA 60.283 61.111 0.00 0.00 0.00 3.10
1540 5869 3.441010 CGCGCGCAAAACTTCACG 61.441 61.111 32.61 6.38 0.00 4.35
1640 6077 2.331132 GGCTGCTGCTGTTGGAGTC 61.331 63.158 15.64 0.00 39.59 3.36
1686 9137 4.730657 ACTTATACTGTACGTGCTGTGTC 58.269 43.478 22.78 0.00 0.00 3.67
1730 10513 9.920949 GTGACATCTTCTGCACTTAGAGCATCT 62.921 44.444 4.61 0.00 41.82 2.90
1763 10546 6.092807 CACCTAGCTAATTTGGTCTCTCAAAC 59.907 42.308 0.00 0.00 39.13 2.93
1767 10550 4.691216 GCTAATTTGGTCTCTCAAACGTCT 59.309 41.667 0.00 0.00 39.13 4.18
1769 10552 3.536956 TTTGGTCTCTCAAACGTCTGT 57.463 42.857 0.00 0.00 32.39 3.41
1799 10582 5.606348 TTTTCCTGCAAAATAACCACACT 57.394 34.783 0.00 0.00 0.00 3.55
1902 10689 1.063972 GAACACGCACAGCAGCAAA 59.936 52.632 0.00 0.00 0.00 3.68
1903 10690 0.318107 GAACACGCACAGCAGCAAAT 60.318 50.000 0.00 0.00 0.00 2.32
1904 10691 0.595567 AACACGCACAGCAGCAAATG 60.596 50.000 0.00 0.00 0.00 2.32
1905 10692 1.283487 CACGCACAGCAGCAAATGA 59.717 52.632 0.00 0.00 0.00 2.57
1907 10694 0.039798 ACGCACAGCAGCAAATGAAG 60.040 50.000 0.00 0.00 0.00 3.02
1908 10695 0.039798 CGCACAGCAGCAAATGAAGT 60.040 50.000 0.00 0.00 0.00 3.01
1909 10696 1.415374 GCACAGCAGCAAATGAAGTG 58.585 50.000 0.00 0.00 37.91 3.16
1978 11882 4.478371 CCGGATGGAGCAGCAGCA 62.478 66.667 3.17 0.00 45.49 4.41
1993 11897 4.500116 GCAGTCGGAGGGTCGAGC 62.500 72.222 5.93 5.93 40.01 5.03
2018 11922 1.061411 CAACGCGCACATCCATCAG 59.939 57.895 5.73 0.00 0.00 2.90
2019 11923 1.079197 AACGCGCACATCCATCAGA 60.079 52.632 5.73 0.00 0.00 3.27
2020 11924 1.086067 AACGCGCACATCCATCAGAG 61.086 55.000 5.73 0.00 0.00 3.35
2021 11925 2.879070 CGCGCACATCCATCAGAGC 61.879 63.158 8.75 0.00 0.00 4.09
2022 11926 1.816679 GCGCACATCCATCAGAGCA 60.817 57.895 0.30 0.00 0.00 4.26
2023 11927 2.012237 CGCACATCCATCAGAGCAC 58.988 57.895 0.00 0.00 0.00 4.40
2024 11928 1.759293 CGCACATCCATCAGAGCACG 61.759 60.000 0.00 0.00 0.00 5.34
2025 11929 0.742281 GCACATCCATCAGAGCACGT 60.742 55.000 0.00 0.00 0.00 4.49
2026 11930 1.004595 CACATCCATCAGAGCACGTG 58.995 55.000 12.28 12.28 0.00 4.49
2027 11931 0.742281 ACATCCATCAGAGCACGTGC 60.742 55.000 32.79 32.79 42.49 5.34
2037 11941 4.030452 GCACGTGCTGACCTTGCC 62.030 66.667 32.55 0.00 38.21 4.52
2038 11942 3.716006 CACGTGCTGACCTTGCCG 61.716 66.667 0.82 0.00 0.00 5.69
2039 11943 4.235762 ACGTGCTGACCTTGCCGT 62.236 61.111 0.00 0.00 34.42 5.68
2040 11944 3.414700 CGTGCTGACCTTGCCGTC 61.415 66.667 0.00 0.00 0.00 4.79
2041 11945 3.050275 GTGCTGACCTTGCCGTCC 61.050 66.667 0.00 0.00 31.35 4.79
2042 11946 4.680237 TGCTGACCTTGCCGTCCG 62.680 66.667 0.00 0.00 31.35 4.79
2044 11948 3.691342 CTGACCTTGCCGTCCGGA 61.691 66.667 10.46 0.00 37.50 5.14
2045 11949 3.649277 CTGACCTTGCCGTCCGGAG 62.649 68.421 3.06 0.00 37.50 4.63
2059 11963 3.479269 GGAGCGCGCACACTACAC 61.479 66.667 35.10 9.27 0.00 2.90
2060 11964 3.827784 GAGCGCGCACACTACACG 61.828 66.667 35.10 0.00 0.00 4.49
2069 11973 4.485834 CACTACACGCGGCGGCTA 62.486 66.667 27.37 13.53 36.88 3.93
2070 11974 4.189188 ACTACACGCGGCGGCTAG 62.189 66.667 27.37 23.24 36.88 3.42
2071 11975 4.189188 CTACACGCGGCGGCTAGT 62.189 66.667 27.37 19.74 36.88 2.57
2072 11976 4.183686 TACACGCGGCGGCTAGTC 62.184 66.667 27.37 0.00 36.88 2.59
2157 12061 2.202676 CGCGAGCTCCTCTCCAAC 60.203 66.667 8.47 0.00 38.62 3.77
2158 12062 2.202676 GCGAGCTCCTCTCCAACG 60.203 66.667 8.47 0.00 38.62 4.10
2159 12063 2.995872 GCGAGCTCCTCTCCAACGT 61.996 63.158 8.47 0.00 38.62 3.99
2160 12064 1.153939 CGAGCTCCTCTCCAACGTG 60.154 63.158 8.47 0.00 38.62 4.49
2161 12065 1.216710 GAGCTCCTCTCCAACGTGG 59.783 63.158 0.87 0.00 39.43 4.94
2162 12066 1.228894 AGCTCCTCTCCAACGTGGA 60.229 57.895 0.00 0.00 45.98 4.02
2169 12073 2.031012 TCCAACGTGGAGCAGCAG 59.969 61.111 0.00 0.00 42.67 4.24
2170 12074 3.052082 CCAACGTGGAGCAGCAGG 61.052 66.667 0.00 0.00 40.96 4.85
2171 12075 3.730761 CAACGTGGAGCAGCAGGC 61.731 66.667 0.00 0.00 45.30 4.85
2219 12123 2.892425 CAACGCGCCTCCTCCATC 60.892 66.667 5.73 0.00 0.00 3.51
2220 12124 4.162690 AACGCGCCTCCTCCATCC 62.163 66.667 5.73 0.00 0.00 3.51
2222 12126 4.899239 CGCGCCTCCTCCATCCAC 62.899 72.222 0.00 0.00 0.00 4.02
2223 12127 4.899239 GCGCCTCCTCCATCCACG 62.899 72.222 0.00 0.00 0.00 4.94
2224 12128 4.899239 CGCCTCCTCCATCCACGC 62.899 72.222 0.00 0.00 0.00 5.34
2225 12129 3.474570 GCCTCCTCCATCCACGCT 61.475 66.667 0.00 0.00 0.00 5.07
2226 12130 2.503061 CCTCCTCCATCCACGCTG 59.497 66.667 0.00 0.00 0.00 5.18
2227 12131 2.362369 CCTCCTCCATCCACGCTGT 61.362 63.158 0.00 0.00 0.00 4.40
2228 12132 1.142748 CTCCTCCATCCACGCTGTC 59.857 63.158 0.00 0.00 0.00 3.51
2229 12133 2.202797 CCTCCATCCACGCTGTCG 60.203 66.667 0.00 0.00 42.43 4.35
2230 12134 2.887568 CTCCATCCACGCTGTCGC 60.888 66.667 0.00 0.00 39.84 5.19
2231 12135 4.451150 TCCATCCACGCTGTCGCC 62.451 66.667 0.00 0.00 39.84 5.54
2232 12136 4.758251 CCATCCACGCTGTCGCCA 62.758 66.667 0.00 0.00 39.84 5.69
2233 12137 3.190849 CATCCACGCTGTCGCCAG 61.191 66.667 0.00 0.00 41.91 4.85
2257 12161 4.100084 CCTCCGCCCATGCTGTCA 62.100 66.667 0.00 0.00 34.43 3.58
2258 12162 2.821366 CTCCGCCCATGCTGTCAC 60.821 66.667 0.00 0.00 34.43 3.67
2259 12163 4.408821 TCCGCCCATGCTGTCACC 62.409 66.667 0.00 0.00 34.43 4.02
2260 12164 4.720902 CCGCCCATGCTGTCACCA 62.721 66.667 0.00 0.00 34.43 4.17
2261 12165 2.438975 CGCCCATGCTGTCACCAT 60.439 61.111 0.00 0.00 34.43 3.55
2262 12166 2.475466 CGCCCATGCTGTCACCATC 61.475 63.158 0.00 0.00 34.43 3.51
2263 12167 2.123428 GCCCATGCTGTCACCATCC 61.123 63.158 0.00 0.00 33.53 3.51
2264 12168 1.820906 CCCATGCTGTCACCATCCG 60.821 63.158 0.00 0.00 0.00 4.18
2265 12169 2.475466 CCATGCTGTCACCATCCGC 61.475 63.158 0.00 0.00 0.00 5.54
2266 12170 2.124570 ATGCTGTCACCATCCGCC 60.125 61.111 0.00 0.00 0.00 6.13
2267 12171 2.673200 ATGCTGTCACCATCCGCCT 61.673 57.895 0.00 0.00 0.00 5.52
2268 12172 2.512515 GCTGTCACCATCCGCCTC 60.513 66.667 0.00 0.00 0.00 4.70
2269 12173 2.187946 CTGTCACCATCCGCCTCC 59.812 66.667 0.00 0.00 0.00 4.30
2270 12174 2.284625 TGTCACCATCCGCCTCCT 60.285 61.111 0.00 0.00 0.00 3.69
2271 12175 2.303549 CTGTCACCATCCGCCTCCTC 62.304 65.000 0.00 0.00 0.00 3.71
2272 12176 2.764128 TCACCATCCGCCTCCTCC 60.764 66.667 0.00 0.00 0.00 4.30
2273 12177 4.227134 CACCATCCGCCTCCTCCG 62.227 72.222 0.00 0.00 0.00 4.63
2311 12215 2.524569 CCAAGGGCAAAATTTCGTGT 57.475 45.000 0.00 0.00 0.00 4.49
2312 12216 2.832563 CCAAGGGCAAAATTTCGTGTT 58.167 42.857 0.00 0.00 0.00 3.32
2313 12217 3.202097 CCAAGGGCAAAATTTCGTGTTT 58.798 40.909 0.00 0.00 0.00 2.83
2314 12218 3.625313 CCAAGGGCAAAATTTCGTGTTTT 59.375 39.130 0.00 0.00 0.00 2.43
2315 12219 4.495514 CCAAGGGCAAAATTTCGTGTTTTG 60.496 41.667 14.02 14.02 45.01 2.44
2316 12220 4.130286 AGGGCAAAATTTCGTGTTTTGA 57.870 36.364 19.19 0.00 45.02 2.69
2318 12222 4.190304 GGCAAAATTTCGTGTTTTGACC 57.810 40.909 19.19 16.15 44.81 4.02
2319 12223 3.001838 GGCAAAATTTCGTGTTTTGACCC 59.998 43.478 19.19 11.78 44.81 4.46
2320 12224 3.868661 GCAAAATTTCGTGTTTTGACCCT 59.131 39.130 19.19 0.00 45.02 4.34
2321 12225 4.331443 GCAAAATTTCGTGTTTTGACCCTT 59.669 37.500 19.19 0.00 45.02 3.95
2322 12226 5.163804 GCAAAATTTCGTGTTTTGACCCTTT 60.164 36.000 19.19 0.00 45.02 3.11
2323 12227 6.247176 CAAAATTTCGTGTTTTGACCCTTTG 58.753 36.000 13.46 0.00 45.02 2.77
2324 12228 2.570442 TTCGTGTTTTGACCCTTTGC 57.430 45.000 0.00 0.00 0.00 3.68
2325 12229 1.464734 TCGTGTTTTGACCCTTTGCA 58.535 45.000 0.00 0.00 0.00 4.08
2326 12230 2.028130 TCGTGTTTTGACCCTTTGCAT 58.972 42.857 0.00 0.00 0.00 3.96
2327 12231 2.126467 CGTGTTTTGACCCTTTGCATG 58.874 47.619 0.00 0.00 0.00 4.06
2328 12232 2.481104 CGTGTTTTGACCCTTTGCATGT 60.481 45.455 0.00 0.00 0.00 3.21
2329 12233 3.243234 CGTGTTTTGACCCTTTGCATGTA 60.243 43.478 0.00 0.00 0.00 2.29
2330 12234 4.558496 CGTGTTTTGACCCTTTGCATGTAT 60.558 41.667 0.00 0.00 0.00 2.29
2331 12235 5.335269 CGTGTTTTGACCCTTTGCATGTATA 60.335 40.000 0.00 0.00 0.00 1.47
2332 12236 6.451393 GTGTTTTGACCCTTTGCATGTATAA 58.549 36.000 0.00 0.00 0.00 0.98
2333 12237 6.926272 GTGTTTTGACCCTTTGCATGTATAAA 59.074 34.615 0.00 0.00 0.00 1.40
2334 12238 7.439655 GTGTTTTGACCCTTTGCATGTATAAAA 59.560 33.333 0.00 0.00 0.00 1.52
2335 12239 8.153550 TGTTTTGACCCTTTGCATGTATAAAAT 58.846 29.630 0.00 0.00 0.00 1.82
2336 12240 8.655970 GTTTTGACCCTTTGCATGTATAAAATC 58.344 33.333 0.00 0.00 0.00 2.17
2337 12241 7.716799 TTGACCCTTTGCATGTATAAAATCT 57.283 32.000 0.00 0.00 0.00 2.40
2338 12242 7.099266 TGACCCTTTGCATGTATAAAATCTG 57.901 36.000 0.00 0.00 0.00 2.90
2339 12243 6.096705 TGACCCTTTGCATGTATAAAATCTGG 59.903 38.462 0.00 0.00 0.00 3.86
2340 12244 6.194235 ACCCTTTGCATGTATAAAATCTGGA 58.806 36.000 0.00 0.00 0.00 3.86
2341 12245 6.840705 ACCCTTTGCATGTATAAAATCTGGAT 59.159 34.615 0.00 0.00 0.00 3.41
2342 12246 7.014615 ACCCTTTGCATGTATAAAATCTGGATC 59.985 37.037 0.00 0.00 0.00 3.36
2343 12247 7.232127 CCCTTTGCATGTATAAAATCTGGATCT 59.768 37.037 0.00 0.00 0.00 2.75
2344 12248 8.080417 CCTTTGCATGTATAAAATCTGGATCTG 58.920 37.037 0.00 0.00 0.00 2.90
2345 12249 8.750515 TTTGCATGTATAAAATCTGGATCTGA 57.249 30.769 0.00 0.00 0.00 3.27
2346 12250 7.734924 TGCATGTATAAAATCTGGATCTGAC 57.265 36.000 0.00 0.00 0.00 3.51
2347 12251 6.712095 TGCATGTATAAAATCTGGATCTGACC 59.288 38.462 0.00 0.00 0.00 4.02
2348 12252 6.150140 GCATGTATAAAATCTGGATCTGACCC 59.850 42.308 0.00 0.00 0.00 4.46
2349 12253 6.187727 TGTATAAAATCTGGATCTGACCCC 57.812 41.667 0.00 0.00 0.00 4.95
2350 12254 2.717639 AAAATCTGGATCTGACCCCG 57.282 50.000 0.00 0.00 0.00 5.73
2351 12255 1.584724 AAATCTGGATCTGACCCCGT 58.415 50.000 0.00 0.00 0.00 5.28
2352 12256 1.584724 AATCTGGATCTGACCCCGTT 58.415 50.000 0.00 0.00 0.00 4.44
2353 12257 1.584724 ATCTGGATCTGACCCCGTTT 58.415 50.000 0.00 0.00 0.00 3.60
2354 12258 0.613260 TCTGGATCTGACCCCGTTTG 59.387 55.000 0.00 0.00 0.00 2.93
2355 12259 0.392998 CTGGATCTGACCCCGTTTGG 60.393 60.000 0.00 0.00 0.00 3.28
2356 12260 0.838554 TGGATCTGACCCCGTTTGGA 60.839 55.000 0.00 0.00 37.49 3.53
2357 12261 0.546598 GGATCTGACCCCGTTTGGAT 59.453 55.000 0.00 0.00 37.49 3.41
2358 12262 1.064685 GGATCTGACCCCGTTTGGATT 60.065 52.381 0.00 0.00 37.49 3.01
2359 12263 2.620627 GGATCTGACCCCGTTTGGATTT 60.621 50.000 0.00 0.00 37.49 2.17
2360 12264 2.668144 TCTGACCCCGTTTGGATTTT 57.332 45.000 0.00 0.00 37.49 1.82
2361 12265 2.952116 TCTGACCCCGTTTGGATTTTT 58.048 42.857 0.00 0.00 37.49 1.94
2387 12291 7.770366 TTTAAATCTGACCCTTTTTCCTACC 57.230 36.000 0.00 0.00 0.00 3.18
2388 12292 3.629142 ATCTGACCCTTTTTCCTACCG 57.371 47.619 0.00 0.00 0.00 4.02
2389 12293 1.002773 TCTGACCCTTTTTCCTACCGC 59.997 52.381 0.00 0.00 0.00 5.68
2390 12294 0.037160 TGACCCTTTTTCCTACCGCC 59.963 55.000 0.00 0.00 0.00 6.13
2391 12295 0.037160 GACCCTTTTTCCTACCGCCA 59.963 55.000 0.00 0.00 0.00 5.69
2392 12296 0.037734 ACCCTTTTTCCTACCGCCAG 59.962 55.000 0.00 0.00 0.00 4.85
2393 12297 0.679960 CCCTTTTTCCTACCGCCAGG 60.680 60.000 0.00 0.00 45.13 4.45
2394 12298 0.679960 CCTTTTTCCTACCGCCAGGG 60.680 60.000 1.15 0.00 43.47 4.45
2395 12299 0.679960 CTTTTTCCTACCGCCAGGGG 60.680 60.000 0.00 0.00 43.47 4.79
2396 12300 2.144859 TTTTTCCTACCGCCAGGGGG 62.145 60.000 21.32 21.32 43.47 5.40
2410 12314 3.942439 GGGGGCGGCAGTAGGATC 61.942 72.222 12.47 0.00 0.00 3.36
2411 12315 3.161450 GGGGCGGCAGTAGGATCA 61.161 66.667 12.47 0.00 0.00 2.92
2412 12316 2.423446 GGGCGGCAGTAGGATCAG 59.577 66.667 12.47 0.00 0.00 2.90
2413 12317 2.423446 GGCGGCAGTAGGATCAGG 59.577 66.667 3.07 0.00 0.00 3.86
2414 12318 2.280457 GCGGCAGTAGGATCAGGC 60.280 66.667 0.00 0.00 0.00 4.85
2415 12319 3.094062 GCGGCAGTAGGATCAGGCA 62.094 63.158 0.00 0.00 0.00 4.75
2416 12320 1.522092 CGGCAGTAGGATCAGGCAA 59.478 57.895 0.00 0.00 0.00 4.52
2417 12321 0.811616 CGGCAGTAGGATCAGGCAAC 60.812 60.000 0.00 0.00 0.00 4.17
2418 12322 0.464554 GGCAGTAGGATCAGGCAACC 60.465 60.000 0.00 0.00 37.17 3.77
2419 12323 0.543749 GCAGTAGGATCAGGCAACCT 59.456 55.000 0.00 0.00 37.76 3.50
2420 12324 1.762957 GCAGTAGGATCAGGCAACCTA 59.237 52.381 0.00 0.00 35.52 3.08
2422 12326 2.912690 GTAGGATCAGGCAACCTACC 57.087 55.000 0.00 0.00 45.85 3.18
2423 12327 1.068741 GTAGGATCAGGCAACCTACCG 59.931 57.143 0.00 0.00 45.85 4.02
2424 12328 1.523938 GGATCAGGCAACCTACCGC 60.524 63.158 0.00 0.00 29.64 5.68
2430 12334 2.813908 GCAACCTACCGCCACGAG 60.814 66.667 0.00 0.00 0.00 4.18
2431 12335 2.125673 CAACCTACCGCCACGAGG 60.126 66.667 0.00 0.00 36.36 4.63
2449 12353 2.666812 CCCGGCGGTAGGAAACTT 59.333 61.111 26.32 0.00 43.67 2.66
2450 12354 1.899617 CCCGGCGGTAGGAAACTTA 59.100 57.895 26.32 0.00 43.67 2.24
2451 12355 0.466963 CCCGGCGGTAGGAAACTTAT 59.533 55.000 26.32 0.00 43.67 1.73
2452 12356 1.539712 CCCGGCGGTAGGAAACTTATC 60.540 57.143 26.32 0.00 43.67 1.75
2453 12357 1.539712 CCGGCGGTAGGAAACTTATCC 60.540 57.143 19.97 0.00 43.67 2.59
2454 12358 1.137479 CGGCGGTAGGAAACTTATCCA 59.863 52.381 0.00 0.00 42.27 3.41
2455 12359 2.224209 CGGCGGTAGGAAACTTATCCAT 60.224 50.000 0.00 0.00 42.27 3.41
2456 12360 3.139077 GGCGGTAGGAAACTTATCCATG 58.861 50.000 0.00 0.00 42.27 3.66
2457 12361 3.433173 GGCGGTAGGAAACTTATCCATGT 60.433 47.826 0.00 0.00 42.27 3.21
2458 12362 3.808174 GCGGTAGGAAACTTATCCATGTC 59.192 47.826 0.00 0.00 42.27 3.06
2459 12363 4.682320 GCGGTAGGAAACTTATCCATGTCA 60.682 45.833 0.00 0.00 42.27 3.58
2460 12364 5.050490 CGGTAGGAAACTTATCCATGTCAG 58.950 45.833 0.00 0.00 42.27 3.51
2461 12365 4.816925 GGTAGGAAACTTATCCATGTCAGC 59.183 45.833 0.00 0.00 42.27 4.26
2462 12366 4.574674 AGGAAACTTATCCATGTCAGCA 57.425 40.909 0.00 0.00 42.27 4.41
2463 12367 4.521146 AGGAAACTTATCCATGTCAGCAG 58.479 43.478 0.00 0.00 42.27 4.24
2464 12368 3.065925 GGAAACTTATCCATGTCAGCAGC 59.934 47.826 0.00 0.00 39.42 5.25
2465 12369 1.945387 ACTTATCCATGTCAGCAGCG 58.055 50.000 0.00 0.00 0.00 5.18
2466 12370 1.224075 CTTATCCATGTCAGCAGCGG 58.776 55.000 0.00 0.00 0.00 5.52
2467 12371 0.541392 TTATCCATGTCAGCAGCGGT 59.459 50.000 0.00 0.00 0.00 5.68
2468 12372 1.408969 TATCCATGTCAGCAGCGGTA 58.591 50.000 0.00 0.00 0.00 4.02
2469 12373 0.541392 ATCCATGTCAGCAGCGGTAA 59.459 50.000 0.00 0.00 0.00 2.85
2470 12374 0.391130 TCCATGTCAGCAGCGGTAAC 60.391 55.000 0.00 0.00 0.00 2.50
2488 12392 4.477119 GGCCTACCGTCCCCCTCT 62.477 72.222 0.00 0.00 0.00 3.69
2489 12393 2.365237 GCCTACCGTCCCCCTCTT 60.365 66.667 0.00 0.00 0.00 2.85
2490 12394 2.433146 GCCTACCGTCCCCCTCTTC 61.433 68.421 0.00 0.00 0.00 2.87
2491 12395 1.001248 CCTACCGTCCCCCTCTTCA 59.999 63.158 0.00 0.00 0.00 3.02
2492 12396 1.328430 CCTACCGTCCCCCTCTTCAC 61.328 65.000 0.00 0.00 0.00 3.18
2493 12397 0.613853 CTACCGTCCCCCTCTTCACA 60.614 60.000 0.00 0.00 0.00 3.58
2494 12398 0.901580 TACCGTCCCCCTCTTCACAC 60.902 60.000 0.00 0.00 0.00 3.82
2495 12399 2.663196 CGTCCCCCTCTTCACACC 59.337 66.667 0.00 0.00 0.00 4.16
2496 12400 2.955881 CGTCCCCCTCTTCACACCC 61.956 68.421 0.00 0.00 0.00 4.61
2497 12401 1.539124 GTCCCCCTCTTCACACCCT 60.539 63.158 0.00 0.00 0.00 4.34
2498 12402 0.252558 GTCCCCCTCTTCACACCCTA 60.253 60.000 0.00 0.00 0.00 3.53
2499 12403 0.252558 TCCCCCTCTTCACACCCTAC 60.253 60.000 0.00 0.00 0.00 3.18
2500 12404 1.272554 CCCCCTCTTCACACCCTACC 61.273 65.000 0.00 0.00 0.00 3.18
2501 12405 1.614241 CCCCTCTTCACACCCTACCG 61.614 65.000 0.00 0.00 0.00 4.02
2502 12406 1.218316 CCTCTTCACACCCTACCGC 59.782 63.158 0.00 0.00 0.00 5.68
2503 12407 1.218316 CTCTTCACACCCTACCGCC 59.782 63.158 0.00 0.00 0.00 6.13
2504 12408 2.125673 CTTCACACCCTACCGCCG 60.126 66.667 0.00 0.00 0.00 6.46
2505 12409 4.382320 TTCACACCCTACCGCCGC 62.382 66.667 0.00 0.00 0.00 6.53
2513 12417 4.514577 CTACCGCCGCTGGTCCTG 62.515 72.222 9.70 0.00 42.62 3.86
2520 12424 4.514577 CGCTGGTCCTGGCGGTAG 62.515 72.222 17.76 0.00 46.42 3.18
2521 12425 4.840005 GCTGGTCCTGGCGGTAGC 62.840 72.222 0.00 0.00 44.18 3.58
2533 12437 4.279326 GGTAGCCTGTCCGATCCT 57.721 61.111 0.00 0.00 0.00 3.24
2534 12438 3.434053 GGTAGCCTGTCCGATCCTA 57.566 57.895 0.00 0.00 0.00 2.94
2535 12439 0.960286 GGTAGCCTGTCCGATCCTAC 59.040 60.000 0.00 0.00 0.00 3.18
2536 12440 0.960286 GTAGCCTGTCCGATCCTACC 59.040 60.000 0.00 0.00 0.00 3.18
2537 12441 0.536687 TAGCCTGTCCGATCCTACCG 60.537 60.000 0.00 0.00 0.00 4.02
2538 12442 2.728817 CCTGTCCGATCCTACCGC 59.271 66.667 0.00 0.00 0.00 5.68
2539 12443 2.728817 CTGTCCGATCCTACCGCC 59.271 66.667 0.00 0.00 0.00 6.13
2540 12444 2.043752 TGTCCGATCCTACCGCCA 60.044 61.111 0.00 0.00 0.00 5.69
2541 12445 2.076622 CTGTCCGATCCTACCGCCAG 62.077 65.000 0.00 0.00 0.00 4.85
2542 12446 2.520982 TCCGATCCTACCGCCAGG 60.521 66.667 0.00 0.00 45.13 4.45
2543 12447 3.616721 CCGATCCTACCGCCAGGG 61.617 72.222 1.15 0.00 43.47 4.45
2544 12448 2.520982 CGATCCTACCGCCAGGGA 60.521 66.667 1.15 0.00 43.47 4.20
2545 12449 2.857744 CGATCCTACCGCCAGGGAC 61.858 68.421 1.15 0.00 43.47 4.46
2546 12450 2.446036 ATCCTACCGCCAGGGACC 60.446 66.667 1.15 0.00 43.47 4.46
2547 12451 4.791069 TCCTACCGCCAGGGACCC 62.791 72.222 0.59 0.59 43.47 4.46
2548 12452 4.798682 CCTACCGCCAGGGACCCT 62.799 72.222 7.44 7.44 43.47 4.34
2557 12461 2.122813 AGGGACCCTGGCGATAGG 60.123 66.667 13.95 0.00 37.59 2.57
2563 12467 4.559502 CCTGGCGATAGGGTTTGG 57.440 61.111 0.00 0.00 34.06 3.28
2564 12468 1.152963 CCTGGCGATAGGGTTTGGG 60.153 63.158 0.00 0.00 34.06 4.12
2565 12469 1.823899 CTGGCGATAGGGTTTGGGC 60.824 63.158 0.00 0.00 0.00 5.36
2566 12470 2.274104 GGCGATAGGGTTTGGGCA 59.726 61.111 0.00 0.00 0.00 5.36
2567 12471 1.823899 GGCGATAGGGTTTGGGCAG 60.824 63.158 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
133 134 6.042552 TGGTAAATGTTGTCAATTGGTTGGAT 59.957 34.615 5.42 0.00 35.99 3.41
328 330 1.419381 TTAGGCAGGACACACAGACA 58.581 50.000 0.00 0.00 0.00 3.41
334 336 3.245229 ACAAATGGATTAGGCAGGACACA 60.245 43.478 0.00 0.00 0.00 3.72
371 373 5.817296 AGCACTCGTAATAAGATTTGATGCA 59.183 36.000 0.00 0.00 0.00 3.96
408 410 0.657840 GTCGCCACCTATGTCAATGC 59.342 55.000 0.00 0.00 0.00 3.56
414 416 0.908910 TCCAATGTCGCCACCTATGT 59.091 50.000 0.00 0.00 0.00 2.29
424 426 0.255890 ACCTCCCCAATCCAATGTCG 59.744 55.000 0.00 0.00 0.00 4.35
452 454 7.776618 TTGTCTCATATATAACCGTCATCCT 57.223 36.000 0.00 0.00 0.00 3.24
587 589 4.445453 ACGGGGGTTCTTTTCGTATTATC 58.555 43.478 0.00 0.00 32.03 1.75
590 592 2.303890 AGACGGGGGTTCTTTTCGTATT 59.696 45.455 0.00 0.00 34.06 1.89
600 602 1.520494 GACTGAAAAGACGGGGGTTC 58.480 55.000 0.00 0.00 0.00 3.62
601 603 0.109913 GGACTGAAAAGACGGGGGTT 59.890 55.000 0.00 0.00 0.00 4.11
604 606 1.375523 CCGGACTGAAAAGACGGGG 60.376 63.158 0.00 0.00 40.79 5.73
608 610 2.924290 CTCGAATCCGGACTGAAAAGAC 59.076 50.000 6.12 0.00 36.24 3.01
609 611 2.823747 TCTCGAATCCGGACTGAAAAGA 59.176 45.455 6.12 2.37 36.24 2.52
627 630 5.179555 GGTACATTGGAATTTAGCCGATCTC 59.820 44.000 0.00 0.00 0.00 2.75
631 634 3.199677 CGGTACATTGGAATTTAGCCGA 58.800 45.455 0.00 0.00 39.05 5.54
652 655 2.857592 ATGATCAATGAAACGCCAGC 57.142 45.000 0.00 0.00 0.00 4.85
653 656 4.201940 TGCTTATGATCAATGAAACGCCAG 60.202 41.667 0.00 0.00 0.00 4.85
654 657 3.693578 TGCTTATGATCAATGAAACGCCA 59.306 39.130 0.00 0.00 0.00 5.69
656 659 5.160699 TCTGCTTATGATCAATGAAACGC 57.839 39.130 0.00 0.00 0.00 4.84
657 660 6.195983 GCTTTCTGCTTATGATCAATGAAACG 59.804 38.462 0.00 0.00 38.95 3.60
658 661 7.031372 TGCTTTCTGCTTATGATCAATGAAAC 58.969 34.615 0.00 0.00 43.37 2.78
659 662 7.160547 TGCTTTCTGCTTATGATCAATGAAA 57.839 32.000 0.00 4.15 43.37 2.69
660 663 6.762702 TGCTTTCTGCTTATGATCAATGAA 57.237 33.333 0.00 0.00 43.37 2.57
662 665 5.454554 CGTTGCTTTCTGCTTATGATCAATG 59.545 40.000 0.00 0.00 43.37 2.82
663 666 5.449588 CCGTTGCTTTCTGCTTATGATCAAT 60.450 40.000 0.00 0.00 43.37 2.57
665 668 3.374988 CCGTTGCTTTCTGCTTATGATCA 59.625 43.478 0.00 0.00 43.37 2.92
666 669 3.242870 CCCGTTGCTTTCTGCTTATGATC 60.243 47.826 0.00 0.00 43.37 2.92
668 671 2.083774 CCCGTTGCTTTCTGCTTATGA 58.916 47.619 0.00 0.00 43.37 2.15
669 672 2.083774 TCCCGTTGCTTTCTGCTTATG 58.916 47.619 0.00 0.00 43.37 1.90
672 675 1.398692 TTTCCCGTTGCTTTCTGCTT 58.601 45.000 0.00 0.00 43.37 3.91
676 679 3.547746 TGTACTTTTCCCGTTGCTTTCT 58.452 40.909 0.00 0.00 0.00 2.52
677 680 3.974871 TGTACTTTTCCCGTTGCTTTC 57.025 42.857 0.00 0.00 0.00 2.62
680 683 3.202829 TCTTGTACTTTTCCCGTTGCT 57.797 42.857 0.00 0.00 0.00 3.91
681 684 3.500680 TCATCTTGTACTTTTCCCGTTGC 59.499 43.478 0.00 0.00 0.00 4.17
682 685 4.377022 CGTCATCTTGTACTTTTCCCGTTG 60.377 45.833 0.00 0.00 0.00 4.10
683 686 3.744426 CGTCATCTTGTACTTTTCCCGTT 59.256 43.478 0.00 0.00 0.00 4.44
684 687 3.006110 TCGTCATCTTGTACTTTTCCCGT 59.994 43.478 0.00 0.00 0.00 5.28
685 688 3.581755 TCGTCATCTTGTACTTTTCCCG 58.418 45.455 0.00 0.00 0.00 5.14
686 689 3.933332 CCTCGTCATCTTGTACTTTTCCC 59.067 47.826 0.00 0.00 0.00 3.97
687 690 4.817517 TCCTCGTCATCTTGTACTTTTCC 58.182 43.478 0.00 0.00 0.00 3.13
688 691 6.334202 AGATCCTCGTCATCTTGTACTTTTC 58.666 40.000 0.00 0.00 0.00 2.29
691 694 5.923733 AAGATCCTCGTCATCTTGTACTT 57.076 39.130 0.00 0.00 38.84 2.24
692 695 6.358178 TCTAAGATCCTCGTCATCTTGTACT 58.642 40.000 13.21 0.00 40.22 2.73
693 696 6.621316 TCTAAGATCCTCGTCATCTTGTAC 57.379 41.667 13.21 0.00 40.22 2.90
694 697 7.825331 ATTCTAAGATCCTCGTCATCTTGTA 57.175 36.000 13.21 3.02 40.22 2.41
696 699 7.175816 TCCTATTCTAAGATCCTCGTCATCTTG 59.824 40.741 13.21 6.65 40.22 3.02
697 700 7.235079 TCCTATTCTAAGATCCTCGTCATCTT 58.765 38.462 9.93 9.93 42.22 2.40
698 701 6.785076 TCCTATTCTAAGATCCTCGTCATCT 58.215 40.000 0.00 0.00 31.51 2.90
699 702 6.094881 CCTCCTATTCTAAGATCCTCGTCATC 59.905 46.154 0.00 0.00 0.00 2.92
701 704 5.317808 CCTCCTATTCTAAGATCCTCGTCA 58.682 45.833 0.00 0.00 0.00 4.35
702 705 4.157105 GCCTCCTATTCTAAGATCCTCGTC 59.843 50.000 0.00 0.00 0.00 4.20
703 706 4.083565 GCCTCCTATTCTAAGATCCTCGT 58.916 47.826 0.00 0.00 0.00 4.18
704 707 4.157656 CAGCCTCCTATTCTAAGATCCTCG 59.842 50.000 0.00 0.00 0.00 4.63
705 708 4.466015 CCAGCCTCCTATTCTAAGATCCTC 59.534 50.000 0.00 0.00 0.00 3.71
707 710 3.055458 GCCAGCCTCCTATTCTAAGATCC 60.055 52.174 0.00 0.00 0.00 3.36
709 712 2.909662 GGCCAGCCTCCTATTCTAAGAT 59.090 50.000 0.00 0.00 0.00 2.40
710 713 2.330216 GGCCAGCCTCCTATTCTAAGA 58.670 52.381 0.00 0.00 0.00 2.10
713 716 1.343985 TGTGGCCAGCCTCCTATTCTA 60.344 52.381 5.11 0.00 36.94 2.10
714 717 0.621571 TGTGGCCAGCCTCCTATTCT 60.622 55.000 5.11 0.00 36.94 2.40
715 718 0.179034 CTGTGGCCAGCCTCCTATTC 60.179 60.000 5.11 0.00 36.94 1.75
717 720 3.652687 CTGTGGCCAGCCTCCTAT 58.347 61.111 5.11 0.00 36.94 2.57
729 732 4.446413 GGTACCGTCGGGCTGTGG 62.446 72.222 17.28 5.93 36.48 4.17
730 733 1.669049 TATGGTACCGTCGGGCTGTG 61.669 60.000 17.28 0.00 36.48 3.66
731 734 1.380246 TATGGTACCGTCGGGCTGT 60.380 57.895 17.28 0.00 36.48 4.40
733 736 0.183492 TACTATGGTACCGTCGGGCT 59.817 55.000 17.28 0.00 36.48 5.19
734 737 0.312102 GTACTATGGTACCGTCGGGC 59.688 60.000 17.28 7.90 41.61 6.13
765 768 0.459899 AATGCGCGATGGTCAGAGTA 59.540 50.000 12.10 0.00 0.00 2.59
766 769 0.391661 AAATGCGCGATGGTCAGAGT 60.392 50.000 12.10 0.00 0.00 3.24
767 770 0.729116 AAAATGCGCGATGGTCAGAG 59.271 50.000 12.10 0.00 0.00 3.35
768 771 0.726827 GAAAATGCGCGATGGTCAGA 59.273 50.000 12.10 0.00 0.00 3.27
769 772 0.729116 AGAAAATGCGCGATGGTCAG 59.271 50.000 12.10 0.00 0.00 3.51
771 774 1.009829 AGAGAAAATGCGCGATGGTC 58.990 50.000 12.10 0.00 0.00 4.02
772 775 2.309528 TAGAGAAAATGCGCGATGGT 57.690 45.000 12.10 0.00 0.00 3.55
773 776 3.990469 AGTATAGAGAAAATGCGCGATGG 59.010 43.478 12.10 0.00 0.00 3.51
775 778 4.383052 CGAAGTATAGAGAAAATGCGCGAT 59.617 41.667 12.10 0.00 0.00 4.58
776 779 3.729217 CGAAGTATAGAGAAAATGCGCGA 59.271 43.478 12.10 0.00 0.00 5.87
777 780 3.659364 GCGAAGTATAGAGAAAATGCGCG 60.659 47.826 0.00 0.00 0.00 6.86
778 781 3.363084 GGCGAAGTATAGAGAAAATGCGC 60.363 47.826 0.00 0.00 39.95 6.09
779 782 3.121328 CGGCGAAGTATAGAGAAAATGCG 60.121 47.826 0.00 0.00 0.00 4.73
780 783 3.363084 GCGGCGAAGTATAGAGAAAATGC 60.363 47.826 12.98 0.00 0.00 3.56
781 784 3.802139 TGCGGCGAAGTATAGAGAAAATG 59.198 43.478 12.98 0.00 0.00 2.32
783 786 3.513680 TGCGGCGAAGTATAGAGAAAA 57.486 42.857 12.98 0.00 0.00 2.29
784 787 3.728076 ATGCGGCGAAGTATAGAGAAA 57.272 42.857 12.98 0.00 0.00 2.52
788 791 4.054780 AGAAAATGCGGCGAAGTATAGA 57.945 40.909 12.98 0.00 0.00 1.98
789 792 4.606232 CGAAGAAAATGCGGCGAAGTATAG 60.606 45.833 12.98 0.00 0.00 1.31
790 793 3.244345 CGAAGAAAATGCGGCGAAGTATA 59.756 43.478 12.98 0.00 0.00 1.47
791 794 2.030457 CGAAGAAAATGCGGCGAAGTAT 59.970 45.455 12.98 0.00 0.00 2.12
794 797 0.442310 TCGAAGAAAATGCGGCGAAG 59.558 50.000 12.98 0.00 0.00 3.79
795 798 0.165079 GTCGAAGAAAATGCGGCGAA 59.835 50.000 12.98 0.00 39.69 4.70
796 799 1.785321 GTCGAAGAAAATGCGGCGA 59.215 52.632 12.98 0.00 39.69 5.54
797 800 1.577616 CGTCGAAGAAAATGCGGCG 60.578 57.895 0.51 0.51 46.44 6.46
799 802 1.990563 AGTACGTCGAAGAAAATGCGG 59.009 47.619 5.05 0.00 39.69 5.69
800 803 3.395671 CAAGTACGTCGAAGAAAATGCG 58.604 45.455 5.05 0.00 39.69 4.73
801 804 3.732943 CCAAGTACGTCGAAGAAAATGC 58.267 45.455 5.05 0.00 39.69 3.56
802 805 3.424433 GGCCAAGTACGTCGAAGAAAATG 60.424 47.826 5.05 0.00 39.69 2.32
803 806 2.740447 GGCCAAGTACGTCGAAGAAAAT 59.260 45.455 5.05 0.00 39.69 1.82
804 807 2.137523 GGCCAAGTACGTCGAAGAAAA 58.862 47.619 5.05 0.00 39.69 2.29
805 808 1.068895 TGGCCAAGTACGTCGAAGAAA 59.931 47.619 0.61 0.00 39.69 2.52
807 810 0.038892 GTGGCCAAGTACGTCGAAGA 60.039 55.000 7.24 0.00 0.00 2.87
808 811 0.319211 TGTGGCCAAGTACGTCGAAG 60.319 55.000 7.24 0.00 0.00 3.79
809 812 0.319083 ATGTGGCCAAGTACGTCGAA 59.681 50.000 7.24 0.00 0.00 3.71
811 814 0.389296 TGATGTGGCCAAGTACGTCG 60.389 55.000 7.24 0.00 35.98 5.12
812 815 1.076332 GTGATGTGGCCAAGTACGTC 58.924 55.000 7.24 6.68 34.27 4.34
813 816 0.669318 CGTGATGTGGCCAAGTACGT 60.669 55.000 7.24 0.00 0.00 3.57
814 817 0.389296 TCGTGATGTGGCCAAGTACG 60.389 55.000 20.54 20.54 0.00 3.67
815 818 1.933853 GATCGTGATGTGGCCAAGTAC 59.066 52.381 7.24 3.59 0.00 2.73
816 819 1.470805 CGATCGTGATGTGGCCAAGTA 60.471 52.381 7.24 0.00 0.00 2.24
817 820 0.740868 CGATCGTGATGTGGCCAAGT 60.741 55.000 7.24 0.00 0.00 3.16
818 821 2.009108 CGATCGTGATGTGGCCAAG 58.991 57.895 7.24 0.00 0.00 3.61
819 822 2.106074 GCGATCGTGATGTGGCCAA 61.106 57.895 17.81 0.00 0.00 4.52
820 823 2.511373 GCGATCGTGATGTGGCCA 60.511 61.111 17.81 0.00 0.00 5.36
821 824 3.630148 CGCGATCGTGATGTGGCC 61.630 66.667 23.89 0.00 0.00 5.36
822 825 4.285149 GCGCGATCGTGATGTGGC 62.285 66.667 31.43 9.32 38.14 5.01
829 832 1.266089 GTTTAGTCGCGCGATCGTG 59.734 57.895 37.03 23.89 46.68 4.35
830 833 2.212983 CGTTTAGTCGCGCGATCGT 61.213 57.895 37.03 24.62 38.14 3.73
831 834 2.103806 GACGTTTAGTCGCGCGATCG 62.104 60.000 37.03 30.84 40.43 3.69
832 835 1.547596 GACGTTTAGTCGCGCGATC 59.452 57.895 37.03 27.10 40.43 3.69
833 836 3.671723 GACGTTTAGTCGCGCGAT 58.328 55.556 37.03 25.14 40.43 4.58
843 846 5.388111 CGTACAGTGAGAATCTGACGTTTA 58.612 41.667 0.00 0.00 36.81 2.01
844 847 4.227538 CGTACAGTGAGAATCTGACGTTT 58.772 43.478 0.00 0.00 36.81 3.60
845 848 3.366070 CCGTACAGTGAGAATCTGACGTT 60.366 47.826 0.00 0.00 36.16 3.99
846 849 2.161808 CCGTACAGTGAGAATCTGACGT 59.838 50.000 0.00 0.00 36.16 4.34
847 850 2.161808 ACCGTACAGTGAGAATCTGACG 59.838 50.000 0.00 0.00 36.84 4.35
849 852 2.492088 CCACCGTACAGTGAGAATCTGA 59.508 50.000 10.89 0.00 40.34 3.27
850 853 2.417379 CCCACCGTACAGTGAGAATCTG 60.417 54.545 10.89 0.00 40.34 2.90
851 854 1.825474 CCCACCGTACAGTGAGAATCT 59.175 52.381 10.89 0.00 40.34 2.40
853 856 1.549170 GACCCACCGTACAGTGAGAAT 59.451 52.381 10.89 0.00 40.34 2.40
854 857 0.963962 GACCCACCGTACAGTGAGAA 59.036 55.000 10.89 0.00 40.34 2.87
856 859 1.590147 GGACCCACCGTACAGTGAG 59.410 63.158 10.89 0.00 40.34 3.51
858 861 1.760479 TTGGGACCCACCGTACAGTG 61.760 60.000 14.59 2.00 40.11 3.66
859 862 1.055551 TTTGGGACCCACCGTACAGT 61.056 55.000 14.59 0.00 40.11 3.55
860 863 0.326927 ATTTGGGACCCACCGTACAG 59.673 55.000 14.59 0.00 40.11 2.74
862 865 1.542472 CAAATTTGGGACCCACCGTAC 59.458 52.381 14.59 0.00 40.11 3.67
863 866 1.548128 CCAAATTTGGGACCCACCGTA 60.548 52.381 26.87 0.00 44.70 4.02
865 868 1.971418 CCAAATTTGGGACCCACCG 59.029 57.895 26.87 0.00 44.70 4.94
875 878 1.247567 AGGTCTCCGTGCCAAATTTG 58.752 50.000 11.40 11.40 0.00 2.32
877 880 1.202879 TCAAGGTCTCCGTGCCAAATT 60.203 47.619 0.00 0.00 33.18 1.82
878 881 0.400213 TCAAGGTCTCCGTGCCAAAT 59.600 50.000 0.00 0.00 33.18 2.32
879 882 0.250295 CTCAAGGTCTCCGTGCCAAA 60.250 55.000 0.00 0.00 33.18 3.28
880 883 1.371183 CTCAAGGTCTCCGTGCCAA 59.629 57.895 0.00 0.00 33.18 4.52
881 884 3.059982 CTCAAGGTCTCCGTGCCA 58.940 61.111 0.00 0.00 33.18 4.92
882 885 2.435059 GCTCAAGGTCTCCGTGCC 60.435 66.667 0.00 0.00 33.18 5.01
884 887 0.389166 GTGAGCTCAAGGTCTCCGTG 60.389 60.000 20.19 0.00 42.60 4.94
886 889 0.172352 GAGTGAGCTCAAGGTCTCCG 59.828 60.000 20.19 0.00 42.60 4.63
896 899 1.009389 CGGGTCGTTTGAGTGAGCTC 61.009 60.000 6.82 6.82 41.97 4.09
897 900 1.006102 CGGGTCGTTTGAGTGAGCT 60.006 57.895 0.00 0.00 33.30 4.09
898 901 0.389948 ATCGGGTCGTTTGAGTGAGC 60.390 55.000 0.00 0.00 0.00 4.26
899 902 1.350193 CATCGGGTCGTTTGAGTGAG 58.650 55.000 0.00 0.00 0.00 3.51
900 903 0.037697 CCATCGGGTCGTTTGAGTGA 60.038 55.000 0.00 0.00 0.00 3.41
901 904 0.037697 TCCATCGGGTCGTTTGAGTG 60.038 55.000 0.00 0.00 34.93 3.51
902 905 0.902531 ATCCATCGGGTCGTTTGAGT 59.097 50.000 0.00 0.00 34.93 3.41
903 906 1.290203 CATCCATCGGGTCGTTTGAG 58.710 55.000 0.00 0.00 34.93 3.02
904 907 0.107897 CCATCCATCGGGTCGTTTGA 60.108 55.000 0.00 0.00 34.93 2.69
905 908 0.107897 TCCATCCATCGGGTCGTTTG 60.108 55.000 0.00 0.00 34.93 2.93
906 909 0.107848 GTCCATCCATCGGGTCGTTT 60.108 55.000 0.00 0.00 34.93 3.60
907 910 1.520666 GTCCATCCATCGGGTCGTT 59.479 57.895 0.00 0.00 34.93 3.85
908 911 2.782222 CGTCCATCCATCGGGTCGT 61.782 63.158 0.00 0.00 32.34 4.34
909 912 2.027605 CGTCCATCCATCGGGTCG 59.972 66.667 0.00 0.00 34.93 4.79
910 913 2.280186 GCGTCCATCCATCGGGTC 60.280 66.667 0.00 0.00 34.93 4.46
911 914 3.080765 TGCGTCCATCCATCGGGT 61.081 61.111 0.00 0.00 34.93 5.28
913 916 2.961721 CGTGCGTCCATCCATCGG 60.962 66.667 0.00 0.00 0.00 4.18
914 917 3.630148 GCGTGCGTCCATCCATCG 61.630 66.667 0.00 0.00 0.00 3.84
915 918 2.511373 TGCGTGCGTCCATCCATC 60.511 61.111 0.00 0.00 0.00 3.51
916 919 2.819595 GTGCGTGCGTCCATCCAT 60.820 61.111 0.00 0.00 0.00 3.41
934 937 2.423677 GCTAATTAGCGCGCGTGC 60.424 61.111 35.79 35.79 39.82 5.34
943 946 3.412386 AGGCGGCTAAATGGCTAATTAG 58.588 45.455 11.03 8.20 39.48 1.73
944 947 3.502123 AGGCGGCTAAATGGCTAATTA 57.498 42.857 11.03 0.00 39.48 1.40
945 948 2.364972 AGGCGGCTAAATGGCTAATT 57.635 45.000 11.03 0.00 39.48 1.40
946 949 3.721087 ATAGGCGGCTAAATGGCTAAT 57.279 42.857 23.58 0.51 44.94 1.73
947 950 4.627284 TTATAGGCGGCTAAATGGCTAA 57.373 40.909 23.58 12.51 44.94 3.09
948 951 4.627284 TTTATAGGCGGCTAAATGGCTA 57.373 40.909 23.58 6.73 45.70 3.93
950 953 3.128764 GGATTTATAGGCGGCTAAATGGC 59.871 47.826 23.58 12.11 37.94 4.40
951 954 4.331968 TGGATTTATAGGCGGCTAAATGG 58.668 43.478 23.58 0.00 29.87 3.16
953 956 5.193679 GGATGGATTTATAGGCGGCTAAAT 58.806 41.667 23.58 19.82 31.83 1.40
954 957 4.566907 GGGATGGATTTATAGGCGGCTAAA 60.567 45.833 23.58 15.78 0.00 1.85
955 958 3.054655 GGGATGGATTTATAGGCGGCTAA 60.055 47.826 23.58 9.11 0.00 3.09
957 960 1.282157 GGGATGGATTTATAGGCGGCT 59.718 52.381 18.33 18.33 0.00 5.52
959 962 1.406887 CGGGGATGGATTTATAGGCGG 60.407 57.143 0.00 0.00 0.00 6.13
1000 5311 2.241176 TCCTTTGAGGAGGTGTGTGTTT 59.759 45.455 0.00 0.00 40.06 2.83
1015 5326 5.188434 TGGATGATGCTTCTACTTCCTTTG 58.812 41.667 0.88 0.00 0.00 2.77
1030 5341 1.991264 GTGCTCGATCGATGGATGATG 59.009 52.381 19.78 5.28 31.51 3.07
1032 5343 1.268079 GAGTGCTCGATCGATGGATGA 59.732 52.381 19.78 0.00 31.51 2.92
1050 5361 1.136147 GCCATTGTTGCTGCTCGAG 59.864 57.895 8.45 8.45 0.00 4.04
1071 5382 2.284112 AGGCCATGGCTTTGGTGG 60.284 61.111 34.70 0.00 41.60 4.61
1072 5383 2.353610 GGAGGCCATGGCTTTGGTG 61.354 63.158 34.70 0.00 38.98 4.17
1073 5384 2.037847 GGAGGCCATGGCTTTGGT 59.962 61.111 34.70 15.32 38.98 3.67
1074 5385 1.755783 GAGGAGGCCATGGCTTTGG 60.756 63.158 34.70 0.00 38.98 3.28
1075 5386 1.755783 GGAGGAGGCCATGGCTTTG 60.756 63.158 34.70 0.00 38.98 2.77
1076 5387 2.685999 GGAGGAGGCCATGGCTTT 59.314 61.111 34.70 23.56 38.98 3.51
1077 5388 3.424105 GGGAGGAGGCCATGGCTT 61.424 66.667 34.70 29.53 38.98 4.35
1108 5437 4.877619 AGGATCGCGGCGAGGAGA 62.878 66.667 29.64 7.24 39.91 3.71
1225 5554 4.719369 AGCCGGAAGTCGACGCAC 62.719 66.667 5.05 5.56 42.43 5.34
1334 5663 2.360350 CCTGAAGGCGGTGCACAT 60.360 61.111 20.43 0.00 0.00 3.21
1428 5757 3.155167 AAGCGAGGTCGGGGATCC 61.155 66.667 1.92 1.92 40.23 3.36
1540 5869 1.135632 GGCGGATAGATCGTAGCAGAC 60.136 57.143 0.00 0.00 0.00 3.51
1686 9137 2.268076 CCAAACAGACGGGGGCAAG 61.268 63.158 0.00 0.00 0.00 4.01
1730 10513 3.899052 AATTAGCTAGGTGCCGTTGTA 57.101 42.857 4.27 0.00 44.23 2.41
1731 10514 2.747446 CAAATTAGCTAGGTGCCGTTGT 59.253 45.455 4.27 0.00 44.23 3.32
1732 10515 2.097466 CCAAATTAGCTAGGTGCCGTTG 59.903 50.000 4.27 3.93 44.23 4.10
1733 10516 2.290705 ACCAAATTAGCTAGGTGCCGTT 60.291 45.455 4.27 0.00 44.23 4.44
1734 10517 1.280998 ACCAAATTAGCTAGGTGCCGT 59.719 47.619 4.27 0.00 44.23 5.68
1735 10518 1.940613 GACCAAATTAGCTAGGTGCCG 59.059 52.381 7.10 0.00 44.23 5.69
1763 10546 2.744202 CAGGAAAAATGAGGGACAGACG 59.256 50.000 0.00 0.00 0.00 4.18
1767 10550 2.673775 TGCAGGAAAAATGAGGGACA 57.326 45.000 0.00 0.00 0.00 4.02
1769 10552 6.463360 GTTATTTTGCAGGAAAAATGAGGGA 58.537 36.000 3.69 0.00 39.48 4.20
1799 10582 1.982958 GTGAGGGTTCAAAGTAGGGGA 59.017 52.381 0.00 0.00 34.49 4.81
1864 10651 0.741326 TCTACATGCTCCGAGAGTGC 59.259 55.000 0.00 0.00 31.39 4.40
2000 11904 1.061411 CTGATGGATGTGCGCGTTG 59.939 57.895 8.43 0.00 0.00 4.10
2020 11924 4.030452 GGCAAGGTCAGCACGTGC 62.030 66.667 32.79 32.79 42.49 5.34
2021 11925 3.716006 CGGCAAGGTCAGCACGTG 61.716 66.667 12.28 12.28 0.00 4.49
2022 11926 4.235762 ACGGCAAGGTCAGCACGT 62.236 61.111 0.00 0.00 35.27 4.49
2023 11927 3.414700 GACGGCAAGGTCAGCACG 61.415 66.667 0.00 0.00 36.91 5.34
2024 11928 3.050275 GGACGGCAAGGTCAGCAC 61.050 66.667 0.00 0.00 38.70 4.40
2025 11929 4.680237 CGGACGGCAAGGTCAGCA 62.680 66.667 0.00 0.00 38.70 4.41
2027 11931 3.649277 CTCCGGACGGCAAGGTCAG 62.649 68.421 0.00 0.00 38.70 3.51
2028 11932 3.691342 CTCCGGACGGCAAGGTCA 61.691 66.667 0.00 0.00 38.70 4.02
2042 11946 3.479269 GTGTAGTGTGCGCGCTCC 61.479 66.667 33.29 22.45 36.72 4.70
2043 11947 3.827784 CGTGTAGTGTGCGCGCTC 61.828 66.667 33.29 29.03 36.72 5.03
2052 11956 4.485834 TAGCCGCCGCGTGTAGTG 62.486 66.667 12.58 0.00 41.18 2.74
2053 11957 4.189188 CTAGCCGCCGCGTGTAGT 62.189 66.667 12.58 0.00 41.18 2.73
2054 11958 4.189188 ACTAGCCGCCGCGTGTAG 62.189 66.667 12.58 13.53 41.18 2.74
2055 11959 4.183686 GACTAGCCGCCGCGTGTA 62.184 66.667 12.58 1.65 41.18 2.90
2139 12043 4.135153 TTGGAGAGGAGCTCGCGC 62.135 66.667 7.83 0.00 44.91 6.86
2140 12044 2.202676 GTTGGAGAGGAGCTCGCG 60.203 66.667 7.83 0.00 44.91 5.87
2141 12045 2.202676 CGTTGGAGAGGAGCTCGC 60.203 66.667 7.83 2.06 44.91 5.03
2142 12046 1.153939 CACGTTGGAGAGGAGCTCG 60.154 63.158 7.83 0.00 44.91 5.03
2143 12047 1.216710 CCACGTTGGAGAGGAGCTC 59.783 63.158 4.71 4.71 40.96 4.09
2144 12048 1.228894 TCCACGTTGGAGAGGAGCT 60.229 57.895 3.02 0.00 42.67 4.09
2145 12049 3.377656 TCCACGTTGGAGAGGAGC 58.622 61.111 3.02 0.00 42.67 4.70
2152 12056 2.031012 CTGCTGCTCCACGTTGGA 59.969 61.111 0.00 6.57 45.98 3.53
2153 12057 3.052082 CCTGCTGCTCCACGTTGG 61.052 66.667 0.00 0.00 39.43 3.77
2154 12058 3.730761 GCCTGCTGCTCCACGTTG 61.731 66.667 0.00 0.00 36.87 4.10
2202 12106 2.892425 GATGGAGGAGGCGCGTTG 60.892 66.667 8.43 0.00 0.00 4.10
2203 12107 4.162690 GGATGGAGGAGGCGCGTT 62.163 66.667 8.43 0.00 0.00 4.84
2205 12109 4.899239 GTGGATGGAGGAGGCGCG 62.899 72.222 0.00 0.00 0.00 6.86
2206 12110 4.899239 CGTGGATGGAGGAGGCGC 62.899 72.222 0.00 0.00 0.00 6.53
2207 12111 4.899239 GCGTGGATGGAGGAGGCG 62.899 72.222 0.00 0.00 0.00 5.52
2208 12112 3.474570 AGCGTGGATGGAGGAGGC 61.475 66.667 0.00 0.00 0.00 4.70
2209 12113 2.303549 GACAGCGTGGATGGAGGAGG 62.304 65.000 0.00 0.00 0.00 4.30
2210 12114 1.142748 GACAGCGTGGATGGAGGAG 59.857 63.158 0.00 0.00 0.00 3.69
2211 12115 2.710902 CGACAGCGTGGATGGAGGA 61.711 63.158 0.00 0.00 0.00 3.71
2212 12116 2.202797 CGACAGCGTGGATGGAGG 60.203 66.667 0.00 0.00 0.00 4.30
2213 12117 2.887568 GCGACAGCGTGGATGGAG 60.888 66.667 0.00 0.00 40.36 3.86
2214 12118 4.451150 GGCGACAGCGTGGATGGA 62.451 66.667 0.00 0.00 46.35 3.41
2215 12119 4.758251 TGGCGACAGCGTGGATGG 62.758 66.667 0.00 0.00 46.35 3.51
2254 12158 2.501610 GAGGAGGCGGATGGTGAC 59.498 66.667 0.00 0.00 0.00 3.67
2255 12159 2.764128 GGAGGAGGCGGATGGTGA 60.764 66.667 0.00 0.00 0.00 4.02
2256 12160 4.227134 CGGAGGAGGCGGATGGTG 62.227 72.222 0.00 0.00 0.00 4.17
2292 12196 2.524569 ACACGAAATTTTGCCCTTGG 57.475 45.000 5.27 0.00 0.00 3.61
2293 12197 4.331168 TCAAAACACGAAATTTTGCCCTTG 59.669 37.500 5.27 4.96 43.62 3.61
2294 12198 4.331443 GTCAAAACACGAAATTTTGCCCTT 59.669 37.500 5.27 0.00 43.62 3.95
2295 12199 3.868661 GTCAAAACACGAAATTTTGCCCT 59.131 39.130 5.27 0.00 43.62 5.19
2296 12200 3.001838 GGTCAAAACACGAAATTTTGCCC 59.998 43.478 5.27 11.08 43.62 5.36
2297 12201 3.001838 GGGTCAAAACACGAAATTTTGCC 59.998 43.478 5.27 16.17 43.62 4.52
2298 12202 3.868661 AGGGTCAAAACACGAAATTTTGC 59.131 39.130 5.27 11.02 43.62 3.68
2299 12203 6.247176 CAAAGGGTCAAAACACGAAATTTTG 58.753 36.000 3.73 3.73 44.74 2.44
2300 12204 5.163804 GCAAAGGGTCAAAACACGAAATTTT 60.164 36.000 0.00 0.00 32.44 1.82
2301 12205 4.331443 GCAAAGGGTCAAAACACGAAATTT 59.669 37.500 0.00 0.00 32.44 1.82
2302 12206 3.868661 GCAAAGGGTCAAAACACGAAATT 59.131 39.130 0.00 0.00 32.44 1.82
2303 12207 3.118956 TGCAAAGGGTCAAAACACGAAAT 60.119 39.130 0.00 0.00 32.44 2.17
2304 12208 2.231478 TGCAAAGGGTCAAAACACGAAA 59.769 40.909 0.00 0.00 32.44 3.46
2305 12209 1.819288 TGCAAAGGGTCAAAACACGAA 59.181 42.857 0.00 0.00 32.44 3.85
2306 12210 1.464734 TGCAAAGGGTCAAAACACGA 58.535 45.000 0.00 0.00 32.44 4.35
2307 12211 2.126467 CATGCAAAGGGTCAAAACACG 58.874 47.619 0.00 0.00 32.44 4.49
2308 12212 3.177997 ACATGCAAAGGGTCAAAACAC 57.822 42.857 0.00 0.00 0.00 3.32
2309 12213 6.656632 TTATACATGCAAAGGGTCAAAACA 57.343 33.333 0.00 0.00 0.00 2.83
2310 12214 7.954788 TTTTATACATGCAAAGGGTCAAAAC 57.045 32.000 0.00 0.00 0.00 2.43
2311 12215 8.592809 AGATTTTATACATGCAAAGGGTCAAAA 58.407 29.630 0.00 0.00 0.00 2.44
2312 12216 8.034215 CAGATTTTATACATGCAAAGGGTCAAA 58.966 33.333 0.00 0.00 0.00 2.69
2313 12217 7.363705 CCAGATTTTATACATGCAAAGGGTCAA 60.364 37.037 0.00 0.00 0.00 3.18
2314 12218 6.096705 CCAGATTTTATACATGCAAAGGGTCA 59.903 38.462 0.00 0.00 0.00 4.02
2315 12219 6.321181 TCCAGATTTTATACATGCAAAGGGTC 59.679 38.462 0.00 0.00 0.00 4.46
2316 12220 6.194235 TCCAGATTTTATACATGCAAAGGGT 58.806 36.000 0.00 0.00 0.00 4.34
2317 12221 6.713762 TCCAGATTTTATACATGCAAAGGG 57.286 37.500 0.00 0.00 0.00 3.95
2318 12222 8.080417 CAGATCCAGATTTTATACATGCAAAGG 58.920 37.037 0.00 0.00 0.00 3.11
2319 12223 8.843262 TCAGATCCAGATTTTATACATGCAAAG 58.157 33.333 0.00 0.00 0.00 2.77
2320 12224 8.623903 GTCAGATCCAGATTTTATACATGCAAA 58.376 33.333 0.00 0.00 0.00 3.68
2321 12225 7.229306 GGTCAGATCCAGATTTTATACATGCAA 59.771 37.037 0.00 0.00 0.00 4.08
2322 12226 6.712095 GGTCAGATCCAGATTTTATACATGCA 59.288 38.462 0.00 0.00 0.00 3.96
2323 12227 6.150140 GGGTCAGATCCAGATTTTATACATGC 59.850 42.308 0.00 0.00 0.00 4.06
2324 12228 6.656693 GGGGTCAGATCCAGATTTTATACATG 59.343 42.308 0.94 0.00 0.00 3.21
2325 12229 6.520742 CGGGGTCAGATCCAGATTTTATACAT 60.521 42.308 0.94 0.00 0.00 2.29
2326 12230 5.221641 CGGGGTCAGATCCAGATTTTATACA 60.222 44.000 0.94 0.00 0.00 2.29
2327 12231 5.221661 ACGGGGTCAGATCCAGATTTTATAC 60.222 44.000 6.89 0.00 0.00 1.47
2328 12232 4.905456 ACGGGGTCAGATCCAGATTTTATA 59.095 41.667 6.89 0.00 0.00 0.98
2329 12233 3.716872 ACGGGGTCAGATCCAGATTTTAT 59.283 43.478 6.89 0.00 0.00 1.40
2330 12234 3.112263 ACGGGGTCAGATCCAGATTTTA 58.888 45.455 6.89 0.00 0.00 1.52
2331 12235 1.916181 ACGGGGTCAGATCCAGATTTT 59.084 47.619 6.89 0.00 0.00 1.82
2332 12236 1.584724 ACGGGGTCAGATCCAGATTT 58.415 50.000 6.89 0.00 0.00 2.17
2333 12237 1.584724 AACGGGGTCAGATCCAGATT 58.415 50.000 6.89 0.00 0.00 2.40
2334 12238 1.210478 CAAACGGGGTCAGATCCAGAT 59.790 52.381 6.89 0.00 0.00 2.90
2335 12239 0.613260 CAAACGGGGTCAGATCCAGA 59.387 55.000 6.89 0.00 0.00 3.86
2336 12240 0.392998 CCAAACGGGGTCAGATCCAG 60.393 60.000 0.94 0.00 0.00 3.86
2337 12241 0.838554 TCCAAACGGGGTCAGATCCA 60.839 55.000 0.94 0.00 37.22 3.41
2338 12242 0.546598 ATCCAAACGGGGTCAGATCC 59.453 55.000 0.00 0.00 37.22 3.36
2339 12243 2.420058 AATCCAAACGGGGTCAGATC 57.580 50.000 0.00 0.00 37.22 2.75
2340 12244 2.899303 AAATCCAAACGGGGTCAGAT 57.101 45.000 0.00 0.00 37.22 2.90
2341 12245 2.668144 AAAATCCAAACGGGGTCAGA 57.332 45.000 0.00 0.00 37.22 3.27
2361 12265 8.644216 GGTAGGAAAAAGGGTCAGATTTAAAAA 58.356 33.333 0.00 0.00 0.00 1.94
2362 12266 7.040271 CGGTAGGAAAAAGGGTCAGATTTAAAA 60.040 37.037 0.00 0.00 0.00 1.52
2363 12267 6.431852 CGGTAGGAAAAAGGGTCAGATTTAAA 59.568 38.462 0.00 0.00 0.00 1.52
2364 12268 5.941647 CGGTAGGAAAAAGGGTCAGATTTAA 59.058 40.000 0.00 0.00 0.00 1.52
2365 12269 5.493809 CGGTAGGAAAAAGGGTCAGATTTA 58.506 41.667 0.00 0.00 0.00 1.40
2366 12270 4.332828 CGGTAGGAAAAAGGGTCAGATTT 58.667 43.478 0.00 0.00 0.00 2.17
2367 12271 3.872630 GCGGTAGGAAAAAGGGTCAGATT 60.873 47.826 0.00 0.00 0.00 2.40
2368 12272 2.355818 GCGGTAGGAAAAAGGGTCAGAT 60.356 50.000 0.00 0.00 0.00 2.90
2369 12273 1.002773 GCGGTAGGAAAAAGGGTCAGA 59.997 52.381 0.00 0.00 0.00 3.27
2370 12274 1.450025 GCGGTAGGAAAAAGGGTCAG 58.550 55.000 0.00 0.00 0.00 3.51
2371 12275 0.037160 GGCGGTAGGAAAAAGGGTCA 59.963 55.000 0.00 0.00 0.00 4.02
2372 12276 0.037160 TGGCGGTAGGAAAAAGGGTC 59.963 55.000 0.00 0.00 0.00 4.46
2373 12277 0.037734 CTGGCGGTAGGAAAAAGGGT 59.962 55.000 0.00 0.00 0.00 4.34
2374 12278 0.679960 CCTGGCGGTAGGAAAAAGGG 60.680 60.000 0.00 0.00 40.42 3.95
2375 12279 0.679960 CCCTGGCGGTAGGAAAAAGG 60.680 60.000 2.18 0.00 40.42 3.11
2376 12280 0.679960 CCCCTGGCGGTAGGAAAAAG 60.680 60.000 2.18 0.00 40.42 2.27
2377 12281 1.381076 CCCCTGGCGGTAGGAAAAA 59.619 57.895 2.18 0.00 40.42 1.94
2378 12282 2.608550 CCCCCTGGCGGTAGGAAAA 61.609 63.158 1.31 0.00 40.42 2.29
2379 12283 3.012722 CCCCCTGGCGGTAGGAAA 61.013 66.667 1.31 0.00 40.42 3.13
2393 12297 3.942439 GATCCTACTGCCGCCCCC 61.942 72.222 0.00 0.00 0.00 5.40
2394 12298 3.161450 TGATCCTACTGCCGCCCC 61.161 66.667 0.00 0.00 0.00 5.80
2395 12299 2.423446 CTGATCCTACTGCCGCCC 59.577 66.667 0.00 0.00 0.00 6.13
2396 12300 2.423446 CCTGATCCTACTGCCGCC 59.577 66.667 0.00 0.00 0.00 6.13
2397 12301 2.280457 GCCTGATCCTACTGCCGC 60.280 66.667 0.00 0.00 0.00 6.53
2398 12302 0.811616 GTTGCCTGATCCTACTGCCG 60.812 60.000 0.00 0.00 0.00 5.69
2399 12303 0.464554 GGTTGCCTGATCCTACTGCC 60.465 60.000 0.00 0.00 0.00 4.85
2400 12304 0.543749 AGGTTGCCTGATCCTACTGC 59.456 55.000 0.00 0.00 29.57 4.40
2401 12305 3.460857 GTAGGTTGCCTGATCCTACTG 57.539 52.381 11.77 0.00 45.78 2.74
2404 12308 1.410004 CGGTAGGTTGCCTGATCCTA 58.590 55.000 0.00 0.00 34.61 2.94
2405 12309 1.972660 GCGGTAGGTTGCCTGATCCT 61.973 60.000 0.00 0.00 34.61 3.24
2406 12310 1.523938 GCGGTAGGTTGCCTGATCC 60.524 63.158 0.00 0.00 34.61 3.36
2407 12311 4.126524 GCGGTAGGTTGCCTGATC 57.873 61.111 0.00 0.00 34.61 2.92
2413 12317 2.813908 CTCGTGGCGGTAGGTTGC 60.814 66.667 0.00 0.00 0.00 4.17
2414 12318 2.125673 CCTCGTGGCGGTAGGTTG 60.126 66.667 0.00 0.00 0.00 3.77
2431 12335 2.242797 TAAGTTTCCTACCGCCGGGC 62.243 60.000 8.57 9.54 36.48 6.13
2432 12336 0.466963 ATAAGTTTCCTACCGCCGGG 59.533 55.000 8.57 0.00 40.11 5.73
2433 12337 1.539712 GGATAAGTTTCCTACCGCCGG 60.540 57.143 0.00 0.00 32.68 6.13
2434 12338 1.137479 TGGATAAGTTTCCTACCGCCG 59.863 52.381 5.91 0.00 36.68 6.46
2435 12339 2.994186 TGGATAAGTTTCCTACCGCC 57.006 50.000 5.91 0.00 36.68 6.13
2436 12340 3.805207 ACATGGATAAGTTTCCTACCGC 58.195 45.455 0.00 0.00 36.68 5.68
2437 12341 5.018539 TGACATGGATAAGTTTCCTACCG 57.981 43.478 0.00 0.00 36.68 4.02
2438 12342 4.816925 GCTGACATGGATAAGTTTCCTACC 59.183 45.833 0.00 0.00 36.68 3.18
2439 12343 5.428253 TGCTGACATGGATAAGTTTCCTAC 58.572 41.667 0.00 0.00 36.68 3.18
2440 12344 5.674525 CTGCTGACATGGATAAGTTTCCTA 58.325 41.667 0.00 0.00 36.68 2.94
2441 12345 4.521146 CTGCTGACATGGATAAGTTTCCT 58.479 43.478 0.00 0.00 36.68 3.36
2442 12346 3.065925 GCTGCTGACATGGATAAGTTTCC 59.934 47.826 0.00 0.00 36.24 3.13
2443 12347 3.242543 CGCTGCTGACATGGATAAGTTTC 60.243 47.826 0.00 0.00 0.00 2.78
2444 12348 2.679837 CGCTGCTGACATGGATAAGTTT 59.320 45.455 0.00 0.00 0.00 2.66
2445 12349 2.283298 CGCTGCTGACATGGATAAGTT 58.717 47.619 0.00 0.00 0.00 2.66
2446 12350 1.473965 CCGCTGCTGACATGGATAAGT 60.474 52.381 0.00 0.00 0.00 2.24
2447 12351 1.224075 CCGCTGCTGACATGGATAAG 58.776 55.000 0.00 0.00 0.00 1.73
2448 12352 0.541392 ACCGCTGCTGACATGGATAA 59.459 50.000 0.00 0.00 0.00 1.75
2449 12353 1.408969 TACCGCTGCTGACATGGATA 58.591 50.000 0.00 0.00 0.00 2.59
2450 12354 0.541392 TTACCGCTGCTGACATGGAT 59.459 50.000 0.00 0.00 0.00 3.41
2451 12355 0.391130 GTTACCGCTGCTGACATGGA 60.391 55.000 0.00 0.00 0.00 3.41
2452 12356 1.695893 CGTTACCGCTGCTGACATGG 61.696 60.000 0.00 0.00 0.00 3.66
2453 12357 1.695893 CCGTTACCGCTGCTGACATG 61.696 60.000 0.00 0.00 0.00 3.21
2454 12358 1.447838 CCGTTACCGCTGCTGACAT 60.448 57.895 0.00 0.00 0.00 3.06
2455 12359 2.048597 CCGTTACCGCTGCTGACA 60.049 61.111 0.00 0.00 0.00 3.58
2456 12360 3.488090 GCCGTTACCGCTGCTGAC 61.488 66.667 0.00 0.00 0.00 3.51
2457 12361 4.752879 GGCCGTTACCGCTGCTGA 62.753 66.667 0.00 0.00 0.00 4.26
2458 12362 3.365291 TAGGCCGTTACCGCTGCTG 62.365 63.158 0.00 0.00 33.69 4.41
2459 12363 3.072468 TAGGCCGTTACCGCTGCT 61.072 61.111 0.00 0.00 33.69 4.24
2460 12364 2.889018 GTAGGCCGTTACCGCTGC 60.889 66.667 0.00 0.00 33.69 5.25
2461 12365 2.202837 GGTAGGCCGTTACCGCTG 60.203 66.667 5.48 0.00 34.24 5.18
2472 12376 2.365237 AAGAGGGGGACGGTAGGC 60.365 66.667 0.00 0.00 0.00 3.93
2473 12377 1.001248 TGAAGAGGGGGACGGTAGG 59.999 63.158 0.00 0.00 0.00 3.18
2474 12378 0.613853 TGTGAAGAGGGGGACGGTAG 60.614 60.000 0.00 0.00 0.00 3.18
2475 12379 0.901580 GTGTGAAGAGGGGGACGGTA 60.902 60.000 0.00 0.00 0.00 4.02
2476 12380 2.203182 TGTGAAGAGGGGGACGGT 59.797 61.111 0.00 0.00 0.00 4.83
2477 12381 2.663196 GTGTGAAGAGGGGGACGG 59.337 66.667 0.00 0.00 0.00 4.79
2478 12382 2.663196 GGTGTGAAGAGGGGGACG 59.337 66.667 0.00 0.00 0.00 4.79
2479 12383 0.252558 TAGGGTGTGAAGAGGGGGAC 60.253 60.000 0.00 0.00 0.00 4.46
2480 12384 0.252558 GTAGGGTGTGAAGAGGGGGA 60.253 60.000 0.00 0.00 0.00 4.81
2481 12385 1.272554 GGTAGGGTGTGAAGAGGGGG 61.273 65.000 0.00 0.00 0.00 5.40
2482 12386 1.614241 CGGTAGGGTGTGAAGAGGGG 61.614 65.000 0.00 0.00 0.00 4.79
2483 12387 1.898154 CGGTAGGGTGTGAAGAGGG 59.102 63.158 0.00 0.00 0.00 4.30
2484 12388 1.218316 GCGGTAGGGTGTGAAGAGG 59.782 63.158 0.00 0.00 0.00 3.69
2485 12389 1.218316 GGCGGTAGGGTGTGAAGAG 59.782 63.158 0.00 0.00 0.00 2.85
2486 12390 2.642254 CGGCGGTAGGGTGTGAAGA 61.642 63.158 0.00 0.00 0.00 2.87
2487 12391 2.125673 CGGCGGTAGGGTGTGAAG 60.126 66.667 0.00 0.00 0.00 3.02
2488 12392 4.382320 GCGGCGGTAGGGTGTGAA 62.382 66.667 9.78 0.00 0.00 3.18
2496 12400 4.514577 CAGGACCAGCGGCGGTAG 62.515 72.222 12.74 7.25 40.22 3.18
2504 12408 4.840005 GCTACCGCCAGGACCAGC 62.840 72.222 0.00 0.00 41.02 4.85
2516 12420 0.960286 GTAGGATCGGACAGGCTACC 59.040 60.000 0.00 0.00 0.00 3.18
2517 12421 0.960286 GGTAGGATCGGACAGGCTAC 59.040 60.000 0.00 0.00 0.00 3.58
2518 12422 0.536687 CGGTAGGATCGGACAGGCTA 60.537 60.000 0.00 0.00 0.00 3.93
2519 12423 1.828660 CGGTAGGATCGGACAGGCT 60.829 63.158 0.00 0.00 0.00 4.58
2520 12424 2.728817 CGGTAGGATCGGACAGGC 59.271 66.667 0.00 0.00 0.00 4.85
2521 12425 2.728817 GCGGTAGGATCGGACAGG 59.271 66.667 0.00 0.00 0.00 4.00
2522 12426 2.076622 CTGGCGGTAGGATCGGACAG 62.077 65.000 0.00 0.00 37.42 3.51
2523 12427 2.043752 TGGCGGTAGGATCGGACA 60.044 61.111 0.00 0.00 0.00 4.02
2524 12428 2.728817 CTGGCGGTAGGATCGGAC 59.271 66.667 0.00 0.00 0.00 4.79
2525 12429 2.520982 CCTGGCGGTAGGATCGGA 60.521 66.667 0.00 0.00 40.42 4.55
2526 12430 3.616721 CCCTGGCGGTAGGATCGG 61.617 72.222 2.18 0.00 40.42 4.18
2527 12431 2.520982 TCCCTGGCGGTAGGATCG 60.521 66.667 2.18 0.00 40.42 3.69
2528 12432 2.508751 GGTCCCTGGCGGTAGGATC 61.509 68.421 2.18 0.00 40.42 3.36
2529 12433 2.446036 GGTCCCTGGCGGTAGGAT 60.446 66.667 2.18 0.00 40.42 3.24
2530 12434 4.791069 GGGTCCCTGGCGGTAGGA 62.791 72.222 0.00 0.00 40.42 2.94
2531 12435 4.798682 AGGGTCCCTGGCGGTAGG 62.799 72.222 10.61 0.00 37.59 3.18
2540 12444 2.122813 CCTATCGCCAGGGTCCCT 60.123 66.667 3.85 3.85 31.47 4.20
2546 12450 1.152963 CCCAAACCCTATCGCCAGG 60.153 63.158 0.00 0.00 35.26 4.45
2547 12451 1.823899 GCCCAAACCCTATCGCCAG 60.824 63.158 0.00 0.00 0.00 4.85
2548 12452 2.274104 GCCCAAACCCTATCGCCA 59.726 61.111 0.00 0.00 0.00 5.69
2549 12453 1.823899 CTGCCCAAACCCTATCGCC 60.824 63.158 0.00 0.00 0.00 5.54
2550 12454 3.827634 CTGCCCAAACCCTATCGC 58.172 61.111 0.00 0.00 0.00 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.