Multiple sequence alignment - TraesCS5B01G491400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G491400 | chr5B | 100.000 | 3016 | 0 | 0 | 1 | 3016 | 659760625 | 659763640 | 0.000000e+00 | 5570.0 |
1 | TraesCS5B01G491400 | chr5B | 89.272 | 783 | 71 | 7 | 1 | 778 | 143297714 | 143298488 | 0.000000e+00 | 968.0 |
2 | TraesCS5B01G491400 | chr5B | 80.000 | 315 | 59 | 4 | 2372 | 2683 | 388983858 | 388984171 | 2.340000e-56 | 230.0 |
3 | TraesCS5B01G491400 | chr5A | 88.838 | 878 | 57 | 16 | 1495 | 2366 | 651795251 | 651796093 | 0.000000e+00 | 1040.0 |
4 | TraesCS5B01G491400 | chr5A | 92.029 | 414 | 26 | 3 | 2373 | 2780 | 641684924 | 641685336 | 2.610000e-160 | 575.0 |
5 | TraesCS5B01G491400 | chr5A | 92.526 | 388 | 17 | 4 | 2635 | 3010 | 395881962 | 395881575 | 2.040000e-151 | 545.0 |
6 | TraesCS5B01G491400 | chr5A | 87.328 | 363 | 40 | 1 | 2373 | 2729 | 374911043 | 374911405 | 7.780000e-111 | 411.0 |
7 | TraesCS5B01G491400 | chr5A | 77.351 | 521 | 107 | 3 | 2373 | 2887 | 553168388 | 553168903 | 6.320000e-77 | 298.0 |
8 | TraesCS5B01G491400 | chr5A | 89.956 | 229 | 17 | 3 | 783 | 1005 | 651793162 | 651793390 | 1.060000e-74 | 291.0 |
9 | TraesCS5B01G491400 | chr5A | 91.534 | 189 | 11 | 5 | 2827 | 3010 | 641685332 | 641685520 | 3.860000e-64 | 255.0 |
10 | TraesCS5B01G491400 | chr5A | 96.970 | 33 | 1 | 0 | 1435 | 1467 | 317345567 | 317345599 | 4.200000e-04 | 56.5 |
11 | TraesCS5B01G491400 | chr1D | 95.566 | 654 | 17 | 3 | 2371 | 3012 | 53871898 | 53872551 | 0.000000e+00 | 1037.0 |
12 | TraesCS5B01G491400 | chr2B | 90.063 | 795 | 67 | 6 | 1 | 783 | 781116716 | 781115922 | 0.000000e+00 | 1020.0 |
13 | TraesCS5B01G491400 | chr2B | 86.490 | 792 | 91 | 15 | 3 | 783 | 157299119 | 157299905 | 0.000000e+00 | 856.0 |
14 | TraesCS5B01G491400 | chr2B | 86.935 | 199 | 18 | 6 | 1228 | 1418 | 338749467 | 338749665 | 1.820000e-52 | 217.0 |
15 | TraesCS5B01G491400 | chr3B | 93.588 | 655 | 28 | 4 | 2372 | 3012 | 751838136 | 751837482 | 0.000000e+00 | 965.0 |
16 | TraesCS5B01G491400 | chr3B | 93.228 | 635 | 29 | 4 | 2390 | 3012 | 751853591 | 751852959 | 0.000000e+00 | 922.0 |
17 | TraesCS5B01G491400 | chr3B | 87.374 | 198 | 17 | 5 | 1229 | 1418 | 630594351 | 630594154 | 1.410000e-53 | 220.0 |
18 | TraesCS5B01G491400 | chr1B | 87.392 | 809 | 60 | 16 | 1 | 785 | 468502164 | 468501374 | 0.000000e+00 | 891.0 |
19 | TraesCS5B01G491400 | chr1B | 85.606 | 792 | 99 | 13 | 1 | 783 | 666349959 | 666350744 | 0.000000e+00 | 817.0 |
20 | TraesCS5B01G491400 | chr6D | 86.020 | 794 | 93 | 16 | 1 | 785 | 407209590 | 407210374 | 0.000000e+00 | 835.0 |
21 | TraesCS5B01G491400 | chr7A | 89.666 | 658 | 55 | 4 | 2366 | 3010 | 42007220 | 42006563 | 0.000000e+00 | 826.0 |
22 | TraesCS5B01G491400 | chrUn | 85.732 | 792 | 98 | 13 | 1 | 783 | 259905764 | 259904979 | 0.000000e+00 | 822.0 |
23 | TraesCS5B01G491400 | chrUn | 85.606 | 792 | 99 | 13 | 1 | 783 | 310267250 | 310266465 | 0.000000e+00 | 817.0 |
24 | TraesCS5B01G491400 | chrUn | 85.606 | 792 | 99 | 13 | 1 | 783 | 334995099 | 334995884 | 0.000000e+00 | 817.0 |
25 | TraesCS5B01G491400 | chrUn | 85.714 | 217 | 18 | 11 | 1227 | 1433 | 87983402 | 87983189 | 1.820000e-52 | 217.0 |
26 | TraesCS5B01G491400 | chr3D | 88.685 | 654 | 62 | 4 | 2371 | 3012 | 567513418 | 567512765 | 0.000000e+00 | 787.0 |
27 | TraesCS5B01G491400 | chr3D | 89.535 | 172 | 10 | 5 | 1229 | 1392 | 581983445 | 581983616 | 8.470000e-51 | 211.0 |
28 | TraesCS5B01G491400 | chr4A | 84.454 | 714 | 97 | 13 | 78 | 785 | 657083022 | 657082317 | 0.000000e+00 | 691.0 |
29 | TraesCS5B01G491400 | chr4A | 86.486 | 222 | 28 | 2 | 2366 | 2585 | 585674956 | 585674735 | 3.000000e-60 | 243.0 |
30 | TraesCS5B01G491400 | chr2A | 82.965 | 769 | 101 | 22 | 32 | 783 | 775208039 | 775207284 | 0.000000e+00 | 667.0 |
31 | TraesCS5B01G491400 | chr2A | 87.907 | 215 | 16 | 7 | 1229 | 1434 | 303859439 | 303859226 | 8.350000e-61 | 244.0 |
32 | TraesCS5B01G491400 | chr1A | 92.239 | 451 | 23 | 4 | 2373 | 2812 | 575565199 | 575564750 | 1.970000e-176 | 628.0 |
33 | TraesCS5B01G491400 | chr1A | 83.406 | 229 | 34 | 4 | 2373 | 2599 | 574215896 | 574216122 | 3.050000e-50 | 209.0 |
34 | TraesCS5B01G491400 | chr1A | 78.125 | 320 | 54 | 14 | 2372 | 2683 | 531593142 | 531592831 | 3.970000e-44 | 189.0 |
35 | TraesCS5B01G491400 | chr1A | 91.667 | 48 | 3 | 1 | 2391 | 2437 | 128812550 | 128812503 | 6.980000e-07 | 65.8 |
36 | TraesCS5B01G491400 | chr5D | 90.435 | 460 | 25 | 10 | 1929 | 2382 | 525392285 | 525392731 | 3.350000e-164 | 588.0 |
37 | TraesCS5B01G491400 | chr5D | 89.819 | 442 | 29 | 11 | 1479 | 1916 | 525391785 | 525392214 | 1.220000e-153 | 553.0 |
38 | TraesCS5B01G491400 | chr5D | 86.563 | 387 | 26 | 7 | 783 | 1154 | 525391420 | 525391795 | 1.300000e-108 | 403.0 |
39 | TraesCS5B01G491400 | chr7B | 80.000 | 315 | 59 | 4 | 2372 | 2683 | 73000942 | 73000629 | 2.340000e-56 | 230.0 |
40 | TraesCS5B01G491400 | chr7B | 82.949 | 217 | 26 | 10 | 1226 | 1433 | 560501034 | 560501248 | 5.130000e-43 | 185.0 |
41 | TraesCS5B01G491400 | chr7B | 75.926 | 162 | 32 | 7 | 2395 | 2553 | 624787589 | 624787746 | 3.220000e-10 | 76.8 |
42 | TraesCS5B01G491400 | chr3A | 86.603 | 209 | 26 | 2 | 1226 | 1433 | 686615575 | 686615368 | 2.340000e-56 | 230.0 |
43 | TraesCS5B01G491400 | chr6B | 86.802 | 197 | 19 | 5 | 1229 | 1418 | 73159169 | 73158973 | 2.360000e-51 | 213.0 |
44 | TraesCS5B01G491400 | chr4B | 83.562 | 219 | 21 | 13 | 1228 | 1433 | 59226348 | 59226564 | 1.100000e-44 | 191.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G491400 | chr5B | 659760625 | 659763640 | 3015 | False | 5570.000000 | 5570 | 100.0000 | 1 | 3016 | 1 | chr5B.!!$F3 | 3015 |
1 | TraesCS5B01G491400 | chr5B | 143297714 | 143298488 | 774 | False | 968.000000 | 968 | 89.2720 | 1 | 778 | 1 | chr5B.!!$F1 | 777 |
2 | TraesCS5B01G491400 | chr5A | 651793162 | 651796093 | 2931 | False | 665.500000 | 1040 | 89.3970 | 783 | 2366 | 2 | chr5A.!!$F5 | 1583 |
3 | TraesCS5B01G491400 | chr5A | 641684924 | 641685520 | 596 | False | 415.000000 | 575 | 91.7815 | 2373 | 3010 | 2 | chr5A.!!$F4 | 637 |
4 | TraesCS5B01G491400 | chr5A | 553168388 | 553168903 | 515 | False | 298.000000 | 298 | 77.3510 | 2373 | 2887 | 1 | chr5A.!!$F3 | 514 |
5 | TraesCS5B01G491400 | chr1D | 53871898 | 53872551 | 653 | False | 1037.000000 | 1037 | 95.5660 | 2371 | 3012 | 1 | chr1D.!!$F1 | 641 |
6 | TraesCS5B01G491400 | chr2B | 781115922 | 781116716 | 794 | True | 1020.000000 | 1020 | 90.0630 | 1 | 783 | 1 | chr2B.!!$R1 | 782 |
7 | TraesCS5B01G491400 | chr2B | 157299119 | 157299905 | 786 | False | 856.000000 | 856 | 86.4900 | 3 | 783 | 1 | chr2B.!!$F1 | 780 |
8 | TraesCS5B01G491400 | chr3B | 751837482 | 751838136 | 654 | True | 965.000000 | 965 | 93.5880 | 2372 | 3012 | 1 | chr3B.!!$R2 | 640 |
9 | TraesCS5B01G491400 | chr3B | 751852959 | 751853591 | 632 | True | 922.000000 | 922 | 93.2280 | 2390 | 3012 | 1 | chr3B.!!$R3 | 622 |
10 | TraesCS5B01G491400 | chr1B | 468501374 | 468502164 | 790 | True | 891.000000 | 891 | 87.3920 | 1 | 785 | 1 | chr1B.!!$R1 | 784 |
11 | TraesCS5B01G491400 | chr1B | 666349959 | 666350744 | 785 | False | 817.000000 | 817 | 85.6060 | 1 | 783 | 1 | chr1B.!!$F1 | 782 |
12 | TraesCS5B01G491400 | chr6D | 407209590 | 407210374 | 784 | False | 835.000000 | 835 | 86.0200 | 1 | 785 | 1 | chr6D.!!$F1 | 784 |
13 | TraesCS5B01G491400 | chr7A | 42006563 | 42007220 | 657 | True | 826.000000 | 826 | 89.6660 | 2366 | 3010 | 1 | chr7A.!!$R1 | 644 |
14 | TraesCS5B01G491400 | chrUn | 259904979 | 259905764 | 785 | True | 822.000000 | 822 | 85.7320 | 1 | 783 | 1 | chrUn.!!$R2 | 782 |
15 | TraesCS5B01G491400 | chrUn | 310266465 | 310267250 | 785 | True | 817.000000 | 817 | 85.6060 | 1 | 783 | 1 | chrUn.!!$R3 | 782 |
16 | TraesCS5B01G491400 | chrUn | 334995099 | 334995884 | 785 | False | 817.000000 | 817 | 85.6060 | 1 | 783 | 1 | chrUn.!!$F1 | 782 |
17 | TraesCS5B01G491400 | chr3D | 567512765 | 567513418 | 653 | True | 787.000000 | 787 | 88.6850 | 2371 | 3012 | 1 | chr3D.!!$R1 | 641 |
18 | TraesCS5B01G491400 | chr4A | 657082317 | 657083022 | 705 | True | 691.000000 | 691 | 84.4540 | 78 | 785 | 1 | chr4A.!!$R2 | 707 |
19 | TraesCS5B01G491400 | chr2A | 775207284 | 775208039 | 755 | True | 667.000000 | 667 | 82.9650 | 32 | 783 | 1 | chr2A.!!$R2 | 751 |
20 | TraesCS5B01G491400 | chr5D | 525391420 | 525392731 | 1311 | False | 514.666667 | 588 | 88.9390 | 783 | 2382 | 3 | chr5D.!!$F1 | 1599 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
20 | 21 | 0.729116 | CATGTCATCCCAACGCAGAC | 59.271 | 55.0 | 0.00 | 0.0 | 0.0 | 3.51 | F |
83 | 86 | 0.740737 | GCACTGCGATAAGGCCAATT | 59.259 | 50.0 | 5.01 | 0.0 | 0.0 | 2.32 | F |
1101 | 2869 | 0.736636 | AGTGATCATTGTGGCATGCG | 59.263 | 50.0 | 12.44 | 0.0 | 0.0 | 4.73 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1036 | 2803 | 0.471191 | TAGCATGCCTGGACTGGATG | 59.529 | 55.0 | 15.66 | 2.41 | 0.00 | 3.51 | R |
1509 | 3278 | 0.630134 | TGTGGATTCATGGGCATGGA | 59.370 | 50.0 | 0.00 | 0.00 | 39.24 | 3.41 | R |
2175 | 4007 | 0.660300 | GCCAACAAGCTTACACGCAC | 60.660 | 55.0 | 0.00 | 0.00 | 0.00 | 5.34 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 0.729116 | CATGTCATCCCAACGCAGAC | 59.271 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
83 | 86 | 0.740737 | GCACTGCGATAAGGCCAATT | 59.259 | 50.000 | 5.01 | 0.00 | 0.00 | 2.32 |
90 | 93 | 2.023673 | CGATAAGGCCAATTCCTTGCA | 58.976 | 47.619 | 5.01 | 0.00 | 45.51 | 4.08 |
214 | 217 | 3.134792 | GCTCGCTCGTCCTCCTCA | 61.135 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
551 | 569 | 2.815647 | GTGGAAAGCGGCGAGGAG | 60.816 | 66.667 | 12.98 | 0.00 | 0.00 | 3.69 |
631 | 671 | 2.890474 | CGGCGCGCCAAATCTACT | 60.890 | 61.111 | 45.26 | 0.00 | 35.37 | 2.57 |
686 | 727 | 2.394604 | GCTTCCTGGTGCGGTAATC | 58.605 | 57.895 | 0.00 | 0.00 | 0.00 | 1.75 |
792 | 840 | 6.093495 | CGGTTGGAGATGCTCTAAATGTTTTA | 59.907 | 38.462 | 0.00 | 0.00 | 33.06 | 1.52 |
829 | 877 | 3.258872 | CAGATCTGATTTGGTTTTGGCCA | 59.741 | 43.478 | 18.34 | 0.00 | 36.62 | 5.36 |
920 | 979 | 4.202010 | GCAAGGTAATTACACCGCATCATT | 60.202 | 41.667 | 17.16 | 0.00 | 43.84 | 2.57 |
954 | 1016 | 3.186001 | GCATCAGCATCTATCAACTTCCG | 59.814 | 47.826 | 0.00 | 0.00 | 41.58 | 4.30 |
958 | 1020 | 2.432146 | AGCATCTATCAACTTCCGCTGA | 59.568 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
1032 | 2799 | 4.959723 | ACAAAAAGGCATTGTAACTGCAT | 58.040 | 34.783 | 2.12 | 0.00 | 41.47 | 3.96 |
1033 | 2800 | 6.095432 | ACAAAAAGGCATTGTAACTGCATA | 57.905 | 33.333 | 2.12 | 0.00 | 41.47 | 3.14 |
1034 | 2801 | 6.158598 | ACAAAAAGGCATTGTAACTGCATAG | 58.841 | 36.000 | 2.12 | 0.00 | 41.47 | 2.23 |
1035 | 2802 | 6.015519 | ACAAAAAGGCATTGTAACTGCATAGA | 60.016 | 34.615 | 2.12 | 0.00 | 41.47 | 1.98 |
1036 | 2803 | 5.567138 | AAAGGCATTGTAACTGCATAGAC | 57.433 | 39.130 | 0.00 | 0.00 | 41.47 | 2.59 |
1037 | 2804 | 4.220693 | AGGCATTGTAACTGCATAGACA | 57.779 | 40.909 | 0.00 | 0.00 | 41.47 | 3.41 |
1038 | 2805 | 4.785301 | AGGCATTGTAACTGCATAGACAT | 58.215 | 39.130 | 0.00 | 0.00 | 41.47 | 3.06 |
1039 | 2806 | 4.818546 | AGGCATTGTAACTGCATAGACATC | 59.181 | 41.667 | 0.00 | 0.00 | 41.47 | 3.06 |
1040 | 2807 | 4.023707 | GGCATTGTAACTGCATAGACATCC | 60.024 | 45.833 | 0.00 | 0.00 | 41.47 | 3.51 |
1041 | 2808 | 4.576053 | GCATTGTAACTGCATAGACATCCA | 59.424 | 41.667 | 0.00 | 0.00 | 39.46 | 3.41 |
1042 | 2809 | 5.277683 | GCATTGTAACTGCATAGACATCCAG | 60.278 | 44.000 | 0.00 | 0.00 | 39.46 | 3.86 |
1053 | 2820 | 1.077212 | ACATCCAGTCCAGGCATGC | 60.077 | 57.895 | 9.90 | 9.90 | 0.00 | 4.06 |
1069 | 2836 | 1.386525 | ATGCTAAACAGCGGCATGGG | 61.387 | 55.000 | 1.45 | 0.00 | 37.69 | 4.00 |
1071 | 2838 | 2.034843 | TAAACAGCGGCATGGGCA | 59.965 | 55.556 | 1.45 | 0.00 | 43.71 | 5.36 |
1089 | 2856 | 2.627945 | GCACCAAACCGATAGTGATCA | 58.372 | 47.619 | 0.00 | 0.00 | 31.79 | 2.92 |
1097 | 2865 | 2.170397 | ACCGATAGTGATCATTGTGGCA | 59.830 | 45.455 | 0.00 | 0.00 | 31.78 | 4.92 |
1101 | 2869 | 0.736636 | AGTGATCATTGTGGCATGCG | 59.263 | 50.000 | 12.44 | 0.00 | 0.00 | 4.73 |
1106 | 2874 | 1.528129 | TCATTGTGGCATGCGTGTTA | 58.472 | 45.000 | 12.44 | 0.00 | 0.00 | 2.41 |
1107 | 2875 | 1.198867 | TCATTGTGGCATGCGTGTTAC | 59.801 | 47.619 | 12.44 | 7.66 | 0.00 | 2.50 |
1130 | 2898 | 5.415701 | ACTTTGCATTACCAACAGAGGTATG | 59.584 | 40.000 | 0.00 | 0.00 | 43.34 | 2.39 |
1153 | 2921 | 6.310941 | TGGTATTCCAAACAATCTCCAAGAA | 58.689 | 36.000 | 0.00 | 0.00 | 41.25 | 2.52 |
1154 | 2922 | 6.434028 | TGGTATTCCAAACAATCTCCAAGAAG | 59.566 | 38.462 | 0.00 | 0.00 | 41.25 | 2.85 |
1155 | 2923 | 6.434340 | GGTATTCCAAACAATCTCCAAGAAGT | 59.566 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
1156 | 2924 | 7.610305 | GGTATTCCAAACAATCTCCAAGAAGTA | 59.390 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
1157 | 2925 | 7.693969 | ATTCCAAACAATCTCCAAGAAGTAG | 57.306 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1158 | 2926 | 6.187727 | TCCAAACAATCTCCAAGAAGTAGT | 57.812 | 37.500 | 0.00 | 0.00 | 0.00 | 2.73 |
1159 | 2927 | 7.311092 | TCCAAACAATCTCCAAGAAGTAGTA | 57.689 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
1160 | 2928 | 7.386851 | TCCAAACAATCTCCAAGAAGTAGTAG | 58.613 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
1161 | 2929 | 6.092807 | CCAAACAATCTCCAAGAAGTAGTAGC | 59.907 | 42.308 | 0.00 | 0.00 | 0.00 | 3.58 |
1162 | 2930 | 5.346181 | ACAATCTCCAAGAAGTAGTAGCC | 57.654 | 43.478 | 0.00 | 0.00 | 0.00 | 3.93 |
1163 | 2931 | 4.142138 | ACAATCTCCAAGAAGTAGTAGCCG | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 5.52 |
1164 | 2932 | 1.749634 | TCTCCAAGAAGTAGTAGCCGC | 59.250 | 52.381 | 0.00 | 0.00 | 0.00 | 6.53 |
1165 | 2933 | 1.476891 | CTCCAAGAAGTAGTAGCCGCA | 59.523 | 52.381 | 0.00 | 0.00 | 0.00 | 5.69 |
1166 | 2934 | 1.476891 | TCCAAGAAGTAGTAGCCGCAG | 59.523 | 52.381 | 0.00 | 0.00 | 0.00 | 5.18 |
1167 | 2935 | 1.476891 | CCAAGAAGTAGTAGCCGCAGA | 59.523 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
1168 | 2936 | 2.101582 | CCAAGAAGTAGTAGCCGCAGAT | 59.898 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1169 | 2937 | 3.430929 | CCAAGAAGTAGTAGCCGCAGATT | 60.431 | 47.826 | 0.00 | 0.00 | 0.00 | 2.40 |
1170 | 2938 | 3.444703 | AGAAGTAGTAGCCGCAGATTG | 57.555 | 47.619 | 0.00 | 0.00 | 0.00 | 2.67 |
1171 | 2939 | 2.761208 | AGAAGTAGTAGCCGCAGATTGT | 59.239 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
1172 | 2940 | 2.873133 | AGTAGTAGCCGCAGATTGTC | 57.127 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1173 | 2941 | 2.100197 | AGTAGTAGCCGCAGATTGTCA | 58.900 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
1174 | 2942 | 2.099921 | AGTAGTAGCCGCAGATTGTCAG | 59.900 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1175 | 2943 | 1.186200 | AGTAGCCGCAGATTGTCAGA | 58.814 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1176 | 2944 | 1.759445 | AGTAGCCGCAGATTGTCAGAT | 59.241 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
1177 | 2945 | 2.169352 | AGTAGCCGCAGATTGTCAGATT | 59.831 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
1178 | 2946 | 1.376543 | AGCCGCAGATTGTCAGATTG | 58.623 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
1179 | 2947 | 1.065926 | AGCCGCAGATTGTCAGATTGA | 60.066 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
1194 | 2962 | 6.719365 | GTCAGATTGACAACCATATTACTGC | 58.281 | 40.000 | 4.42 | 0.00 | 46.22 | 4.40 |
1195 | 2963 | 6.540189 | GTCAGATTGACAACCATATTACTGCT | 59.460 | 38.462 | 4.42 | 0.00 | 46.22 | 4.24 |
1196 | 2964 | 7.710907 | GTCAGATTGACAACCATATTACTGCTA | 59.289 | 37.037 | 4.42 | 0.00 | 46.22 | 3.49 |
1197 | 2965 | 7.710907 | TCAGATTGACAACCATATTACTGCTAC | 59.289 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
1198 | 2966 | 7.712639 | CAGATTGACAACCATATTACTGCTACT | 59.287 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
1199 | 2967 | 8.924303 | AGATTGACAACCATATTACTGCTACTA | 58.076 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1200 | 2968 | 9.712305 | GATTGACAACCATATTACTGCTACTAT | 57.288 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
1201 | 2969 | 9.712305 | ATTGACAACCATATTACTGCTACTATC | 57.288 | 33.333 | 0.00 | 0.00 | 0.00 | 2.08 |
1202 | 2970 | 8.478775 | TGACAACCATATTACTGCTACTATCT | 57.521 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
1203 | 2971 | 8.577296 | TGACAACCATATTACTGCTACTATCTC | 58.423 | 37.037 | 0.00 | 0.00 | 0.00 | 2.75 |
1204 | 2972 | 7.897864 | ACAACCATATTACTGCTACTATCTCC | 58.102 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
1205 | 2973 | 7.509318 | ACAACCATATTACTGCTACTATCTCCA | 59.491 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
1206 | 2974 | 8.535335 | CAACCATATTACTGCTACTATCTCCAT | 58.465 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
1207 | 2975 | 8.072321 | ACCATATTACTGCTACTATCTCCATG | 57.928 | 38.462 | 0.00 | 0.00 | 0.00 | 3.66 |
1208 | 2976 | 7.676043 | ACCATATTACTGCTACTATCTCCATGT | 59.324 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
1209 | 2977 | 8.194104 | CCATATTACTGCTACTATCTCCATGTC | 58.806 | 40.741 | 0.00 | 0.00 | 0.00 | 3.06 |
1210 | 2978 | 8.965819 | CATATTACTGCTACTATCTCCATGTCT | 58.034 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
1213 | 2981 | 6.832520 | ACTGCTACTATCTCCATGTCTATG | 57.167 | 41.667 | 0.00 | 0.00 | 0.00 | 2.23 |
1214 | 2982 | 6.547402 | ACTGCTACTATCTCCATGTCTATGA | 58.453 | 40.000 | 0.00 | 0.00 | 36.36 | 2.15 |
1215 | 2983 | 7.007116 | ACTGCTACTATCTCCATGTCTATGAA | 58.993 | 38.462 | 0.00 | 0.00 | 36.36 | 2.57 |
1216 | 2984 | 7.673504 | ACTGCTACTATCTCCATGTCTATGAAT | 59.326 | 37.037 | 0.00 | 0.00 | 36.36 | 2.57 |
1217 | 2985 | 8.060931 | TGCTACTATCTCCATGTCTATGAATC | 57.939 | 38.462 | 0.00 | 0.00 | 36.36 | 2.52 |
1218 | 2986 | 7.123397 | TGCTACTATCTCCATGTCTATGAATCC | 59.877 | 40.741 | 0.00 | 0.00 | 36.36 | 3.01 |
1219 | 2987 | 7.123397 | GCTACTATCTCCATGTCTATGAATCCA | 59.877 | 40.741 | 0.00 | 0.00 | 36.36 | 3.41 |
1220 | 2988 | 7.238486 | ACTATCTCCATGTCTATGAATCCAC | 57.762 | 40.000 | 0.00 | 0.00 | 36.36 | 4.02 |
1221 | 2989 | 6.784473 | ACTATCTCCATGTCTATGAATCCACA | 59.216 | 38.462 | 0.00 | 0.00 | 36.36 | 4.17 |
1222 | 2990 | 6.699242 | ATCTCCATGTCTATGAATCCACAT | 57.301 | 37.500 | 0.00 | 0.00 | 36.36 | 3.21 |
1223 | 2991 | 5.861727 | TCTCCATGTCTATGAATCCACATG | 58.138 | 41.667 | 4.27 | 4.27 | 43.85 | 3.21 |
1224 | 2992 | 4.392047 | TCCATGTCTATGAATCCACATGC | 58.608 | 43.478 | 5.54 | 0.00 | 43.20 | 4.06 |
1235 | 3003 | 2.848678 | TCCACATGCTAGTACTCCCT | 57.151 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1236 | 3004 | 2.667470 | TCCACATGCTAGTACTCCCTC | 58.333 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
1237 | 3005 | 1.689273 | CCACATGCTAGTACTCCCTCC | 59.311 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
1238 | 3006 | 1.338337 | CACATGCTAGTACTCCCTCCG | 59.662 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
1239 | 3007 | 1.063867 | ACATGCTAGTACTCCCTCCGT | 60.064 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
1241 | 3009 | 1.760192 | TGCTAGTACTCCCTCCGTTC | 58.240 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1243 | 3011 | 1.409942 | GCTAGTACTCCCTCCGTTCCT | 60.410 | 57.143 | 0.00 | 0.00 | 0.00 | 3.36 |
1245 | 3013 | 3.686691 | GCTAGTACTCCCTCCGTTCCTAA | 60.687 | 52.174 | 0.00 | 0.00 | 0.00 | 2.69 |
1246 | 3014 | 3.463048 | AGTACTCCCTCCGTTCCTAAA | 57.537 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
1247 | 3015 | 3.991683 | AGTACTCCCTCCGTTCCTAAAT | 58.008 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
1249 | 3017 | 5.713807 | AGTACTCCCTCCGTTCCTAAATAT | 58.286 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
1250 | 3018 | 6.141790 | AGTACTCCCTCCGTTCCTAAATATT | 58.858 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
1251 | 3019 | 5.970501 | ACTCCCTCCGTTCCTAAATATTT | 57.029 | 39.130 | 5.89 | 5.89 | 0.00 | 1.40 |
1252 | 3020 | 5.681639 | ACTCCCTCCGTTCCTAAATATTTG | 58.318 | 41.667 | 11.05 | 1.40 | 0.00 | 2.32 |
1253 | 3021 | 5.191124 | ACTCCCTCCGTTCCTAAATATTTGT | 59.809 | 40.000 | 11.05 | 0.00 | 0.00 | 2.83 |
1256 | 3024 | 6.069847 | TCCCTCCGTTCCTAAATATTTGTCTT | 60.070 | 38.462 | 11.05 | 0.00 | 0.00 | 3.01 |
1258 | 3026 | 7.201705 | CCCTCCGTTCCTAAATATTTGTCTTTC | 60.202 | 40.741 | 11.05 | 0.00 | 0.00 | 2.62 |
1259 | 3027 | 7.553044 | CCTCCGTTCCTAAATATTTGTCTTTCT | 59.447 | 37.037 | 11.05 | 0.00 | 0.00 | 2.52 |
1260 | 3028 | 9.595823 | CTCCGTTCCTAAATATTTGTCTTTCTA | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.10 |
1261 | 3029 | 9.595823 | TCCGTTCCTAAATATTTGTCTTTCTAG | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.43 |
1262 | 3030 | 9.595823 | CCGTTCCTAAATATTTGTCTTTCTAGA | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.43 |
1276 | 3044 | 9.684448 | TTGTCTTTCTAGAGATATCAATAAGCG | 57.316 | 33.333 | 5.32 | 0.00 | 0.00 | 4.68 |
1277 | 3045 | 9.067986 | TGTCTTTCTAGAGATATCAATAAGCGA | 57.932 | 33.333 | 5.32 | 0.00 | 0.00 | 4.93 |
1278 | 3046 | 9.337091 | GTCTTTCTAGAGATATCAATAAGCGAC | 57.663 | 37.037 | 5.32 | 0.00 | 0.00 | 5.19 |
1279 | 3047 | 9.290988 | TCTTTCTAGAGATATCAATAAGCGACT | 57.709 | 33.333 | 5.32 | 0.00 | 0.00 | 4.18 |
1282 | 3050 | 9.503399 | TTCTAGAGATATCAATAAGCGACTACA | 57.497 | 33.333 | 5.32 | 0.00 | 0.00 | 2.74 |
1283 | 3051 | 8.937884 | TCTAGAGATATCAATAAGCGACTACAC | 58.062 | 37.037 | 5.32 | 0.00 | 0.00 | 2.90 |
1284 | 3052 | 7.511959 | AGAGATATCAATAAGCGACTACACA | 57.488 | 36.000 | 5.32 | 0.00 | 0.00 | 3.72 |
1285 | 3053 | 7.941919 | AGAGATATCAATAAGCGACTACACAA | 58.058 | 34.615 | 5.32 | 0.00 | 0.00 | 3.33 |
1286 | 3054 | 8.414003 | AGAGATATCAATAAGCGACTACACAAA | 58.586 | 33.333 | 5.32 | 0.00 | 0.00 | 2.83 |
1287 | 3055 | 8.942338 | AGATATCAATAAGCGACTACACAAAA | 57.058 | 30.769 | 5.32 | 0.00 | 0.00 | 2.44 |
1288 | 3056 | 8.818057 | AGATATCAATAAGCGACTACACAAAAC | 58.182 | 33.333 | 5.32 | 0.00 | 0.00 | 2.43 |
1289 | 3057 | 5.258685 | TCAATAAGCGACTACACAAAACG | 57.741 | 39.130 | 0.00 | 0.00 | 0.00 | 3.60 |
1290 | 3058 | 4.983538 | TCAATAAGCGACTACACAAAACGA | 59.016 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
1291 | 3059 | 5.118050 | TCAATAAGCGACTACACAAAACGAG | 59.882 | 40.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1292 | 3060 | 2.503920 | AGCGACTACACAAAACGAGT | 57.496 | 45.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1293 | 3061 | 2.124903 | AGCGACTACACAAAACGAGTG | 58.875 | 47.619 | 0.00 | 0.00 | 42.56 | 3.51 |
1294 | 3062 | 2.121786 | GCGACTACACAAAACGAGTGA | 58.878 | 47.619 | 0.00 | 0.00 | 40.16 | 3.41 |
1295 | 3063 | 2.536803 | GCGACTACACAAAACGAGTGAA | 59.463 | 45.455 | 0.00 | 0.00 | 40.16 | 3.18 |
1296 | 3064 | 3.183775 | GCGACTACACAAAACGAGTGAAT | 59.816 | 43.478 | 0.00 | 0.00 | 40.16 | 2.57 |
1297 | 3065 | 4.663389 | GCGACTACACAAAACGAGTGAATC | 60.663 | 45.833 | 0.00 | 0.00 | 40.16 | 2.52 |
1298 | 3066 | 4.680110 | CGACTACACAAAACGAGTGAATCT | 59.320 | 41.667 | 0.00 | 0.00 | 40.16 | 2.40 |
1299 | 3067 | 5.854866 | CGACTACACAAAACGAGTGAATCTA | 59.145 | 40.000 | 0.00 | 0.00 | 40.16 | 1.98 |
1300 | 3068 | 6.183359 | CGACTACACAAAACGAGTGAATCTAC | 60.183 | 42.308 | 0.00 | 0.00 | 40.16 | 2.59 |
1301 | 3069 | 6.509656 | ACTACACAAAACGAGTGAATCTACA | 58.490 | 36.000 | 0.00 | 0.00 | 40.16 | 2.74 |
1302 | 3070 | 7.152645 | ACTACACAAAACGAGTGAATCTACAT | 58.847 | 34.615 | 0.00 | 0.00 | 40.16 | 2.29 |
1303 | 3071 | 6.861065 | ACACAAAACGAGTGAATCTACATT | 57.139 | 33.333 | 0.00 | 0.00 | 40.16 | 2.71 |
1304 | 3072 | 6.888430 | ACACAAAACGAGTGAATCTACATTC | 58.112 | 36.000 | 0.00 | 0.00 | 40.16 | 2.67 |
1305 | 3073 | 6.706270 | ACACAAAACGAGTGAATCTACATTCT | 59.294 | 34.615 | 0.00 | 0.00 | 39.49 | 2.40 |
1306 | 3074 | 7.870954 | ACACAAAACGAGTGAATCTACATTCTA | 59.129 | 33.333 | 0.00 | 0.00 | 39.49 | 2.10 |
1307 | 3075 | 8.708742 | CACAAAACGAGTGAATCTACATTCTAA | 58.291 | 33.333 | 0.00 | 0.00 | 39.49 | 2.10 |
1308 | 3076 | 9.268268 | ACAAAACGAGTGAATCTACATTCTAAA | 57.732 | 29.630 | 0.00 | 0.00 | 39.49 | 1.85 |
1344 | 3112 | 6.726490 | ACATCCGTATGTAGTAGTCCATTT | 57.274 | 37.500 | 0.00 | 0.00 | 44.66 | 2.32 |
1345 | 3113 | 6.513180 | ACATCCGTATGTAGTAGTCCATTTG | 58.487 | 40.000 | 0.00 | 0.00 | 44.66 | 2.32 |
1346 | 3114 | 6.322969 | ACATCCGTATGTAGTAGTCCATTTGA | 59.677 | 38.462 | 0.00 | 0.00 | 44.66 | 2.69 |
1347 | 3115 | 6.778834 | TCCGTATGTAGTAGTCCATTTGAA | 57.221 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
1348 | 3116 | 7.172868 | TCCGTATGTAGTAGTCCATTTGAAA | 57.827 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1349 | 3117 | 7.788026 | TCCGTATGTAGTAGTCCATTTGAAAT | 58.212 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
1350 | 3118 | 8.262227 | TCCGTATGTAGTAGTCCATTTGAAATT | 58.738 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1351 | 3119 | 8.548721 | CCGTATGTAGTAGTCCATTTGAAATTC | 58.451 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
1352 | 3120 | 9.314321 | CGTATGTAGTAGTCCATTTGAAATTCT | 57.686 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
1373 | 3141 | 8.809468 | ATTCTAAAAAGACAAATACTCCCTCC | 57.191 | 34.615 | 0.00 | 0.00 | 0.00 | 4.30 |
1374 | 3142 | 6.403878 | TCTAAAAAGACAAATACTCCCTCCG | 58.596 | 40.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1375 | 3143 | 4.635699 | AAAAGACAAATACTCCCTCCGT | 57.364 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
1376 | 3144 | 3.889520 | AAGACAAATACTCCCTCCGTC | 57.110 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
1377 | 3145 | 2.108970 | AGACAAATACTCCCTCCGTCC | 58.891 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
1378 | 3146 | 1.138464 | GACAAATACTCCCTCCGTCCC | 59.862 | 57.143 | 0.00 | 0.00 | 0.00 | 4.46 |
1379 | 3147 | 1.200519 | CAAATACTCCCTCCGTCCCA | 58.799 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
1380 | 3148 | 1.557832 | CAAATACTCCCTCCGTCCCAA | 59.442 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
1381 | 3149 | 1.961133 | AATACTCCCTCCGTCCCAAA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1382 | 3150 | 1.961133 | ATACTCCCTCCGTCCCAAAA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
1383 | 3151 | 1.961133 | TACTCCCTCCGTCCCAAAAT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
1384 | 3152 | 1.073098 | ACTCCCTCCGTCCCAAAATT | 58.927 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
1385 | 3153 | 1.004394 | ACTCCCTCCGTCCCAAAATTC | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
1386 | 3154 | 1.282157 | CTCCCTCCGTCCCAAAATTCT | 59.718 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
1387 | 3155 | 1.708551 | TCCCTCCGTCCCAAAATTCTT | 59.291 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
1388 | 3156 | 1.818674 | CCCTCCGTCCCAAAATTCTTG | 59.181 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
1389 | 3157 | 2.514803 | CCTCCGTCCCAAAATTCTTGT | 58.485 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
1390 | 3158 | 2.488153 | CCTCCGTCCCAAAATTCTTGTC | 59.512 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1391 | 3159 | 3.412386 | CTCCGTCCCAAAATTCTTGTCT | 58.588 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1392 | 3160 | 3.821033 | CTCCGTCCCAAAATTCTTGTCTT | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
1393 | 3161 | 4.975631 | TCCGTCCCAAAATTCTTGTCTTA | 58.024 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
1394 | 3162 | 5.001232 | TCCGTCCCAAAATTCTTGTCTTAG | 58.999 | 41.667 | 0.00 | 0.00 | 0.00 | 2.18 |
1395 | 3163 | 5.001232 | CCGTCCCAAAATTCTTGTCTTAGA | 58.999 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
1396 | 3164 | 5.648092 | CCGTCCCAAAATTCTTGTCTTAGAT | 59.352 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
1397 | 3165 | 6.151144 | CCGTCCCAAAATTCTTGTCTTAGATT | 59.849 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
1398 | 3166 | 7.309194 | CCGTCCCAAAATTCTTGTCTTAGATTT | 60.309 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
1399 | 3167 | 7.538678 | CGTCCCAAAATTCTTGTCTTAGATTTG | 59.461 | 37.037 | 0.00 | 0.00 | 29.84 | 2.32 |
1400 | 3168 | 8.360390 | GTCCCAAAATTCTTGTCTTAGATTTGT | 58.640 | 33.333 | 0.00 | 0.00 | 28.79 | 2.83 |
1401 | 3169 | 8.576442 | TCCCAAAATTCTTGTCTTAGATTTGTC | 58.424 | 33.333 | 0.00 | 0.00 | 28.79 | 3.18 |
1402 | 3170 | 8.579863 | CCCAAAATTCTTGTCTTAGATTTGTCT | 58.420 | 33.333 | 0.00 | 0.00 | 28.79 | 3.41 |
1410 | 3178 | 9.582431 | TCTTGTCTTAGATTTGTCTAAATACGG | 57.418 | 33.333 | 0.26 | 0.99 | 36.66 | 4.02 |
1411 | 3179 | 9.582431 | CTTGTCTTAGATTTGTCTAAATACGGA | 57.418 | 33.333 | 0.26 | 0.00 | 36.66 | 4.69 |
1413 | 3181 | 9.529325 | TGTCTTAGATTTGTCTAAATACGGATG | 57.471 | 33.333 | 0.26 | 0.00 | 36.66 | 3.51 |
1414 | 3182 | 9.530633 | GTCTTAGATTTGTCTAAATACGGATGT | 57.469 | 33.333 | 0.26 | 0.00 | 36.66 | 3.06 |
1419 | 3187 | 8.647796 | AGATTTGTCTAAATACGGATGTATCCA | 58.352 | 33.333 | 11.23 | 0.00 | 40.42 | 3.41 |
1420 | 3188 | 8.833231 | ATTTGTCTAAATACGGATGTATCCAG | 57.167 | 34.615 | 11.23 | 6.49 | 40.42 | 3.86 |
1421 | 3189 | 8.429641 | ATTTGTCTAAATACGGATGTATCCAGT | 58.570 | 33.333 | 11.23 | 11.23 | 40.42 | 4.00 |
1434 | 3202 | 8.958119 | GGATGTATCCAGTTACATTTTAGTGA | 57.042 | 34.615 | 6.03 | 0.00 | 46.38 | 3.41 |
1435 | 3203 | 8.827677 | GGATGTATCCAGTTACATTTTAGTGAC | 58.172 | 37.037 | 6.03 | 0.00 | 46.38 | 3.67 |
1436 | 3204 | 7.821595 | TGTATCCAGTTACATTTTAGTGACG | 57.178 | 36.000 | 0.00 | 0.00 | 33.67 | 4.35 |
1437 | 3205 | 6.814644 | TGTATCCAGTTACATTTTAGTGACGG | 59.185 | 38.462 | 0.00 | 0.00 | 33.67 | 4.79 |
1438 | 3206 | 5.471556 | TCCAGTTACATTTTAGTGACGGA | 57.528 | 39.130 | 0.00 | 0.00 | 33.67 | 4.69 |
1439 | 3207 | 5.475719 | TCCAGTTACATTTTAGTGACGGAG | 58.524 | 41.667 | 0.00 | 0.00 | 33.67 | 4.63 |
1440 | 3208 | 4.630069 | CCAGTTACATTTTAGTGACGGAGG | 59.370 | 45.833 | 0.00 | 0.00 | 33.67 | 4.30 |
1441 | 3209 | 4.630069 | CAGTTACATTTTAGTGACGGAGGG | 59.370 | 45.833 | 0.00 | 0.00 | 33.67 | 4.30 |
1442 | 3210 | 4.529377 | AGTTACATTTTAGTGACGGAGGGA | 59.471 | 41.667 | 0.00 | 0.00 | 33.67 | 4.20 |
1443 | 3211 | 3.611766 | ACATTTTAGTGACGGAGGGAG | 57.388 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
1444 | 3212 | 2.904434 | ACATTTTAGTGACGGAGGGAGT | 59.096 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
1445 | 3213 | 4.091549 | ACATTTTAGTGACGGAGGGAGTA | 58.908 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
1446 | 3214 | 4.715297 | ACATTTTAGTGACGGAGGGAGTAT | 59.285 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
1447 | 3215 | 5.189145 | ACATTTTAGTGACGGAGGGAGTATT | 59.811 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
1448 | 3216 | 5.750352 | TTTTAGTGACGGAGGGAGTATTT | 57.250 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
1449 | 3217 | 6.855763 | TTTTAGTGACGGAGGGAGTATTTA | 57.144 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
1450 | 3218 | 6.461110 | TTTAGTGACGGAGGGAGTATTTAG | 57.539 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
1451 | 3219 | 4.246712 | AGTGACGGAGGGAGTATTTAGA | 57.753 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
1452 | 3220 | 4.607239 | AGTGACGGAGGGAGTATTTAGAA | 58.393 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
1453 | 3221 | 5.021458 | AGTGACGGAGGGAGTATTTAGAAA | 58.979 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
1454 | 3222 | 5.105432 | AGTGACGGAGGGAGTATTTAGAAAC | 60.105 | 44.000 | 0.00 | 0.00 | 0.00 | 2.78 |
1455 | 3223 | 4.142315 | TGACGGAGGGAGTATTTAGAAACG | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.60 |
1456 | 3224 | 3.131755 | ACGGAGGGAGTATTTAGAAACGG | 59.868 | 47.826 | 0.00 | 0.00 | 0.00 | 4.44 |
1457 | 3225 | 3.382546 | CGGAGGGAGTATTTAGAAACGGA | 59.617 | 47.826 | 0.00 | 0.00 | 0.00 | 4.69 |
1458 | 3226 | 4.038883 | CGGAGGGAGTATTTAGAAACGGAT | 59.961 | 45.833 | 0.00 | 0.00 | 0.00 | 4.18 |
1459 | 3227 | 5.298347 | GGAGGGAGTATTTAGAAACGGATG | 58.702 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
1460 | 3228 | 5.291905 | AGGGAGTATTTAGAAACGGATGG | 57.708 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
1461 | 3229 | 4.966805 | AGGGAGTATTTAGAAACGGATGGA | 59.033 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
1462 | 3230 | 5.070580 | AGGGAGTATTTAGAAACGGATGGAG | 59.929 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1463 | 3231 | 5.163332 | GGGAGTATTTAGAAACGGATGGAGT | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1464 | 3232 | 6.041296 | GGGAGTATTTAGAAACGGATGGAGTA | 59.959 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
1465 | 3233 | 7.256225 | GGGAGTATTTAGAAACGGATGGAGTAT | 60.256 | 40.741 | 0.00 | 0.00 | 0.00 | 2.12 |
1466 | 3234 | 8.800332 | GGAGTATTTAGAAACGGATGGAGTATA | 58.200 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
1498 | 3267 | 1.842052 | TGTCCATGAATGCACATGCT | 58.158 | 45.000 | 10.95 | 0.00 | 44.11 | 3.79 |
1500 | 3269 | 2.946990 | TGTCCATGAATGCACATGCTAG | 59.053 | 45.455 | 10.95 | 0.20 | 44.11 | 3.42 |
1501 | 3270 | 2.947652 | GTCCATGAATGCACATGCTAGT | 59.052 | 45.455 | 10.95 | 0.00 | 44.11 | 2.57 |
1502 | 3271 | 4.129380 | GTCCATGAATGCACATGCTAGTA | 58.871 | 43.478 | 10.95 | 0.00 | 44.11 | 1.82 |
1503 | 3272 | 4.758674 | GTCCATGAATGCACATGCTAGTAT | 59.241 | 41.667 | 10.95 | 0.00 | 44.11 | 2.12 |
1504 | 3273 | 5.240183 | GTCCATGAATGCACATGCTAGTATT | 59.760 | 40.000 | 10.95 | 0.00 | 44.11 | 1.89 |
1506 | 3275 | 6.997476 | TCCATGAATGCACATGCTAGTATTTA | 59.003 | 34.615 | 10.95 | 0.00 | 44.11 | 1.40 |
1507 | 3276 | 7.666804 | TCCATGAATGCACATGCTAGTATTTAT | 59.333 | 33.333 | 10.95 | 0.00 | 44.11 | 1.40 |
1508 | 3277 | 7.966753 | CCATGAATGCACATGCTAGTATTTATC | 59.033 | 37.037 | 10.95 | 0.00 | 44.11 | 1.75 |
1509 | 3278 | 8.727910 | CATGAATGCACATGCTAGTATTTATCT | 58.272 | 33.333 | 5.31 | 0.00 | 40.54 | 1.98 |
1511 | 3280 | 7.388776 | TGAATGCACATGCTAGTATTTATCTCC | 59.611 | 37.037 | 5.31 | 0.00 | 42.66 | 3.71 |
1512 | 3281 | 6.173427 | TGCACATGCTAGTATTTATCTCCA | 57.827 | 37.500 | 5.31 | 0.00 | 42.66 | 3.86 |
1514 | 3283 | 6.652062 | TGCACATGCTAGTATTTATCTCCATG | 59.348 | 38.462 | 5.31 | 0.00 | 42.66 | 3.66 |
1515 | 3284 | 6.402983 | GCACATGCTAGTATTTATCTCCATGC | 60.403 | 42.308 | 0.00 | 0.00 | 38.21 | 4.06 |
1516 | 3285 | 6.093219 | CACATGCTAGTATTTATCTCCATGCC | 59.907 | 42.308 | 0.00 | 0.00 | 32.82 | 4.40 |
1517 | 3286 | 5.165961 | TGCTAGTATTTATCTCCATGCCC | 57.834 | 43.478 | 0.00 | 0.00 | 0.00 | 5.36 |
1518 | 3287 | 4.597075 | TGCTAGTATTTATCTCCATGCCCA | 59.403 | 41.667 | 0.00 | 0.00 | 0.00 | 5.36 |
1519 | 3288 | 5.251468 | TGCTAGTATTTATCTCCATGCCCAT | 59.749 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1520 | 3289 | 5.587844 | GCTAGTATTTATCTCCATGCCCATG | 59.412 | 44.000 | 1.28 | 1.28 | 38.51 | 3.66 |
1521 | 3290 | 5.848286 | AGTATTTATCTCCATGCCCATGA | 57.152 | 39.130 | 9.73 | 0.00 | 41.20 | 3.07 |
1522 | 3291 | 6.204852 | AGTATTTATCTCCATGCCCATGAA | 57.795 | 37.500 | 9.73 | 0.00 | 41.20 | 2.57 |
1523 | 3292 | 6.797707 | AGTATTTATCTCCATGCCCATGAAT | 58.202 | 36.000 | 9.73 | 3.54 | 41.20 | 2.57 |
1524 | 3293 | 6.888632 | AGTATTTATCTCCATGCCCATGAATC | 59.111 | 38.462 | 9.73 | 0.00 | 41.20 | 2.52 |
1525 | 3294 | 2.599408 | ATCTCCATGCCCATGAATCC | 57.401 | 50.000 | 9.73 | 0.00 | 41.20 | 3.01 |
1526 | 3295 | 1.224436 | TCTCCATGCCCATGAATCCA | 58.776 | 50.000 | 9.73 | 0.00 | 41.20 | 3.41 |
1527 | 3296 | 1.133699 | TCTCCATGCCCATGAATCCAC | 60.134 | 52.381 | 9.73 | 0.00 | 41.20 | 4.02 |
1528 | 3297 | 0.630134 | TCCATGCCCATGAATCCACA | 59.370 | 50.000 | 9.73 | 0.00 | 41.20 | 4.17 |
1529 | 3298 | 1.006878 | TCCATGCCCATGAATCCACAA | 59.993 | 47.619 | 9.73 | 0.00 | 41.20 | 3.33 |
1530 | 3299 | 1.137479 | CCATGCCCATGAATCCACAAC | 59.863 | 52.381 | 9.73 | 0.00 | 41.20 | 3.32 |
1531 | 3300 | 1.826096 | CATGCCCATGAATCCACAACA | 59.174 | 47.619 | 2.09 | 0.00 | 41.20 | 3.33 |
1532 | 3301 | 2.234896 | TGCCCATGAATCCACAACAT | 57.765 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1533 | 3302 | 1.826096 | TGCCCATGAATCCACAACATG | 59.174 | 47.619 | 0.00 | 0.00 | 40.39 | 3.21 |
1534 | 3303 | 1.472026 | GCCCATGAATCCACAACATGC | 60.472 | 52.381 | 0.00 | 0.00 | 39.68 | 4.06 |
1535 | 3304 | 1.137479 | CCCATGAATCCACAACATGCC | 59.863 | 52.381 | 0.00 | 0.00 | 39.68 | 4.40 |
1536 | 3305 | 1.826096 | CCATGAATCCACAACATGCCA | 59.174 | 47.619 | 0.00 | 0.00 | 39.68 | 4.92 |
1537 | 3306 | 2.432874 | CCATGAATCCACAACATGCCAT | 59.567 | 45.455 | 0.00 | 0.00 | 39.68 | 4.40 |
1538 | 3307 | 3.118555 | CCATGAATCCACAACATGCCATT | 60.119 | 43.478 | 0.00 | 0.00 | 39.68 | 3.16 |
1539 | 3308 | 3.872511 | TGAATCCACAACATGCCATTC | 57.127 | 42.857 | 0.00 | 0.00 | 31.27 | 2.67 |
1540 | 3309 | 3.163467 | TGAATCCACAACATGCCATTCA | 58.837 | 40.909 | 0.00 | 0.00 | 35.35 | 2.57 |
1541 | 3310 | 3.056678 | TGAATCCACAACATGCCATTCAC | 60.057 | 43.478 | 0.00 | 0.00 | 33.93 | 3.18 |
1542 | 3311 | 2.291209 | TCCACAACATGCCATTCACT | 57.709 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1543 | 3312 | 1.887854 | TCCACAACATGCCATTCACTG | 59.112 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
1544 | 3313 | 1.887854 | CCACAACATGCCATTCACTGA | 59.112 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1545 | 3314 | 2.352030 | CCACAACATGCCATTCACTGAC | 60.352 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1546 | 3315 | 2.555325 | CACAACATGCCATTCACTGACT | 59.445 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1547 | 3316 | 2.816087 | ACAACATGCCATTCACTGACTC | 59.184 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
1548 | 3317 | 1.730501 | ACATGCCATTCACTGACTCG | 58.269 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1572 | 3341 | 1.403679 | CCTTTTCAGGTGTTCACGCAA | 59.596 | 47.619 | 0.00 | 0.00 | 35.06 | 4.85 |
1577 | 3346 | 0.317269 | CAGGTGTTCACGCAAGCAAG | 60.317 | 55.000 | 0.00 | 0.00 | 45.62 | 4.01 |
1589 | 3358 | 0.248498 | CAAGCAAGGCAGATGCATCG | 60.248 | 55.000 | 20.67 | 16.00 | 46.22 | 3.84 |
1590 | 3359 | 0.393402 | AAGCAAGGCAGATGCATCGA | 60.393 | 50.000 | 20.67 | 0.00 | 46.22 | 3.59 |
1591 | 3360 | 1.094073 | AGCAAGGCAGATGCATCGAC | 61.094 | 55.000 | 20.67 | 17.10 | 46.22 | 4.20 |
1592 | 3361 | 1.371337 | GCAAGGCAGATGCATCGACA | 61.371 | 55.000 | 20.67 | 0.00 | 43.29 | 4.35 |
1593 | 3362 | 1.306148 | CAAGGCAGATGCATCGACAT | 58.694 | 50.000 | 20.67 | 11.78 | 44.36 | 3.06 |
1594 | 3363 | 1.263484 | CAAGGCAGATGCATCGACATC | 59.737 | 52.381 | 20.67 | 7.72 | 45.62 | 3.06 |
1629 | 3398 | 1.583967 | GATCTCGTCGTCAGCACGG | 60.584 | 63.158 | 0.00 | 0.00 | 46.70 | 4.94 |
1690 | 3459 | 1.264020 | GAGCGTGATCAACACTTGCAA | 59.736 | 47.619 | 0.00 | 0.00 | 46.24 | 4.08 |
1691 | 3460 | 1.265095 | AGCGTGATCAACACTTGCAAG | 59.735 | 47.619 | 24.84 | 24.84 | 46.24 | 4.01 |
1718 | 3487 | 2.156917 | CAGAAGAACATCAAGCTGGCA | 58.843 | 47.619 | 0.00 | 0.00 | 0.00 | 4.92 |
1734 | 3503 | 3.451894 | CATGCCCGGGCTTCAACC | 61.452 | 66.667 | 43.34 | 16.20 | 42.51 | 3.77 |
1750 | 3519 | 2.567169 | TCAACCACTCCATCGATGTCTT | 59.433 | 45.455 | 23.27 | 4.46 | 0.00 | 3.01 |
1872 | 3641 | 1.227943 | AGCGCAACCTTCAGCTTCA | 60.228 | 52.632 | 11.47 | 0.00 | 36.41 | 3.02 |
1959 | 3786 | 7.307219 | GGTCTTATGATTGTACCGTAAATCTGC | 60.307 | 40.741 | 5.54 | 0.00 | 34.52 | 4.26 |
1982 | 3809 | 6.148264 | GCTTCCTTTGAGACAAGAAAATCTG | 58.852 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2010 | 3837 | 2.094675 | TCTGGCAATAAGAGCTTTGGC | 58.905 | 47.619 | 13.84 | 13.84 | 45.62 | 4.52 |
2023 | 3850 | 1.925946 | GCTTTGGCGTGTAACTGCAAG | 60.926 | 52.381 | 0.00 | 0.00 | 37.93 | 4.01 |
2103 | 3935 | 4.291540 | TGCAGCTTATAATTTTCAGCGG | 57.708 | 40.909 | 0.00 | 0.00 | 37.35 | 5.52 |
2302 | 4134 | 6.849151 | ACAGAAATTGGGTACTCTTAAGGTT | 58.151 | 36.000 | 1.85 | 0.00 | 0.00 | 3.50 |
2329 | 4161 | 5.755409 | TTTAATGGTGCCTCTAACTCTCA | 57.245 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
2473 | 4307 | 2.990967 | CAAACATGGCGGCCACCT | 60.991 | 61.111 | 26.48 | 6.57 | 35.80 | 4.00 |
2801 | 4645 | 0.398696 | ACGACATACTGCCCCAACAA | 59.601 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2817 | 4661 | 4.323417 | CCAACAACACCATACTTAGCTCA | 58.677 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
2948 | 4843 | 2.169832 | TGCACTAACTTCAGCCAGAC | 57.830 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2972 | 4867 | 4.037690 | GCTCGTGATGAAACCATTTATGC | 58.962 | 43.478 | 0.00 | 0.00 | 0.00 | 3.14 |
2982 | 4877 | 0.746063 | CCATTTATGCCATGCGGTGT | 59.254 | 50.000 | 0.00 | 0.00 | 33.28 | 4.16 |
3012 | 4913 | 6.655003 | TCTTCATAAATCGCTTTTCTCCTTGT | 59.345 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
3013 | 4914 | 6.422776 | TCATAAATCGCTTTTCTCCTTGTC | 57.577 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
3014 | 4915 | 6.173339 | TCATAAATCGCTTTTCTCCTTGTCT | 58.827 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3015 | 4916 | 7.327975 | TCATAAATCGCTTTTCTCCTTGTCTA | 58.672 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 1.144057 | CGATCTTCTCCCCCAACGG | 59.856 | 63.158 | 0.00 | 0.00 | 0.00 | 4.44 |
83 | 86 | 4.680237 | CAGGCGTCGGTGCAAGGA | 62.680 | 66.667 | 0.00 | 0.00 | 36.28 | 3.36 |
535 | 539 | 4.082523 | CCTCCTCGCCGCTTTCCA | 62.083 | 66.667 | 0.00 | 0.00 | 0.00 | 3.53 |
591 | 631 | 1.860078 | GCGCGCGCCTATAAAATCT | 59.140 | 52.632 | 42.83 | 0.00 | 34.56 | 2.40 |
674 | 714 | 2.897207 | CGGGAGATTACCGCACCA | 59.103 | 61.111 | 0.00 | 0.00 | 45.34 | 4.17 |
760 | 805 | 4.388499 | ATCTCCAACCGGCGCGTT | 62.388 | 61.111 | 8.43 | 4.46 | 0.00 | 4.84 |
854 | 910 | 6.931838 | TGTTGTACGGAAAGAGATTGATACT | 58.068 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
954 | 1016 | 6.128526 | GGCTATTTATAGGACAACGAATCAGC | 60.129 | 42.308 | 0.00 | 0.00 | 0.00 | 4.26 |
958 | 1020 | 7.680730 | AGATGGCTATTTATAGGACAACGAAT | 58.319 | 34.615 | 0.00 | 0.00 | 0.00 | 3.34 |
1032 | 2799 | 1.764723 | CATGCCTGGACTGGATGTCTA | 59.235 | 52.381 | 0.00 | 0.00 | 44.74 | 2.59 |
1033 | 2800 | 0.545171 | CATGCCTGGACTGGATGTCT | 59.455 | 55.000 | 0.00 | 0.00 | 44.74 | 3.41 |
1034 | 2801 | 1.099879 | GCATGCCTGGACTGGATGTC | 61.100 | 60.000 | 6.36 | 0.00 | 44.63 | 3.06 |
1035 | 2802 | 1.077212 | GCATGCCTGGACTGGATGT | 60.077 | 57.895 | 6.36 | 0.00 | 0.00 | 3.06 |
1036 | 2803 | 0.471191 | TAGCATGCCTGGACTGGATG | 59.529 | 55.000 | 15.66 | 2.41 | 0.00 | 3.51 |
1037 | 2804 | 1.216064 | TTAGCATGCCTGGACTGGAT | 58.784 | 50.000 | 15.66 | 0.00 | 0.00 | 3.41 |
1038 | 2805 | 0.991146 | TTTAGCATGCCTGGACTGGA | 59.009 | 50.000 | 15.66 | 0.00 | 0.00 | 3.86 |
1039 | 2806 | 1.098050 | GTTTAGCATGCCTGGACTGG | 58.902 | 55.000 | 15.66 | 0.00 | 0.00 | 4.00 |
1040 | 2807 | 1.741706 | CTGTTTAGCATGCCTGGACTG | 59.258 | 52.381 | 15.66 | 8.59 | 0.00 | 3.51 |
1041 | 2808 | 2.119801 | CTGTTTAGCATGCCTGGACT | 57.880 | 50.000 | 15.66 | 0.00 | 0.00 | 3.85 |
1053 | 2820 | 2.045708 | TGCCCATGCCGCTGTTTAG | 61.046 | 57.895 | 4.84 | 0.00 | 36.33 | 1.85 |
1069 | 2836 | 2.627945 | TGATCACTATCGGTTTGGTGC | 58.372 | 47.619 | 0.00 | 0.00 | 34.60 | 5.01 |
1071 | 2838 | 4.635765 | CACAATGATCACTATCGGTTTGGT | 59.364 | 41.667 | 0.00 | 0.00 | 34.60 | 3.67 |
1078 | 2845 | 3.364664 | GCATGCCACAATGATCACTATCG | 60.365 | 47.826 | 6.36 | 0.00 | 34.60 | 2.92 |
1079 | 2846 | 3.364664 | CGCATGCCACAATGATCACTATC | 60.365 | 47.826 | 13.15 | 0.00 | 0.00 | 2.08 |
1089 | 2856 | 1.533625 | AGTAACACGCATGCCACAAT | 58.466 | 45.000 | 13.15 | 0.00 | 0.00 | 2.71 |
1097 | 2865 | 3.504134 | TGGTAATGCAAAGTAACACGCAT | 59.496 | 39.130 | 0.00 | 0.00 | 46.66 | 4.73 |
1101 | 2869 | 6.067263 | TCTGTTGGTAATGCAAAGTAACAC | 57.933 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
1106 | 2874 | 3.832527 | ACCTCTGTTGGTAATGCAAAGT | 58.167 | 40.909 | 0.00 | 0.00 | 38.79 | 2.66 |
1107 | 2875 | 5.163622 | CCATACCTCTGTTGGTAATGCAAAG | 60.164 | 44.000 | 0.00 | 0.00 | 44.65 | 2.77 |
1130 | 2898 | 6.434340 | ACTTCTTGGAGATTGTTTGGAATACC | 59.566 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
1153 | 2921 | 2.099921 | CTGACAATCTGCGGCTACTACT | 59.900 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1154 | 2922 | 2.099263 | TCTGACAATCTGCGGCTACTAC | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
1155 | 2923 | 2.375146 | TCTGACAATCTGCGGCTACTA | 58.625 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
1156 | 2924 | 1.186200 | TCTGACAATCTGCGGCTACT | 58.814 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1157 | 2925 | 2.231215 | ATCTGACAATCTGCGGCTAC | 57.769 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
1158 | 2926 | 2.168313 | TCAATCTGACAATCTGCGGCTA | 59.832 | 45.455 | 0.00 | 0.00 | 0.00 | 3.93 |
1159 | 2927 | 1.065926 | TCAATCTGACAATCTGCGGCT | 60.066 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
1160 | 2928 | 1.063174 | GTCAATCTGACAATCTGCGGC | 59.937 | 52.381 | 1.92 | 0.00 | 46.22 | 6.53 |
1170 | 2938 | 7.710907 | TAGCAGTAATATGGTTGTCAATCTGAC | 59.289 | 37.037 | 0.00 | 0.00 | 38.65 | 3.51 |
1171 | 2939 | 6.653020 | AGCAGTAATATGGTTGTCAATCTGA | 58.347 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1172 | 2940 | 6.932356 | AGCAGTAATATGGTTGTCAATCTG | 57.068 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
1173 | 2941 | 7.796054 | AGTAGCAGTAATATGGTTGTCAATCT | 58.204 | 34.615 | 0.00 | 0.00 | 32.19 | 2.40 |
1174 | 2942 | 9.712305 | ATAGTAGCAGTAATATGGTTGTCAATC | 57.288 | 33.333 | 0.00 | 0.00 | 32.19 | 2.67 |
1175 | 2943 | 9.712305 | GATAGTAGCAGTAATATGGTTGTCAAT | 57.288 | 33.333 | 0.00 | 0.00 | 32.19 | 2.57 |
1176 | 2944 | 8.924303 | AGATAGTAGCAGTAATATGGTTGTCAA | 58.076 | 33.333 | 0.00 | 0.00 | 32.19 | 3.18 |
1177 | 2945 | 8.478775 | AGATAGTAGCAGTAATATGGTTGTCA | 57.521 | 34.615 | 0.00 | 0.00 | 32.19 | 3.58 |
1178 | 2946 | 8.030106 | GGAGATAGTAGCAGTAATATGGTTGTC | 58.970 | 40.741 | 0.00 | 0.00 | 32.19 | 3.18 |
1179 | 2947 | 7.509318 | TGGAGATAGTAGCAGTAATATGGTTGT | 59.491 | 37.037 | 0.00 | 0.00 | 32.19 | 3.32 |
1180 | 2948 | 7.896811 | TGGAGATAGTAGCAGTAATATGGTTG | 58.103 | 38.462 | 0.00 | 0.00 | 32.19 | 3.77 |
1181 | 2949 | 8.535335 | CATGGAGATAGTAGCAGTAATATGGTT | 58.465 | 37.037 | 0.00 | 0.00 | 32.19 | 3.67 |
1182 | 2950 | 7.676043 | ACATGGAGATAGTAGCAGTAATATGGT | 59.324 | 37.037 | 0.00 | 0.00 | 34.71 | 3.55 |
1183 | 2951 | 8.072321 | ACATGGAGATAGTAGCAGTAATATGG | 57.928 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
1184 | 2952 | 8.965819 | AGACATGGAGATAGTAGCAGTAATATG | 58.034 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
1187 | 2955 | 8.965819 | CATAGACATGGAGATAGTAGCAGTAAT | 58.034 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
1188 | 2956 | 8.164070 | TCATAGACATGGAGATAGTAGCAGTAA | 58.836 | 37.037 | 0.00 | 0.00 | 32.61 | 2.24 |
1189 | 2957 | 7.690256 | TCATAGACATGGAGATAGTAGCAGTA | 58.310 | 38.462 | 0.00 | 0.00 | 32.61 | 2.74 |
1190 | 2958 | 6.547402 | TCATAGACATGGAGATAGTAGCAGT | 58.453 | 40.000 | 0.00 | 0.00 | 32.61 | 4.40 |
1191 | 2959 | 7.459795 | TTCATAGACATGGAGATAGTAGCAG | 57.540 | 40.000 | 0.00 | 0.00 | 32.61 | 4.24 |
1192 | 2960 | 7.123397 | GGATTCATAGACATGGAGATAGTAGCA | 59.877 | 40.741 | 0.00 | 0.00 | 32.61 | 3.49 |
1193 | 2961 | 7.123397 | TGGATTCATAGACATGGAGATAGTAGC | 59.877 | 40.741 | 0.00 | 0.00 | 32.61 | 3.58 |
1194 | 2962 | 8.465999 | GTGGATTCATAGACATGGAGATAGTAG | 58.534 | 40.741 | 0.00 | 0.00 | 32.61 | 2.57 |
1195 | 2963 | 7.950124 | TGTGGATTCATAGACATGGAGATAGTA | 59.050 | 37.037 | 0.00 | 0.00 | 32.61 | 1.82 |
1196 | 2964 | 6.784473 | TGTGGATTCATAGACATGGAGATAGT | 59.216 | 38.462 | 0.00 | 0.00 | 32.61 | 2.12 |
1197 | 2965 | 7.237209 | TGTGGATTCATAGACATGGAGATAG | 57.763 | 40.000 | 0.00 | 0.00 | 32.61 | 2.08 |
1198 | 2966 | 7.618137 | CATGTGGATTCATAGACATGGAGATA | 58.382 | 38.462 | 0.00 | 0.00 | 41.25 | 1.98 |
1199 | 2967 | 6.473758 | CATGTGGATTCATAGACATGGAGAT | 58.526 | 40.000 | 0.00 | 0.00 | 41.25 | 2.75 |
1200 | 2968 | 5.744007 | GCATGTGGATTCATAGACATGGAGA | 60.744 | 44.000 | 11.73 | 0.00 | 43.86 | 3.71 |
1201 | 2969 | 4.454847 | GCATGTGGATTCATAGACATGGAG | 59.545 | 45.833 | 11.73 | 0.00 | 43.86 | 3.86 |
1202 | 2970 | 4.103627 | AGCATGTGGATTCATAGACATGGA | 59.896 | 41.667 | 11.73 | 0.00 | 43.86 | 3.41 |
1203 | 2971 | 4.395625 | AGCATGTGGATTCATAGACATGG | 58.604 | 43.478 | 11.73 | 0.00 | 43.86 | 3.66 |
1204 | 2972 | 6.228995 | ACTAGCATGTGGATTCATAGACATG | 58.771 | 40.000 | 0.00 | 0.00 | 45.60 | 3.21 |
1205 | 2973 | 6.430962 | ACTAGCATGTGGATTCATAGACAT | 57.569 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
1206 | 2974 | 5.876651 | ACTAGCATGTGGATTCATAGACA | 57.123 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
1207 | 2975 | 6.987386 | AGTACTAGCATGTGGATTCATAGAC | 58.013 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1208 | 2976 | 6.209589 | GGAGTACTAGCATGTGGATTCATAGA | 59.790 | 42.308 | 0.00 | 0.00 | 0.00 | 1.98 |
1209 | 2977 | 6.393990 | GGAGTACTAGCATGTGGATTCATAG | 58.606 | 44.000 | 0.00 | 0.00 | 0.00 | 2.23 |
1210 | 2978 | 5.246203 | GGGAGTACTAGCATGTGGATTCATA | 59.754 | 44.000 | 0.00 | 0.00 | 0.00 | 2.15 |
1211 | 2979 | 4.040952 | GGGAGTACTAGCATGTGGATTCAT | 59.959 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
1212 | 2980 | 3.388024 | GGGAGTACTAGCATGTGGATTCA | 59.612 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
1213 | 2981 | 3.643792 | AGGGAGTACTAGCATGTGGATTC | 59.356 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
1214 | 2982 | 3.643792 | GAGGGAGTACTAGCATGTGGATT | 59.356 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
1215 | 2983 | 3.235200 | GAGGGAGTACTAGCATGTGGAT | 58.765 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1216 | 2984 | 2.667470 | GAGGGAGTACTAGCATGTGGA | 58.333 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
1217 | 2985 | 1.689273 | GGAGGGAGTACTAGCATGTGG | 59.311 | 57.143 | 0.00 | 0.00 | 0.00 | 4.17 |
1218 | 2986 | 1.338337 | CGGAGGGAGTACTAGCATGTG | 59.662 | 57.143 | 0.00 | 0.00 | 0.00 | 3.21 |
1219 | 2987 | 1.063867 | ACGGAGGGAGTACTAGCATGT | 60.064 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
1220 | 2988 | 1.693627 | ACGGAGGGAGTACTAGCATG | 58.306 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 |
1221 | 2989 | 2.308690 | GAACGGAGGGAGTACTAGCAT | 58.691 | 52.381 | 0.00 | 0.00 | 0.00 | 3.79 |
1222 | 2990 | 1.684248 | GGAACGGAGGGAGTACTAGCA | 60.684 | 57.143 | 0.00 | 0.00 | 0.00 | 3.49 |
1223 | 2991 | 1.031235 | GGAACGGAGGGAGTACTAGC | 58.969 | 60.000 | 0.00 | 0.00 | 0.00 | 3.42 |
1224 | 2992 | 2.732844 | AGGAACGGAGGGAGTACTAG | 57.267 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1235 | 3003 | 9.595823 | CTAGAAAGACAAATATTTAGGAACGGA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
1236 | 3004 | 9.595823 | TCTAGAAAGACAAATATTTAGGAACGG | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.44 |
1250 | 3018 | 9.684448 | CGCTTATTGATATCTCTAGAAAGACAA | 57.316 | 33.333 | 3.98 | 0.00 | 0.00 | 3.18 |
1251 | 3019 | 9.067986 | TCGCTTATTGATATCTCTAGAAAGACA | 57.932 | 33.333 | 3.98 | 0.00 | 0.00 | 3.41 |
1252 | 3020 | 9.337091 | GTCGCTTATTGATATCTCTAGAAAGAC | 57.663 | 37.037 | 3.98 | 2.20 | 0.00 | 3.01 |
1253 | 3021 | 9.290988 | AGTCGCTTATTGATATCTCTAGAAAGA | 57.709 | 33.333 | 3.98 | 0.00 | 0.00 | 2.52 |
1256 | 3024 | 9.503399 | TGTAGTCGCTTATTGATATCTCTAGAA | 57.497 | 33.333 | 3.98 | 0.00 | 0.00 | 2.10 |
1258 | 3026 | 8.722394 | TGTGTAGTCGCTTATTGATATCTCTAG | 58.278 | 37.037 | 3.98 | 0.00 | 0.00 | 2.43 |
1259 | 3027 | 8.617290 | TGTGTAGTCGCTTATTGATATCTCTA | 57.383 | 34.615 | 3.98 | 0.00 | 0.00 | 2.43 |
1260 | 3028 | 7.511959 | TGTGTAGTCGCTTATTGATATCTCT | 57.488 | 36.000 | 3.98 | 0.00 | 0.00 | 3.10 |
1261 | 3029 | 8.575565 | TTTGTGTAGTCGCTTATTGATATCTC | 57.424 | 34.615 | 3.98 | 0.00 | 0.00 | 2.75 |
1262 | 3030 | 8.818057 | GTTTTGTGTAGTCGCTTATTGATATCT | 58.182 | 33.333 | 3.98 | 0.00 | 0.00 | 1.98 |
1263 | 3031 | 7.787935 | CGTTTTGTGTAGTCGCTTATTGATATC | 59.212 | 37.037 | 0.00 | 0.00 | 0.00 | 1.63 |
1264 | 3032 | 7.490079 | TCGTTTTGTGTAGTCGCTTATTGATAT | 59.510 | 33.333 | 0.00 | 0.00 | 0.00 | 1.63 |
1265 | 3033 | 6.807720 | TCGTTTTGTGTAGTCGCTTATTGATA | 59.192 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
1266 | 3034 | 5.636121 | TCGTTTTGTGTAGTCGCTTATTGAT | 59.364 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1267 | 3035 | 4.983538 | TCGTTTTGTGTAGTCGCTTATTGA | 59.016 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
1268 | 3036 | 5.107607 | ACTCGTTTTGTGTAGTCGCTTATTG | 60.108 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
1269 | 3037 | 4.986659 | ACTCGTTTTGTGTAGTCGCTTATT | 59.013 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
1270 | 3038 | 4.384846 | CACTCGTTTTGTGTAGTCGCTTAT | 59.615 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
1271 | 3039 | 3.732219 | CACTCGTTTTGTGTAGTCGCTTA | 59.268 | 43.478 | 0.00 | 0.00 | 0.00 | 3.09 |
1272 | 3040 | 2.538449 | CACTCGTTTTGTGTAGTCGCTT | 59.462 | 45.455 | 0.00 | 0.00 | 0.00 | 4.68 |
1273 | 3041 | 2.124903 | CACTCGTTTTGTGTAGTCGCT | 58.875 | 47.619 | 0.00 | 0.00 | 0.00 | 4.93 |
1274 | 3042 | 2.121786 | TCACTCGTTTTGTGTAGTCGC | 58.878 | 47.619 | 0.00 | 0.00 | 36.83 | 5.19 |
1275 | 3043 | 4.680110 | AGATTCACTCGTTTTGTGTAGTCG | 59.320 | 41.667 | 0.00 | 0.00 | 36.83 | 4.18 |
1276 | 3044 | 6.639686 | TGTAGATTCACTCGTTTTGTGTAGTC | 59.360 | 38.462 | 0.00 | 0.00 | 36.83 | 2.59 |
1277 | 3045 | 6.509656 | TGTAGATTCACTCGTTTTGTGTAGT | 58.490 | 36.000 | 0.00 | 0.00 | 36.83 | 2.73 |
1278 | 3046 | 7.582435 | ATGTAGATTCACTCGTTTTGTGTAG | 57.418 | 36.000 | 0.00 | 0.00 | 36.83 | 2.74 |
1279 | 3047 | 7.870954 | AGAATGTAGATTCACTCGTTTTGTGTA | 59.129 | 33.333 | 14.46 | 0.00 | 40.59 | 2.90 |
1280 | 3048 | 6.706270 | AGAATGTAGATTCACTCGTTTTGTGT | 59.294 | 34.615 | 14.46 | 0.00 | 40.59 | 3.72 |
1281 | 3049 | 7.121974 | AGAATGTAGATTCACTCGTTTTGTG | 57.878 | 36.000 | 14.46 | 0.00 | 40.59 | 3.33 |
1282 | 3050 | 8.827177 | TTAGAATGTAGATTCACTCGTTTTGT | 57.173 | 30.769 | 14.46 | 0.00 | 40.59 | 2.83 |
1315 | 3083 | 9.828039 | TGGACTACTACATACGGATGTATATAG | 57.172 | 37.037 | 24.59 | 24.59 | 45.42 | 1.31 |
1317 | 3085 | 9.696572 | AATGGACTACTACATACGGATGTATAT | 57.303 | 33.333 | 20.64 | 14.14 | 45.42 | 0.86 |
1318 | 3086 | 9.524496 | AAATGGACTACTACATACGGATGTATA | 57.476 | 33.333 | 20.64 | 13.41 | 45.42 | 1.47 |
1319 | 3087 | 8.304596 | CAAATGGACTACTACATACGGATGTAT | 58.695 | 37.037 | 20.64 | 13.02 | 45.42 | 2.29 |
1320 | 3088 | 7.503230 | TCAAATGGACTACTACATACGGATGTA | 59.497 | 37.037 | 19.32 | 19.32 | 44.77 | 2.29 |
1322 | 3090 | 6.745116 | TCAAATGGACTACTACATACGGATG | 58.255 | 40.000 | 5.94 | 5.94 | 39.16 | 3.51 |
1323 | 3091 | 6.971726 | TCAAATGGACTACTACATACGGAT | 57.028 | 37.500 | 0.00 | 0.00 | 0.00 | 4.18 |
1324 | 3092 | 6.778834 | TTCAAATGGACTACTACATACGGA | 57.221 | 37.500 | 0.00 | 0.00 | 0.00 | 4.69 |
1325 | 3093 | 8.433421 | AATTTCAAATGGACTACTACATACGG | 57.567 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
1326 | 3094 | 9.314321 | AGAATTTCAAATGGACTACTACATACG | 57.686 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
1347 | 3115 | 9.244292 | GGAGGGAGTATTTGTCTTTTTAGAATT | 57.756 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
1348 | 3116 | 7.553044 | CGGAGGGAGTATTTGTCTTTTTAGAAT | 59.447 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
1349 | 3117 | 6.877322 | CGGAGGGAGTATTTGTCTTTTTAGAA | 59.123 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
1350 | 3118 | 6.013984 | ACGGAGGGAGTATTTGTCTTTTTAGA | 60.014 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
1351 | 3119 | 6.171213 | ACGGAGGGAGTATTTGTCTTTTTAG | 58.829 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
1352 | 3120 | 6.117975 | ACGGAGGGAGTATTTGTCTTTTTA | 57.882 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
1353 | 3121 | 4.981812 | ACGGAGGGAGTATTTGTCTTTTT | 58.018 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
1354 | 3122 | 4.565028 | GGACGGAGGGAGTATTTGTCTTTT | 60.565 | 45.833 | 0.00 | 0.00 | 0.00 | 2.27 |
1355 | 3123 | 3.055312 | GGACGGAGGGAGTATTTGTCTTT | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
1356 | 3124 | 2.500504 | GGACGGAGGGAGTATTTGTCTT | 59.499 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1357 | 3125 | 2.108970 | GGACGGAGGGAGTATTTGTCT | 58.891 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
1358 | 3126 | 1.138464 | GGGACGGAGGGAGTATTTGTC | 59.862 | 57.143 | 0.00 | 0.00 | 0.00 | 3.18 |
1359 | 3127 | 1.201424 | GGGACGGAGGGAGTATTTGT | 58.799 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
1360 | 3128 | 1.200519 | TGGGACGGAGGGAGTATTTG | 58.799 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
1361 | 3129 | 1.961133 | TTGGGACGGAGGGAGTATTT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1362 | 3130 | 1.961133 | TTTGGGACGGAGGGAGTATT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
1363 | 3131 | 1.961133 | TTTTGGGACGGAGGGAGTAT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
1364 | 3132 | 1.961133 | ATTTTGGGACGGAGGGAGTA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1365 | 3133 | 1.004394 | GAATTTTGGGACGGAGGGAGT | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
1366 | 3134 | 1.282157 | AGAATTTTGGGACGGAGGGAG | 59.718 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
1367 | 3135 | 1.368374 | AGAATTTTGGGACGGAGGGA | 58.632 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1368 | 3136 | 1.818674 | CAAGAATTTTGGGACGGAGGG | 59.181 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
1369 | 3137 | 2.488153 | GACAAGAATTTTGGGACGGAGG | 59.512 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1370 | 3138 | 3.412386 | AGACAAGAATTTTGGGACGGAG | 58.588 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
1371 | 3139 | 3.502123 | AGACAAGAATTTTGGGACGGA | 57.498 | 42.857 | 0.00 | 0.00 | 0.00 | 4.69 |
1372 | 3140 | 5.001232 | TCTAAGACAAGAATTTTGGGACGG | 58.999 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
1373 | 3141 | 6.743575 | ATCTAAGACAAGAATTTTGGGACG | 57.256 | 37.500 | 5.68 | 0.00 | 0.00 | 4.79 |
1374 | 3142 | 8.360390 | ACAAATCTAAGACAAGAATTTTGGGAC | 58.640 | 33.333 | 0.00 | 0.00 | 33.04 | 4.46 |
1375 | 3143 | 8.477419 | ACAAATCTAAGACAAGAATTTTGGGA | 57.523 | 30.769 | 0.00 | 0.00 | 33.04 | 4.37 |
1376 | 3144 | 8.579863 | AGACAAATCTAAGACAAGAATTTTGGG | 58.420 | 33.333 | 0.00 | 0.00 | 33.04 | 4.12 |
1384 | 3152 | 9.582431 | CCGTATTTAGACAAATCTAAGACAAGA | 57.418 | 33.333 | 9.81 | 0.00 | 45.93 | 3.02 |
1385 | 3153 | 9.582431 | TCCGTATTTAGACAAATCTAAGACAAG | 57.418 | 33.333 | 9.81 | 3.88 | 45.93 | 3.16 |
1387 | 3155 | 9.529325 | CATCCGTATTTAGACAAATCTAAGACA | 57.471 | 33.333 | 9.81 | 0.00 | 45.93 | 3.41 |
1388 | 3156 | 9.530633 | ACATCCGTATTTAGACAAATCTAAGAC | 57.469 | 33.333 | 0.00 | 0.83 | 45.93 | 3.01 |
1413 | 3181 | 7.037438 | TCCGTCACTAAAATGTAACTGGATAC | 58.963 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
1414 | 3182 | 7.172868 | TCCGTCACTAAAATGTAACTGGATA | 57.827 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1415 | 3183 | 6.045072 | TCCGTCACTAAAATGTAACTGGAT | 57.955 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
1416 | 3184 | 5.471556 | TCCGTCACTAAAATGTAACTGGA | 57.528 | 39.130 | 0.00 | 0.00 | 0.00 | 3.86 |
1417 | 3185 | 4.630069 | CCTCCGTCACTAAAATGTAACTGG | 59.370 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
1418 | 3186 | 4.630069 | CCCTCCGTCACTAAAATGTAACTG | 59.370 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
1419 | 3187 | 4.529377 | TCCCTCCGTCACTAAAATGTAACT | 59.471 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
1420 | 3188 | 4.824289 | TCCCTCCGTCACTAAAATGTAAC | 58.176 | 43.478 | 0.00 | 0.00 | 0.00 | 2.50 |
1421 | 3189 | 4.529377 | ACTCCCTCCGTCACTAAAATGTAA | 59.471 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
1422 | 3190 | 4.091549 | ACTCCCTCCGTCACTAAAATGTA | 58.908 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
1423 | 3191 | 2.904434 | ACTCCCTCCGTCACTAAAATGT | 59.096 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
1424 | 3192 | 3.611766 | ACTCCCTCCGTCACTAAAATG | 57.388 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
1425 | 3193 | 5.952347 | AATACTCCCTCCGTCACTAAAAT | 57.048 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
1426 | 3194 | 5.750352 | AAATACTCCCTCCGTCACTAAAA | 57.250 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
1427 | 3195 | 6.189859 | TCTAAATACTCCCTCCGTCACTAAA | 58.810 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
1428 | 3196 | 5.759059 | TCTAAATACTCCCTCCGTCACTAA | 58.241 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
1429 | 3197 | 5.378230 | TCTAAATACTCCCTCCGTCACTA | 57.622 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
1430 | 3198 | 4.246712 | TCTAAATACTCCCTCCGTCACT | 57.753 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1431 | 3199 | 4.996788 | TTCTAAATACTCCCTCCGTCAC | 57.003 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
1432 | 3200 | 4.142315 | CGTTTCTAAATACTCCCTCCGTCA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 4.35 |
1433 | 3201 | 4.357996 | CGTTTCTAAATACTCCCTCCGTC | 58.642 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
1434 | 3202 | 3.131755 | CCGTTTCTAAATACTCCCTCCGT | 59.868 | 47.826 | 0.00 | 0.00 | 0.00 | 4.69 |
1435 | 3203 | 3.382546 | TCCGTTTCTAAATACTCCCTCCG | 59.617 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
1436 | 3204 | 5.298347 | CATCCGTTTCTAAATACTCCCTCC | 58.702 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
1437 | 3205 | 5.070047 | TCCATCCGTTTCTAAATACTCCCTC | 59.930 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1438 | 3206 | 4.966805 | TCCATCCGTTTCTAAATACTCCCT | 59.033 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
1439 | 3207 | 5.163332 | ACTCCATCCGTTTCTAAATACTCCC | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1440 | 3208 | 5.915175 | ACTCCATCCGTTTCTAAATACTCC | 58.085 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
1451 | 3219 | 9.357161 | GGAGATAGATATATACTCCATCCGTTT | 57.643 | 37.037 | 15.34 | 0.00 | 44.31 | 3.60 |
1452 | 3220 | 8.927675 | GGAGATAGATATATACTCCATCCGTT | 57.072 | 38.462 | 15.34 | 0.00 | 44.31 | 4.44 |
1459 | 3227 | 9.821240 | ATGGACATGGAGATAGATATATACTCC | 57.179 | 37.037 | 14.19 | 14.19 | 44.90 | 3.85 |
1465 | 3233 | 8.427276 | GCATTCATGGACATGGAGATAGATATA | 58.573 | 37.037 | 11.98 | 0.00 | 39.24 | 0.86 |
1466 | 3234 | 7.092578 | TGCATTCATGGACATGGAGATAGATAT | 60.093 | 37.037 | 11.98 | 0.00 | 39.24 | 1.63 |
1471 | 3239 | 4.392047 | GTGCATTCATGGACATGGAGATA | 58.608 | 43.478 | 11.98 | 0.00 | 46.68 | 1.98 |
1490 | 3259 | 6.402983 | GCATGGAGATAAATACTAGCATGTGC | 60.403 | 42.308 | 0.00 | 0.00 | 42.49 | 4.57 |
1498 | 3267 | 6.950860 | TCATGGGCATGGAGATAAATACTA | 57.049 | 37.500 | 0.00 | 0.00 | 39.24 | 1.82 |
1500 | 3269 | 6.096001 | GGATTCATGGGCATGGAGATAAATAC | 59.904 | 42.308 | 0.00 | 0.00 | 39.24 | 1.89 |
1501 | 3270 | 6.189859 | GGATTCATGGGCATGGAGATAAATA | 58.810 | 40.000 | 0.00 | 0.00 | 39.24 | 1.40 |
1502 | 3271 | 5.021458 | GGATTCATGGGCATGGAGATAAAT | 58.979 | 41.667 | 0.00 | 0.00 | 39.24 | 1.40 |
1503 | 3272 | 4.140971 | TGGATTCATGGGCATGGAGATAAA | 60.141 | 41.667 | 0.00 | 0.00 | 39.24 | 1.40 |
1504 | 3273 | 3.398629 | TGGATTCATGGGCATGGAGATAA | 59.601 | 43.478 | 0.00 | 0.00 | 39.24 | 1.75 |
1506 | 3275 | 1.784593 | TGGATTCATGGGCATGGAGAT | 59.215 | 47.619 | 0.00 | 0.00 | 39.24 | 2.75 |
1507 | 3276 | 1.133699 | GTGGATTCATGGGCATGGAGA | 60.134 | 52.381 | 0.00 | 0.00 | 39.24 | 3.71 |
1508 | 3277 | 1.325355 | GTGGATTCATGGGCATGGAG | 58.675 | 55.000 | 0.00 | 0.00 | 39.24 | 3.86 |
1509 | 3278 | 0.630134 | TGTGGATTCATGGGCATGGA | 59.370 | 50.000 | 0.00 | 0.00 | 39.24 | 3.41 |
1511 | 3280 | 1.826096 | TGTTGTGGATTCATGGGCATG | 59.174 | 47.619 | 0.00 | 0.00 | 40.09 | 4.06 |
1512 | 3281 | 2.234896 | TGTTGTGGATTCATGGGCAT | 57.765 | 45.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1514 | 3283 | 1.472026 | GCATGTTGTGGATTCATGGGC | 60.472 | 52.381 | 0.00 | 0.00 | 39.20 | 5.36 |
1515 | 3284 | 1.137479 | GGCATGTTGTGGATTCATGGG | 59.863 | 52.381 | 0.00 | 0.00 | 39.20 | 4.00 |
1516 | 3285 | 1.826096 | TGGCATGTTGTGGATTCATGG | 59.174 | 47.619 | 0.00 | 0.00 | 39.20 | 3.66 |
1517 | 3286 | 3.812156 | ATGGCATGTTGTGGATTCATG | 57.188 | 42.857 | 0.00 | 0.00 | 40.98 | 3.07 |
1518 | 3287 | 3.770388 | TGAATGGCATGTTGTGGATTCAT | 59.230 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
1519 | 3288 | 3.056678 | GTGAATGGCATGTTGTGGATTCA | 60.057 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
1520 | 3289 | 3.194116 | AGTGAATGGCATGTTGTGGATTC | 59.806 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
1521 | 3290 | 3.056393 | CAGTGAATGGCATGTTGTGGATT | 60.056 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
1522 | 3291 | 2.494471 | CAGTGAATGGCATGTTGTGGAT | 59.506 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1523 | 3292 | 1.887854 | CAGTGAATGGCATGTTGTGGA | 59.112 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
1524 | 3293 | 1.887854 | TCAGTGAATGGCATGTTGTGG | 59.112 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
1525 | 3294 | 2.555325 | AGTCAGTGAATGGCATGTTGTG | 59.445 | 45.455 | 0.00 | 0.00 | 35.29 | 3.33 |
1526 | 3295 | 2.816087 | GAGTCAGTGAATGGCATGTTGT | 59.184 | 45.455 | 0.00 | 0.00 | 35.29 | 3.32 |
1527 | 3296 | 2.159612 | CGAGTCAGTGAATGGCATGTTG | 60.160 | 50.000 | 0.00 | 0.00 | 35.29 | 3.33 |
1528 | 3297 | 2.079158 | CGAGTCAGTGAATGGCATGTT | 58.921 | 47.619 | 0.00 | 0.00 | 35.29 | 2.71 |
1529 | 3298 | 1.002430 | ACGAGTCAGTGAATGGCATGT | 59.998 | 47.619 | 0.00 | 0.00 | 35.29 | 3.21 |
1530 | 3299 | 1.730501 | ACGAGTCAGTGAATGGCATG | 58.269 | 50.000 | 0.00 | 0.00 | 35.29 | 4.06 |
1531 | 3300 | 2.479566 | AACGAGTCAGTGAATGGCAT | 57.520 | 45.000 | 0.00 | 0.00 | 35.29 | 4.40 |
1532 | 3301 | 2.143122 | GAAACGAGTCAGTGAATGGCA | 58.857 | 47.619 | 0.00 | 0.00 | 35.29 | 4.92 |
1533 | 3302 | 1.464997 | GGAAACGAGTCAGTGAATGGC | 59.535 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
1534 | 3303 | 3.045601 | AGGAAACGAGTCAGTGAATGG | 57.954 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
1535 | 3304 | 5.007626 | TGAAAAGGAAACGAGTCAGTGAATG | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 2.67 |
1536 | 3305 | 5.123227 | TGAAAAGGAAACGAGTCAGTGAAT | 58.877 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
1537 | 3306 | 4.509616 | TGAAAAGGAAACGAGTCAGTGAA | 58.490 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
1538 | 3307 | 4.119862 | CTGAAAAGGAAACGAGTCAGTGA | 58.880 | 43.478 | 0.00 | 0.00 | 33.88 | 3.41 |
1539 | 3308 | 3.248602 | CCTGAAAAGGAAACGAGTCAGTG | 59.751 | 47.826 | 0.00 | 0.00 | 35.59 | 3.66 |
1540 | 3309 | 3.118371 | ACCTGAAAAGGAAACGAGTCAGT | 60.118 | 43.478 | 0.00 | 0.00 | 35.59 | 3.41 |
1541 | 3310 | 3.248602 | CACCTGAAAAGGAAACGAGTCAG | 59.751 | 47.826 | 0.00 | 0.00 | 36.49 | 3.51 |
1542 | 3311 | 3.202906 | CACCTGAAAAGGAAACGAGTCA | 58.797 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1543 | 3312 | 3.203716 | ACACCTGAAAAGGAAACGAGTC | 58.796 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
1544 | 3313 | 3.277142 | ACACCTGAAAAGGAAACGAGT | 57.723 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
1545 | 3314 | 3.625764 | TGAACACCTGAAAAGGAAACGAG | 59.374 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
1546 | 3315 | 3.375922 | GTGAACACCTGAAAAGGAAACGA | 59.624 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
1547 | 3316 | 3.691498 | GTGAACACCTGAAAAGGAAACG | 58.309 | 45.455 | 0.00 | 0.00 | 0.00 | 3.60 |
1548 | 3317 | 3.691498 | CGTGAACACCTGAAAAGGAAAC | 58.309 | 45.455 | 0.00 | 0.00 | 0.00 | 2.78 |
1572 | 3341 | 1.094073 | GTCGATGCATCTGCCTTGCT | 61.094 | 55.000 | 23.73 | 0.00 | 40.77 | 3.91 |
1577 | 3346 | 0.877649 | ACGATGTCGATGCATCTGCC | 60.878 | 55.000 | 23.73 | 11.79 | 42.14 | 4.85 |
1589 | 3358 | 0.734253 | AAGCTCTGCACGACGATGTC | 60.734 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1590 | 3359 | 0.734253 | GAAGCTCTGCACGACGATGT | 60.734 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1591 | 3360 | 1.737196 | CGAAGCTCTGCACGACGATG | 61.737 | 60.000 | 0.00 | 0.00 | 34.12 | 3.84 |
1592 | 3361 | 1.515088 | CGAAGCTCTGCACGACGAT | 60.515 | 57.895 | 0.00 | 0.00 | 34.12 | 3.73 |
1593 | 3362 | 2.126850 | CGAAGCTCTGCACGACGA | 60.127 | 61.111 | 0.00 | 0.00 | 34.12 | 4.20 |
1594 | 3363 | 2.874010 | ATCCGAAGCTCTGCACGACG | 62.874 | 60.000 | 0.00 | 0.00 | 34.12 | 5.12 |
1595 | 3364 | 1.142778 | GATCCGAAGCTCTGCACGAC | 61.143 | 60.000 | 0.00 | 0.00 | 34.12 | 4.34 |
1649 | 3418 | 0.955919 | CGAAGTGCTGAGGTTTCCCC | 60.956 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1690 | 3459 | 1.630244 | GATGTTCTTCTGCGCGCACT | 61.630 | 55.000 | 33.09 | 9.12 | 0.00 | 4.40 |
1691 | 3460 | 1.225854 | GATGTTCTTCTGCGCGCAC | 60.226 | 57.895 | 33.09 | 20.20 | 0.00 | 5.34 |
1718 | 3487 | 3.978193 | TGGTTGAAGCCCGGGCAT | 61.978 | 61.111 | 45.13 | 36.80 | 44.88 | 4.40 |
1734 | 3503 | 1.536922 | CGGGAAGACATCGATGGAGTG | 60.537 | 57.143 | 28.09 | 5.85 | 0.00 | 3.51 |
1872 | 3641 | 3.003763 | GGTGGAGGAGACGGGCTT | 61.004 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
1916 | 3685 | 5.888982 | AAGACCATCTATTCACCCGTTAT | 57.111 | 39.130 | 0.00 | 0.00 | 0.00 | 1.89 |
1918 | 3687 | 5.365605 | TCATAAGACCATCTATTCACCCGTT | 59.634 | 40.000 | 0.00 | 0.00 | 0.00 | 4.44 |
1919 | 3688 | 4.899457 | TCATAAGACCATCTATTCACCCGT | 59.101 | 41.667 | 0.00 | 0.00 | 0.00 | 5.28 |
1921 | 3690 | 7.227156 | ACAATCATAAGACCATCTATTCACCC | 58.773 | 38.462 | 0.00 | 0.00 | 0.00 | 4.61 |
1959 | 3786 | 7.228308 | AGACAGATTTTCTTGTCTCAAAGGAAG | 59.772 | 37.037 | 1.53 | 0.00 | 33.04 | 3.46 |
1982 | 3809 | 5.852827 | AGCTCTTATTGCCAGAATAGAGAC | 58.147 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
2010 | 3837 | 4.035017 | CCTTCAAAACTTGCAGTTACACG | 58.965 | 43.478 | 2.60 | 0.00 | 37.47 | 4.49 |
2077 | 3909 | 7.134815 | CGCTGAAAATTATAAGCTGCAACTAT | 58.865 | 34.615 | 1.02 | 0.00 | 33.41 | 2.12 |
2175 | 4007 | 0.660300 | GCCAACAAGCTTACACGCAC | 60.660 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2388 | 4222 | 8.531622 | TGTGACGGATTAATAAAAACTTCGTA | 57.468 | 30.769 | 0.00 | 0.00 | 0.00 | 3.43 |
2473 | 4307 | 5.050490 | GCGAAGTATGCTTTATCTCTCCAA | 58.950 | 41.667 | 0.00 | 0.00 | 34.61 | 3.53 |
2785 | 4629 | 1.616159 | GTGTTGTTGGGGCAGTATGT | 58.384 | 50.000 | 0.00 | 0.00 | 39.31 | 2.29 |
2801 | 4645 | 4.036971 | GTCGAGATGAGCTAAGTATGGTGT | 59.963 | 45.833 | 0.00 | 0.00 | 0.00 | 4.16 |
2817 | 4661 | 1.227089 | GATGCTGCGGTGTCGAGAT | 60.227 | 57.895 | 0.00 | 0.00 | 39.00 | 2.75 |
2948 | 4843 | 3.837213 | AAATGGTTTCATCACGAGCTG | 57.163 | 42.857 | 0.00 | 0.00 | 32.24 | 4.24 |
2972 | 4867 | 7.433708 | TTTATGAAGATATAACACCGCATGG | 57.566 | 36.000 | 0.00 | 0.00 | 42.84 | 3.66 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.