Multiple sequence alignment - TraesCS5B01G492200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G492200 chr5B 100.000 4310 0 0 1 4310 660198265 660202574 0.000000e+00 7960.0
1 TraesCS5B01G492200 chr5B 91.234 616 49 2 2717 3328 476877550 476878164 0.000000e+00 833.0
2 TraesCS5B01G492200 chr5B 87.755 392 45 3 183 572 508018510 508018900 5.080000e-124 455.0
3 TraesCS5B01G492200 chr5B 95.876 97 2 2 1 97 592861353 592861447 5.770000e-34 156.0
4 TraesCS5B01G492200 chr5B 91.228 114 4 6 1 112 648611068 648610959 2.680000e-32 150.0
5 TraesCS5B01G492200 chr5B 95.699 93 3 1 1 93 229024980 229025071 9.660000e-32 148.0
6 TraesCS5B01G492200 chr5B 82.418 182 15 7 3330 3494 476878201 476878382 4.490000e-30 143.0
7 TraesCS5B01G492200 chr5B 93.617 94 4 2 1 93 32829631 32829723 5.810000e-29 139.0
8 TraesCS5B01G492200 chr1D 95.338 3518 114 14 834 4310 350601905 350598397 0.000000e+00 5542.0
9 TraesCS5B01G492200 chr1D 91.898 827 49 9 834 1643 439575198 439576023 0.000000e+00 1140.0
10 TraesCS5B01G492200 chr1D 93.523 772 35 7 1950 2715 439576024 439576786 0.000000e+00 1134.0
11 TraesCS5B01G492200 chr1D 93.256 771 38 6 1950 2715 488141179 488140418 0.000000e+00 1123.0
12 TraesCS5B01G492200 chr1D 91.525 826 53 8 834 1643 488142004 488141180 0.000000e+00 1122.0
13 TraesCS5B01G492200 chr1D 96.000 250 10 0 571 820 350602231 350601982 1.440000e-109 407.0
14 TraesCS5B01G492200 chr1D 94.378 249 14 0 572 820 488142329 488142081 2.430000e-102 383.0
15 TraesCS5B01G492200 chr1D 93.976 249 15 0 572 820 439574873 439575121 1.130000e-100 377.0
16 TraesCS5B01G492200 chr3B 93.851 3513 171 12 834 4310 824904088 824900585 0.000000e+00 5249.0
17 TraesCS5B01G492200 chr3B 93.523 3520 175 14 834 4310 825096597 825093088 0.000000e+00 5188.0
18 TraesCS5B01G492200 chr3B 85.099 604 65 10 1746 2338 539410660 539410071 1.030000e-165 593.0
19 TraesCS5B01G492200 chr3B 93.522 247 16 0 573 819 824905645 824905399 6.810000e-98 368.0
20 TraesCS5B01G492200 chr3B 96.237 186 5 1 1 184 698237618 698237803 1.950000e-78 303.0
21 TraesCS5B01G492200 chr3B 91.150 113 5 4 1 112 177885399 177885291 9.660000e-32 148.0
22 TraesCS5B01G492200 chr7A 92.975 968 49 7 2717 3667 23008973 23009938 0.000000e+00 1393.0
23 TraesCS5B01G492200 chr7A 93.758 769 35 5 1950 2714 23004373 23005132 0.000000e+00 1142.0
24 TraesCS5B01G492200 chr7A 91.585 820 51 10 834 1643 703069029 703069840 0.000000e+00 1116.0
25 TraesCS5B01G492200 chr7A 93.592 671 39 2 2717 3383 703074447 703075117 0.000000e+00 998.0
26 TraesCS5B01G492200 chr7A 93.377 302 19 1 3722 4023 23009937 23010237 3.060000e-121 446.0
27 TraesCS5B01G492200 chr7A 91.722 302 24 1 3722 4023 703094066 703094366 6.670000e-113 418.0
28 TraesCS5B01G492200 chr7A 93.145 248 17 0 573 820 703068705 703068952 8.810000e-97 364.0
29 TraesCS5B01G492200 chr7A 86.765 272 19 6 3405 3667 703093804 703094067 1.960000e-73 287.0
30 TraesCS5B01G492200 chr7A 87.168 226 18 6 4019 4236 23010362 23010584 3.330000e-61 246.0
31 TraesCS5B01G492200 chr2A 92.497 973 52 8 2717 3670 83620009 83619039 0.000000e+00 1373.0
32 TraesCS5B01G492200 chr2A 91.596 821 56 7 834 1643 83625371 83624553 0.000000e+00 1122.0
33 TraesCS5B01G492200 chr2A 92.820 766 42 6 1953 2714 83624549 83623793 0.000000e+00 1098.0
34 TraesCS5B01G492200 chr2A 88.010 392 44 3 183 572 17556677 17557067 1.090000e-125 460.0
35 TraesCS5B01G492200 chr2A 91.391 302 25 1 3722 4023 83619043 83618743 3.100000e-111 412.0
36 TraesCS5B01G492200 chr2A 93.902 246 15 0 573 818 83625694 83625449 5.260000e-99 372.0
37 TraesCS5B01G492200 chr2A 86.667 225 22 4 4019 4236 83618618 83618395 4.310000e-60 243.0
38 TraesCS5B01G492200 chr6D 93.774 771 34 6 1950 2715 447018248 447017487 0.000000e+00 1146.0
39 TraesCS5B01G492200 chr6D 92.010 826 49 8 834 1643 447019073 447018249 0.000000e+00 1144.0
40 TraesCS5B01G492200 chr6D 87.755 392 45 3 183 572 5203993 5204383 5.080000e-124 455.0
41 TraesCS5B01G492200 chr6D 94.378 249 14 0 572 820 447019398 447019150 2.430000e-102 383.0
42 TraesCS5B01G492200 chr7D 93.645 771 35 6 1950 2715 35270206 35269445 0.000000e+00 1140.0
43 TraesCS5B01G492200 chr7D 91.646 826 52 8 834 1643 35271031 35270207 0.000000e+00 1127.0
44 TraesCS5B01G492200 chr7D 91.954 261 19 2 572 832 35271358 35271100 8.810000e-97 364.0
45 TraesCS5B01G492200 chr7D 86.175 217 23 2 1746 1960 5480361 5480150 1.210000e-55 228.0
46 TraesCS5B01G492200 chr2D 93.645 771 35 6 1950 2715 644473570 644472809 0.000000e+00 1140.0
47 TraesCS5B01G492200 chr2D 91.889 826 50 8 834 1643 644474395 644473571 0.000000e+00 1138.0
48 TraesCS5B01G492200 chr2D 93.902 246 15 0 575 820 644474717 644474472 5.260000e-99 372.0
49 TraesCS5B01G492200 chr2D 88.991 109 6 4 1746 1854 4478586 4478688 3.500000e-26 130.0
50 TraesCS5B01G492200 chr1A 92.737 771 42 6 1950 2715 251593690 251592929 0.000000e+00 1101.0
51 TraesCS5B01G492200 chr1A 90.832 829 56 9 834 1643 251594518 251593691 0.000000e+00 1092.0
52 TraesCS5B01G492200 chr1A 88.520 392 42 3 183 572 539291053 539291443 5.040000e-129 472.0
53 TraesCS5B01G492200 chr1B 91.558 616 48 1 2717 3328 373924166 373923551 0.000000e+00 846.0
54 TraesCS5B01G492200 chr1B 97.619 126 3 0 59 184 673998684 673998809 2.610000e-52 217.0
55 TraesCS5B01G492200 chr1B 96.850 127 4 0 60 186 25818679 25818805 3.380000e-51 213.0
56 TraesCS5B01G492200 chr1B 96.875 128 3 1 60 186 665814991 665815118 3.380000e-51 213.0
57 TraesCS5B01G492200 chr1B 82.682 179 14 7 3333 3494 373923511 373923333 4.490000e-30 143.0
58 TraesCS5B01G492200 chr5A 91.071 616 51 1 2717 3328 639729423 639728808 0.000000e+00 830.0
59 TraesCS5B01G492200 chr5A 88.520 392 42 3 183 572 437173987 437174377 5.040000e-129 472.0
60 TraesCS5B01G492200 chr5A 87.500 392 46 3 183 572 633002814 633003204 2.360000e-122 449.0
61 TraesCS5B01G492200 chr5A 83.240 179 13 7 3333 3494 639728768 639728590 9.660000e-32 148.0
62 TraesCS5B01G492200 chr5D 90.076 393 34 5 183 572 525760367 525760757 4.970000e-139 505.0
63 TraesCS5B01G492200 chr3D 84.615 507 67 7 1746 2250 576692083 576691586 1.080000e-135 494.0
64 TraesCS5B01G492200 chr6B 84.466 515 62 6 1746 2252 11170913 11170409 3.870000e-135 492.0
65 TraesCS5B01G492200 chr6B 96.899 129 4 0 60 188 647391109 647390981 2.610000e-52 217.0
66 TraesCS5B01G492200 chr6B 96.899 129 4 0 60 188 647391708 647391580 2.610000e-52 217.0
67 TraesCS5B01G492200 chr6B 94.624 93 4 1 1 93 502744618 502744709 4.490000e-30 143.0
68 TraesCS5B01G492200 chr4A 89.305 374 37 3 201 572 173648688 173648316 2.350000e-127 466.0
69 TraesCS5B01G492200 chr4B 87.755 392 45 3 183 572 2449671 2450061 5.080000e-124 455.0
70 TraesCS5B01G492200 chr4B 76.087 138 24 7 1599 1727 5075679 5075816 3.600000e-06 63.9
71 TraesCS5B01G492200 chr2B 96.899 129 4 0 60 188 688454449 688454577 2.610000e-52 217.0
72 TraesCS5B01G492200 chr2B 97.600 125 3 0 60 184 625250452 625250576 9.390000e-52 215.0
73 TraesCS5B01G492200 chr2B 92.035 113 4 5 1 112 540750104 540749996 2.080000e-33 154.0
74 TraesCS5B01G492200 chr7B 96.154 130 5 0 60 189 652967572 652967443 3.380000e-51 213.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G492200 chr5B 660198265 660202574 4309 False 7960.000000 7960 100.000000 1 4310 1 chr5B.!!$F5 4309
1 TraesCS5B01G492200 chr5B 476877550 476878382 832 False 488.000000 833 86.826000 2717 3494 2 chr5B.!!$F6 777
2 TraesCS5B01G492200 chr1D 350598397 350602231 3834 True 2974.500000 5542 95.669000 571 4310 2 chr1D.!!$R1 3739
3 TraesCS5B01G492200 chr1D 439574873 439576786 1913 False 883.666667 1140 93.132333 572 2715 3 chr1D.!!$F1 2143
4 TraesCS5B01G492200 chr1D 488140418 488142329 1911 True 876.000000 1123 93.053000 572 2715 3 chr1D.!!$R2 2143
5 TraesCS5B01G492200 chr3B 825093088 825096597 3509 True 5188.000000 5188 93.523000 834 4310 1 chr3B.!!$R3 3476
6 TraesCS5B01G492200 chr3B 824900585 824905645 5060 True 2808.500000 5249 93.686500 573 4310 2 chr3B.!!$R4 3737
7 TraesCS5B01G492200 chr3B 539410071 539410660 589 True 593.000000 593 85.099000 1746 2338 1 chr3B.!!$R2 592
8 TraesCS5B01G492200 chr7A 703074447 703075117 670 False 998.000000 998 93.592000 2717 3383 1 chr7A.!!$F1 666
9 TraesCS5B01G492200 chr7A 23004373 23010584 6211 False 806.750000 1393 91.819500 1950 4236 4 chr7A.!!$F2 2286
10 TraesCS5B01G492200 chr7A 703068705 703069840 1135 False 740.000000 1116 92.365000 573 1643 2 chr7A.!!$F3 1070
11 TraesCS5B01G492200 chr7A 703093804 703094366 562 False 352.500000 418 89.243500 3405 4023 2 chr7A.!!$F4 618
12 TraesCS5B01G492200 chr2A 83618395 83625694 7299 True 770.000000 1373 91.478833 573 4236 6 chr2A.!!$R1 3663
13 TraesCS5B01G492200 chr6D 447017487 447019398 1911 True 891.000000 1146 93.387333 572 2715 3 chr6D.!!$R1 2143
14 TraesCS5B01G492200 chr7D 35269445 35271358 1913 True 877.000000 1140 92.415000 572 2715 3 chr7D.!!$R2 2143
15 TraesCS5B01G492200 chr2D 644472809 644474717 1908 True 883.333333 1140 93.145333 575 2715 3 chr2D.!!$R1 2140
16 TraesCS5B01G492200 chr1A 251592929 251594518 1589 True 1096.500000 1101 91.784500 834 2715 2 chr1A.!!$R1 1881
17 TraesCS5B01G492200 chr1B 373923333 373924166 833 True 494.500000 846 87.120000 2717 3494 2 chr1B.!!$R1 777
18 TraesCS5B01G492200 chr5A 639728590 639729423 833 True 489.000000 830 87.155500 2717 3494 2 chr5A.!!$R1 777
19 TraesCS5B01G492200 chr6B 11170409 11170913 504 True 492.000000 492 84.466000 1746 2252 1 chr6B.!!$R1 506
20 TraesCS5B01G492200 chr6B 647390981 647391708 727 True 217.000000 217 96.899000 60 188 2 chr6B.!!$R2 128

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
257 258 0.036010 AAAGGGTGATGCTGAGACGG 60.036 55.0 0.0 0.0 0.00 4.79 F
260 261 0.103208 GGGTGATGCTGAGACGGTAG 59.897 60.0 0.0 0.0 0.00 3.18 F
375 376 0.108186 GATGCACAGTCACGGATGGA 60.108 55.0 0.0 0.0 0.00 3.41 F
485 486 0.109723 ATAACCACCGTTGCACCACT 59.890 50.0 0.0 0.0 33.17 4.00 F
1030 2357 0.118144 AAGGACTGCCCCTCTTCTCT 59.882 55.0 0.0 0.0 34.95 3.10 F
2446 3833 1.079503 GAGGTGAGTGAATGTTCGGC 58.920 55.0 0.0 0.0 0.00 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1433 2788 1.064979 ACACCGGGTGTTGAAACTTCT 60.065 47.619 26.70 0.05 45.08 2.85 R
2126 3496 1.881973 TGAGTGGCACTTGCTGATTTC 59.118 47.619 22.98 6.19 41.70 2.17 R
2213 3584 6.317893 GTGTTTACACCTTCAGGAAAAAGAGA 59.682 38.462 0.00 0.00 40.85 3.10 R
2446 3833 1.789078 GCCACAACTGTGTCAGCCAG 61.789 60.000 8.93 0.00 44.21 4.85 R
2872 8117 0.104304 CCACTATAGCACACCCCGTC 59.896 60.000 0.00 0.00 0.00 4.79 R
3834 9216 1.032014 GCCAGTTTGCCACTTCTGAA 58.968 50.000 0.00 0.00 30.92 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 189 3.133003 GGCTGTTGGAGATGCTCTTACTA 59.867 47.826 0.00 0.00 0.00 1.82
189 190 4.367450 GCTGTTGGAGATGCTCTTACTAG 58.633 47.826 0.00 0.00 0.00 2.57
190 191 4.739137 GCTGTTGGAGATGCTCTTACTAGG 60.739 50.000 0.00 0.00 0.00 3.02
191 192 4.353777 TGTTGGAGATGCTCTTACTAGGT 58.646 43.478 0.00 0.00 0.00 3.08
192 193 4.160439 TGTTGGAGATGCTCTTACTAGGTG 59.840 45.833 0.00 0.00 0.00 4.00
193 194 4.251103 TGGAGATGCTCTTACTAGGTGA 57.749 45.455 0.00 0.00 0.00 4.02
196 197 5.076873 GGAGATGCTCTTACTAGGTGAGAT 58.923 45.833 11.42 4.40 28.21 2.75
197 198 5.048083 GGAGATGCTCTTACTAGGTGAGATG 60.048 48.000 11.42 1.16 28.21 2.90
198 199 4.280677 AGATGCTCTTACTAGGTGAGATGC 59.719 45.833 11.42 8.75 28.21 3.91
199 200 3.636679 TGCTCTTACTAGGTGAGATGCT 58.363 45.455 11.42 0.00 30.41 3.79
200 201 4.026744 TGCTCTTACTAGGTGAGATGCTT 58.973 43.478 11.42 0.00 30.41 3.91
201 202 5.201243 TGCTCTTACTAGGTGAGATGCTTA 58.799 41.667 11.42 0.00 30.41 3.09
202 203 5.067936 TGCTCTTACTAGGTGAGATGCTTAC 59.932 44.000 11.42 0.00 30.41 2.34
203 204 5.067936 GCTCTTACTAGGTGAGATGCTTACA 59.932 44.000 11.42 0.00 28.21 2.41
204 205 6.405953 GCTCTTACTAGGTGAGATGCTTACAA 60.406 42.308 11.42 0.00 28.21 2.41
205 206 7.661536 TCTTACTAGGTGAGATGCTTACAAT 57.338 36.000 0.00 0.00 0.00 2.71
206 207 7.492524 TCTTACTAGGTGAGATGCTTACAATG 58.507 38.462 0.00 0.00 0.00 2.82
207 208 5.683876 ACTAGGTGAGATGCTTACAATGT 57.316 39.130 0.00 0.00 0.00 2.71
208 209 5.423015 ACTAGGTGAGATGCTTACAATGTG 58.577 41.667 0.00 0.00 0.00 3.21
209 210 4.292186 AGGTGAGATGCTTACAATGTGT 57.708 40.909 0.00 0.00 0.00 3.72
210 211 4.005650 AGGTGAGATGCTTACAATGTGTG 58.994 43.478 0.00 0.00 0.00 3.82
211 212 3.426695 GGTGAGATGCTTACAATGTGTGC 60.427 47.826 0.00 0.59 0.00 4.57
212 213 3.438087 GTGAGATGCTTACAATGTGTGCT 59.562 43.478 12.07 1.02 0.00 4.40
213 214 3.437741 TGAGATGCTTACAATGTGTGCTG 59.562 43.478 12.07 0.00 0.00 4.41
214 215 2.163010 AGATGCTTACAATGTGTGCTGC 59.837 45.455 12.07 0.00 0.00 5.25
215 216 1.316651 TGCTTACAATGTGTGCTGCA 58.683 45.000 0.00 0.00 32.24 4.41
216 217 1.267533 TGCTTACAATGTGTGCTGCAG 59.732 47.619 10.11 10.11 31.53 4.41
217 218 1.536766 GCTTACAATGTGTGCTGCAGA 59.463 47.619 20.43 0.00 0.00 4.26
218 219 2.413765 GCTTACAATGTGTGCTGCAGAG 60.414 50.000 20.43 1.73 0.00 3.35
219 220 2.837532 TACAATGTGTGCTGCAGAGA 57.162 45.000 20.43 0.00 0.00 3.10
220 221 1.520494 ACAATGTGTGCTGCAGAGAG 58.480 50.000 20.43 0.00 0.00 3.20
221 222 1.071228 ACAATGTGTGCTGCAGAGAGA 59.929 47.619 20.43 0.00 0.00 3.10
222 223 2.148768 CAATGTGTGCTGCAGAGAGAA 58.851 47.619 20.43 0.00 0.00 2.87
223 224 2.551032 CAATGTGTGCTGCAGAGAGAAA 59.449 45.455 20.43 0.00 0.00 2.52
224 225 2.330440 TGTGTGCTGCAGAGAGAAAA 57.670 45.000 20.43 0.00 0.00 2.29
225 226 2.854963 TGTGTGCTGCAGAGAGAAAAT 58.145 42.857 20.43 0.00 0.00 1.82
226 227 2.551032 TGTGTGCTGCAGAGAGAAAATG 59.449 45.455 20.43 0.00 0.00 2.32
227 228 2.810274 GTGTGCTGCAGAGAGAAAATGA 59.190 45.455 20.43 0.00 0.00 2.57
228 229 3.251729 GTGTGCTGCAGAGAGAAAATGAA 59.748 43.478 20.43 0.00 0.00 2.57
229 230 3.501062 TGTGCTGCAGAGAGAAAATGAAG 59.499 43.478 20.43 0.00 0.00 3.02
230 231 3.079578 TGCTGCAGAGAGAAAATGAAGG 58.920 45.455 20.43 0.00 0.00 3.46
231 232 3.080319 GCTGCAGAGAGAAAATGAAGGT 58.920 45.455 20.43 0.00 0.00 3.50
232 233 3.126686 GCTGCAGAGAGAAAATGAAGGTC 59.873 47.826 20.43 0.00 0.00 3.85
233 234 4.321718 CTGCAGAGAGAAAATGAAGGTCA 58.678 43.478 8.42 0.00 0.00 4.02
234 235 4.914983 TGCAGAGAGAAAATGAAGGTCAT 58.085 39.130 0.00 0.00 39.09 3.06
236 237 5.182570 TGCAGAGAGAAAATGAAGGTCATTG 59.817 40.000 4.32 0.00 45.57 2.82
237 238 5.638783 CAGAGAGAAAATGAAGGTCATTGC 58.361 41.667 4.32 1.20 45.57 3.56
238 239 5.182570 CAGAGAGAAAATGAAGGTCATTGCA 59.817 40.000 4.32 0.00 45.57 4.08
239 240 5.771666 AGAGAGAAAATGAAGGTCATTGCAA 59.228 36.000 0.00 0.00 45.57 4.08
240 241 6.266103 AGAGAGAAAATGAAGGTCATTGCAAA 59.734 34.615 1.71 0.00 45.57 3.68
241 242 6.453092 AGAGAAAATGAAGGTCATTGCAAAG 58.547 36.000 1.71 0.00 45.57 2.77
242 243 5.544650 AGAAAATGAAGGTCATTGCAAAGG 58.455 37.500 1.71 0.00 45.57 3.11
243 244 3.967332 AATGAAGGTCATTGCAAAGGG 57.033 42.857 1.71 0.00 44.68 3.95
244 245 2.380064 TGAAGGTCATTGCAAAGGGT 57.620 45.000 1.71 0.00 0.00 4.34
245 246 1.962807 TGAAGGTCATTGCAAAGGGTG 59.037 47.619 1.71 0.00 0.00 4.61
246 247 2.238521 GAAGGTCATTGCAAAGGGTGA 58.761 47.619 1.71 0.00 0.00 4.02
247 248 2.610438 AGGTCATTGCAAAGGGTGAT 57.390 45.000 1.71 0.00 0.00 3.06
248 249 2.173519 AGGTCATTGCAAAGGGTGATG 58.826 47.619 1.71 0.00 0.00 3.07
249 250 1.404583 GGTCATTGCAAAGGGTGATGC 60.405 52.381 1.71 0.00 42.86 3.91
250 251 1.547372 GTCATTGCAAAGGGTGATGCT 59.453 47.619 1.71 0.00 42.97 3.79
251 252 1.546923 TCATTGCAAAGGGTGATGCTG 59.453 47.619 1.71 0.00 42.97 4.41
252 253 1.546923 CATTGCAAAGGGTGATGCTGA 59.453 47.619 1.71 0.00 42.97 4.26
253 254 1.250328 TTGCAAAGGGTGATGCTGAG 58.750 50.000 0.00 0.00 42.97 3.35
254 255 0.401356 TGCAAAGGGTGATGCTGAGA 59.599 50.000 0.00 0.00 42.97 3.27
255 256 0.807496 GCAAAGGGTGATGCTGAGAC 59.193 55.000 0.00 0.00 39.46 3.36
256 257 1.081892 CAAAGGGTGATGCTGAGACG 58.918 55.000 0.00 0.00 0.00 4.18
257 258 0.036010 AAAGGGTGATGCTGAGACGG 60.036 55.000 0.00 0.00 0.00 4.79
258 259 1.194781 AAGGGTGATGCTGAGACGGT 61.195 55.000 0.00 0.00 0.00 4.83
259 260 0.324368 AGGGTGATGCTGAGACGGTA 60.324 55.000 0.00 0.00 0.00 4.02
260 261 0.103208 GGGTGATGCTGAGACGGTAG 59.897 60.000 0.00 0.00 0.00 3.18
261 262 0.818296 GGTGATGCTGAGACGGTAGT 59.182 55.000 0.00 0.00 0.00 2.73
262 263 1.469940 GGTGATGCTGAGACGGTAGTG 60.470 57.143 0.00 0.00 0.00 2.74
263 264 0.817654 TGATGCTGAGACGGTAGTGG 59.182 55.000 0.00 0.00 0.00 4.00
264 265 1.103803 GATGCTGAGACGGTAGTGGA 58.896 55.000 0.00 0.00 0.00 4.02
265 266 0.818296 ATGCTGAGACGGTAGTGGAC 59.182 55.000 0.00 0.00 0.00 4.02
266 267 0.538746 TGCTGAGACGGTAGTGGACA 60.539 55.000 0.00 0.00 0.00 4.02
267 268 0.818296 GCTGAGACGGTAGTGGACAT 59.182 55.000 0.00 0.00 0.00 3.06
268 269 1.204941 GCTGAGACGGTAGTGGACATT 59.795 52.381 0.00 0.00 0.00 2.71
269 270 2.426024 GCTGAGACGGTAGTGGACATTA 59.574 50.000 0.00 0.00 0.00 1.90
270 271 3.068307 GCTGAGACGGTAGTGGACATTAT 59.932 47.826 0.00 0.00 0.00 1.28
271 272 4.611943 CTGAGACGGTAGTGGACATTATG 58.388 47.826 0.00 0.00 0.00 1.90
272 273 4.274978 TGAGACGGTAGTGGACATTATGA 58.725 43.478 0.00 0.00 0.00 2.15
273 274 4.338400 TGAGACGGTAGTGGACATTATGAG 59.662 45.833 0.00 0.00 0.00 2.90
274 275 3.637229 AGACGGTAGTGGACATTATGAGG 59.363 47.826 0.00 0.00 0.00 3.86
275 276 3.635373 GACGGTAGTGGACATTATGAGGA 59.365 47.826 0.00 0.00 0.00 3.71
276 277 3.637229 ACGGTAGTGGACATTATGAGGAG 59.363 47.826 0.00 0.00 0.00 3.69
277 278 3.553096 CGGTAGTGGACATTATGAGGAGC 60.553 52.174 0.00 0.00 0.00 4.70
278 279 3.388024 GGTAGTGGACATTATGAGGAGCA 59.612 47.826 0.00 0.00 0.00 4.26
279 280 3.834489 AGTGGACATTATGAGGAGCAG 57.166 47.619 0.00 0.00 0.00 4.24
280 281 3.378512 AGTGGACATTATGAGGAGCAGA 58.621 45.455 0.00 0.00 0.00 4.26
281 282 3.776969 AGTGGACATTATGAGGAGCAGAA 59.223 43.478 0.00 0.00 31.38 3.02
282 283 4.225942 AGTGGACATTATGAGGAGCAGAAA 59.774 41.667 0.00 0.00 30.49 2.52
283 284 4.574013 GTGGACATTATGAGGAGCAGAAAG 59.426 45.833 0.00 0.00 30.49 2.62
284 285 4.225942 TGGACATTATGAGGAGCAGAAAGT 59.774 41.667 0.00 0.00 32.92 2.66
285 286 4.813697 GGACATTATGAGGAGCAGAAAGTC 59.186 45.833 0.00 0.00 42.51 3.01
286 287 4.437239 ACATTATGAGGAGCAGAAAGTCG 58.563 43.478 0.00 0.00 30.49 4.18
287 288 4.160439 ACATTATGAGGAGCAGAAAGTCGA 59.840 41.667 0.00 0.00 30.49 4.20
288 289 4.801330 TTATGAGGAGCAGAAAGTCGAA 57.199 40.909 0.00 0.00 0.00 3.71
289 290 2.732412 TGAGGAGCAGAAAGTCGAAG 57.268 50.000 0.00 0.00 0.00 3.79
290 291 1.273606 TGAGGAGCAGAAAGTCGAAGG 59.726 52.381 0.00 0.00 0.00 3.46
291 292 1.546476 GAGGAGCAGAAAGTCGAAGGA 59.454 52.381 0.00 0.00 0.00 3.36
292 293 1.273886 AGGAGCAGAAAGTCGAAGGAC 59.726 52.381 0.00 0.00 43.76 3.85
293 294 1.673329 GGAGCAGAAAGTCGAAGGACC 60.673 57.143 0.00 0.00 44.54 4.46
294 295 0.321996 AGCAGAAAGTCGAAGGACCC 59.678 55.000 0.00 0.00 44.54 4.46
295 296 0.321996 GCAGAAAGTCGAAGGACCCT 59.678 55.000 0.00 0.00 44.54 4.34
296 297 1.941668 GCAGAAAGTCGAAGGACCCTG 60.942 57.143 0.00 0.00 44.54 4.45
297 298 1.618837 CAGAAAGTCGAAGGACCCTGA 59.381 52.381 0.00 0.00 44.54 3.86
298 299 1.619332 AGAAAGTCGAAGGACCCTGAC 59.381 52.381 0.00 1.13 44.54 3.51
299 300 1.619332 GAAAGTCGAAGGACCCTGACT 59.381 52.381 5.31 5.31 44.54 3.41
300 301 1.718280 AAGTCGAAGGACCCTGACTT 58.282 50.000 14.62 14.62 44.48 3.01
301 302 1.258676 AGTCGAAGGACCCTGACTTC 58.741 55.000 5.31 0.00 44.54 3.01
302 303 1.203075 AGTCGAAGGACCCTGACTTCT 60.203 52.381 5.31 0.00 44.54 2.85
303 304 1.619332 GTCGAAGGACCCTGACTTCTT 59.381 52.381 0.00 0.00 40.63 2.52
304 305 1.893801 TCGAAGGACCCTGACTTCTTC 59.106 52.381 0.00 0.00 40.63 2.87
305 306 1.896465 CGAAGGACCCTGACTTCTTCT 59.104 52.381 0.00 0.00 40.63 2.85
306 307 2.300437 CGAAGGACCCTGACTTCTTCTT 59.700 50.000 0.00 0.00 40.63 2.52
307 308 3.244249 CGAAGGACCCTGACTTCTTCTTT 60.244 47.826 0.00 0.00 40.63 2.52
308 309 3.778954 AGGACCCTGACTTCTTCTTTG 57.221 47.619 0.00 0.00 0.00 2.77
309 310 3.318313 AGGACCCTGACTTCTTCTTTGA 58.682 45.455 0.00 0.00 0.00 2.69
310 311 3.326297 AGGACCCTGACTTCTTCTTTGAG 59.674 47.826 0.00 0.00 0.00 3.02
311 312 3.071747 GGACCCTGACTTCTTCTTTGAGT 59.928 47.826 0.00 0.00 0.00 3.41
312 313 4.283722 GGACCCTGACTTCTTCTTTGAGTA 59.716 45.833 0.00 0.00 0.00 2.59
313 314 5.216614 ACCCTGACTTCTTCTTTGAGTAC 57.783 43.478 0.00 0.00 0.00 2.73
314 315 4.238514 CCCTGACTTCTTCTTTGAGTACG 58.761 47.826 0.00 0.00 0.00 3.67
315 316 4.262079 CCCTGACTTCTTCTTTGAGTACGT 60.262 45.833 0.00 0.00 0.00 3.57
316 317 4.681942 CCTGACTTCTTCTTTGAGTACGTG 59.318 45.833 0.00 0.00 0.00 4.49
317 318 4.049186 TGACTTCTTCTTTGAGTACGTGC 58.951 43.478 0.00 0.00 0.00 5.34
318 319 4.202121 TGACTTCTTCTTTGAGTACGTGCT 60.202 41.667 5.62 5.62 0.00 4.40
319 320 4.694339 ACTTCTTCTTTGAGTACGTGCTT 58.306 39.130 7.83 0.00 0.00 3.91
320 321 4.745620 ACTTCTTCTTTGAGTACGTGCTTC 59.254 41.667 7.83 1.98 0.00 3.86
321 322 4.316205 TCTTCTTTGAGTACGTGCTTCA 57.684 40.909 7.83 4.72 0.00 3.02
322 323 4.883083 TCTTCTTTGAGTACGTGCTTCAT 58.117 39.130 7.83 0.00 0.00 2.57
323 324 6.020971 TCTTCTTTGAGTACGTGCTTCATA 57.979 37.500 7.83 2.43 0.00 2.15
324 325 6.452242 TCTTCTTTGAGTACGTGCTTCATAA 58.548 36.000 7.83 0.00 0.00 1.90
325 326 6.586463 TCTTCTTTGAGTACGTGCTTCATAAG 59.414 38.462 7.83 9.14 0.00 1.73
326 327 5.168569 TCTTTGAGTACGTGCTTCATAAGG 58.831 41.667 7.83 2.70 0.00 2.69
327 328 4.794278 TTGAGTACGTGCTTCATAAGGA 57.206 40.909 7.83 0.00 0.00 3.36
328 329 4.794278 TGAGTACGTGCTTCATAAGGAA 57.206 40.909 7.83 0.00 0.00 3.36
339 340 4.627284 TTCATAAGGAAGGACGGTTGAA 57.373 40.909 0.00 0.00 0.00 2.69
340 341 4.202245 TCATAAGGAAGGACGGTTGAAG 57.798 45.455 0.00 0.00 0.00 3.02
341 342 3.835978 TCATAAGGAAGGACGGTTGAAGA 59.164 43.478 0.00 0.00 0.00 2.87
342 343 2.841442 AAGGAAGGACGGTTGAAGAG 57.159 50.000 0.00 0.00 0.00 2.85
343 344 1.718280 AGGAAGGACGGTTGAAGAGT 58.282 50.000 0.00 0.00 0.00 3.24
344 345 2.885616 AGGAAGGACGGTTGAAGAGTA 58.114 47.619 0.00 0.00 0.00 2.59
345 346 3.442076 AGGAAGGACGGTTGAAGAGTAT 58.558 45.455 0.00 0.00 0.00 2.12
346 347 3.195825 AGGAAGGACGGTTGAAGAGTATG 59.804 47.826 0.00 0.00 0.00 2.39
347 348 3.056035 GGAAGGACGGTTGAAGAGTATGT 60.056 47.826 0.00 0.00 0.00 2.29
348 349 4.562963 GGAAGGACGGTTGAAGAGTATGTT 60.563 45.833 0.00 0.00 0.00 2.71
349 350 4.189639 AGGACGGTTGAAGAGTATGTTC 57.810 45.455 0.00 0.00 39.12 3.18
350 351 3.833070 AGGACGGTTGAAGAGTATGTTCT 59.167 43.478 0.00 0.00 39.45 3.01
351 352 3.927142 GGACGGTTGAAGAGTATGTTCTG 59.073 47.826 0.00 0.00 39.45 3.02
352 353 3.926616 ACGGTTGAAGAGTATGTTCTGG 58.073 45.455 0.00 0.00 39.45 3.86
353 354 3.323979 ACGGTTGAAGAGTATGTTCTGGT 59.676 43.478 0.00 0.00 39.45 4.00
354 355 3.679980 CGGTTGAAGAGTATGTTCTGGTG 59.320 47.826 0.00 0.00 39.45 4.17
355 356 3.437049 GGTTGAAGAGTATGTTCTGGTGC 59.563 47.826 0.00 0.00 39.45 5.01
356 357 2.959516 TGAAGAGTATGTTCTGGTGCG 58.040 47.619 0.00 0.00 39.45 5.34
357 358 2.560981 TGAAGAGTATGTTCTGGTGCGA 59.439 45.455 0.00 0.00 39.45 5.10
358 359 3.195610 TGAAGAGTATGTTCTGGTGCGAT 59.804 43.478 0.00 0.00 39.45 4.58
359 360 3.170791 AGAGTATGTTCTGGTGCGATG 57.829 47.619 0.00 0.00 0.00 3.84
360 361 1.594862 GAGTATGTTCTGGTGCGATGC 59.405 52.381 0.00 0.00 0.00 3.91
361 362 1.066215 AGTATGTTCTGGTGCGATGCA 60.066 47.619 0.00 0.00 35.60 3.96
370 371 2.738139 TGCGATGCACAGTCACGG 60.738 61.111 0.00 0.00 31.71 4.94
371 372 2.432456 GCGATGCACAGTCACGGA 60.432 61.111 0.00 0.00 0.00 4.69
372 373 1.811266 GCGATGCACAGTCACGGAT 60.811 57.895 0.00 0.00 0.00 4.18
373 374 2.001357 CGATGCACAGTCACGGATG 58.999 57.895 0.00 0.00 0.00 3.51
374 375 1.423721 CGATGCACAGTCACGGATGG 61.424 60.000 0.00 0.00 0.00 3.51
375 376 0.108186 GATGCACAGTCACGGATGGA 60.108 55.000 0.00 0.00 0.00 3.41
376 377 0.391661 ATGCACAGTCACGGATGGAC 60.392 55.000 0.00 0.00 35.50 4.02
377 378 1.293498 GCACAGTCACGGATGGACT 59.707 57.895 0.00 0.00 46.11 3.85
378 379 0.530744 GCACAGTCACGGATGGACTA 59.469 55.000 0.00 0.00 43.47 2.59
379 380 1.137086 GCACAGTCACGGATGGACTAT 59.863 52.381 0.00 0.00 43.47 2.12
380 381 2.799917 GCACAGTCACGGATGGACTATC 60.800 54.545 0.00 0.00 43.47 2.08
381 382 2.427095 CACAGTCACGGATGGACTATCA 59.573 50.000 0.88 0.00 43.47 2.15
382 383 2.690497 ACAGTCACGGATGGACTATCAG 59.310 50.000 0.88 0.00 43.47 2.90
383 384 2.035193 CAGTCACGGATGGACTATCAGG 59.965 54.545 4.14 0.00 43.47 3.86
384 385 2.091830 AGTCACGGATGGACTATCAGGA 60.092 50.000 4.14 0.00 43.50 3.86
385 386 2.034812 GTCACGGATGGACTATCAGGAC 59.965 54.545 4.14 4.90 37.54 3.85
386 387 2.091830 TCACGGATGGACTATCAGGACT 60.092 50.000 4.14 0.00 37.54 3.85
387 388 3.137728 TCACGGATGGACTATCAGGACTA 59.862 47.826 4.14 0.00 37.54 2.59
388 389 3.253677 CACGGATGGACTATCAGGACTAC 59.746 52.174 4.14 0.00 37.54 2.73
389 390 2.484651 CGGATGGACTATCAGGACTACG 59.515 54.545 0.88 0.00 37.54 3.51
390 391 2.820787 GGATGGACTATCAGGACTACGG 59.179 54.545 0.88 0.00 37.54 4.02
391 392 3.498121 GGATGGACTATCAGGACTACGGA 60.498 52.174 0.88 0.00 37.54 4.69
392 393 3.210232 TGGACTATCAGGACTACGGAG 57.790 52.381 0.00 0.00 0.00 4.63
393 394 2.775960 TGGACTATCAGGACTACGGAGA 59.224 50.000 0.00 0.00 0.00 3.71
394 395 3.394940 TGGACTATCAGGACTACGGAGAT 59.605 47.826 0.00 0.00 0.00 2.75
395 396 3.754323 GGACTATCAGGACTACGGAGATG 59.246 52.174 0.00 0.00 0.00 2.90
396 397 4.391155 GACTATCAGGACTACGGAGATGT 58.609 47.826 0.00 0.00 0.00 3.06
397 398 4.138290 ACTATCAGGACTACGGAGATGTG 58.862 47.826 0.00 0.00 0.00 3.21
398 399 1.763968 TCAGGACTACGGAGATGTGG 58.236 55.000 0.00 0.00 0.00 4.17
399 400 1.005569 TCAGGACTACGGAGATGTGGT 59.994 52.381 0.00 0.00 36.15 4.16
400 401 1.405821 CAGGACTACGGAGATGTGGTC 59.594 57.143 0.00 2.24 46.17 4.02
401 402 3.920144 GACTACGGAGATGTGGTCG 57.080 57.895 0.00 0.00 39.93 4.79
402 403 1.093159 GACTACGGAGATGTGGTCGT 58.907 55.000 0.00 0.00 39.93 4.34
403 404 0.809385 ACTACGGAGATGTGGTCGTG 59.191 55.000 0.00 0.00 37.10 4.35
404 405 0.809385 CTACGGAGATGTGGTCGTGT 59.191 55.000 0.00 0.00 37.10 4.49
405 406 1.201647 CTACGGAGATGTGGTCGTGTT 59.798 52.381 0.00 0.00 37.10 3.32
406 407 0.391597 ACGGAGATGTGGTCGTGTTT 59.608 50.000 0.00 0.00 34.40 2.83
407 408 0.790207 CGGAGATGTGGTCGTGTTTG 59.210 55.000 0.00 0.00 0.00 2.93
408 409 1.604438 CGGAGATGTGGTCGTGTTTGA 60.604 52.381 0.00 0.00 0.00 2.69
409 410 1.798813 GGAGATGTGGTCGTGTTTGAC 59.201 52.381 0.00 0.00 38.17 3.18
410 411 2.479837 GAGATGTGGTCGTGTTTGACA 58.520 47.619 0.00 0.00 40.72 3.58
411 412 2.869801 GAGATGTGGTCGTGTTTGACAA 59.130 45.455 0.00 0.00 40.72 3.18
412 413 2.612212 AGATGTGGTCGTGTTTGACAAC 59.388 45.455 0.00 0.00 42.15 3.32
428 429 9.061435 TGTTTGACAACACATATAAGATGAACA 57.939 29.630 0.00 0.00 38.03 3.18
429 430 9.546909 GTTTGACAACACATATAAGATGAACAG 57.453 33.333 0.00 0.00 32.54 3.16
430 431 9.500785 TTTGACAACACATATAAGATGAACAGA 57.499 29.630 0.00 0.00 0.00 3.41
431 432 9.671279 TTGACAACACATATAAGATGAACAGAT 57.329 29.630 0.00 0.00 0.00 2.90
452 453 0.482446 TGGTATGCCATTCCATCCCC 59.518 55.000 0.00 0.00 40.46 4.81
453 454 0.779997 GGTATGCCATTCCATCCCCT 59.220 55.000 0.00 0.00 34.09 4.79
454 455 1.147817 GGTATGCCATTCCATCCCCTT 59.852 52.381 0.00 0.00 34.09 3.95
455 456 2.426268 GGTATGCCATTCCATCCCCTTT 60.426 50.000 0.00 0.00 34.09 3.11
456 457 1.797320 ATGCCATTCCATCCCCTTTG 58.203 50.000 0.00 0.00 0.00 2.77
457 458 0.413037 TGCCATTCCATCCCCTTTGT 59.587 50.000 0.00 0.00 0.00 2.83
458 459 1.114627 GCCATTCCATCCCCTTTGTC 58.885 55.000 0.00 0.00 0.00 3.18
459 460 1.392589 CCATTCCATCCCCTTTGTCG 58.607 55.000 0.00 0.00 0.00 4.35
460 461 0.740737 CATTCCATCCCCTTTGTCGC 59.259 55.000 0.00 0.00 0.00 5.19
461 462 0.625849 ATTCCATCCCCTTTGTCGCT 59.374 50.000 0.00 0.00 0.00 4.93
462 463 0.322456 TTCCATCCCCTTTGTCGCTG 60.322 55.000 0.00 0.00 0.00 5.18
463 464 1.002134 CCATCCCCTTTGTCGCTGT 60.002 57.895 0.00 0.00 0.00 4.40
464 465 0.609131 CCATCCCCTTTGTCGCTGTT 60.609 55.000 0.00 0.00 0.00 3.16
465 466 1.339631 CCATCCCCTTTGTCGCTGTTA 60.340 52.381 0.00 0.00 0.00 2.41
466 467 2.432444 CATCCCCTTTGTCGCTGTTAA 58.568 47.619 0.00 0.00 0.00 2.01
467 468 2.871096 TCCCCTTTGTCGCTGTTAAT 57.129 45.000 0.00 0.00 0.00 1.40
468 469 3.985019 TCCCCTTTGTCGCTGTTAATA 57.015 42.857 0.00 0.00 0.00 0.98
469 470 4.289238 TCCCCTTTGTCGCTGTTAATAA 57.711 40.909 0.00 0.00 0.00 1.40
470 471 4.004982 TCCCCTTTGTCGCTGTTAATAAC 58.995 43.478 0.00 0.00 0.00 1.89
471 472 3.128068 CCCCTTTGTCGCTGTTAATAACC 59.872 47.826 0.18 0.00 0.00 2.85
472 473 3.754323 CCCTTTGTCGCTGTTAATAACCA 59.246 43.478 0.18 0.00 0.00 3.67
473 474 4.379082 CCCTTTGTCGCTGTTAATAACCAC 60.379 45.833 0.18 0.00 0.00 4.16
474 475 4.379082 CCTTTGTCGCTGTTAATAACCACC 60.379 45.833 0.18 0.00 0.00 4.61
475 476 2.339418 TGTCGCTGTTAATAACCACCG 58.661 47.619 0.18 1.47 0.00 4.94
476 477 2.288948 TGTCGCTGTTAATAACCACCGT 60.289 45.455 0.18 0.00 0.00 4.83
477 478 2.738314 GTCGCTGTTAATAACCACCGTT 59.262 45.455 0.18 0.00 35.90 4.44
478 479 2.737783 TCGCTGTTAATAACCACCGTTG 59.262 45.455 0.18 0.00 33.17 4.10
479 480 2.726681 CGCTGTTAATAACCACCGTTGC 60.727 50.000 0.18 0.00 33.17 4.17
480 481 2.226912 GCTGTTAATAACCACCGTTGCA 59.773 45.455 0.18 0.00 33.17 4.08
481 482 3.817238 CTGTTAATAACCACCGTTGCAC 58.183 45.455 0.18 0.00 33.17 4.57
482 483 2.553172 TGTTAATAACCACCGTTGCACC 59.447 45.455 0.18 0.00 33.17 5.01
483 484 2.553172 GTTAATAACCACCGTTGCACCA 59.447 45.455 0.00 0.00 33.17 4.17
484 485 0.955905 AATAACCACCGTTGCACCAC 59.044 50.000 0.00 0.00 33.17 4.16
485 486 0.109723 ATAACCACCGTTGCACCACT 59.890 50.000 0.00 0.00 33.17 4.00
486 487 0.816018 TAACCACCGTTGCACCACTG 60.816 55.000 0.00 0.00 33.17 3.66
487 488 2.515991 CCACCGTTGCACCACTGT 60.516 61.111 0.00 0.00 0.00 3.55
488 489 2.118404 CCACCGTTGCACCACTGTT 61.118 57.895 0.00 0.00 0.00 3.16
489 490 1.662438 CCACCGTTGCACCACTGTTT 61.662 55.000 0.00 0.00 0.00 2.83
490 491 0.172352 CACCGTTGCACCACTGTTTT 59.828 50.000 0.00 0.00 0.00 2.43
491 492 0.892063 ACCGTTGCACCACTGTTTTT 59.108 45.000 0.00 0.00 0.00 1.94
492 493 1.276415 CCGTTGCACCACTGTTTTTG 58.724 50.000 0.00 0.00 0.00 2.44
493 494 1.276415 CGTTGCACCACTGTTTTTGG 58.724 50.000 0.00 0.00 40.32 3.28
495 496 2.694213 GTTGCACCACTGTTTTTGGTT 58.306 42.857 0.00 0.00 45.62 3.67
496 497 2.376808 TGCACCACTGTTTTTGGTTG 57.623 45.000 0.00 0.00 45.62 3.77
497 498 1.006086 GCACCACTGTTTTTGGTTGC 58.994 50.000 0.00 0.00 45.62 4.17
498 499 1.276415 CACCACTGTTTTTGGTTGCG 58.724 50.000 0.00 0.00 45.62 4.85
499 500 0.459411 ACCACTGTTTTTGGTTGCGC 60.459 50.000 0.00 0.00 45.62 6.09
500 501 1.151172 CCACTGTTTTTGGTTGCGCC 61.151 55.000 4.18 0.00 37.90 6.53
510 511 2.937469 TGGTTGCGCCATTATTTCTG 57.063 45.000 4.18 0.00 43.61 3.02
511 512 2.441410 TGGTTGCGCCATTATTTCTGA 58.559 42.857 4.18 0.00 43.61 3.27
512 513 2.423185 TGGTTGCGCCATTATTTCTGAG 59.577 45.455 4.18 0.00 43.61 3.35
513 514 2.682856 GGTTGCGCCATTATTTCTGAGA 59.317 45.455 4.18 0.00 37.17 3.27
514 515 3.242870 GGTTGCGCCATTATTTCTGAGAG 60.243 47.826 4.18 0.00 37.17 3.20
515 516 3.541996 TGCGCCATTATTTCTGAGAGA 57.458 42.857 4.18 0.00 0.00 3.10
516 517 3.198068 TGCGCCATTATTTCTGAGAGAC 58.802 45.455 4.18 0.00 0.00 3.36
517 518 2.545946 GCGCCATTATTTCTGAGAGACC 59.454 50.000 0.00 0.00 0.00 3.85
518 519 3.797039 CGCCATTATTTCTGAGAGACCA 58.203 45.455 0.00 0.00 0.00 4.02
519 520 4.191544 CGCCATTATTTCTGAGAGACCAA 58.808 43.478 0.00 0.00 0.00 3.67
520 521 4.635765 CGCCATTATTTCTGAGAGACCAAA 59.364 41.667 0.00 0.00 0.00 3.28
521 522 5.220739 CGCCATTATTTCTGAGAGACCAAAG 60.221 44.000 0.00 0.00 0.00 2.77
522 523 5.882557 GCCATTATTTCTGAGAGACCAAAGA 59.117 40.000 0.00 0.00 0.00 2.52
523 524 6.038050 GCCATTATTTCTGAGAGACCAAAGAG 59.962 42.308 0.00 0.00 0.00 2.85
524 525 7.334090 CCATTATTTCTGAGAGACCAAAGAGA 58.666 38.462 0.00 0.00 0.00 3.10
525 526 7.279758 CCATTATTTCTGAGAGACCAAAGAGAC 59.720 40.741 0.00 0.00 0.00 3.36
526 527 3.924918 TTCTGAGAGACCAAAGAGACG 57.075 47.619 0.00 0.00 0.00 4.18
527 528 2.865079 TCTGAGAGACCAAAGAGACGT 58.135 47.619 0.00 0.00 0.00 4.34
528 529 4.017177 TCTGAGAGACCAAAGAGACGTA 57.983 45.455 0.00 0.00 0.00 3.57
529 530 3.752222 TCTGAGAGACCAAAGAGACGTAC 59.248 47.826 0.00 0.00 0.00 3.67
530 531 3.483421 TGAGAGACCAAAGAGACGTACA 58.517 45.455 0.00 0.00 0.00 2.90
531 532 4.079970 TGAGAGACCAAAGAGACGTACAT 58.920 43.478 0.00 0.00 0.00 2.29
532 533 4.082733 TGAGAGACCAAAGAGACGTACATG 60.083 45.833 0.00 0.00 0.00 3.21
533 534 3.827302 AGAGACCAAAGAGACGTACATGT 59.173 43.478 2.69 2.69 0.00 3.21
534 535 3.914312 AGACCAAAGAGACGTACATGTG 58.086 45.455 9.11 0.00 0.00 3.21
535 536 2.993899 GACCAAAGAGACGTACATGTGG 59.006 50.000 9.11 2.65 0.00 4.17
536 537 1.732259 CCAAAGAGACGTACATGTGGC 59.268 52.381 9.11 0.00 0.00 5.01
537 538 2.612972 CCAAAGAGACGTACATGTGGCT 60.613 50.000 9.11 0.00 0.00 4.75
538 539 3.067106 CAAAGAGACGTACATGTGGCTT 58.933 45.455 9.11 0.16 0.00 4.35
539 540 2.656560 AGAGACGTACATGTGGCTTC 57.343 50.000 9.11 4.73 0.00 3.86
540 541 2.171840 AGAGACGTACATGTGGCTTCT 58.828 47.619 9.11 9.53 0.00 2.85
541 542 2.164624 AGAGACGTACATGTGGCTTCTC 59.835 50.000 20.76 20.76 0.00 2.87
542 543 1.204941 AGACGTACATGTGGCTTCTCC 59.795 52.381 9.11 0.00 0.00 3.71
543 544 0.973632 ACGTACATGTGGCTTCTCCA 59.026 50.000 9.11 0.00 44.18 3.86
548 549 1.632409 ACATGTGGCTTCTCCAGACAT 59.368 47.619 0.00 0.00 44.99 3.06
549 550 2.286872 CATGTGGCTTCTCCAGACATC 58.713 52.381 0.00 0.00 44.99 3.06
550 551 1.649321 TGTGGCTTCTCCAGACATCT 58.351 50.000 0.00 0.00 44.99 2.90
551 552 2.820178 TGTGGCTTCTCCAGACATCTA 58.180 47.619 0.00 0.00 44.99 1.98
552 553 3.378512 TGTGGCTTCTCCAGACATCTAT 58.621 45.455 0.00 0.00 44.99 1.98
553 554 3.133542 TGTGGCTTCTCCAGACATCTATG 59.866 47.826 0.00 0.00 44.99 2.23
554 555 3.386078 GTGGCTTCTCCAGACATCTATGA 59.614 47.826 0.00 0.00 44.99 2.15
555 556 3.640498 TGGCTTCTCCAGACATCTATGAG 59.360 47.826 0.00 2.59 40.72 2.90
556 557 3.006752 GGCTTCTCCAGACATCTATGAGG 59.993 52.174 0.00 0.00 34.01 3.86
557 558 3.554752 GCTTCTCCAGACATCTATGAGGC 60.555 52.174 0.00 3.40 0.00 4.70
558 559 3.319031 TCTCCAGACATCTATGAGGCA 57.681 47.619 0.00 0.00 0.00 4.75
559 560 3.646534 TCTCCAGACATCTATGAGGCAA 58.353 45.455 0.00 0.00 0.00 4.52
560 561 4.033009 TCTCCAGACATCTATGAGGCAAA 58.967 43.478 0.00 0.00 0.00 3.68
561 562 4.125703 CTCCAGACATCTATGAGGCAAAC 58.874 47.826 0.00 0.00 0.00 2.93
562 563 3.776969 TCCAGACATCTATGAGGCAAACT 59.223 43.478 0.00 0.00 0.00 2.66
563 564 3.875727 CCAGACATCTATGAGGCAAACTG 59.124 47.826 0.00 0.00 0.00 3.16
564 565 4.511527 CAGACATCTATGAGGCAAACTGT 58.488 43.478 0.00 0.00 0.00 3.55
565 566 4.569966 CAGACATCTATGAGGCAAACTGTC 59.430 45.833 0.00 0.00 33.64 3.51
566 567 4.223700 AGACATCTATGAGGCAAACTGTCA 59.776 41.667 0.00 0.00 35.40 3.58
567 568 4.511527 ACATCTATGAGGCAAACTGTCAG 58.488 43.478 0.00 0.00 0.00 3.51
568 569 2.977914 TCTATGAGGCAAACTGTCAGC 58.022 47.619 0.00 0.00 0.00 4.26
569 570 2.302733 TCTATGAGGCAAACTGTCAGCA 59.697 45.455 0.00 0.00 0.00 4.41
661 662 6.041637 TGAAAGCATCTAATATGTAGGGACGT 59.958 38.462 0.00 0.00 0.00 4.34
1026 2353 2.759795 GCAAGGACTGCCCCTCTT 59.240 61.111 0.00 0.00 46.13 2.85
1030 2357 0.118144 AAGGACTGCCCCTCTTCTCT 59.882 55.000 0.00 0.00 34.95 3.10
1212 2544 4.819769 ACTTGCTGTCAACAAACAACAAT 58.180 34.783 0.00 0.00 35.39 2.71
1506 2861 4.349636 TGGAACAACCATATATCGGACCAT 59.650 41.667 7.84 0.00 44.64 3.55
1569 2924 6.091437 CGAGAAAGTACCTCGTTTGTATCTT 58.909 40.000 10.71 0.00 45.89 2.40
1570 2925 6.033619 CGAGAAAGTACCTCGTTTGTATCTTG 59.966 42.308 10.71 0.00 45.89 3.02
1577 2932 6.780706 ACCTCGTTTGTATCTTGTACTTTG 57.219 37.500 0.00 0.00 0.00 2.77
1809 3169 8.370182 AGTTTTCACCATATTTTTGAAGCAGAT 58.630 29.630 0.00 0.00 31.11 2.90
2111 3481 2.498078 AGTAAGTAGCTGCAGTCTTCCC 59.502 50.000 16.64 11.20 0.00 3.97
2126 3496 6.555315 CAGTCTTCCCGGATTTTTGATAAAG 58.445 40.000 0.73 0.00 0.00 1.85
2203 3574 3.149196 CAATGAGGCAAGTGGTAGTGTT 58.851 45.455 0.00 0.00 0.00 3.32
2213 3584 6.239204 GGCAAGTGGTAGTGTTTCCTAAAAAT 60.239 38.462 0.00 0.00 0.00 1.82
2252 3630 2.497107 AAACACATGCAGCAACTGAC 57.503 45.000 0.00 0.00 32.44 3.51
2401 3787 2.101783 CCAGCCAAATGTTGCCAGATA 58.898 47.619 0.00 0.00 0.00 1.98
2446 3833 1.079503 GAGGTGAGTGAATGTTCGGC 58.920 55.000 0.00 0.00 0.00 5.54
2596 3993 7.757624 TGTCAAAGTAAGCTTTTAACCAAACTG 59.242 33.333 3.20 0.00 42.54 3.16
2870 8115 1.799933 TTGGCTGGAAAACCCAACAT 58.200 45.000 0.00 0.00 46.07 2.71
2872 8117 2.524306 TGGCTGGAAAACCCAACATAG 58.476 47.619 0.00 0.00 46.07 2.23
2906 8151 5.991606 GCTATAGTGGCTATGTCATCAACAA 59.008 40.000 0.84 0.00 42.37 2.83
2992 8238 5.772521 ACATTGCAGAAAATGGTGTTAGAC 58.227 37.500 1.44 0.00 41.06 2.59
3011 8257 7.498900 TGTTAGACATTATGGCAGATTAAGTGG 59.501 37.037 0.00 0.00 0.00 4.00
3082 8328 6.290605 TGTGATTGGTATGATGTCTACCATG 58.709 40.000 3.22 0.00 46.03 3.66
3150 8396 3.081804 GTCTGGGAAAATACACACAGGG 58.918 50.000 0.00 0.00 0.00 4.45
3162 8408 1.833630 CACACAGGGGATGAGCTAGAA 59.166 52.381 0.00 0.00 0.00 2.10
3199 8521 1.418097 TTCCTCCCAAGTGCAGCAGA 61.418 55.000 0.00 0.00 0.00 4.26
3206 8528 2.298163 CCCAAGTGCAGCAGATTTTCTT 59.702 45.455 0.00 0.00 0.00 2.52
3260 8582 1.203187 AGTAGTGGAAGTCAGGCCTCA 60.203 52.381 0.00 0.00 0.00 3.86
3281 8603 3.940209 TGATCTTTTTGACATGGGTGC 57.060 42.857 0.00 0.00 0.00 5.01
3293 8615 3.698040 GACATGGGTGCTGAAGAATCATT 59.302 43.478 0.00 0.00 34.37 2.57
3698 9080 2.579410 AATTGGGAGGTGCGTAGTTT 57.421 45.000 0.00 0.00 0.00 2.66
3716 9098 9.382244 GCGTAGTTTAGCTAAATGGAATTAATG 57.618 33.333 21.28 8.04 33.67 1.90
3743 9125 9.616156 TGTGTTTGAATGTAAGAAACTAGGTTA 57.384 29.630 0.00 0.00 32.01 2.85
3769 9151 3.562973 CAGACTGATGTGCTTTTGTCTGT 59.437 43.478 11.39 0.00 43.45 3.41
3935 9317 9.174166 GGATTGTAGATTTCTTTTACCTTGCTA 57.826 33.333 0.00 0.00 0.00 3.49
4041 9681 6.561350 CGAAAATTTGGCCTAAAACTTGAACG 60.561 38.462 3.32 0.00 0.00 3.95
4129 9769 7.516452 TCTGGGAAATTTTCAATCATTTTGGT 58.484 30.769 11.09 0.00 0.00 3.67
4203 9850 7.881775 ATTGAACCCAAATAAGTATCCAGAC 57.118 36.000 0.00 0.00 35.67 3.51
4236 9883 7.708752 TGAAATTTTAACACAAGGACAACCATC 59.291 33.333 0.00 0.00 38.94 3.51
4303 9950 0.320073 CCGACGAGGCAACAACCTAA 60.320 55.000 0.00 0.00 41.32 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 3.059597 GCGCGACTAGAAATGTATGCATT 60.060 43.478 12.10 2.84 46.38 3.56
42 43 2.476619 GCGCGACTAGAAATGTATGCAT 59.523 45.455 12.10 3.79 36.80 3.96
43 44 1.858458 GCGCGACTAGAAATGTATGCA 59.142 47.619 12.10 0.00 0.00 3.96
44 45 1.136884 CGCGCGACTAGAAATGTATGC 60.137 52.381 28.94 0.00 0.00 3.14
45 46 1.136884 GCGCGCGACTAGAAATGTATG 60.137 52.381 37.18 0.00 0.00 2.39
46 47 1.129326 GCGCGCGACTAGAAATGTAT 58.871 50.000 37.18 0.00 0.00 2.29
47 48 2.573802 GCGCGCGACTAGAAATGTA 58.426 52.632 37.18 0.00 0.00 2.29
48 49 3.384927 GCGCGCGACTAGAAATGT 58.615 55.556 37.18 0.00 0.00 2.71
126 127 0.317519 AAAAACCTGTTAGCGCACGC 60.318 50.000 11.47 6.99 42.33 5.34
188 189 4.005650 CACACATTGTAAGCATCTCACCT 58.994 43.478 0.00 0.00 0.00 4.00
189 190 3.426695 GCACACATTGTAAGCATCTCACC 60.427 47.826 7.53 0.00 0.00 4.02
190 191 3.438087 AGCACACATTGTAAGCATCTCAC 59.562 43.478 13.15 0.00 0.00 3.51
191 192 3.437741 CAGCACACATTGTAAGCATCTCA 59.562 43.478 13.15 0.00 0.00 3.27
192 193 3.730061 GCAGCACACATTGTAAGCATCTC 60.730 47.826 13.15 0.00 0.00 2.75
193 194 2.163010 GCAGCACACATTGTAAGCATCT 59.837 45.455 13.15 0.00 0.00 2.90
196 197 1.267533 CTGCAGCACACATTGTAAGCA 59.732 47.619 0.00 7.63 32.45 3.91
197 198 1.536766 TCTGCAGCACACATTGTAAGC 59.463 47.619 9.47 4.89 0.00 3.09
198 199 3.069289 TCTCTGCAGCACACATTGTAAG 58.931 45.455 9.47 0.00 0.00 2.34
199 200 3.069289 CTCTCTGCAGCACACATTGTAA 58.931 45.455 9.47 0.00 0.00 2.41
200 201 2.299867 TCTCTCTGCAGCACACATTGTA 59.700 45.455 9.47 0.00 0.00 2.41
201 202 1.071228 TCTCTCTGCAGCACACATTGT 59.929 47.619 9.47 0.00 0.00 2.71
202 203 1.804601 TCTCTCTGCAGCACACATTG 58.195 50.000 9.47 0.00 0.00 2.82
203 204 2.556144 TTCTCTCTGCAGCACACATT 57.444 45.000 9.47 0.00 0.00 2.71
204 205 2.556144 TTTCTCTCTGCAGCACACAT 57.444 45.000 9.47 0.00 0.00 3.21
205 206 2.330440 TTTTCTCTCTGCAGCACACA 57.670 45.000 9.47 0.00 0.00 3.72
206 207 2.810274 TCATTTTCTCTCTGCAGCACAC 59.190 45.455 9.47 0.00 0.00 3.82
207 208 3.130280 TCATTTTCTCTCTGCAGCACA 57.870 42.857 9.47 0.00 0.00 4.57
208 209 3.119919 CCTTCATTTTCTCTCTGCAGCAC 60.120 47.826 9.47 0.00 0.00 4.40
209 210 3.079578 CCTTCATTTTCTCTCTGCAGCA 58.920 45.455 9.47 0.00 0.00 4.41
210 211 3.080319 ACCTTCATTTTCTCTCTGCAGC 58.920 45.455 9.47 0.00 0.00 5.25
211 212 4.321718 TGACCTTCATTTTCTCTCTGCAG 58.678 43.478 7.63 7.63 0.00 4.41
212 213 4.356405 TGACCTTCATTTTCTCTCTGCA 57.644 40.909 0.00 0.00 0.00 4.41
213 214 5.638783 CAATGACCTTCATTTTCTCTCTGC 58.361 41.667 0.00 0.00 44.03 4.26
214 215 5.182570 TGCAATGACCTTCATTTTCTCTCTG 59.817 40.000 0.00 0.00 44.03 3.35
215 216 5.319453 TGCAATGACCTTCATTTTCTCTCT 58.681 37.500 0.00 0.00 44.03 3.10
216 217 5.633830 TGCAATGACCTTCATTTTCTCTC 57.366 39.130 0.00 0.00 44.03 3.20
217 218 6.409524 TTTGCAATGACCTTCATTTTCTCT 57.590 33.333 0.00 0.00 44.03 3.10
218 219 5.636543 CCTTTGCAATGACCTTCATTTTCTC 59.363 40.000 13.58 0.00 44.03 2.87
219 220 5.511888 CCCTTTGCAATGACCTTCATTTTCT 60.512 40.000 13.58 0.00 44.03 2.52
220 221 4.692155 CCCTTTGCAATGACCTTCATTTTC 59.308 41.667 13.58 0.00 44.03 2.29
221 222 4.102996 ACCCTTTGCAATGACCTTCATTTT 59.897 37.500 13.58 0.00 44.03 1.82
222 223 3.647590 ACCCTTTGCAATGACCTTCATTT 59.352 39.130 13.58 0.00 44.03 2.32
224 225 2.564062 CACCCTTTGCAATGACCTTCAT 59.436 45.455 13.58 0.00 39.09 2.57
225 226 1.962807 CACCCTTTGCAATGACCTTCA 59.037 47.619 13.58 0.00 0.00 3.02
226 227 2.238521 TCACCCTTTGCAATGACCTTC 58.761 47.619 13.58 0.00 0.00 3.46
227 228 2.380064 TCACCCTTTGCAATGACCTT 57.620 45.000 13.58 0.00 0.00 3.50
228 229 2.173519 CATCACCCTTTGCAATGACCT 58.826 47.619 13.58 0.00 0.00 3.85
229 230 1.404583 GCATCACCCTTTGCAATGACC 60.405 52.381 13.58 0.20 38.72 4.02
230 231 1.547372 AGCATCACCCTTTGCAATGAC 59.453 47.619 13.58 0.00 41.35 3.06
231 232 1.546923 CAGCATCACCCTTTGCAATGA 59.453 47.619 13.58 8.33 41.35 2.57
232 233 1.546923 TCAGCATCACCCTTTGCAATG 59.453 47.619 0.00 1.92 41.35 2.82
233 234 1.822990 CTCAGCATCACCCTTTGCAAT 59.177 47.619 0.00 0.00 41.35 3.56
234 235 1.202915 TCTCAGCATCACCCTTTGCAA 60.203 47.619 0.00 0.00 41.35 4.08
235 236 0.401356 TCTCAGCATCACCCTTTGCA 59.599 50.000 0.00 0.00 41.35 4.08
236 237 0.807496 GTCTCAGCATCACCCTTTGC 59.193 55.000 0.00 0.00 39.17 3.68
237 238 1.081892 CGTCTCAGCATCACCCTTTG 58.918 55.000 0.00 0.00 0.00 2.77
238 239 0.036010 CCGTCTCAGCATCACCCTTT 60.036 55.000 0.00 0.00 0.00 3.11
239 240 1.194781 ACCGTCTCAGCATCACCCTT 61.195 55.000 0.00 0.00 0.00 3.95
240 241 0.324368 TACCGTCTCAGCATCACCCT 60.324 55.000 0.00 0.00 0.00 4.34
241 242 0.103208 CTACCGTCTCAGCATCACCC 59.897 60.000 0.00 0.00 0.00 4.61
242 243 0.818296 ACTACCGTCTCAGCATCACC 59.182 55.000 0.00 0.00 0.00 4.02
243 244 1.469940 CCACTACCGTCTCAGCATCAC 60.470 57.143 0.00 0.00 0.00 3.06
244 245 0.817654 CCACTACCGTCTCAGCATCA 59.182 55.000 0.00 0.00 0.00 3.07
245 246 1.103803 TCCACTACCGTCTCAGCATC 58.896 55.000 0.00 0.00 0.00 3.91
246 247 0.818296 GTCCACTACCGTCTCAGCAT 59.182 55.000 0.00 0.00 0.00 3.79
247 248 0.538746 TGTCCACTACCGTCTCAGCA 60.539 55.000 0.00 0.00 0.00 4.41
248 249 0.818296 ATGTCCACTACCGTCTCAGC 59.182 55.000 0.00 0.00 0.00 4.26
249 250 4.338400 TCATAATGTCCACTACCGTCTCAG 59.662 45.833 0.00 0.00 0.00 3.35
250 251 4.274978 TCATAATGTCCACTACCGTCTCA 58.725 43.478 0.00 0.00 0.00 3.27
251 252 4.261656 CCTCATAATGTCCACTACCGTCTC 60.262 50.000 0.00 0.00 0.00 3.36
252 253 3.637229 CCTCATAATGTCCACTACCGTCT 59.363 47.826 0.00 0.00 0.00 4.18
253 254 3.635373 TCCTCATAATGTCCACTACCGTC 59.365 47.826 0.00 0.00 0.00 4.79
254 255 3.637229 CTCCTCATAATGTCCACTACCGT 59.363 47.826 0.00 0.00 0.00 4.83
255 256 3.553096 GCTCCTCATAATGTCCACTACCG 60.553 52.174 0.00 0.00 0.00 4.02
256 257 3.388024 TGCTCCTCATAATGTCCACTACC 59.612 47.826 0.00 0.00 0.00 3.18
257 258 4.342378 TCTGCTCCTCATAATGTCCACTAC 59.658 45.833 0.00 0.00 0.00 2.73
258 259 4.546674 TCTGCTCCTCATAATGTCCACTA 58.453 43.478 0.00 0.00 0.00 2.74
259 260 3.378512 TCTGCTCCTCATAATGTCCACT 58.621 45.455 0.00 0.00 0.00 4.00
260 261 3.827008 TCTGCTCCTCATAATGTCCAC 57.173 47.619 0.00 0.00 0.00 4.02
261 262 4.225942 ACTTTCTGCTCCTCATAATGTCCA 59.774 41.667 0.00 0.00 0.00 4.02
262 263 4.775236 ACTTTCTGCTCCTCATAATGTCC 58.225 43.478 0.00 0.00 0.00 4.02
263 264 4.505922 CGACTTTCTGCTCCTCATAATGTC 59.494 45.833 0.00 0.00 34.99 3.06
264 265 4.160439 TCGACTTTCTGCTCCTCATAATGT 59.840 41.667 0.00 0.00 0.00 2.71
265 266 4.686972 TCGACTTTCTGCTCCTCATAATG 58.313 43.478 0.00 0.00 0.00 1.90
266 267 5.344743 TTCGACTTTCTGCTCCTCATAAT 57.655 39.130 0.00 0.00 0.00 1.28
267 268 4.382040 CCTTCGACTTTCTGCTCCTCATAA 60.382 45.833 0.00 0.00 0.00 1.90
268 269 3.131223 CCTTCGACTTTCTGCTCCTCATA 59.869 47.826 0.00 0.00 0.00 2.15
269 270 2.093764 CCTTCGACTTTCTGCTCCTCAT 60.094 50.000 0.00 0.00 0.00 2.90
270 271 1.273606 CCTTCGACTTTCTGCTCCTCA 59.726 52.381 0.00 0.00 0.00 3.86
271 272 1.546476 TCCTTCGACTTTCTGCTCCTC 59.454 52.381 0.00 0.00 0.00 3.71
272 273 1.273886 GTCCTTCGACTTTCTGCTCCT 59.726 52.381 0.00 0.00 35.99 3.69
273 274 1.673329 GGTCCTTCGACTTTCTGCTCC 60.673 57.143 0.00 0.00 39.15 4.70
274 275 1.673329 GGGTCCTTCGACTTTCTGCTC 60.673 57.143 0.00 0.00 39.15 4.26
275 276 0.321996 GGGTCCTTCGACTTTCTGCT 59.678 55.000 0.00 0.00 39.15 4.24
276 277 0.321996 AGGGTCCTTCGACTTTCTGC 59.678 55.000 0.00 0.00 39.15 4.26
277 278 1.618837 TCAGGGTCCTTCGACTTTCTG 59.381 52.381 0.00 0.00 39.15 3.02
278 279 1.619332 GTCAGGGTCCTTCGACTTTCT 59.381 52.381 0.00 0.00 39.15 2.52
279 280 1.619332 AGTCAGGGTCCTTCGACTTTC 59.381 52.381 4.69 0.00 39.15 2.62
280 281 1.718280 AGTCAGGGTCCTTCGACTTT 58.282 50.000 4.69 0.00 39.15 2.66
281 282 1.718280 AAGTCAGGGTCCTTCGACTT 58.282 50.000 13.69 13.69 42.40 3.01
282 283 1.203075 AGAAGTCAGGGTCCTTCGACT 60.203 52.381 4.69 4.69 41.51 4.18
283 284 1.258676 AGAAGTCAGGGTCCTTCGAC 58.741 55.000 0.00 0.69 41.51 4.20
284 285 1.893801 GAAGAAGTCAGGGTCCTTCGA 59.106 52.381 0.00 0.00 41.51 3.71
285 286 1.896465 AGAAGAAGTCAGGGTCCTTCG 59.104 52.381 0.00 0.00 41.51 3.79
286 287 4.068599 CAAAGAAGAAGTCAGGGTCCTTC 58.931 47.826 0.00 0.00 37.85 3.46
287 288 3.716872 TCAAAGAAGAAGTCAGGGTCCTT 59.283 43.478 0.00 0.00 0.00 3.36
288 289 3.318313 TCAAAGAAGAAGTCAGGGTCCT 58.682 45.455 0.00 0.00 0.00 3.85
289 290 3.071747 ACTCAAAGAAGAAGTCAGGGTCC 59.928 47.826 0.00 0.00 0.00 4.46
290 291 4.344359 ACTCAAAGAAGAAGTCAGGGTC 57.656 45.455 0.00 0.00 0.00 4.46
291 292 4.262079 CGTACTCAAAGAAGAAGTCAGGGT 60.262 45.833 0.00 0.00 0.00 4.34
292 293 4.238514 CGTACTCAAAGAAGAAGTCAGGG 58.761 47.826 0.00 0.00 0.00 4.45
293 294 4.681942 CACGTACTCAAAGAAGAAGTCAGG 59.318 45.833 0.00 0.00 0.00 3.86
294 295 4.149046 GCACGTACTCAAAGAAGAAGTCAG 59.851 45.833 0.00 0.00 0.00 3.51
295 296 4.049186 GCACGTACTCAAAGAAGAAGTCA 58.951 43.478 0.00 0.00 0.00 3.41
296 297 4.299978 AGCACGTACTCAAAGAAGAAGTC 58.700 43.478 0.00 0.00 0.00 3.01
297 298 4.323553 AGCACGTACTCAAAGAAGAAGT 57.676 40.909 0.00 0.00 0.00 3.01
298 299 4.745125 TGAAGCACGTACTCAAAGAAGAAG 59.255 41.667 0.00 0.00 0.00 2.85
299 300 4.689071 TGAAGCACGTACTCAAAGAAGAA 58.311 39.130 0.00 0.00 0.00 2.52
300 301 4.316205 TGAAGCACGTACTCAAAGAAGA 57.684 40.909 0.00 0.00 0.00 2.87
301 302 6.183360 CCTTATGAAGCACGTACTCAAAGAAG 60.183 42.308 0.00 0.00 0.00 2.85
302 303 5.637810 CCTTATGAAGCACGTACTCAAAGAA 59.362 40.000 0.00 0.00 0.00 2.52
303 304 5.047590 TCCTTATGAAGCACGTACTCAAAGA 60.048 40.000 0.00 0.00 0.00 2.52
304 305 5.168569 TCCTTATGAAGCACGTACTCAAAG 58.831 41.667 0.00 0.00 0.00 2.77
305 306 5.142061 TCCTTATGAAGCACGTACTCAAA 57.858 39.130 0.00 0.00 0.00 2.69
306 307 4.794278 TCCTTATGAAGCACGTACTCAA 57.206 40.909 0.00 0.00 0.00 3.02
307 308 4.744570 CTTCCTTATGAAGCACGTACTCA 58.255 43.478 0.00 0.00 43.79 3.41
318 319 4.285003 TCTTCAACCGTCCTTCCTTATGAA 59.715 41.667 0.00 0.00 0.00 2.57
319 320 3.835978 TCTTCAACCGTCCTTCCTTATGA 59.164 43.478 0.00 0.00 0.00 2.15
320 321 4.184629 CTCTTCAACCGTCCTTCCTTATG 58.815 47.826 0.00 0.00 0.00 1.90
321 322 3.838903 ACTCTTCAACCGTCCTTCCTTAT 59.161 43.478 0.00 0.00 0.00 1.73
322 323 3.236896 ACTCTTCAACCGTCCTTCCTTA 58.763 45.455 0.00 0.00 0.00 2.69
323 324 2.047830 ACTCTTCAACCGTCCTTCCTT 58.952 47.619 0.00 0.00 0.00 3.36
324 325 1.718280 ACTCTTCAACCGTCCTTCCT 58.282 50.000 0.00 0.00 0.00 3.36
325 326 3.056035 ACATACTCTTCAACCGTCCTTCC 60.056 47.826 0.00 0.00 0.00 3.46
326 327 4.189639 ACATACTCTTCAACCGTCCTTC 57.810 45.455 0.00 0.00 0.00 3.46
327 328 4.283722 AGAACATACTCTTCAACCGTCCTT 59.716 41.667 0.00 0.00 0.00 3.36
328 329 3.833070 AGAACATACTCTTCAACCGTCCT 59.167 43.478 0.00 0.00 0.00 3.85
329 330 3.927142 CAGAACATACTCTTCAACCGTCC 59.073 47.826 0.00 0.00 0.00 4.79
330 331 3.927142 CCAGAACATACTCTTCAACCGTC 59.073 47.826 0.00 0.00 0.00 4.79
331 332 3.323979 ACCAGAACATACTCTTCAACCGT 59.676 43.478 0.00 0.00 0.00 4.83
332 333 3.679980 CACCAGAACATACTCTTCAACCG 59.320 47.826 0.00 0.00 0.00 4.44
333 334 3.437049 GCACCAGAACATACTCTTCAACC 59.563 47.826 0.00 0.00 0.00 3.77
334 335 3.123621 CGCACCAGAACATACTCTTCAAC 59.876 47.826 0.00 0.00 0.00 3.18
335 336 3.006430 TCGCACCAGAACATACTCTTCAA 59.994 43.478 0.00 0.00 0.00 2.69
336 337 2.560981 TCGCACCAGAACATACTCTTCA 59.439 45.455 0.00 0.00 0.00 3.02
337 338 3.232213 TCGCACCAGAACATACTCTTC 57.768 47.619 0.00 0.00 0.00 2.87
338 339 3.525537 CATCGCACCAGAACATACTCTT 58.474 45.455 0.00 0.00 0.00 2.85
339 340 2.739932 GCATCGCACCAGAACATACTCT 60.740 50.000 0.00 0.00 0.00 3.24
340 341 1.594862 GCATCGCACCAGAACATACTC 59.405 52.381 0.00 0.00 0.00 2.59
341 342 1.066215 TGCATCGCACCAGAACATACT 60.066 47.619 0.00 0.00 31.71 2.12
342 343 1.368641 TGCATCGCACCAGAACATAC 58.631 50.000 0.00 0.00 31.71 2.39
343 344 3.851051 TGCATCGCACCAGAACATA 57.149 47.368 0.00 0.00 31.71 2.29
344 345 4.720127 TGCATCGCACCAGAACAT 57.280 50.000 0.00 0.00 31.71 2.71
353 354 2.505635 ATCCGTGACTGTGCATCGCA 62.506 55.000 0.00 0.00 35.60 5.10
354 355 1.811266 ATCCGTGACTGTGCATCGC 60.811 57.895 0.00 0.00 0.00 4.58
355 356 1.423721 CCATCCGTGACTGTGCATCG 61.424 60.000 0.00 0.00 0.00 3.84
356 357 0.108186 TCCATCCGTGACTGTGCATC 60.108 55.000 0.00 0.00 0.00 3.91
357 358 0.391661 GTCCATCCGTGACTGTGCAT 60.392 55.000 0.00 0.00 0.00 3.96
358 359 1.005037 GTCCATCCGTGACTGTGCA 60.005 57.895 0.00 0.00 0.00 4.57
359 360 0.530744 TAGTCCATCCGTGACTGTGC 59.469 55.000 3.30 0.00 42.80 4.57
360 361 2.427095 TGATAGTCCATCCGTGACTGTG 59.573 50.000 3.30 0.00 42.80 3.66
361 362 2.690497 CTGATAGTCCATCCGTGACTGT 59.310 50.000 3.30 0.00 42.80 3.55
362 363 2.035193 CCTGATAGTCCATCCGTGACTG 59.965 54.545 3.30 0.00 42.80 3.51
363 364 2.091830 TCCTGATAGTCCATCCGTGACT 60.092 50.000 0.00 0.00 44.85 3.41
364 365 2.034812 GTCCTGATAGTCCATCCGTGAC 59.965 54.545 0.00 0.00 32.09 3.67
365 366 2.091830 AGTCCTGATAGTCCATCCGTGA 60.092 50.000 0.00 0.00 32.09 4.35
366 367 2.311463 AGTCCTGATAGTCCATCCGTG 58.689 52.381 0.00 0.00 32.09 4.94
367 368 2.757894 AGTCCTGATAGTCCATCCGT 57.242 50.000 0.00 0.00 32.09 4.69
368 369 2.484651 CGTAGTCCTGATAGTCCATCCG 59.515 54.545 0.00 0.00 32.09 4.18
369 370 2.820787 CCGTAGTCCTGATAGTCCATCC 59.179 54.545 0.00 0.00 32.09 3.51
370 371 3.752665 TCCGTAGTCCTGATAGTCCATC 58.247 50.000 0.00 0.00 0.00 3.51
371 372 3.394940 TCTCCGTAGTCCTGATAGTCCAT 59.605 47.826 0.00 0.00 0.00 3.41
372 373 2.775960 TCTCCGTAGTCCTGATAGTCCA 59.224 50.000 0.00 0.00 0.00 4.02
373 374 3.488778 TCTCCGTAGTCCTGATAGTCC 57.511 52.381 0.00 0.00 0.00 3.85
374 375 4.214545 CACATCTCCGTAGTCCTGATAGTC 59.785 50.000 0.00 0.00 0.00 2.59
375 376 4.138290 CACATCTCCGTAGTCCTGATAGT 58.862 47.826 0.00 0.00 0.00 2.12
376 377 3.504134 CCACATCTCCGTAGTCCTGATAG 59.496 52.174 0.00 0.00 0.00 2.08
377 378 3.117625 ACCACATCTCCGTAGTCCTGATA 60.118 47.826 0.00 0.00 0.00 2.15
378 379 2.311463 CCACATCTCCGTAGTCCTGAT 58.689 52.381 0.00 0.00 0.00 2.90
379 380 1.005569 ACCACATCTCCGTAGTCCTGA 59.994 52.381 0.00 0.00 0.00 3.86
380 381 1.405821 GACCACATCTCCGTAGTCCTG 59.594 57.143 0.00 0.00 0.00 3.86
381 382 1.765230 GACCACATCTCCGTAGTCCT 58.235 55.000 0.00 0.00 0.00 3.85
382 383 0.381089 CGACCACATCTCCGTAGTCC 59.619 60.000 0.00 0.00 0.00 3.85
383 384 1.093159 ACGACCACATCTCCGTAGTC 58.907 55.000 0.00 0.00 33.13 2.59
384 385 0.809385 CACGACCACATCTCCGTAGT 59.191 55.000 0.00 0.00 33.62 2.73
385 386 0.809385 ACACGACCACATCTCCGTAG 59.191 55.000 0.00 0.00 33.62 3.51
386 387 1.250328 AACACGACCACATCTCCGTA 58.750 50.000 0.00 0.00 33.62 4.02
387 388 0.391597 AAACACGACCACATCTCCGT 59.608 50.000 0.00 0.00 35.46 4.69
388 389 0.790207 CAAACACGACCACATCTCCG 59.210 55.000 0.00 0.00 0.00 4.63
389 390 1.798813 GTCAAACACGACCACATCTCC 59.201 52.381 0.00 0.00 0.00 3.71
390 391 2.479837 TGTCAAACACGACCACATCTC 58.520 47.619 0.00 0.00 34.88 2.75
391 392 2.612212 GTTGTCAAACACGACCACATCT 59.388 45.455 0.00 0.00 36.24 2.90
392 393 2.353269 TGTTGTCAAACACGACCACATC 59.647 45.455 0.00 0.00 41.41 3.06
393 394 2.360844 TGTTGTCAAACACGACCACAT 58.639 42.857 0.00 0.00 41.41 3.21
394 395 1.809684 TGTTGTCAAACACGACCACA 58.190 45.000 0.00 0.00 41.41 4.17
402 403 9.061435 TGTTCATCTTATATGTGTTGTCAAACA 57.939 29.630 0.00 0.00 44.06 2.83
403 404 9.546909 CTGTTCATCTTATATGTGTTGTCAAAC 57.453 33.333 0.00 0.00 36.78 2.93
404 405 9.500785 TCTGTTCATCTTATATGTGTTGTCAAA 57.499 29.630 0.00 0.00 0.00 2.69
405 406 9.671279 ATCTGTTCATCTTATATGTGTTGTCAA 57.329 29.630 0.00 0.00 0.00 3.18
416 417 9.045745 TGGCATACCATATCTGTTCATCTTATA 57.954 33.333 0.00 0.00 42.67 0.98
417 418 7.921304 TGGCATACCATATCTGTTCATCTTAT 58.079 34.615 0.00 0.00 42.67 1.73
418 419 7.315066 TGGCATACCATATCTGTTCATCTTA 57.685 36.000 0.00 0.00 42.67 2.10
419 420 6.191657 TGGCATACCATATCTGTTCATCTT 57.808 37.500 0.00 0.00 42.67 2.40
420 421 5.830799 TGGCATACCATATCTGTTCATCT 57.169 39.130 0.00 0.00 42.67 2.90
434 435 0.779997 AGGGGATGGAATGGCATACC 59.220 55.000 0.00 0.00 0.00 2.73
435 436 2.629617 CAAAGGGGATGGAATGGCATAC 59.370 50.000 0.00 0.00 0.00 2.39
436 437 2.247111 ACAAAGGGGATGGAATGGCATA 59.753 45.455 0.00 0.00 0.00 3.14
437 438 1.008693 ACAAAGGGGATGGAATGGCAT 59.991 47.619 0.00 0.00 0.00 4.40
438 439 0.413037 ACAAAGGGGATGGAATGGCA 59.587 50.000 0.00 0.00 0.00 4.92
439 440 1.114627 GACAAAGGGGATGGAATGGC 58.885 55.000 0.00 0.00 0.00 4.40
440 441 1.392589 CGACAAAGGGGATGGAATGG 58.607 55.000 0.00 0.00 0.00 3.16
441 442 0.740737 GCGACAAAGGGGATGGAATG 59.259 55.000 0.00 0.00 0.00 2.67
442 443 0.625849 AGCGACAAAGGGGATGGAAT 59.374 50.000 0.00 0.00 0.00 3.01
443 444 0.322456 CAGCGACAAAGGGGATGGAA 60.322 55.000 0.00 0.00 0.00 3.53
444 445 1.299648 CAGCGACAAAGGGGATGGA 59.700 57.895 0.00 0.00 0.00 3.41
445 446 0.609131 AACAGCGACAAAGGGGATGG 60.609 55.000 0.00 0.00 0.00 3.51
446 447 2.107950 TAACAGCGACAAAGGGGATG 57.892 50.000 0.00 0.00 0.00 3.51
447 448 2.871096 TTAACAGCGACAAAGGGGAT 57.129 45.000 0.00 0.00 0.00 3.85
448 449 2.871096 ATTAACAGCGACAAAGGGGA 57.129 45.000 0.00 0.00 0.00 4.81
449 450 3.128068 GGTTATTAACAGCGACAAAGGGG 59.872 47.826 8.73 0.00 0.00 4.79
450 451 3.754323 TGGTTATTAACAGCGACAAAGGG 59.246 43.478 8.73 0.00 0.00 3.95
451 452 4.379082 GGTGGTTATTAACAGCGACAAAGG 60.379 45.833 8.73 0.00 0.00 3.11
452 453 4.719040 GGTGGTTATTAACAGCGACAAAG 58.281 43.478 8.73 0.00 0.00 2.77
453 454 4.752661 GGTGGTTATTAACAGCGACAAA 57.247 40.909 8.73 0.00 0.00 2.83
459 460 2.226912 TGCAACGGTGGTTATTAACAGC 59.773 45.455 0.90 4.18 33.72 4.40
460 461 3.365565 GGTGCAACGGTGGTTATTAACAG 60.366 47.826 0.90 0.30 38.12 3.16
461 462 2.553172 GGTGCAACGGTGGTTATTAACA 59.447 45.455 0.90 0.00 38.12 2.41
462 463 2.553172 TGGTGCAACGGTGGTTATTAAC 59.447 45.455 0.90 0.00 38.12 2.01
463 464 2.553172 GTGGTGCAACGGTGGTTATTAA 59.447 45.455 0.90 0.00 38.12 1.40
464 465 2.152830 GTGGTGCAACGGTGGTTATTA 58.847 47.619 0.90 0.00 38.12 0.98
465 466 0.955905 GTGGTGCAACGGTGGTTATT 59.044 50.000 0.90 0.00 38.12 1.40
466 467 0.109723 AGTGGTGCAACGGTGGTTAT 59.890 50.000 0.90 0.00 38.12 1.89
467 468 0.816018 CAGTGGTGCAACGGTGGTTA 60.816 55.000 0.90 0.00 38.12 2.85
468 469 2.118404 CAGTGGTGCAACGGTGGTT 61.118 57.895 0.90 0.00 38.12 3.67
469 470 2.515991 CAGTGGTGCAACGGTGGT 60.516 61.111 0.90 0.00 38.12 4.16
470 471 1.662438 AAACAGTGGTGCAACGGTGG 61.662 55.000 0.90 0.00 38.12 4.61
471 472 0.172352 AAAACAGTGGTGCAACGGTG 59.828 50.000 0.00 0.00 38.12 4.94
472 473 0.892063 AAAAACAGTGGTGCAACGGT 59.108 45.000 0.00 0.00 38.12 4.83
473 474 1.276415 CAAAAACAGTGGTGCAACGG 58.724 50.000 0.00 0.00 38.12 4.44
474 475 1.276415 CCAAAAACAGTGGTGCAACG 58.724 50.000 0.00 0.00 38.12 4.10
481 482 1.151172 GGCGCAACCAAAAACAGTGG 61.151 55.000 10.83 0.00 42.28 4.00
482 483 2.296658 GGCGCAACCAAAAACAGTG 58.703 52.632 10.83 0.00 38.86 3.66
483 484 4.825377 GGCGCAACCAAAAACAGT 57.175 50.000 10.83 0.00 38.86 3.55
492 493 2.682856 TCTCAGAAATAATGGCGCAACC 59.317 45.455 10.83 0.00 39.84 3.77
493 494 3.623060 TCTCTCAGAAATAATGGCGCAAC 59.377 43.478 10.83 0.00 0.00 4.17
494 495 3.623060 GTCTCTCAGAAATAATGGCGCAA 59.377 43.478 10.83 0.00 0.00 4.85
495 496 3.198068 GTCTCTCAGAAATAATGGCGCA 58.802 45.455 10.83 0.00 0.00 6.09
496 497 2.545946 GGTCTCTCAGAAATAATGGCGC 59.454 50.000 0.00 0.00 0.00 6.53
497 498 3.797039 TGGTCTCTCAGAAATAATGGCG 58.203 45.455 0.00 0.00 0.00 5.69
498 499 5.882557 TCTTTGGTCTCTCAGAAATAATGGC 59.117 40.000 0.00 0.00 0.00 4.40
499 500 7.279758 GTCTCTTTGGTCTCTCAGAAATAATGG 59.720 40.741 0.00 0.00 0.00 3.16
500 501 7.009999 CGTCTCTTTGGTCTCTCAGAAATAATG 59.990 40.741 0.00 0.00 0.00 1.90
501 502 7.038659 CGTCTCTTTGGTCTCTCAGAAATAAT 58.961 38.462 0.00 0.00 0.00 1.28
502 503 6.015350 ACGTCTCTTTGGTCTCTCAGAAATAA 60.015 38.462 0.00 0.00 0.00 1.40
503 504 5.477291 ACGTCTCTTTGGTCTCTCAGAAATA 59.523 40.000 0.00 0.00 0.00 1.40
504 505 4.282195 ACGTCTCTTTGGTCTCTCAGAAAT 59.718 41.667 0.00 0.00 0.00 2.17
505 506 3.637229 ACGTCTCTTTGGTCTCTCAGAAA 59.363 43.478 0.00 0.00 0.00 2.52
506 507 3.223435 ACGTCTCTTTGGTCTCTCAGAA 58.777 45.455 0.00 0.00 0.00 3.02
507 508 2.865079 ACGTCTCTTTGGTCTCTCAGA 58.135 47.619 0.00 0.00 0.00 3.27
508 509 3.502595 TGTACGTCTCTTTGGTCTCTCAG 59.497 47.826 0.00 0.00 0.00 3.35
509 510 3.483421 TGTACGTCTCTTTGGTCTCTCA 58.517 45.455 0.00 0.00 0.00 3.27
510 511 4.082679 ACATGTACGTCTCTTTGGTCTCTC 60.083 45.833 0.00 0.00 0.00 3.20
511 512 3.827302 ACATGTACGTCTCTTTGGTCTCT 59.173 43.478 0.00 0.00 0.00 3.10
512 513 3.921021 CACATGTACGTCTCTTTGGTCTC 59.079 47.826 0.00 0.00 0.00 3.36
513 514 3.306088 CCACATGTACGTCTCTTTGGTCT 60.306 47.826 0.00 0.00 0.00 3.85
514 515 2.993899 CCACATGTACGTCTCTTTGGTC 59.006 50.000 0.00 0.00 0.00 4.02
515 516 2.870435 GCCACATGTACGTCTCTTTGGT 60.870 50.000 0.00 0.00 0.00 3.67
516 517 1.732259 GCCACATGTACGTCTCTTTGG 59.268 52.381 0.00 0.00 0.00 3.28
517 518 2.688507 AGCCACATGTACGTCTCTTTG 58.311 47.619 0.00 0.00 0.00 2.77
518 519 3.006967 AGAAGCCACATGTACGTCTCTTT 59.993 43.478 0.00 0.00 0.00 2.52
519 520 2.563179 AGAAGCCACATGTACGTCTCTT 59.437 45.455 0.00 0.00 0.00 2.85
520 521 2.164624 GAGAAGCCACATGTACGTCTCT 59.835 50.000 24.27 13.39 36.43 3.10
521 522 2.531206 GAGAAGCCACATGTACGTCTC 58.469 52.381 20.30 20.30 33.08 3.36
522 523 1.204941 GGAGAAGCCACATGTACGTCT 59.795 52.381 13.76 13.76 36.34 4.18
523 524 1.067142 TGGAGAAGCCACATGTACGTC 60.067 52.381 0.00 1.81 43.33 4.34
524 525 0.973632 TGGAGAAGCCACATGTACGT 59.026 50.000 0.00 0.00 43.33 3.57
525 526 1.204704 TCTGGAGAAGCCACATGTACG 59.795 52.381 0.00 0.00 43.33 3.67
526 527 2.028112 TGTCTGGAGAAGCCACATGTAC 60.028 50.000 0.00 0.00 43.33 2.90
527 528 2.256306 TGTCTGGAGAAGCCACATGTA 58.744 47.619 0.00 0.00 43.33 2.29
528 529 1.059098 TGTCTGGAGAAGCCACATGT 58.941 50.000 0.00 0.00 43.33 3.21
529 530 2.093075 AGATGTCTGGAGAAGCCACATG 60.093 50.000 0.00 0.00 43.33 3.21
530 531 2.194859 AGATGTCTGGAGAAGCCACAT 58.805 47.619 0.00 0.00 43.33 3.21
531 532 1.649321 AGATGTCTGGAGAAGCCACA 58.351 50.000 0.00 0.00 43.33 4.17
532 533 3.386078 TCATAGATGTCTGGAGAAGCCAC 59.614 47.826 0.00 0.00 43.33 5.01
533 534 3.640498 CTCATAGATGTCTGGAGAAGCCA 59.360 47.826 7.40 0.00 46.96 4.75
534 535 3.006752 CCTCATAGATGTCTGGAGAAGCC 59.993 52.174 12.37 0.00 33.37 4.35
535 536 3.554752 GCCTCATAGATGTCTGGAGAAGC 60.555 52.174 12.37 6.90 33.37 3.86
536 537 3.640498 TGCCTCATAGATGTCTGGAGAAG 59.360 47.826 12.37 2.40 33.37 2.85
537 538 3.646534 TGCCTCATAGATGTCTGGAGAA 58.353 45.455 12.37 2.19 33.37 2.87
538 539 3.319031 TGCCTCATAGATGTCTGGAGA 57.681 47.619 12.37 0.00 33.37 3.71
539 540 4.125703 GTTTGCCTCATAGATGTCTGGAG 58.874 47.826 6.57 6.57 0.00 3.86
540 541 3.776969 AGTTTGCCTCATAGATGTCTGGA 59.223 43.478 0.00 0.00 0.00 3.86
541 542 3.875727 CAGTTTGCCTCATAGATGTCTGG 59.124 47.826 0.00 0.00 0.00 3.86
542 543 4.511527 ACAGTTTGCCTCATAGATGTCTG 58.488 43.478 0.00 0.00 0.00 3.51
543 544 4.223700 TGACAGTTTGCCTCATAGATGTCT 59.776 41.667 0.00 0.00 37.34 3.41
544 545 4.507710 TGACAGTTTGCCTCATAGATGTC 58.492 43.478 0.00 0.00 37.05 3.06
545 546 4.511527 CTGACAGTTTGCCTCATAGATGT 58.488 43.478 0.00 0.00 0.00 3.06
546 547 3.311871 GCTGACAGTTTGCCTCATAGATG 59.688 47.826 3.99 0.00 0.00 2.90
547 548 3.054875 TGCTGACAGTTTGCCTCATAGAT 60.055 43.478 3.99 0.00 0.00 1.98
548 549 2.302733 TGCTGACAGTTTGCCTCATAGA 59.697 45.455 3.99 0.00 0.00 1.98
549 550 2.676839 CTGCTGACAGTTTGCCTCATAG 59.323 50.000 3.99 0.00 39.22 2.23
550 551 2.302733 TCTGCTGACAGTTTGCCTCATA 59.697 45.455 3.99 0.00 44.77 2.15
551 552 1.072806 TCTGCTGACAGTTTGCCTCAT 59.927 47.619 3.99 0.00 44.77 2.90
552 553 0.469494 TCTGCTGACAGTTTGCCTCA 59.531 50.000 3.99 0.00 44.77 3.86
553 554 0.871057 GTCTGCTGACAGTTTGCCTC 59.129 55.000 17.89 0.00 44.77 4.70
554 555 3.012560 GTCTGCTGACAGTTTGCCT 57.987 52.632 17.89 0.00 44.77 4.75
563 564 4.094294 TGTTTTGTTGTAGTGTCTGCTGAC 59.906 41.667 16.18 16.18 43.20 3.51
564 565 4.257731 TGTTTTGTTGTAGTGTCTGCTGA 58.742 39.130 0.00 0.00 0.00 4.26
565 566 4.614555 TGTTTTGTTGTAGTGTCTGCTG 57.385 40.909 0.00 0.00 0.00 4.41
566 567 4.640201 ACATGTTTTGTTGTAGTGTCTGCT 59.360 37.500 0.00 0.00 33.74 4.24
567 568 4.920376 ACATGTTTTGTTGTAGTGTCTGC 58.080 39.130 0.00 0.00 33.74 4.26
568 569 6.117911 TGACATGTTTTGTTGTAGTGTCTG 57.882 37.500 0.00 0.00 39.18 3.51
569 570 5.880332 ACTGACATGTTTTGTTGTAGTGTCT 59.120 36.000 0.00 0.00 39.18 3.41
570 571 6.119144 ACTGACATGTTTTGTTGTAGTGTC 57.881 37.500 0.00 0.00 39.18 3.67
634 635 6.370166 GTCCCTACATATTAGATGCTTTCAGC 59.630 42.308 0.00 0.00 42.82 4.26
745 746 7.147312 TCCTAAAACGTCTCAAAAATCGTCTA 58.853 34.615 0.00 0.00 35.49 2.59
829 832 0.609681 TGGCGGCGGATAAGGTTTTT 60.610 50.000 9.78 0.00 0.00 1.94
1052 2379 4.660938 GGCGACCAGGCAAAGGGT 62.661 66.667 0.00 0.00 45.92 4.34
1208 2540 1.687612 CCTGTCCCAGCCTGATTGT 59.312 57.895 0.00 0.00 0.00 2.71
1212 2544 2.409984 TTACCCCTGTCCCAGCCTGA 62.410 60.000 0.00 0.00 0.00 3.86
1433 2788 1.064979 ACACCGGGTGTTGAAACTTCT 60.065 47.619 26.70 0.05 45.08 2.85
1496 2851 2.238646 AGCCAAAGACAATGGTCCGATA 59.761 45.455 0.00 0.00 45.48 2.92
1506 2861 3.368948 GGGTTGTTTGAAGCCAAAGACAA 60.369 43.478 0.00 0.00 42.37 3.18
1569 2924 6.038382 TGCCGAAAACTTCAATACAAAGTACA 59.962 34.615 0.00 0.00 35.96 2.90
1570 2925 6.432107 TGCCGAAAACTTCAATACAAAGTAC 58.568 36.000 0.00 0.00 35.96 2.73
1577 2932 6.763303 AAAACATGCCGAAAACTTCAATAC 57.237 33.333 0.00 0.00 0.00 1.89
1809 3169 5.604231 AGTTCAGTTCATCCTAGCATATGGA 59.396 40.000 4.56 0.00 36.72 3.41
1923 3285 3.360340 GCAAGGCAGCGAGCTTGT 61.360 61.111 2.14 0.00 44.79 3.16
2086 3456 2.564947 AGACTGCAGCTACTTACTTGCT 59.435 45.455 15.27 0.00 37.45 3.91
2111 3481 8.464770 TTGCTGATTTCTTTATCAAAAATCCG 57.535 30.769 0.00 0.00 38.19 4.18
2126 3496 1.881973 TGAGTGGCACTTGCTGATTTC 59.118 47.619 22.98 6.19 41.70 2.17
2203 3574 8.860088 CCTTCAGGAAAAAGAGATTTTTAGGAA 58.140 33.333 6.26 6.42 41.27 3.36
2213 3584 6.317893 GTGTTTACACCTTCAGGAAAAAGAGA 59.682 38.462 0.00 0.00 40.85 3.10
2252 3630 7.669438 CATTCTAAATTTCTAATGCACACGG 57.331 36.000 10.70 0.00 0.00 4.94
2401 3787 7.283127 CAGAAAGTTATGTGTGCCTAACCATAT 59.717 37.037 0.00 0.00 0.00 1.78
2446 3833 1.789078 GCCACAACTGTGTCAGCCAG 61.789 60.000 8.93 0.00 44.21 4.85
2596 3993 6.659745 AACTTAAGACCAATTTAACACCCC 57.340 37.500 10.09 0.00 0.00 4.95
2663 4061 7.495901 ACGAGTCAGATAAGACATCATTGAAT 58.504 34.615 0.00 0.00 40.98 2.57
2858 8103 2.089201 CCCCGTCTATGTTGGGTTTTC 58.911 52.381 0.00 0.00 41.63 2.29
2870 8115 2.304092 CACTATAGCACACCCCGTCTA 58.696 52.381 0.00 0.00 0.00 2.59
2872 8117 0.104304 CCACTATAGCACACCCCGTC 59.896 60.000 0.00 0.00 0.00 4.79
2906 8151 1.691976 TCATCGTGTGGAACCTGAAGT 59.308 47.619 0.00 0.00 34.36 3.01
2992 8238 5.475909 AGATGCCACTTAATCTGCCATAATG 59.524 40.000 0.00 0.00 31.89 1.90
3011 8257 8.867112 ATCATTGTATGACAATTCAAAGATGC 57.133 30.769 2.09 0.00 45.80 3.91
3082 8328 5.125100 TCATCTGTTTGAATGCCAACTTC 57.875 39.130 0.00 0.00 33.85 3.01
3150 8396 5.743636 AAGGATCATCTTCTAGCTCATCC 57.256 43.478 0.00 0.00 0.00 3.51
3162 8408 6.836007 GGGAGGAAAATACAAAAGGATCATCT 59.164 38.462 0.00 0.00 0.00 2.90
3206 8528 5.360714 AGTTCAGCTTTTGGATCTTGAACAA 59.639 36.000 15.04 0.00 37.46 2.83
3260 8582 4.081862 CAGCACCCATGTCAAAAAGATCAT 60.082 41.667 0.00 0.00 0.00 2.45
3281 8603 7.387119 TCTGTTTCATCCAATGATTCTTCAG 57.613 36.000 0.00 0.00 39.39 3.02
3293 8615 6.094464 CACAATGCTCTAATCTGTTTCATCCA 59.906 38.462 0.00 0.00 0.00 3.41
3653 9035 4.211374 GCAGTCATGTAAAAGACGAGTGTT 59.789 41.667 0.00 0.00 39.67 3.32
3698 9080 9.853555 CAAACACACATTAATTCCATTTAGCTA 57.146 29.630 0.00 0.00 0.00 3.32
3716 9098 7.927048 ACCTAGTTTCTTACATTCAAACACAC 58.073 34.615 0.00 0.00 33.26 3.82
3743 9125 6.413052 AGACAAAAGCACATCAGTCTGATAT 58.587 36.000 15.05 0.69 34.28 1.63
3769 9151 2.697229 TGGCAACACATTTGACAATGGA 59.303 40.909 0.00 0.00 46.17 3.41
3834 9216 1.032014 GCCAGTTTGCCACTTCTGAA 58.968 50.000 0.00 0.00 30.92 3.02
3881 9263 4.860802 AATGACTTGGTCCATGGACATA 57.139 40.909 38.83 26.99 46.20 2.29
3976 9358 6.492087 AGCTGGTACTAAAATGGTAGCAAAAA 59.508 34.615 0.00 0.00 43.74 1.94
3991 9373 5.429681 TCTAAATTTGGCAGCTGGTACTA 57.570 39.130 17.12 0.00 0.00 1.82
4203 9850 9.072294 GTCCTTGTGTTAAAATTTCATAATCCG 57.928 33.333 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.