AutoCloner

Multiple sequence alignment - TraesCS5B01G484400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5B01G484400	chr5B	100.000	5758	0	0	1	5758	656045465	656051222	0.000000e+00	10634.0
1	TraesCS5B01G484400	chr5B	88.596	342	33	4	943	1282	656040742	656041079	1.490000e-110	411.0
2	TraesCS5B01G484400	chr5B	92.222	90	5	2	113	200	656036914	656037003	6.060000e-25	126.0
3	TraesCS5B01G484400	chr5B	82.759	145	18	4	305	449	656037308	656037445	7.840000e-24	122.0
4	TraesCS5B01G484400	chr5B	81.522	92	13	4	944	1032	566069813	566069903	8.000000e-09	73.1
5	TraesCS5B01G484400	chr5D	95.482	3453	101	7	1302	4727	520650919	520654343	0.000000e+00	5461.0
6	TraesCS5B01G484400	chr5D	85.597	972	96	21	4765	5728	520654648	520655583	0.000000e+00	979.0
7	TraesCS5B01G484400	chr5D	85.845	657	51	14	1420	2049	520639826	520640467	0.000000e+00	660.0
8	TraesCS5B01G484400	chr5D	90.591	457	29	7	63	516	520648753	520649198	1.380000e-165	593.0
9	TraesCS5B01G484400	chr5D	88.047	343	34	5	943	1282	520639431	520639769	3.230000e-107	399.0
10	TraesCS5B01G484400	chr5D	87.833	263	26	3	596	853	520650675	520650936	2.610000e-78	303.0
11	TraesCS5B01G484400	chr5D	96.512	86	2	1	113	197	520636548	520636633	2.160000e-29	141.0
12	TraesCS5B01G484400	chr5D	86.538	104	7	3	349	449	520637216	520637315	2.190000e-19	108.0
13	TraesCS5B01G484400	chr5A	93.753	3634	167	23	1420	5006	648855009	648858629	0.000000e+00	5398.0
14	TraesCS5B01G484400	chr5A	87.185	874	78	22	4859	5720	648859008	648859859	0.000000e+00	963.0
15	TraesCS5B01G484400	chr5A	88.309	479	34	11	63	533	648851617	648852081	6.520000e-154	555.0
16	TraesCS5B01G484400	chr5A	86.804	341	41	4	943	1282	648790609	648790946	1.510000e-100	377.0
17	TraesCS5B01G484400	chr5A	86.111	288	36	4	569	853	648854240	648854526	2.020000e-79	307.0
18	TraesCS5B01G484400	chr5A	78.523	298	18	26	113	369	648787841	648788133	2.780000e-33	154.0
19	TraesCS5B01G484400	chr5A	100.000	51	0	0	1302	1352	648854508	648854558	1.710000e-15	95.3
20	TraesCS5B01G484400	chr7D	86.228	167	20	1	3190	3356	262577102	262576939	1.650000e-40	178.0
21	TraesCS5B01G484400	chr7D	79.545	176	21	9	5570	5731	175610667	175610493	1.700000e-20	111.0
22	TraesCS5B01G484400	chr7D	100.000	28	0	0	858	885	165884626	165884653	1.000000e-02	52.8
23	TraesCS5B01G484400	chr3D	73.333	555	101	37	5218	5758	571812551	571813072	1.660000e-35	161.0
24	TraesCS5B01G484400	chr3D	77.368	190	34	9	5549	5732	612294431	612294245	2.840000e-18	104.0
25	TraesCS5B01G484400	chr3D	97.059	34	1	0	852	885	605638251	605638284	2.240000e-04	58.4
26	TraesCS5B01G484400	chr1D	94.286	105	6	0	4197	4301	468374589	468374693	1.660000e-35	161.0
27	TraesCS5B01G484400	chr1D	76.077	209	28	16	5559	5747	383725227	383725433	7.950000e-14	89.8
28	TraesCS5B01G484400	chr1D	93.023	43	3	0	5397	5439	462269614	462269572	4.820000e-06	63.9
29	TraesCS5B01G484400	chr1D	94.286	35	2	0	858	892	447368301	447368335	3.000000e-03	54.7
30	TraesCS5B01G484400	chr2B	94.000	100	6	0	3339	3438	789128477	789128378	9.990000e-33	152.0
31	TraesCS5B01G484400	chr7A	92.553	94	7	0	4208	4301	671699513	671699420	1.010000e-27	135.0
32	TraesCS5B01G484400	chr7A	82.482	137	15	7	5608	5736	63385373	63385508	1.700000e-20	111.0
33	TraesCS5B01G484400	chr7A	94.286	35	2	0	852	886	696635858	696635892	3.000000e-03	54.7
34	TraesCS5B01G484400	chr2A	82.400	125	16	4	5611	5732	524863627	524863506	2.840000e-18	104.0
35	TraesCS5B01G484400	chr2A	79.487	156	19	12	5385	5532	759175730	759175880	1.320000e-16	99.0
36	TraesCS5B01G484400	chr2A	94.444	36	2	0	852	887	658470307	658470342	8.060000e-04	56.5
37	TraesCS5B01G484400	chr2A	94.286	35	2	0	852	886	735976657	735976691	3.000000e-03	54.7
38	TraesCS5B01G484400	chrUn	91.667	72	6	0	4230	4301	23722077	23722006	3.670000e-17	100.0
39	TraesCS5B01G484400	chrUn	94.000	50	1	1	3369	3416	83023730	83023779	2.230000e-09	75.0
40	TraesCS5B01G484400	chr7B	80.916	131	17	5	5609	5732	71134505	71134376	4.750000e-16	97.1
41	TraesCS5B01G484400	chr7B	93.220	59	4	0	3271	3329	43206618	43206560	2.860000e-13	87.9
42	TraesCS5B01G484400	chr6D	94.915	59	3	0	3271	3329	205119221	205119279	6.140000e-15	93.5
43	TraesCS5B01G484400	chr6D	92.105	38	3	0	852	889	433278786	433278823	3.000000e-03	54.7
44	TraesCS5B01G484400	chr1A	76.351	148	32	3	5386	5532	532473226	532473371	6.190000e-10	76.8
45	TraesCS5B01G484400	chr1A	95.238	42	2	0	3372	3413	569372776	569372735	3.720000e-07	67.6
46	TraesCS5B01G484400	chr1B	95.556	45	2	0	3369	3413	631257163	631257207	8.000000e-09	73.1
47	TraesCS5B01G484400	chr6B	90.385	52	5	0	3278	3329	720008501	720008552	1.040000e-07	69.4
48	TraesCS5B01G484400	chr3A	92.105	38	3	0	858	895	513933704	513933667	3.000000e-03	54.7

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5B01G484400	chr5B	656045465	656051222	5757	False	10634.000000	10634	100.00000	1	5758	1	chr5B.!!$F2	5757
1	TraesCS5B01G484400	chr5B	656036914	656041079	4165	False	219.666667	411	87.85900	113	1282	3	chr5B.!!$F3	1169
2	TraesCS5B01G484400	chr5D	520648753	520655583	6830	False	1834.000000	5461	89.87575	63	5728	4	chr5D.!!$F2	5665
3	TraesCS5B01G484400	chr5D	520636548	520640467	3919	False	327.000000	660	89.23550	113	2049	4	chr5D.!!$F1	1936
4	TraesCS5B01G484400	chr5A	648851617	648859859	8242	False	1463.660000	5398	91.07160	63	5720	5	chr5A.!!$F2	5657
5	TraesCS5B01G484400	chr5A	648787841	648790946	3105	False	265.500000	377	82.66350	113	1282	2	chr5A.!!$F1	1169

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
812	5409	0.036306	TTCCTTTTCCTCTCCACGCC	59.964	55.0	0.00	0.0	0.00	5.68	F
879	5476	0.324943	CCTTGCGAGAGGGGAAAGAA	59.675	55.0	1.22	0.0	32.94	2.52	F
1446	8667	0.612229	ACACAGCTCCATGTCTCCTG	59.388	55.0	0.00	0.0	0.00	3.86	F
2394	9658	0.908910	TGGTGGACAAGATGCCGTAT	59.091	50.0	0.00	0.0	0.00	3.06	F
3237	10501	0.317103	CGTCCGACGAAGCTATGAGG	60.317	60.0	16.03	0.0	46.05	3.86	F
4322	11586	1.074319	TTTGACACGATACCGAGCGC	61.074	55.0	0.00	0.0	38.26	5.92	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2089	9353	0.034616	GCTCCTTGTGCTGTCTCTGT	59.965	55.0	0.00	0.00	0.00	3.41	R
2200	9464	0.103208	ACCGCTTCCGAGCTCATTAG	59.897	55.0	15.40	7.99	46.96	1.73	R
3237	10501	0.958876	CCGCCCTGTTACCCACTTTC	60.959	60.0	0.00	0.00	0.00	2.62	R
3962	11226	0.941463	GTCTAGCATCCACATCGCCG	60.941	60.0	0.00	0.00	0.00	6.46	R
4675	11959	0.947244	CAACTGGAACTGCAGTCCAC	59.053	55.0	25.10	17.27	0.00	4.02	R
5286	13375	0.455633	CACAGGAAATGCGCTTCAGC	60.456	55.0	9.73	0.00	37.78	4.26	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
21	22	4.465632	TGACGCTGGATTACAATACTGT	57.534	40.909	0.00	0.00	39.75	3.55
22	23	4.827692	TGACGCTGGATTACAATACTGTT	58.172	39.130	0.00	0.00	36.96	3.16
23	24	4.868171	TGACGCTGGATTACAATACTGTTC	59.132	41.667	0.00	0.00	36.96	3.18
24	25	5.086104	ACGCTGGATTACAATACTGTTCT	57.914	39.130	0.00	0.00	36.96	3.01
25	26	5.488341	ACGCTGGATTACAATACTGTTCTT	58.512	37.500	0.00	0.00	36.96	2.52
26	27	5.581085	ACGCTGGATTACAATACTGTTCTTC	59.419	40.000	0.00	0.00	36.96	2.87
27	28	5.006746	CGCTGGATTACAATACTGTTCTTCC	59.993	44.000	0.00	0.00	36.96	3.46
28	29	5.297029	GCTGGATTACAATACTGTTCTTCCC	59.703	44.000	0.00	0.00	36.96	3.97
29	30	6.636454	TGGATTACAATACTGTTCTTCCCT	57.364	37.500	0.00	0.00	36.96	4.20
30	31	6.414732	TGGATTACAATACTGTTCTTCCCTG	58.585	40.000	0.00	0.00	36.96	4.45
31	32	6.214615	TGGATTACAATACTGTTCTTCCCTGA	59.785	38.462	0.00	0.00	36.96	3.86
32	33	6.763610	GGATTACAATACTGTTCTTCCCTGAG	59.236	42.308	0.00	0.00	36.96	3.35
33	34	6.928348	TTACAATACTGTTCTTCCCTGAGA	57.072	37.500	0.00	0.00	36.96	3.27
34	35	5.413309	ACAATACTGTTCTTCCCTGAGAG	57.587	43.478	0.00	0.00	28.57	3.20
35	36	5.087323	ACAATACTGTTCTTCCCTGAGAGA	58.913	41.667	0.00	0.00	28.57	3.10
36	37	5.723887	ACAATACTGTTCTTCCCTGAGAGAT	59.276	40.000	0.00	0.00	28.57	2.75
37	38	6.897966	ACAATACTGTTCTTCCCTGAGAGATA	59.102	38.462	0.00	0.00	28.57	1.98
38	39	6.969993	ATACTGTTCTTCCCTGAGAGATAC	57.030	41.667	0.00	0.00	0.00	2.24
39	40	4.027437	ACTGTTCTTCCCTGAGAGATACC	58.973	47.826	0.00	0.00	0.00	2.73
40	41	4.264623	ACTGTTCTTCCCTGAGAGATACCT	60.265	45.833	0.00	0.00	0.00	3.08
41	42	4.026744	TGTTCTTCCCTGAGAGATACCTG	58.973	47.826	0.00	0.00	0.00	4.00
42	43	3.320610	TCTTCCCTGAGAGATACCTGG	57.679	52.381	0.00	0.00	0.00	4.45
43	44	1.691434	CTTCCCTGAGAGATACCTGGC	59.309	57.143	0.00	0.00	0.00	4.85
44	45	0.468214	TCCCTGAGAGATACCTGGCG	60.468	60.000	0.00	0.00	0.00	5.69
45	46	1.365633	CCTGAGAGATACCTGGCGC	59.634	63.158	0.00	0.00	0.00	6.53
46	47	1.112315	CCTGAGAGATACCTGGCGCT	61.112	60.000	7.64	0.00	0.00	5.92
47	48	0.749649	CTGAGAGATACCTGGCGCTT	59.250	55.000	7.64	0.00	0.00	4.68
48	49	0.747255	TGAGAGATACCTGGCGCTTC	59.253	55.000	7.64	0.00	0.00	3.86
49	50	0.747255	GAGAGATACCTGGCGCTTCA	59.253	55.000	7.64	0.00	0.00	3.02
50	51	0.749649	AGAGATACCTGGCGCTTCAG	59.250	55.000	7.64	7.07	34.70	3.02
55	56	3.298958	CCTGGCGCTTCAGGTCTA	58.701	61.111	20.84	0.00	46.89	2.59
56	57	1.142748	CCTGGCGCTTCAGGTCTAG	59.857	63.158	20.84	0.00	46.89	2.43
57	58	1.608717	CCTGGCGCTTCAGGTCTAGT	61.609	60.000	20.84	0.00	46.89	2.57
58	59	0.247736	CTGGCGCTTCAGGTCTAGTT	59.752	55.000	7.64	0.00	0.00	2.24
59	60	0.037326	TGGCGCTTCAGGTCTAGTTG	60.037	55.000	7.64	0.00	0.00	3.16
60	61	0.741221	GGCGCTTCAGGTCTAGTTGG	60.741	60.000	7.64	0.00	0.00	3.77
61	62	0.037232	GCGCTTCAGGTCTAGTTGGT	60.037	55.000	0.00	0.00	0.00	3.67
64	65	2.288825	CGCTTCAGGTCTAGTTGGTGAA	60.289	50.000	0.00	0.00	0.00	3.18
89	91	2.467305	GTGTTGCTTTGCATACGTGTTG	59.533	45.455	0.00	0.00	38.76	3.33
107	109	0.105778	TGAAGTGACGGTCATGTGCA	59.894	50.000	14.78	7.05	0.00	4.57
108	110	0.792640	GAAGTGACGGTCATGTGCAG	59.207	55.000	14.78	0.00	0.00	4.41
109	111	0.106708	AAGTGACGGTCATGTGCAGT	59.893	50.000	14.78	0.00	0.00	4.40
110	112	0.601046	AGTGACGGTCATGTGCAGTG	60.601	55.000	14.78	0.00	0.00	3.66
111	113	1.960763	TGACGGTCATGTGCAGTGC	60.961	57.895	8.58	8.58	0.00	4.40
236	278	0.230260	CACACATGCAAAAGCAACGC	59.770	50.000	0.00	0.00	0.00	4.84
277	321	2.031420	CCTACTCGTTTCACACAGACGA	60.031	50.000	0.00	0.00	42.76	4.20
320	366	7.416154	TTTCCTAAATAATATTCCGCGTCTG	57.584	36.000	4.92	0.00	0.00	3.51
435	1033	4.953940	AGGAGATGAAATGAGGTCTAGC	57.046	45.455	0.00	0.00	0.00	3.42
444	1042	1.139947	GAGGTCTAGCGCCAGTGAC	59.860	63.158	2.29	7.47	0.00	3.67
449	1047	0.958876	TCTAGCGCCAGTGACGAAGA	60.959	55.000	2.29	1.48	0.00	2.87
477	5027	9.719355	TGATTAGAAAACTAGAGTGTTGCATAA	57.281	29.630	0.00	0.00	0.00	1.90
479	5029	6.487689	AGAAAACTAGAGTGTTGCATAAGC	57.512	37.500	0.00	0.00	42.57	3.09
510	5061	7.770801	AAAAATTCTACAAAGTGGTTTCAGC	57.229	32.000	0.00	0.00	0.00	4.26
522	5073	1.200020	GGTTTCAGCGGATGGAACTTG	59.800	52.381	16.28	0.00	45.52	3.16
524	5075	1.808411	TTCAGCGGATGGAACTTGTC	58.192	50.000	0.00	0.00	0.00	3.18
527	5078	1.734465	CAGCGGATGGAACTTGTCTTC	59.266	52.381	0.00	0.00	0.00	2.87
528	5079	1.347707	AGCGGATGGAACTTGTCTTCA	59.652	47.619	0.00	0.00	0.00	3.02
529	5080	2.151202	GCGGATGGAACTTGTCTTCAA	58.849	47.619	0.00	0.00	0.00	2.69
531	5082	3.004315	GCGGATGGAACTTGTCTTCAAAA	59.996	43.478	0.00	0.00	32.87	2.44
534	5085	6.546395	CGGATGGAACTTGTCTTCAAAATAG	58.454	40.000	0.00	0.00	32.87	1.73
535	5086	6.403636	CGGATGGAACTTGTCTTCAAAATAGG	60.404	42.308	0.00	0.00	32.87	2.57
536	5087	6.434340	GGATGGAACTTGTCTTCAAAATAGGT	59.566	38.462	0.00	0.00	32.87	3.08
538	5089	7.654022	TGGAACTTGTCTTCAAAATAGGTTT	57.346	32.000	0.00	0.00	32.87	3.27
539	5090	7.712797	TGGAACTTGTCTTCAAAATAGGTTTC	58.287	34.615	0.00	0.00	32.87	2.78
542	5093	9.581099	GAACTTGTCTTCAAAATAGGTTTCAAA	57.419	29.630	0.00	0.00	32.87	2.69
544	5095	9.533253	ACTTGTCTTCAAAATAGGTTTCAAATG	57.467	29.630	0.00	0.00	32.87	2.32
572	5137	9.790344	AAATATTTCAATCCCACAAATCAAACA	57.210	25.926	0.00	0.00	0.00	2.83
575	5140	4.615949	TCAATCCCACAAATCAAACAACG	58.384	39.130	0.00	0.00	0.00	4.10
577	5142	3.980646	TCCCACAAATCAAACAACGAG	57.019	42.857	0.00	0.00	0.00	4.18
589	5154	2.844122	ACAACGAGCACAGGAAAAAC	57.156	45.000	0.00	0.00	0.00	2.43
607	5172	7.251281	GGAAAAACTCCTTAGGATTGAAATCG	58.749	38.462	0.00	0.00	41.61	3.34
608	5173	6.759497	AAAACTCCTTAGGATTGAAATCGG	57.241	37.500	0.00	0.00	36.27	4.18
617	5193	5.164620	AGGATTGAAATCGGCCAAAATTT	57.835	34.783	2.24	5.45	36.27	1.82
620	5196	5.063817	GGATTGAAATCGGCCAAAATTTCTG	59.936	40.000	24.46	0.56	40.77	3.02
621	5197	4.599047	TGAAATCGGCCAAAATTTCTGT	57.401	36.364	24.46	2.02	40.77	3.41
623	5199	4.038522	TGAAATCGGCCAAAATTTCTGTGA	59.961	37.500	24.46	10.61	40.77	3.58
625	5201	4.599047	ATCGGCCAAAATTTCTGTGAAA	57.401	36.364	2.24	0.00	0.00	2.69
626	5202	4.599047	TCGGCCAAAATTTCTGTGAAAT	57.401	36.364	2.24	0.25	0.00	2.17
628	5204	4.987912	TCGGCCAAAATTTCTGTGAAATTC	59.012	37.500	15.67	6.31	0.00	2.17
629	5205	4.152223	CGGCCAAAATTTCTGTGAAATTCC	59.848	41.667	15.67	12.19	0.00	3.01
630	5206	5.308014	GGCCAAAATTTCTGTGAAATTCCT	58.692	37.500	15.67	6.61	0.00	3.36
632	5208	6.262944	GGCCAAAATTTCTGTGAAATTCCTTT	59.737	34.615	15.67	6.92	0.00	3.11
633	5209	7.134163	GCCAAAATTTCTGTGAAATTCCTTTG	58.866	34.615	15.67	15.26	0.00	2.77
634	5210	7.012232	GCCAAAATTTCTGTGAAATTCCTTTGA	59.988	33.333	19.44	0.00	0.00	2.69
635	5211	8.337532	CCAAAATTTCTGTGAAATTCCTTTGAC	58.662	33.333	19.44	0.00	0.00	3.18
637	5213	8.877808	AAATTTCTGTGAAATTCCTTTGACTC	57.122	30.769	15.67	0.00	30.75	3.36
638	5214	5.673337	TTCTGTGAAATTCCTTTGACTCG	57.327	39.130	0.00	0.00	30.75	4.18
640	5216	4.750098	TCTGTGAAATTCCTTTGACTCGAC	59.250	41.667	0.00	0.00	30.75	4.20
641	5217	3.813166	TGTGAAATTCCTTTGACTCGACC	59.187	43.478	0.00	0.00	30.75	4.79
642	5218	3.188667	GTGAAATTCCTTTGACTCGACCC	59.811	47.826	0.00	0.00	0.00	4.46
643	5219	3.072476	TGAAATTCCTTTGACTCGACCCT	59.928	43.478	0.00	0.00	0.00	4.34
644	5220	4.285003	TGAAATTCCTTTGACTCGACCCTA	59.715	41.667	0.00	0.00	0.00	3.53
646	5222	3.955650	TTCCTTTGACTCGACCCTAAG	57.044	47.619	0.00	0.00	0.00	2.18
647	5223	3.165087	TCCTTTGACTCGACCCTAAGA	57.835	47.619	5.49	0.00	0.00	2.10
652	5249	3.777465	TGACTCGACCCTAAGAATTCG	57.223	47.619	0.00	0.00	0.00	3.34
655	5252	4.104066	GACTCGACCCTAAGAATTCGAAC	58.896	47.826	0.00	0.00	39.83	3.95
656	5253	3.119209	ACTCGACCCTAAGAATTCGAACC	60.119	47.826	0.00	0.00	39.83	3.62
657	5254	2.827322	TCGACCCTAAGAATTCGAACCA	59.173	45.455	0.00	0.00	37.55	3.67
661	5258	3.244770	ACCCTAAGAATTCGAACCAGCAA	60.245	43.478	0.00	0.00	0.00	3.91
666	5263	3.222603	AGAATTCGAACCAGCAAAAGGT	58.777	40.909	0.00	0.00	42.34	3.50
667	5264	3.004734	AGAATTCGAACCAGCAAAAGGTG	59.995	43.478	0.00	0.00	39.86	4.00
668	5265	1.757682	TTCGAACCAGCAAAAGGTGT	58.242	45.000	0.00	0.00	39.86	4.16
670	5267	3.134574	TCGAACCAGCAAAAGGTGTAT	57.865	42.857	0.00	0.00	39.86	2.29
680	5277	6.016777	CCAGCAAAAGGTGTATATCTGATTCC	60.017	42.308	0.00	0.00	0.00	3.01
681	5278	6.543465	CAGCAAAAGGTGTATATCTGATTCCA	59.457	38.462	0.00	0.00	0.00	3.53
683	5280	7.284034	AGCAAAAGGTGTATATCTGATTCCAAG	59.716	37.037	0.00	0.00	0.00	3.61
685	5282	5.832539	AGGTGTATATCTGATTCCAAGGG	57.167	43.478	0.00	0.00	0.00	3.95
686	5283	4.042187	AGGTGTATATCTGATTCCAAGGGC	59.958	45.833	0.00	0.00	0.00	5.19
687	5284	4.202461	GGTGTATATCTGATTCCAAGGGCA	60.202	45.833	0.00	0.00	0.00	5.36
688	5285	5.515534	GGTGTATATCTGATTCCAAGGGCAT	60.516	44.000	0.00	0.00	0.00	4.40
689	5286	6.296432	GGTGTATATCTGATTCCAAGGGCATA	60.296	42.308	0.00	0.00	0.00	3.14
690	5287	7.168219	GTGTATATCTGATTCCAAGGGCATAA	58.832	38.462	0.00	0.00	0.00	1.90
692	5289	8.393259	TGTATATCTGATTCCAAGGGCATAAAT	58.607	33.333	0.00	0.00	0.00	1.40
694	5291	8.814038	ATATCTGATTCCAAGGGCATAAATAC	57.186	34.615	0.00	0.00	0.00	1.89
696	5293	6.672593	TCTGATTCCAAGGGCATAAATACTT	58.327	36.000	0.00	0.00	0.00	2.24
697	5294	6.547141	TCTGATTCCAAGGGCATAAATACTTG	59.453	38.462	0.00	0.00	39.88	3.16
698	5295	5.068987	TGATTCCAAGGGCATAAATACTTGC	59.931	40.000	0.00	0.00	39.09	4.01
699	5296	4.249638	TCCAAGGGCATAAATACTTGCT	57.750	40.909	0.00	0.00	39.09	3.91
700	5297	4.207165	TCCAAGGGCATAAATACTTGCTC	58.793	43.478	0.00	0.00	39.71	4.26
702	5299	4.586001	CCAAGGGCATAAATACTTGCTCAT	59.414	41.667	0.00	0.00	41.93	2.90
703	5300	5.278660	CCAAGGGCATAAATACTTGCTCATC	60.279	44.000	0.00	0.00	41.93	2.92
704	5301	5.316158	AGGGCATAAATACTTGCTCATCT	57.684	39.130	0.00	0.00	41.93	2.90
706	5303	7.025520	AGGGCATAAATACTTGCTCATCTAT	57.974	36.000	0.00	0.00	41.93	1.98
707	5304	7.465116	AGGGCATAAATACTTGCTCATCTATT	58.535	34.615	0.00	0.00	41.93	1.73
708	5305	7.609532	AGGGCATAAATACTTGCTCATCTATTC	59.390	37.037	0.00	0.00	41.93	1.75
709	5306	7.391554	GGGCATAAATACTTGCTCATCTATTCA	59.608	37.037	0.00	0.00	39.21	2.57
710	5307	8.233190	GGCATAAATACTTGCTCATCTATTCAC	58.767	37.037	0.00	0.00	38.88	3.18
711	5308	8.777413	GCATAAATACTTGCTCATCTATTCACA	58.223	33.333	0.00	0.00	35.95	3.58
715	5312	5.496133	ACTTGCTCATCTATTCACAATGC	57.504	39.130	0.00	0.00	0.00	3.56
716	5313	5.191426	ACTTGCTCATCTATTCACAATGCT	58.809	37.500	0.00	0.00	0.00	3.79
717	5314	5.296283	ACTTGCTCATCTATTCACAATGCTC	59.704	40.000	0.00	0.00	0.00	4.26
718	5315	4.132336	TGCTCATCTATTCACAATGCTCC	58.868	43.478	0.00	0.00	0.00	4.70
719	5316	4.132336	GCTCATCTATTCACAATGCTCCA	58.868	43.478	0.00	0.00	0.00	3.86
720	5317	4.024218	GCTCATCTATTCACAATGCTCCAC	60.024	45.833	0.00	0.00	0.00	4.02
721	5318	5.363562	TCATCTATTCACAATGCTCCACT	57.636	39.130	0.00	0.00	0.00	4.00
722	5319	5.748402	TCATCTATTCACAATGCTCCACTT	58.252	37.500	0.00	0.00	0.00	3.16
723	5320	6.182627	TCATCTATTCACAATGCTCCACTTT	58.817	36.000	0.00	0.00	0.00	2.66
724	5321	6.660521	TCATCTATTCACAATGCTCCACTTTT	59.339	34.615	0.00	0.00	0.00	2.27
725	5322	6.500684	TCTATTCACAATGCTCCACTTTTC	57.499	37.500	0.00	0.00	0.00	2.29
726	5323	6.003326	TCTATTCACAATGCTCCACTTTTCA	58.997	36.000	0.00	0.00	0.00	2.69
727	5324	4.998671	TTCACAATGCTCCACTTTTCAA	57.001	36.364	0.00	0.00	0.00	2.69
728	5325	4.998671	TCACAATGCTCCACTTTTCAAA	57.001	36.364	0.00	0.00	0.00	2.69
729	5326	5.534207	TCACAATGCTCCACTTTTCAAAT	57.466	34.783	0.00	0.00	0.00	2.32
730	5327	5.291178	TCACAATGCTCCACTTTTCAAATG	58.709	37.500	0.00	0.00	0.00	2.32
731	5328	5.051816	CACAATGCTCCACTTTTCAAATGT	58.948	37.500	0.00	0.00	0.00	2.71
732	5329	5.524646	CACAATGCTCCACTTTTCAAATGTT	59.475	36.000	0.00	0.00	0.00	2.71
733	5330	5.754890	ACAATGCTCCACTTTTCAAATGTTC	59.245	36.000	0.00	0.00	0.00	3.18
734	5331	4.320608	TGCTCCACTTTTCAAATGTTCC	57.679	40.909	0.00	0.00	0.00	3.62
735	5332	3.960102	TGCTCCACTTTTCAAATGTTCCT	59.040	39.130	0.00	0.00	0.00	3.36
736	5333	4.202141	TGCTCCACTTTTCAAATGTTCCTG	60.202	41.667	0.00	0.00	0.00	3.86
737	5334	4.301628	CTCCACTTTTCAAATGTTCCTGC	58.698	43.478	0.00	0.00	0.00	4.85
738	5335	3.703556	TCCACTTTTCAAATGTTCCTGCA	59.296	39.130	0.00	0.00	0.00	4.41
739	5336	4.053295	CCACTTTTCAAATGTTCCTGCAG	58.947	43.478	6.78	6.78	0.00	4.41
740	5337	4.202141	CCACTTTTCAAATGTTCCTGCAGA	60.202	41.667	17.39	0.00	0.00	4.26
741	5338	5.510179	CCACTTTTCAAATGTTCCTGCAGAT	60.510	40.000	17.39	0.00	0.00	2.90
742	5339	5.404366	CACTTTTCAAATGTTCCTGCAGATG	59.596	40.000	17.39	0.00	0.00	2.90
743	5340	3.581024	TTCAAATGTTCCTGCAGATGC	57.419	42.857	17.39	4.82	42.50	3.91
744	5341	2.799017	TCAAATGTTCCTGCAGATGCT	58.201	42.857	17.39	0.00	42.66	3.79
745	5342	3.159472	TCAAATGTTCCTGCAGATGCTT	58.841	40.909	17.39	0.00	42.66	3.91
746	5343	3.057104	TCAAATGTTCCTGCAGATGCTTG	60.057	43.478	17.39	10.57	42.66	4.01
747	5344	0.815734	ATGTTCCTGCAGATGCTTGC	59.184	50.000	17.39	0.00	44.33	4.01
754	5351	3.477504	GCAGATGCTTGCAAACGAA	57.522	47.368	0.00	0.00	43.53	3.85
755	5352	1.334054	GCAGATGCTTGCAAACGAAG	58.666	50.000	0.00	0.00	43.53	3.79
756	5353	1.069022	GCAGATGCTTGCAAACGAAGA	60.069	47.619	0.00	0.00	43.53	2.87
757	5354	2.415090	GCAGATGCTTGCAAACGAAGAT	60.415	45.455	0.00	0.00	43.53	2.40
758	5355	3.181507	GCAGATGCTTGCAAACGAAGATA	60.182	43.478	0.00	0.00	43.53	1.98
759	5356	4.672542	GCAGATGCTTGCAAACGAAGATAA	60.673	41.667	0.00	0.00	43.53	1.75
760	5357	5.026462	CAGATGCTTGCAAACGAAGATAAG	58.974	41.667	0.00	0.00	0.00	1.73
761	5358	3.201726	TGCTTGCAAACGAAGATAAGC	57.798	42.857	0.00	0.00	40.52	3.09
762	5359	2.551887	TGCTTGCAAACGAAGATAAGCA	59.448	40.909	13.85	13.85	45.55	3.91
763	5360	2.911102	GCTTGCAAACGAAGATAAGCAC	59.089	45.455	0.00	0.00	40.02	4.40
764	5361	3.492313	CTTGCAAACGAAGATAAGCACC	58.508	45.455	0.00	0.00	0.00	5.01
765	5362	2.778299	TGCAAACGAAGATAAGCACCT	58.222	42.857	0.00	0.00	0.00	4.00
766	5363	3.146066	TGCAAACGAAGATAAGCACCTT	58.854	40.909	0.00	0.00	0.00	3.50
767	5364	3.568007	TGCAAACGAAGATAAGCACCTTT	59.432	39.130	0.00	0.00	0.00	3.11
768	5365	4.757657	TGCAAACGAAGATAAGCACCTTTA	59.242	37.500	0.00	0.00	0.00	1.85
769	5366	5.414454	TGCAAACGAAGATAAGCACCTTTAT	59.586	36.000	0.00	0.00	0.00	1.40
770	5367	6.072175	TGCAAACGAAGATAAGCACCTTTATT	60.072	34.615	0.00	0.00	0.00	1.40
771	5368	6.469275	GCAAACGAAGATAAGCACCTTTATTC	59.531	38.462	0.00	0.00	0.00	1.75
772	5369	6.679327	AACGAAGATAAGCACCTTTATTCC	57.321	37.500	0.00	0.00	0.00	3.01
773	5370	5.741011	ACGAAGATAAGCACCTTTATTCCA	58.259	37.500	0.00	0.00	0.00	3.53
774	5371	5.585047	ACGAAGATAAGCACCTTTATTCCAC	59.415	40.000	0.00	0.00	0.00	4.02
775	5372	5.276868	CGAAGATAAGCACCTTTATTCCACG	60.277	44.000	0.00	0.00	0.00	4.94
776	5373	3.877508	AGATAAGCACCTTTATTCCACGC	59.122	43.478	0.00	0.00	0.00	5.34
777	5374	1.173913	AAGCACCTTTATTCCACGCC	58.826	50.000	0.00	0.00	0.00	5.68
778	5375	0.679960	AGCACCTTTATTCCACGCCC	60.680	55.000	0.00	0.00	0.00	6.13
779	5376	0.679960	GCACCTTTATTCCACGCCCT	60.680	55.000	0.00	0.00	0.00	5.19
780	5377	1.407712	GCACCTTTATTCCACGCCCTA	60.408	52.381	0.00	0.00	0.00	3.53
781	5378	2.561569	CACCTTTATTCCACGCCCTAG	58.438	52.381	0.00	0.00	0.00	3.02
782	5379	2.169769	CACCTTTATTCCACGCCCTAGA	59.830	50.000	0.00	0.00	0.00	2.43
783	5380	2.841881	ACCTTTATTCCACGCCCTAGAA	59.158	45.455	0.00	0.00	0.00	2.10
784	5381	3.118371	ACCTTTATTCCACGCCCTAGAAG	60.118	47.826	0.00	0.00	0.00	2.85
785	5382	3.467803	CTTTATTCCACGCCCTAGAAGG	58.532	50.000	0.00	0.00	34.30	3.46
799	5396	6.441088	CCCTAGAAGGCTATATGTTCCTTT	57.559	41.667	0.00	1.95	40.07	3.11
800	5397	6.842676	CCCTAGAAGGCTATATGTTCCTTTT	58.157	40.000	0.00	4.47	40.07	2.27
801	5398	6.937465	CCCTAGAAGGCTATATGTTCCTTTTC	59.063	42.308	0.00	0.00	40.07	2.29
802	5399	6.937465	CCTAGAAGGCTATATGTTCCTTTTCC	59.063	42.308	0.00	0.00	40.07	3.13
803	5400	6.582929	AGAAGGCTATATGTTCCTTTTCCT	57.417	37.500	0.00	0.00	40.07	3.36
804	5401	6.596621	AGAAGGCTATATGTTCCTTTTCCTC	58.403	40.000	0.00	0.00	40.07	3.71
805	5402	6.388394	AGAAGGCTATATGTTCCTTTTCCTCT	59.612	38.462	0.00	0.00	40.07	3.69
806	5403	6.181206	AGGCTATATGTTCCTTTTCCTCTC	57.819	41.667	0.00	0.00	0.00	3.20
807	5404	5.072464	AGGCTATATGTTCCTTTTCCTCTCC	59.928	44.000	0.00	0.00	0.00	3.71
808	5405	5.163195	GGCTATATGTTCCTTTTCCTCTCCA	60.163	44.000	0.00	0.00	0.00	3.86
809	5406	5.760743	GCTATATGTTCCTTTTCCTCTCCAC	59.239	44.000	0.00	0.00	0.00	4.02
810	5407	2.543777	TGTTCCTTTTCCTCTCCACG	57.456	50.000	0.00	0.00	0.00	4.94
811	5408	1.157585	GTTCCTTTTCCTCTCCACGC	58.842	55.000	0.00	0.00	0.00	5.34
812	5409	0.036306	TTCCTTTTCCTCTCCACGCC	59.964	55.000	0.00	0.00	0.00	5.68
813	5410	0.836400	TCCTTTTCCTCTCCACGCCT	60.836	55.000	0.00	0.00	0.00	5.52
814	5411	0.902531	CCTTTTCCTCTCCACGCCTA	59.097	55.000	0.00	0.00	0.00	3.93
815	5412	1.278127	CCTTTTCCTCTCCACGCCTAA	59.722	52.381	0.00	0.00	0.00	2.69
816	5413	2.092914	CCTTTTCCTCTCCACGCCTAAT	60.093	50.000	0.00	0.00	0.00	1.73
817	5414	3.610911	CTTTTCCTCTCCACGCCTAATT	58.389	45.455	0.00	0.00	0.00	1.40
818	5415	4.383770	CCTTTTCCTCTCCACGCCTAATTA	60.384	45.833	0.00	0.00	0.00	1.40
819	5416	4.829872	TTTCCTCTCCACGCCTAATTAA	57.170	40.909	0.00	0.00	0.00	1.40
820	5417	4.829872	TTCCTCTCCACGCCTAATTAAA	57.170	40.909	0.00	0.00	0.00	1.52
821	5418	4.133013	TCCTCTCCACGCCTAATTAAAC	57.867	45.455	0.00	0.00	0.00	2.01
822	5419	3.773119	TCCTCTCCACGCCTAATTAAACT	59.227	43.478	0.00	0.00	0.00	2.66
823	5420	4.957954	TCCTCTCCACGCCTAATTAAACTA	59.042	41.667	0.00	0.00	0.00	2.24
824	5421	5.422970	TCCTCTCCACGCCTAATTAAACTAA	59.577	40.000	0.00	0.00	0.00	2.24
825	5422	5.522824	CCTCTCCACGCCTAATTAAACTAAC	59.477	44.000	0.00	0.00	0.00	2.34
826	5423	6.290294	TCTCCACGCCTAATTAAACTAACT	57.710	37.500	0.00	0.00	0.00	2.24
827	5424	7.408756	TCTCCACGCCTAATTAAACTAACTA	57.591	36.000	0.00	0.00	0.00	2.24
828	5425	7.839907	TCTCCACGCCTAATTAAACTAACTAA	58.160	34.615	0.00	0.00	0.00	2.24
829	5426	7.761249	TCTCCACGCCTAATTAAACTAACTAAC	59.239	37.037	0.00	0.00	0.00	2.34
830	5427	7.614494	TCCACGCCTAATTAAACTAACTAACT	58.386	34.615	0.00	0.00	0.00	2.24
831	5428	8.748412	TCCACGCCTAATTAAACTAACTAACTA	58.252	33.333	0.00	0.00	0.00	2.24
832	5429	9.028185	CCACGCCTAATTAAACTAACTAACTAG	57.972	37.037	0.00	0.00	0.00	2.57
833	5430	8.538039	CACGCCTAATTAAACTAACTAACTAGC	58.462	37.037	0.00	0.00	0.00	3.42
834	5431	7.708322	ACGCCTAATTAAACTAACTAACTAGCC	59.292	37.037	0.00	0.00	0.00	3.93
835	5432	7.707893	CGCCTAATTAAACTAACTAACTAGCCA	59.292	37.037	0.00	0.00	0.00	4.75
836	5433	8.824781	GCCTAATTAAACTAACTAACTAGCCAC	58.175	37.037	0.00	0.00	0.00	5.01
837	5434	9.322773	CCTAATTAAACTAACTAACTAGCCACC	57.677	37.037	0.00	0.00	0.00	4.61
838	5435	9.880157	CTAATTAAACTAACTAACTAGCCACCA	57.120	33.333	0.00	0.00	0.00	4.17
840	5437	9.749340	AATTAAACTAACTAACTAGCCACCATT	57.251	29.630	0.00	0.00	0.00	3.16
841	5438	9.749340	ATTAAACTAACTAACTAGCCACCATTT	57.251	29.630	0.00	0.00	0.00	2.32
842	5439	7.683437	AAACTAACTAACTAGCCACCATTTC	57.317	36.000	0.00	0.00	0.00	2.17
843	5440	6.368779	ACTAACTAACTAGCCACCATTTCA	57.631	37.500	0.00	0.00	0.00	2.69
844	5441	6.171213	ACTAACTAACTAGCCACCATTTCAC	58.829	40.000	0.00	0.00	0.00	3.18
845	5442	3.951663	ACTAACTAGCCACCATTTCACC	58.048	45.455	0.00	0.00	0.00	4.02
846	5443	1.821216	AACTAGCCACCATTTCACCG	58.179	50.000	0.00	0.00	0.00	4.94
847	5444	0.676782	ACTAGCCACCATTTCACCGC	60.677	55.000	0.00	0.00	0.00	5.68
848	5445	1.705337	CTAGCCACCATTTCACCGCG	61.705	60.000	0.00	0.00	0.00	6.46
849	5446	2.457743	TAGCCACCATTTCACCGCGT	62.458	55.000	4.92	0.00	0.00	6.01
850	5447	2.560861	CCACCATTTCACCGCGTG	59.439	61.111	4.92	3.64	34.45	5.34
851	5448	2.126888	CACCATTTCACCGCGTGC	60.127	61.111	4.92	0.00	32.98	5.34
852	5449	3.361977	ACCATTTCACCGCGTGCC	61.362	61.111	4.92	0.00	32.98	5.01
853	5450	4.114997	CCATTTCACCGCGTGCCC	62.115	66.667	4.92	0.00	32.98	5.36
854	5451	3.055719	CATTTCACCGCGTGCCCT	61.056	61.111	4.92	0.00	32.98	5.19
855	5452	3.055719	ATTTCACCGCGTGCCCTG	61.056	61.111	4.92	0.00	32.98	4.45
856	5453	3.545124	ATTTCACCGCGTGCCCTGA	62.545	57.895	4.92	0.00	32.98	3.86
857	5454	2.819984	ATTTCACCGCGTGCCCTGAT	62.820	55.000	4.92	0.00	32.98	2.90
858	5455	3.950794	TTCACCGCGTGCCCTGATC	62.951	63.158	4.92	0.00	32.98	2.92
864	5461	3.197790	CGTGCCCTGATCGCCTTG	61.198	66.667	0.00	0.00	0.00	3.61
865	5462	3.512516	GTGCCCTGATCGCCTTGC	61.513	66.667	0.00	0.00	0.00	4.01
876	5473	2.351276	GCCTTGCGAGAGGGGAAA	59.649	61.111	1.22	0.00	37.29	3.13
877	5474	1.746991	GCCTTGCGAGAGGGGAAAG	60.747	63.158	1.22	0.00	37.29	2.62
878	5475	1.983224	CCTTGCGAGAGGGGAAAGA	59.017	57.895	1.22	0.00	32.94	2.52
879	5476	0.324943	CCTTGCGAGAGGGGAAAGAA	59.675	55.000	1.22	0.00	32.94	2.52
880	5477	1.271379	CCTTGCGAGAGGGGAAAGAAA	60.271	52.381	1.22	0.00	32.94	2.52
881	5478	2.504367	CTTGCGAGAGGGGAAAGAAAA	58.496	47.619	0.00	0.00	0.00	2.29
882	5479	2.185004	TGCGAGAGGGGAAAGAAAAG	57.815	50.000	0.00	0.00	0.00	2.27
883	5480	0.805614	GCGAGAGGGGAAAGAAAAGC	59.194	55.000	0.00	0.00	0.00	3.51
884	5481	1.611936	GCGAGAGGGGAAAGAAAAGCT	60.612	52.381	0.00	0.00	0.00	3.74
885	5482	2.784347	CGAGAGGGGAAAGAAAAGCTT	58.216	47.619	0.00	0.00	38.88	3.74
925	5522	7.992180	AAAACTTTTAGTCTCATTGCTTGTG	57.008	32.000	0.00	0.00	0.00	3.33
926	5523	6.942532	AACTTTTAGTCTCATTGCTTGTGA	57.057	33.333	0.00	0.00	0.00	3.58
927	5524	6.305693	ACTTTTAGTCTCATTGCTTGTGAC	57.694	37.500	11.87	11.87	45.16	3.67
930	5527	0.798776	GTCTCATTGCTTGTGACGGG	59.201	55.000	6.66	0.00	38.61	5.28
932	5529	1.926511	CTCATTGCTTGTGACGGGCC	61.927	60.000	0.00	0.00	0.00	5.80
934	5531	1.530419	ATTGCTTGTGACGGGCCAA	60.530	52.632	4.39	0.00	0.00	4.52
935	5532	0.899717	ATTGCTTGTGACGGGCCAAT	60.900	50.000	4.39	0.00	0.00	3.16
937	5534	1.112315	TGCTTGTGACGGGCCAATTT	61.112	50.000	4.39	0.00	0.00	1.82
939	5536	1.135402	GCTTGTGACGGGCCAATTTAG	60.135	52.381	4.39	0.00	0.00	1.85
940	5537	2.432444	CTTGTGACGGGCCAATTTAGA	58.568	47.619	4.39	0.00	0.00	2.10
941	5538	2.570415	TGTGACGGGCCAATTTAGAA	57.430	45.000	4.39	0.00	0.00	2.10
997	5610	9.750125	AGAAGTTTGAGTGAATAATTGTTTTCC	57.250	29.630	0.00	0.00	0.00	3.13
998	5611	9.750125	GAAGTTTGAGTGAATAATTGTTTTCCT	57.250	29.630	0.00	0.00	0.00	3.36
1072	7838	2.238521	ACAAATGACCAACGCAGGATT	58.761	42.857	0.10	0.00	0.00	3.01
1073	7839	2.627699	ACAAATGACCAACGCAGGATTT	59.372	40.909	0.10	0.00	0.00	2.17
1074	7840	3.069443	ACAAATGACCAACGCAGGATTTT	59.931	39.130	0.10	0.00	0.00	1.82
1075	7841	4.057432	CAAATGACCAACGCAGGATTTTT	58.943	39.130	0.10	0.00	0.00	1.94
1108	7875	6.501453	AGAATCCAAATCCTCCAAAATTTCCA	59.499	34.615	0.00	0.00	0.00	3.53
1110	7877	6.298441	TCCAAATCCTCCAAAATTTCCATC	57.702	37.500	0.00	0.00	0.00	3.51
1137	7905	1.810755	CTTTGAACCGGCCCTAAGAAC	59.189	52.381	0.00	0.00	0.00	3.01
1150	7918	4.499188	GCCCTAAGAACTCAAACCAACAAC	60.499	45.833	0.00	0.00	0.00	3.32
1284	8073	0.881159	CGTTCCACGCCCTACAAACA	60.881	55.000	0.00	0.00	33.65	2.83
1295	8084	4.454504	CGCCCTACAAACAGACTAACAATT	59.545	41.667	0.00	0.00	0.00	2.32
1298	8087	6.569801	GCCCTACAAACAGACTAACAATTTCC	60.570	42.308	0.00	0.00	0.00	3.13
1299	8088	6.715264	CCCTACAAACAGACTAACAATTTCCT	59.285	38.462	0.00	0.00	0.00	3.36
1363	8584	6.238897	CGTTCTCATCTCAGCCTCTATTTAGT	60.239	42.308	0.00	0.00	0.00	2.24
1364	8585	6.892658	TCTCATCTCAGCCTCTATTTAGTC	57.107	41.667	0.00	0.00	0.00	2.59
1377	8598	5.507637	TCTATTTAGTCTCTTCCACTCCGT	58.492	41.667	0.00	0.00	0.00	4.69
1405	8626	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1406	8627	0.871722	ACACACACACACACACACAC	59.128	50.000	0.00	0.00	0.00	3.82
1407	8628	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1408	8629	0.871722	ACACACACACACACACACAC	59.128	50.000	0.00	0.00	0.00	3.82
1409	8630	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1410	8631	0.871722	ACACACACACACACACACAC	59.128	50.000	0.00	0.00	0.00	3.82
1411	8632	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1412	8633	0.871722	ACACACACACACACACACAC	59.128	50.000	0.00	0.00	0.00	3.82
1413	8634	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1414	8635	0.871722	ACACACACACACACACACAC	59.128	50.000	0.00	0.00	0.00	3.82
1415	8636	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1416	8637	0.871722	ACACACACACACACACACAC	59.128	50.000	0.00	0.00	0.00	3.82
1417	8638	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1418	8639	0.871722	ACACACACACACACACACAC	59.128	50.000	0.00	0.00	0.00	3.82
1419	8640	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1420	8641	0.871722	ACACACACACACACACACAC	59.128	50.000	0.00	0.00	0.00	3.82
1421	8642	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1422	8643	0.871722	ACACACACACACACACACAC	59.128	50.000	0.00	0.00	0.00	3.82
1429	8650	0.871057	CACACACACACACACACACA	59.129	50.000	0.00	0.00	0.00	3.72
1446	8667	0.612229	ACACAGCTCCATGTCTCCTG	59.388	55.000	0.00	0.00	0.00	3.86
1464	8686	4.148825	AGCTCACCGCCGATCACC	62.149	66.667	0.00	0.00	40.39	4.02
1491	8721	4.717629	CTGAGTTGCGCCGACCGA	62.718	66.667	4.18	0.00	40.02	4.69
1500	8730	0.935196	GCGCCGACCGAAAAAGATAT	59.065	50.000	0.00	0.00	40.02	1.63
2072	9336	4.901123	CGTGTGTGCGGACCCACA	62.901	66.667	21.11	9.68	42.99	4.17
2208	9472	1.797635	GAAGATGAGCCGCTAATGAGC	59.202	52.381	0.00	0.00	46.00	4.26
2233	9497	2.499205	CGGTGCCAGCTTCCGATA	59.501	61.111	17.19	0.00	46.05	2.92
2394	9658	0.908910	TGGTGGACAAGATGCCGTAT	59.091	50.000	0.00	0.00	0.00	3.06
2526	9790	1.475403	TCTTCGAGTGGGATCAGACC	58.525	55.000	0.00	0.00	0.00	3.85
2616	9880	2.021068	CTCCCGATGCCGATGTGTCT	62.021	60.000	0.00	0.00	38.22	3.41
3228	10492	2.338015	CCTTCTCCCGTCCGACGAA	61.338	63.158	22.40	7.49	46.05	3.85
3237	10501	0.317103	CGTCCGACGAAGCTATGAGG	60.317	60.000	16.03	0.00	46.05	3.86
3246	10510	2.093447	CGAAGCTATGAGGAAAGTGGGT	60.093	50.000	0.00	0.00	0.00	4.51
3249	10513	4.489306	AGCTATGAGGAAAGTGGGTAAC	57.511	45.455	0.00	0.00	0.00	2.50
3745	11009	1.683943	GCTAATCTTGATGCTGCCCA	58.316	50.000	0.00	0.00	0.00	5.36
3872	11136	3.461773	CCACCTGCGTCCGATCCT	61.462	66.667	0.00	0.00	0.00	3.24
3936	11200	3.749064	GTCGCTCACCTGGCTCGA	61.749	66.667	0.00	0.00	0.00	4.04
3978	11242	2.280119	GCGGCGATGTGGATGCTA	60.280	61.111	12.98	0.00	0.00	3.49
4322	11586	1.074319	TTTGACACGATACCGAGCGC	61.074	55.000	0.00	0.00	38.26	5.92
4325	11589	2.277692	CACGATACCGAGCGCGAA	60.278	61.111	12.10	0.00	38.26	4.70
4327	11591	2.326897	CGATACCGAGCGCGAAGA	59.673	61.111	12.10	0.00	40.82	2.87
4530	11794	2.362889	CCCATGAAGGTGGTGGCC	60.363	66.667	0.00	0.00	37.57	5.36
4626	11890	1.144936	GCGGCTGCCTTCTATGTCT	59.855	57.895	17.92	0.00	33.98	3.41
4707	11991	5.470098	CAGTTCCAGTTGCAGTTTGTAGTAT	59.530	40.000	0.00	0.00	0.00	2.12
4721	12005	6.592994	AGTTTGTAGTATTAGCTCGTTTTCCC	59.407	38.462	0.00	0.00	0.00	3.97
4726	12010	6.496338	AGTATTAGCTCGTTTTCCCTTTTG	57.504	37.500	0.00	0.00	0.00	2.44
4765	12298	9.986833	GTAGTACTTAGCTAGTAAAGAACACTC	57.013	37.037	0.00	4.90	40.93	3.51
4826	12379	6.497437	TGATTCTTGTGTCAAGATTTGTGTG	58.503	36.000	12.02	0.00	0.00	3.82
4840	12737	7.656707	AGATTTGTGTGGTTTATTTTCATGC	57.343	32.000	0.00	0.00	0.00	4.06
4856	12753	4.566545	TCATGCGTTGTTTCATGACTTT	57.433	36.364	0.00	0.00	42.72	2.66
4894	12976	2.445525	ACTTGCCTCTCTTTGGGGTAAA	59.554	45.455	0.00	0.00	0.00	2.01
4897	12979	2.289565	GCCTCTCTTTGGGGTAAATCG	58.710	52.381	0.00	0.00	0.00	3.34
4907	12989	7.599171	TCTTTGGGGTAAATCGATTTTCTTTC	58.401	34.615	27.10	15.25	0.00	2.62
4930	13013	2.037901	TGGCTGGATTTTTGACTTGCA	58.962	42.857	0.00	0.00	0.00	4.08
4941	13024	0.257328	TGACTTGCACCTGTTTGGGA	59.743	50.000	0.00	0.00	41.11	4.37
4953	13036	4.941873	ACCTGTTTGGGATAAGTCGAATTC	59.058	41.667	0.00	0.00	41.11	2.17
5011	13095	2.001872	GCCAAATTTTCGATTGGGCAG	58.998	47.619	15.48	0.00	45.03	4.85
5015	13099	4.157656	CCAAATTTTCGATTGGGCAGTAGA	59.842	41.667	7.51	0.00	41.93	2.59
5016	13100	5.163519	CCAAATTTTCGATTGGGCAGTAGAT	60.164	40.000	7.51	0.00	41.93	1.98
5018	13102	2.910688	TTCGATTGGGCAGTAGATCC	57.089	50.000	0.00	0.00	0.00	3.36
5021	13105	2.705658	TCGATTGGGCAGTAGATCCATT	59.294	45.455	0.00	0.00	0.00	3.16
5022	13106	3.901222	TCGATTGGGCAGTAGATCCATTA	59.099	43.478	0.00	0.00	0.00	1.90
5027	13111	6.702449	TTGGGCAGTAGATCCATTATACAT	57.298	37.500	0.00	0.00	0.00	2.29
5052	13136	7.830940	ATTGCATATGTTTATGTTTGTGTGG	57.169	32.000	4.29	0.00	37.99	4.17
5053	13137	5.718146	TGCATATGTTTATGTTTGTGTGGG	58.282	37.500	4.29	0.00	37.99	4.61
5121	13205	3.630168	ACATGGGTATGTTATGCAGCAA	58.370	40.909	0.00	0.00	45.01	3.91
5135	13219	4.443913	TGCAGCAATTCTACTGTACGTA	57.556	40.909	0.00	0.00	36.26	3.57
5155	13239	4.430118	CGTATGTCGCGTGAAAATTCATTC	59.570	41.667	5.77	0.00	39.73	2.67
5159	13243	3.070748	TCGCGTGAAAATTCATTCTGGA	58.929	40.909	5.77	0.00	39.73	3.86
5163	13247	5.452302	CGCGTGAAAATTCATTCTGGATTAC	59.548	40.000	0.00	0.00	39.73	1.89
5207	13292	3.366070	CCTGCTTTGAGATTTGTGCTCTG	60.366	47.826	0.00	0.00	33.57	3.35
5214	13302	3.251729	TGAGATTTGTGCTCTGTTTCTGC	59.748	43.478	0.00	0.00	33.57	4.26
5216	13304	4.645535	AGATTTGTGCTCTGTTTCTGCTA	58.354	39.130	0.00	0.00	0.00	3.49
5221	13309	4.893608	TGTGCTCTGTTTCTGCTATGTTA	58.106	39.130	0.00	0.00	0.00	2.41
5272	13361	1.609208	ATCGCATATTTGGGCCTGTC	58.391	50.000	4.53	0.00	35.84	3.51
5286	13375	3.131046	GGGCCTGTCAATTCCTTAACATG	59.869	47.826	0.84	0.00	0.00	3.21
5294	13383	4.100529	CAATTCCTTAACATGCTGAAGCG	58.899	43.478	0.00	0.00	45.83	4.68
5306	13395	1.159285	CTGAAGCGCATTTCCTGTGA	58.841	50.000	11.47	0.00	37.57	3.58
5313	13402	2.799412	GCGCATTTCCTGTGAGATCTAG	59.201	50.000	0.30	0.00	37.57	2.43
5325	13414	3.056832	TGAGATCTAGCCCTCCACTCTA	58.943	50.000	0.00	0.00	0.00	2.43
5476	13566	8.665175	CAGAAGTTGCAATATTGTTTGACTAG	57.335	34.615	16.61	0.00	0.00	2.57
5479	13569	7.145932	AGTTGCAATATTGTTTGACTAGTCC	57.854	36.000	20.11	5.58	0.00	3.85
5505	13595	7.959689	TGCATACTACAAAAATGTGCAATTT	57.040	28.000	0.00	0.00	38.07	1.82
5527	13617	1.926510	GGTGCAAAGTTGTGTTGAAGC	59.073	47.619	0.00	0.00	0.00	3.86
5528	13618	2.417243	GGTGCAAAGTTGTGTTGAAGCT	60.417	45.455	0.00	0.00	30.66	3.74
5536	13626	7.435192	GCAAAGTTGTGTTGAAGCTTTTATAGT	59.565	33.333	0.00	0.00	0.00	2.12
5661	13753	8.700439	TCTTTAAGGGTAATATTAATGCCACC	57.300	34.615	0.00	2.26	0.00	4.61
5674	13766	4.476628	AATGCCACCAATTCATTCCTTC	57.523	40.909	0.00	0.00	0.00	3.46
5680	13772	5.264395	CCACCAATTCATTCCTTCTTAGGT	58.736	41.667	0.00	0.00	42.60	3.08
5684	13777	7.814587	CACCAATTCATTCCTTCTTAGGTTTTC	59.185	37.037	0.00	0.00	42.60	2.29
5689	13782	8.533569	TTCATTCCTTCTTAGGTTTTCTTTGT	57.466	30.769	0.00	0.00	42.60	2.83
5733	13826	8.309163	TGCTTCTTGTTGCATATTTTAAAAGG	57.691	30.769	6.79	0.33	33.94	3.11
5734	13827	7.095271	TGCTTCTTGTTGCATATTTTAAAAGGC	60.095	33.333	6.79	10.21	33.94	4.35
5735	13828	7.095271	GCTTCTTGTTGCATATTTTAAAAGGCA	60.095	33.333	16.24	16.24	0.00	4.75
5736	13829	7.650834	TCTTGTTGCATATTTTAAAAGGCAC	57.349	32.000	18.59	15.02	0.00	5.01
5737	13830	7.212976	TCTTGTTGCATATTTTAAAAGGCACA	58.787	30.769	18.59	16.59	0.00	4.57
5738	13831	7.712639	TCTTGTTGCATATTTTAAAAGGCACAA	59.287	29.630	18.59	20.24	0.00	3.33
5739	13832	7.183580	TGTTGCATATTTTAAAAGGCACAAC	57.816	32.000	21.10	21.10	35.45	3.32
5740	13833	6.989169	TGTTGCATATTTTAAAAGGCACAACT	59.011	30.769	24.55	6.49	35.79	3.16
5741	13834	8.144478	TGTTGCATATTTTAAAAGGCACAACTA	58.856	29.630	24.55	15.86	35.79	2.24
5742	13835	9.150348	GTTGCATATTTTAAAAGGCACAACTAT	57.850	29.630	18.59	3.41	32.91	2.12
5743	13836	9.717942	TTGCATATTTTAAAAGGCACAACTATT	57.282	25.926	18.59	0.00	0.00	1.73
5744	13837	9.717942	TGCATATTTTAAAAGGCACAACTATTT	57.282	25.926	16.24	0.00	0.00	1.40
5745	13838	9.971744	GCATATTTTAAAAGGCACAACTATTTG	57.028	29.630	6.79	0.00	38.83	2.32
5755	13848	9.638239	AAAGGCACAACTATTTGTTATTATGTG	57.362	29.630	0.00	0.00	43.89	3.21
5756	13849	7.257722	AGGCACAACTATTTGTTATTATGTGC	58.742	34.615	16.68	16.68	43.89	4.57
5757	13850	7.032580	GGCACAACTATTTGTTATTATGTGCA	58.967	34.615	23.59	0.00	46.40	4.57

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	4.465632	ACAGTATTGTAATCCAGCGTCA	57.534	40.909	0.00	0.00	35.25	4.35
1	2	5.109903	AGAACAGTATTGTAATCCAGCGTC	58.890	41.667	0.00	0.00	36.23	5.19
2	3	5.086104	AGAACAGTATTGTAATCCAGCGT	57.914	39.130	0.00	0.00	36.23	5.07
3	4	5.006746	GGAAGAACAGTATTGTAATCCAGCG	59.993	44.000	10.34	0.00	36.23	5.18
4	5	5.297029	GGGAAGAACAGTATTGTAATCCAGC	59.703	44.000	14.69	0.00	36.23	4.85
5	6	6.540189	CAGGGAAGAACAGTATTGTAATCCAG	59.460	42.308	14.69	6.74	36.23	3.86
6	7	6.214615	TCAGGGAAGAACAGTATTGTAATCCA	59.785	38.462	14.69	0.00	36.23	3.41
7	8	6.650120	TCAGGGAAGAACAGTATTGTAATCC	58.350	40.000	7.90	7.90	36.23	3.01
8	9	7.556844	TCTCAGGGAAGAACAGTATTGTAATC	58.443	38.462	0.00	0.00	36.23	1.75
9	10	7.400339	TCTCTCAGGGAAGAACAGTATTGTAAT	59.600	37.037	0.00	0.00	36.23	1.89
10	11	6.724441	TCTCTCAGGGAAGAACAGTATTGTAA	59.276	38.462	0.00	0.00	36.23	2.41
11	12	6.253758	TCTCTCAGGGAAGAACAGTATTGTA	58.746	40.000	0.00	0.00	36.23	2.41
12	13	5.087323	TCTCTCAGGGAAGAACAGTATTGT	58.913	41.667	0.00	0.00	39.87	2.71
13	14	5.667539	TCTCTCAGGGAAGAACAGTATTG	57.332	43.478	0.00	0.00	0.00	1.90
14	15	6.325286	GGTATCTCTCAGGGAAGAACAGTATT	59.675	42.308	0.00	0.00	0.00	1.89
15	16	5.836358	GGTATCTCTCAGGGAAGAACAGTAT	59.164	44.000	0.00	0.00	0.00	2.12
16	17	5.044030	AGGTATCTCTCAGGGAAGAACAGTA	60.044	44.000	0.00	0.00	0.00	2.74
17	18	4.027437	GGTATCTCTCAGGGAAGAACAGT	58.973	47.826	0.00	0.00	0.00	3.55
18	19	4.099266	CAGGTATCTCTCAGGGAAGAACAG	59.901	50.000	0.00	0.00	0.00	3.16
19	20	4.026744	CAGGTATCTCTCAGGGAAGAACA	58.973	47.826	0.00	0.00	0.00	3.18
20	21	3.386402	CCAGGTATCTCTCAGGGAAGAAC	59.614	52.174	0.00	0.00	0.00	3.01
21	22	3.647636	CCAGGTATCTCTCAGGGAAGAA	58.352	50.000	0.00	0.00	0.00	2.52
22	23	2.691241	GCCAGGTATCTCTCAGGGAAGA	60.691	54.545	0.00	0.00	0.00	2.87
23	24	1.691434	GCCAGGTATCTCTCAGGGAAG	59.309	57.143	0.00	0.00	0.00	3.46
24	25	1.794714	GCCAGGTATCTCTCAGGGAA	58.205	55.000	0.00	0.00	0.00	3.97
25	26	0.468214	CGCCAGGTATCTCTCAGGGA	60.468	60.000	0.00	0.00	0.00	4.20
26	27	2.045280	CGCCAGGTATCTCTCAGGG	58.955	63.158	0.00	0.00	0.00	4.45
27	28	1.112315	AGCGCCAGGTATCTCTCAGG	61.112	60.000	2.29	0.00	0.00	3.86
28	29	0.749649	AAGCGCCAGGTATCTCTCAG	59.250	55.000	2.29	0.00	0.00	3.35
29	30	0.747255	GAAGCGCCAGGTATCTCTCA	59.253	55.000	2.29	0.00	0.00	3.27
30	31	0.747255	TGAAGCGCCAGGTATCTCTC	59.253	55.000	2.29	0.00	0.00	3.20
31	32	0.749649	CTGAAGCGCCAGGTATCTCT	59.250	55.000	2.29	0.00	0.00	3.10
32	33	0.249657	CCTGAAGCGCCAGGTATCTC	60.250	60.000	20.84	0.13	46.62	2.75
33	34	1.826024	CCTGAAGCGCCAGGTATCT	59.174	57.895	20.84	0.00	46.62	1.98
34	35	4.445699	CCTGAAGCGCCAGGTATC	57.554	61.111	20.84	4.62	46.62	2.24
39	40	0.247736	AACTAGACCTGAAGCGCCAG	59.752	55.000	2.29	5.03	0.00	4.85
40	41	0.037326	CAACTAGACCTGAAGCGCCA	60.037	55.000	2.29	0.00	0.00	5.69
41	42	0.741221	CCAACTAGACCTGAAGCGCC	60.741	60.000	2.29	0.00	0.00	6.53
42	43	0.037232	ACCAACTAGACCTGAAGCGC	60.037	55.000	0.00	0.00	0.00	5.92
43	44	1.272490	TCACCAACTAGACCTGAAGCG	59.728	52.381	0.00	0.00	0.00	4.68
44	45	3.402628	TTCACCAACTAGACCTGAAGC	57.597	47.619	0.00	0.00	0.00	3.86
45	46	4.692625	CACATTCACCAACTAGACCTGAAG	59.307	45.833	0.00	0.00	0.00	3.02
46	47	4.102524	ACACATTCACCAACTAGACCTGAA	59.897	41.667	0.00	0.00	0.00	3.02
47	48	3.646162	ACACATTCACCAACTAGACCTGA	59.354	43.478	0.00	0.00	0.00	3.86
48	49	3.748048	CACACATTCACCAACTAGACCTG	59.252	47.826	0.00	0.00	0.00	4.00
49	50	3.391296	ACACACATTCACCAACTAGACCT	59.609	43.478	0.00	0.00	0.00	3.85
50	51	3.740115	ACACACATTCACCAACTAGACC	58.260	45.455	0.00	0.00	0.00	3.85
51	52	4.554723	GCAACACACATTCACCAACTAGAC	60.555	45.833	0.00	0.00	0.00	2.59
52	53	3.563808	GCAACACACATTCACCAACTAGA	59.436	43.478	0.00	0.00	0.00	2.43
53	54	3.565482	AGCAACACACATTCACCAACTAG	59.435	43.478	0.00	0.00	0.00	2.57
54	55	3.550820	AGCAACACACATTCACCAACTA	58.449	40.909	0.00	0.00	0.00	2.24
55	56	2.378038	AGCAACACACATTCACCAACT	58.622	42.857	0.00	0.00	0.00	3.16
56	57	2.869233	AGCAACACACATTCACCAAC	57.131	45.000	0.00	0.00	0.00	3.77
57	58	3.519579	CAAAGCAACACACATTCACCAA	58.480	40.909	0.00	0.00	0.00	3.67
58	59	2.738000	GCAAAGCAACACACATTCACCA	60.738	45.455	0.00	0.00	0.00	4.17
59	60	1.860326	GCAAAGCAACACACATTCACC	59.140	47.619	0.00	0.00	0.00	4.02
60	61	2.538437	TGCAAAGCAACACACATTCAC	58.462	42.857	0.00	0.00	34.76	3.18
61	62	2.955477	TGCAAAGCAACACACATTCA	57.045	40.000	0.00	0.00	34.76	2.57
64	65	2.293122	ACGTATGCAAAGCAACACACAT	59.707	40.909	0.00	0.00	43.62	3.21
89	91	0.792640	CTGCACATGACCGTCACTTC	59.207	55.000	2.57	0.00	0.00	3.01
107	109	3.687321	CTGCCGCCCACTATGCACT	62.687	63.158	0.00	0.00	0.00	4.40
108	110	3.204827	CTGCCGCCCACTATGCAC	61.205	66.667	0.00	0.00	0.00	4.57
109	111	4.488136	CCTGCCGCCCACTATGCA	62.488	66.667	0.00	0.00	0.00	3.96
110	112	3.482232	ATCCTGCCGCCCACTATGC	62.482	63.158	0.00	0.00	0.00	3.14
111	113	1.598962	CATCCTGCCGCCCACTATG	60.599	63.158	0.00	0.00	0.00	2.23
320	366	9.698309	CCCCTTCTTTATCTTTTTCTTTTTCTC	57.302	33.333	0.00	0.00	0.00	2.87
399	994	4.530553	TCATCTCCTAGGTGCACACTTTAA	59.469	41.667	20.43	0.00	0.00	1.52
400	995	4.093743	TCATCTCCTAGGTGCACACTTTA	58.906	43.478	20.43	4.43	0.00	1.85
401	996	2.906389	TCATCTCCTAGGTGCACACTTT	59.094	45.455	20.43	3.39	0.00	2.66
402	997	2.540383	TCATCTCCTAGGTGCACACTT	58.460	47.619	20.43	6.07	0.00	3.16
435	1033	1.645034	ATCATTCTTCGTCACTGGCG	58.355	50.000	0.00	0.00	0.00	5.69
444	1042	9.360093	ACACTCTAGTTTTCTAATCATTCTTCG	57.640	33.333	0.00	0.00	31.45	3.79
449	1047	8.621532	TGCAACACTCTAGTTTTCTAATCATT	57.378	30.769	0.00	0.00	31.45	2.57
489	5039	4.023193	CCGCTGAAACCACTTTGTAGAATT	60.023	41.667	0.00	0.00	0.00	2.17
491	5041	2.875933	CCGCTGAAACCACTTTGTAGAA	59.124	45.455	0.00	0.00	0.00	2.10
492	5042	2.103432	TCCGCTGAAACCACTTTGTAGA	59.897	45.455	0.00	0.00	0.00	2.59
493	5043	2.489971	TCCGCTGAAACCACTTTGTAG	58.510	47.619	0.00	0.00	0.00	2.74
495	5045	1.608590	CATCCGCTGAAACCACTTTGT	59.391	47.619	0.00	0.00	0.00	2.83
501	5052	0.400213	AGTTCCATCCGCTGAAACCA	59.600	50.000	0.00	0.00	0.00	3.67
507	5058	1.734465	GAAGACAAGTTCCATCCGCTG	59.266	52.381	0.00	0.00	0.00	5.18
508	5059	1.347707	TGAAGACAAGTTCCATCCGCT	59.652	47.619	0.00	0.00	0.00	5.52
510	5061	4.829064	TTTTGAAGACAAGTTCCATCCG	57.171	40.909	0.00	0.00	37.32	4.18
549	5114	7.383572	CGTTGTTTGATTTGTGGGATTGAAATA	59.616	33.333	0.00	0.00	0.00	1.40
551	5116	5.521735	CGTTGTTTGATTTGTGGGATTGAAA	59.478	36.000	0.00	0.00	0.00	2.69
563	5128	2.948979	TCCTGTGCTCGTTGTTTGATTT	59.051	40.909	0.00	0.00	0.00	2.17
572	5137	1.947456	GGAGTTTTTCCTGTGCTCGTT	59.053	47.619	0.00	0.00	43.16	3.85
589	5154	3.142174	GGCCGATTTCAATCCTAAGGAG	58.858	50.000	0.00	0.00	34.05	3.69
594	5159	5.930837	AATTTTGGCCGATTTCAATCCTA	57.069	34.783	0.00	0.00	31.68	2.94
600	5165	4.038522	TCACAGAAATTTTGGCCGATTTCA	59.961	37.500	27.06	13.28	42.12	2.69
601	5166	4.555262	TCACAGAAATTTTGGCCGATTTC	58.445	39.130	21.99	21.99	40.73	2.17
603	5168	4.599047	TTCACAGAAATTTTGGCCGATT	57.401	36.364	0.00	0.00	0.00	3.34
604	5169	4.599047	TTTCACAGAAATTTTGGCCGAT	57.401	36.364	0.00	0.00	0.00	4.18
607	5172	5.308014	AGGAATTTCACAGAAATTTTGGCC	58.692	37.500	16.20	13.02	30.68	5.36
608	5173	6.866010	AAGGAATTTCACAGAAATTTTGGC	57.134	33.333	16.20	6.25	30.68	4.52
617	5193	4.750098	GTCGAGTCAAAGGAATTTCACAGA	59.250	41.667	0.00	0.00	0.00	3.41
620	5196	3.188667	GGGTCGAGTCAAAGGAATTTCAC	59.811	47.826	0.00	0.00	0.00	3.18
621	5197	3.072476	AGGGTCGAGTCAAAGGAATTTCA	59.928	43.478	0.00	0.00	0.00	2.69
623	5199	3.790089	AGGGTCGAGTCAAAGGAATTT	57.210	42.857	0.00	0.00	0.00	1.82
625	5201	4.094476	TCTTAGGGTCGAGTCAAAGGAAT	58.906	43.478	0.00	0.00	0.00	3.01
626	5202	3.503365	TCTTAGGGTCGAGTCAAAGGAA	58.497	45.455	0.00	0.00	0.00	3.36
628	5204	3.955650	TTCTTAGGGTCGAGTCAAAGG	57.044	47.619	0.00	0.00	0.00	3.11
629	5205	4.563184	CGAATTCTTAGGGTCGAGTCAAAG	59.437	45.833	3.52	0.00	35.54	2.77
630	5206	4.219070	TCGAATTCTTAGGGTCGAGTCAAA	59.781	41.667	3.52	0.00	37.58	2.69
632	5208	3.349927	TCGAATTCTTAGGGTCGAGTCA	58.650	45.455	3.52	0.00	37.58	3.41
633	5209	4.104066	GTTCGAATTCTTAGGGTCGAGTC	58.896	47.826	0.00	0.00	42.83	3.36
634	5210	3.119209	GGTTCGAATTCTTAGGGTCGAGT	60.119	47.826	0.00	0.00	42.83	4.18
635	5211	3.119245	TGGTTCGAATTCTTAGGGTCGAG	60.119	47.826	0.00	0.00	42.83	4.04
637	5213	3.187700	CTGGTTCGAATTCTTAGGGTCG	58.812	50.000	0.00	0.00	34.85	4.79
638	5214	2.937149	GCTGGTTCGAATTCTTAGGGTC	59.063	50.000	0.00	0.00	0.00	4.46
640	5216	2.985896	TGCTGGTTCGAATTCTTAGGG	58.014	47.619	0.00	0.00	0.00	3.53
641	5217	5.371115	TTTTGCTGGTTCGAATTCTTAGG	57.629	39.130	0.00	0.00	0.00	2.69
642	5218	5.048713	ACCTTTTGCTGGTTCGAATTCTTAG	60.049	40.000	0.00	0.00	33.34	2.18
643	5219	4.825085	ACCTTTTGCTGGTTCGAATTCTTA	59.175	37.500	0.00	0.00	33.34	2.10
644	5220	3.636764	ACCTTTTGCTGGTTCGAATTCTT	59.363	39.130	0.00	0.00	33.34	2.52
646	5222	3.243401	ACACCTTTTGCTGGTTCGAATTC	60.243	43.478	0.00	0.00	35.28	2.17
647	5223	2.693074	ACACCTTTTGCTGGTTCGAATT	59.307	40.909	0.00	0.00	35.28	2.17
652	5249	5.880332	TCAGATATACACCTTTTGCTGGTTC	59.120	40.000	0.00	0.00	35.28	3.62
655	5252	6.016777	GGAATCAGATATACACCTTTTGCTGG	60.017	42.308	0.00	0.00	0.00	4.85
656	5253	6.543465	TGGAATCAGATATACACCTTTTGCTG	59.457	38.462	0.00	0.00	0.00	4.41
657	5254	6.662755	TGGAATCAGATATACACCTTTTGCT	58.337	36.000	0.00	0.00	0.00	3.91
661	5258	6.605119	CCCTTGGAATCAGATATACACCTTT	58.395	40.000	0.00	0.00	0.00	3.11
666	5263	5.848286	ATGCCCTTGGAATCAGATATACA	57.152	39.130	0.00	0.00	0.00	2.29
667	5264	8.814038	ATTTATGCCCTTGGAATCAGATATAC	57.186	34.615	0.00	0.00	0.00	1.47
668	5265	9.905713	GTATTTATGCCCTTGGAATCAGATATA	57.094	33.333	0.00	0.00	0.00	0.86
670	5267	7.988937	AGTATTTATGCCCTTGGAATCAGATA	58.011	34.615	0.00	0.00	0.00	1.98
680	5277	5.533903	AGATGAGCAAGTATTTATGCCCTTG	59.466	40.000	0.00	0.00	43.57	3.61
681	5278	5.699143	AGATGAGCAAGTATTTATGCCCTT	58.301	37.500	0.00	0.00	43.57	3.95
683	5280	7.391554	TGAATAGATGAGCAAGTATTTATGCCC	59.608	37.037	0.00	0.00	43.57	5.36
685	5282	8.777413	TGTGAATAGATGAGCAAGTATTTATGC	58.223	33.333	0.00	0.00	42.87	3.14
689	5286	8.133627	GCATTGTGAATAGATGAGCAAGTATTT	58.866	33.333	0.00	0.00	0.00	1.40
690	5287	7.501559	AGCATTGTGAATAGATGAGCAAGTATT	59.498	33.333	0.00	0.00	0.00	1.89
692	5289	6.351711	AGCATTGTGAATAGATGAGCAAGTA	58.648	36.000	0.00	0.00	0.00	2.24
694	5291	5.277876	GGAGCATTGTGAATAGATGAGCAAG	60.278	44.000	0.00	0.00	0.00	4.01
696	5293	4.132336	GGAGCATTGTGAATAGATGAGCA	58.868	43.478	0.00	0.00	0.00	4.26
697	5294	4.024218	GTGGAGCATTGTGAATAGATGAGC	60.024	45.833	0.00	0.00	0.00	4.26
698	5295	5.366460	AGTGGAGCATTGTGAATAGATGAG	58.634	41.667	0.00	0.00	0.00	2.90
699	5296	5.363562	AGTGGAGCATTGTGAATAGATGA	57.636	39.130	0.00	0.00	0.00	2.92
700	5297	6.446781	AAAGTGGAGCATTGTGAATAGATG	57.553	37.500	0.00	0.00	0.00	2.90
702	5299	6.003326	TGAAAAGTGGAGCATTGTGAATAGA	58.997	36.000	0.00	0.00	0.00	1.98
703	5300	6.258230	TGAAAAGTGGAGCATTGTGAATAG	57.742	37.500	0.00	0.00	0.00	1.73
704	5301	6.647334	TTGAAAAGTGGAGCATTGTGAATA	57.353	33.333	0.00	0.00	0.00	1.75
706	5303	4.998671	TTGAAAAGTGGAGCATTGTGAA	57.001	36.364	0.00	0.00	0.00	3.18
707	5304	4.998671	TTTGAAAAGTGGAGCATTGTGA	57.001	36.364	0.00	0.00	0.00	3.58
708	5305	5.051816	ACATTTGAAAAGTGGAGCATTGTG	58.948	37.500	0.00	0.00	37.94	3.33
709	5306	5.280654	ACATTTGAAAAGTGGAGCATTGT	57.719	34.783	0.00	0.00	37.94	2.71
710	5307	5.178067	GGAACATTTGAAAAGTGGAGCATTG	59.822	40.000	0.00	0.00	37.94	2.82
711	5308	5.070847	AGGAACATTTGAAAAGTGGAGCATT	59.929	36.000	0.00	0.00	37.94	3.56
712	5309	4.590222	AGGAACATTTGAAAAGTGGAGCAT	59.410	37.500	0.00	0.00	37.94	3.79
713	5310	3.960102	AGGAACATTTGAAAAGTGGAGCA	59.040	39.130	0.00	0.00	37.94	4.26
714	5311	4.301628	CAGGAACATTTGAAAAGTGGAGC	58.698	43.478	0.00	0.00	37.94	4.70
715	5312	4.202141	TGCAGGAACATTTGAAAAGTGGAG	60.202	41.667	0.00	0.00	37.94	3.86
716	5313	3.703556	TGCAGGAACATTTGAAAAGTGGA	59.296	39.130	0.00	0.00	37.94	4.02
717	5314	4.053295	CTGCAGGAACATTTGAAAAGTGG	58.947	43.478	5.57	0.00	37.94	4.00
718	5315	4.935702	TCTGCAGGAACATTTGAAAAGTG	58.064	39.130	15.13	0.00	39.72	3.16
719	5316	5.535333	CATCTGCAGGAACATTTGAAAAGT	58.465	37.500	15.13	0.00	0.00	2.66
720	5317	4.387862	GCATCTGCAGGAACATTTGAAAAG	59.612	41.667	15.13	0.00	41.59	2.27
721	5318	4.039488	AGCATCTGCAGGAACATTTGAAAA	59.961	37.500	15.13	0.00	45.16	2.29
722	5319	3.575256	AGCATCTGCAGGAACATTTGAAA	59.425	39.130	15.13	0.00	45.16	2.69
723	5320	3.159472	AGCATCTGCAGGAACATTTGAA	58.841	40.909	15.13	0.00	45.16	2.69
724	5321	2.799017	AGCATCTGCAGGAACATTTGA	58.201	42.857	15.13	0.00	45.16	2.69
725	5322	3.250744	CAAGCATCTGCAGGAACATTTG	58.749	45.455	15.13	7.87	45.16	2.32
726	5323	2.353406	GCAAGCATCTGCAGGAACATTT	60.353	45.455	15.13	0.00	45.16	2.32
727	5324	1.203994	GCAAGCATCTGCAGGAACATT	59.796	47.619	15.13	0.03	45.16	2.71
728	5325	0.815734	GCAAGCATCTGCAGGAACAT	59.184	50.000	15.13	0.00	45.16	2.71
729	5326	2.260247	GCAAGCATCTGCAGGAACA	58.740	52.632	15.13	0.00	45.16	3.18
736	5333	1.069022	TCTTCGTTTGCAAGCATCTGC	60.069	47.619	13.97	0.00	42.95	4.26
737	5334	2.975410	TCTTCGTTTGCAAGCATCTG	57.025	45.000	13.97	0.00	0.00	2.90
738	5335	4.437930	GCTTATCTTCGTTTGCAAGCATCT	60.438	41.667	13.97	0.00	38.55	2.90
739	5336	3.788163	GCTTATCTTCGTTTGCAAGCATC	59.212	43.478	13.97	0.00	38.55	3.91
740	5337	3.191162	TGCTTATCTTCGTTTGCAAGCAT	59.809	39.130	13.97	1.87	42.35	3.79
741	5338	2.551887	TGCTTATCTTCGTTTGCAAGCA	59.448	40.909	13.97	6.20	44.30	3.91
742	5339	2.911102	GTGCTTATCTTCGTTTGCAAGC	59.089	45.455	2.75	2.75	39.02	4.01
743	5340	3.189287	AGGTGCTTATCTTCGTTTGCAAG	59.811	43.478	0.00	0.00	32.10	4.01
744	5341	3.146066	AGGTGCTTATCTTCGTTTGCAA	58.854	40.909	0.00	0.00	32.10	4.08
745	5342	2.778299	AGGTGCTTATCTTCGTTTGCA	58.222	42.857	0.00	0.00	0.00	4.08
746	5343	3.831715	AAGGTGCTTATCTTCGTTTGC	57.168	42.857	0.00	0.00	0.00	3.68
747	5344	6.967199	GGAATAAAGGTGCTTATCTTCGTTTG	59.033	38.462	0.00	0.00	0.00	2.93
748	5345	6.657541	TGGAATAAAGGTGCTTATCTTCGTTT	59.342	34.615	0.00	0.00	0.00	3.60
749	5346	6.093633	GTGGAATAAAGGTGCTTATCTTCGTT	59.906	38.462	0.00	0.00	0.00	3.85
750	5347	5.585047	GTGGAATAAAGGTGCTTATCTTCGT	59.415	40.000	0.00	0.00	0.00	3.85
751	5348	5.276868	CGTGGAATAAAGGTGCTTATCTTCG	60.277	44.000	0.00	0.00	0.00	3.79
752	5349	5.504173	GCGTGGAATAAAGGTGCTTATCTTC	60.504	44.000	0.00	0.00	0.00	2.87
753	5350	4.335594	GCGTGGAATAAAGGTGCTTATCTT	59.664	41.667	0.00	0.00	0.00	2.40
754	5351	3.877508	GCGTGGAATAAAGGTGCTTATCT	59.122	43.478	0.00	0.00	0.00	1.98
755	5352	3.003378	GGCGTGGAATAAAGGTGCTTATC	59.997	47.826	0.00	0.00	0.00	1.75
756	5353	2.949644	GGCGTGGAATAAAGGTGCTTAT	59.050	45.455	0.00	0.00	0.00	1.73
757	5354	2.361789	GGCGTGGAATAAAGGTGCTTA	58.638	47.619	0.00	0.00	0.00	3.09
758	5355	1.173913	GGCGTGGAATAAAGGTGCTT	58.826	50.000	0.00	0.00	0.00	3.91
759	5356	0.679960	GGGCGTGGAATAAAGGTGCT	60.680	55.000	0.00	0.00	0.00	4.40
760	5357	0.679960	AGGGCGTGGAATAAAGGTGC	60.680	55.000	0.00	0.00	0.00	5.01
761	5358	2.169769	TCTAGGGCGTGGAATAAAGGTG	59.830	50.000	0.00	0.00	0.00	4.00
762	5359	2.474112	TCTAGGGCGTGGAATAAAGGT	58.526	47.619	0.00	0.00	0.00	3.50
763	5360	3.467803	CTTCTAGGGCGTGGAATAAAGG	58.532	50.000	6.45	0.00	0.00	3.11
764	5361	3.467803	CCTTCTAGGGCGTGGAATAAAG	58.532	50.000	6.45	0.00	0.00	1.85
765	5362	2.420967	GCCTTCTAGGGCGTGGAATAAA	60.421	50.000	6.45	0.00	42.82	1.40
766	5363	1.140252	GCCTTCTAGGGCGTGGAATAA	59.860	52.381	6.45	0.00	42.82	1.40
767	5364	0.756903	GCCTTCTAGGGCGTGGAATA	59.243	55.000	6.45	0.00	42.82	1.75
768	5365	1.527370	GCCTTCTAGGGCGTGGAAT	59.473	57.895	6.45	0.00	42.82	3.01
769	5366	2.987125	GCCTTCTAGGGCGTGGAA	59.013	61.111	5.86	5.86	42.82	3.53
776	5373	6.441088	AAAGGAACATATAGCCTTCTAGGG	57.559	41.667	0.00	0.00	40.97	3.53
777	5374	6.937465	GGAAAAGGAACATATAGCCTTCTAGG	59.063	42.308	0.00	0.00	40.97	3.02
778	5375	7.740805	AGGAAAAGGAACATATAGCCTTCTAG	58.259	38.462	0.00	0.00	40.97	2.43
779	5376	7.569111	AGAGGAAAAGGAACATATAGCCTTCTA	59.431	37.037	0.00	0.00	40.97	2.10
780	5377	6.388394	AGAGGAAAAGGAACATATAGCCTTCT	59.612	38.462	0.00	0.00	40.97	2.85
781	5378	6.596621	AGAGGAAAAGGAACATATAGCCTTC	58.403	40.000	0.00	0.00	40.97	3.46
782	5379	6.409810	GGAGAGGAAAAGGAACATATAGCCTT	60.410	42.308	0.00	0.00	43.56	4.35
783	5380	5.072464	GGAGAGGAAAAGGAACATATAGCCT	59.928	44.000	0.00	0.00	0.00	4.58
784	5381	5.163195	TGGAGAGGAAAAGGAACATATAGCC	60.163	44.000	0.00	0.00	0.00	3.93
785	5382	5.760743	GTGGAGAGGAAAAGGAACATATAGC	59.239	44.000	0.00	0.00	0.00	2.97
786	5383	5.986135	CGTGGAGAGGAAAAGGAACATATAG	59.014	44.000	0.00	0.00	0.00	1.31
787	5384	5.684030	GCGTGGAGAGGAAAAGGAACATATA	60.684	44.000	0.00	0.00	0.00	0.86
788	5385	4.770795	CGTGGAGAGGAAAAGGAACATAT	58.229	43.478	0.00	0.00	0.00	1.78
789	5386	3.618997	GCGTGGAGAGGAAAAGGAACATA	60.619	47.826	0.00	0.00	0.00	2.29
790	5387	2.876079	GCGTGGAGAGGAAAAGGAACAT	60.876	50.000	0.00	0.00	0.00	2.71
791	5388	1.542547	GCGTGGAGAGGAAAAGGAACA	60.543	52.381	0.00	0.00	0.00	3.18
792	5389	1.157585	GCGTGGAGAGGAAAAGGAAC	58.842	55.000	0.00	0.00	0.00	3.62
793	5390	0.036306	GGCGTGGAGAGGAAAAGGAA	59.964	55.000	0.00	0.00	0.00	3.36
794	5391	0.836400	AGGCGTGGAGAGGAAAAGGA	60.836	55.000	0.00	0.00	0.00	3.36
795	5392	0.902531	TAGGCGTGGAGAGGAAAAGG	59.097	55.000	0.00	0.00	0.00	3.11
796	5393	2.762535	TTAGGCGTGGAGAGGAAAAG	57.237	50.000	0.00	0.00	0.00	2.27
797	5394	3.713826	AATTAGGCGTGGAGAGGAAAA	57.286	42.857	0.00	0.00	0.00	2.29
798	5395	4.829872	TTAATTAGGCGTGGAGAGGAAA	57.170	40.909	0.00	0.00	0.00	3.13
799	5396	4.224370	AGTTTAATTAGGCGTGGAGAGGAA	59.776	41.667	0.00	0.00	0.00	3.36
800	5397	3.773119	AGTTTAATTAGGCGTGGAGAGGA	59.227	43.478	0.00	0.00	0.00	3.71
801	5398	4.138487	AGTTTAATTAGGCGTGGAGAGG	57.862	45.455	0.00	0.00	0.00	3.69
802	5399	6.338937	AGTTAGTTTAATTAGGCGTGGAGAG	58.661	40.000	0.00	0.00	0.00	3.20
803	5400	6.290294	AGTTAGTTTAATTAGGCGTGGAGA	57.710	37.500	0.00	0.00	0.00	3.71
804	5401	7.763071	AGTTAGTTAGTTTAATTAGGCGTGGAG	59.237	37.037	0.00	0.00	0.00	3.86
805	5402	7.614494	AGTTAGTTAGTTTAATTAGGCGTGGA	58.386	34.615	0.00	0.00	0.00	4.02
806	5403	7.838771	AGTTAGTTAGTTTAATTAGGCGTGG	57.161	36.000	0.00	0.00	0.00	4.94
807	5404	8.538039	GCTAGTTAGTTAGTTTAATTAGGCGTG	58.462	37.037	0.00	0.00	0.00	5.34
808	5405	7.708322	GGCTAGTTAGTTAGTTTAATTAGGCGT	59.292	37.037	5.72	0.00	36.71	5.68
809	5406	7.707893	TGGCTAGTTAGTTAGTTTAATTAGGCG	59.292	37.037	12.77	0.00	43.03	5.52
810	5407	8.824781	GTGGCTAGTTAGTTAGTTTAATTAGGC	58.175	37.037	11.52	11.52	41.77	3.93
811	5408	9.322773	GGTGGCTAGTTAGTTAGTTTAATTAGG	57.677	37.037	0.00	0.00	0.00	2.69
812	5409	9.880157	TGGTGGCTAGTTAGTTAGTTTAATTAG	57.120	33.333	0.00	0.00	0.00	1.73
814	5411	9.749340	AATGGTGGCTAGTTAGTTAGTTTAATT	57.251	29.630	0.00	0.00	0.00	1.40
815	5412	9.749340	AAATGGTGGCTAGTTAGTTAGTTTAAT	57.251	29.630	0.00	0.00	0.00	1.40
816	5413	9.223099	GAAATGGTGGCTAGTTAGTTAGTTTAA	57.777	33.333	0.00	0.00	0.00	1.52
817	5414	8.377034	TGAAATGGTGGCTAGTTAGTTAGTTTA	58.623	33.333	0.00	0.00	0.00	2.01
818	5415	7.174426	GTGAAATGGTGGCTAGTTAGTTAGTTT	59.826	37.037	0.00	0.00	0.00	2.66
819	5416	6.653740	GTGAAATGGTGGCTAGTTAGTTAGTT	59.346	38.462	0.00	0.00	0.00	2.24
820	5417	6.171213	GTGAAATGGTGGCTAGTTAGTTAGT	58.829	40.000	0.00	0.00	0.00	2.24
821	5418	5.585047	GGTGAAATGGTGGCTAGTTAGTTAG	59.415	44.000	0.00	0.00	0.00	2.34
822	5419	5.493809	GGTGAAATGGTGGCTAGTTAGTTA	58.506	41.667	0.00	0.00	0.00	2.24
823	5420	4.332828	GGTGAAATGGTGGCTAGTTAGTT	58.667	43.478	0.00	0.00	0.00	2.24
824	5421	3.618997	CGGTGAAATGGTGGCTAGTTAGT	60.619	47.826	0.00	0.00	0.00	2.24
825	5422	2.936498	CGGTGAAATGGTGGCTAGTTAG	59.064	50.000	0.00	0.00	0.00	2.34
826	5423	2.937873	GCGGTGAAATGGTGGCTAGTTA	60.938	50.000	0.00	0.00	0.00	2.24
827	5424	1.821216	CGGTGAAATGGTGGCTAGTT	58.179	50.000	0.00	0.00	0.00	2.24
828	5425	0.676782	GCGGTGAAATGGTGGCTAGT	60.677	55.000	0.00	0.00	0.00	2.57
829	5426	1.705337	CGCGGTGAAATGGTGGCTAG	61.705	60.000	0.00	0.00	0.00	3.42
830	5427	1.743623	CGCGGTGAAATGGTGGCTA	60.744	57.895	0.00	0.00	0.00	3.93
831	5428	3.055719	CGCGGTGAAATGGTGGCT	61.056	61.111	0.00	0.00	0.00	4.75
832	5429	3.361977	ACGCGGTGAAATGGTGGC	61.362	61.111	12.47	0.00	0.00	5.01
833	5430	2.560861	CACGCGGTGAAATGGTGG	59.439	61.111	12.47	0.00	35.23	4.61
834	5431	2.126888	GCACGCGGTGAAATGGTG	60.127	61.111	12.47	0.00	35.23	4.17
835	5432	3.361977	GGCACGCGGTGAAATGGT	61.362	61.111	12.47	0.00	35.23	3.55
836	5433	4.114997	GGGCACGCGGTGAAATGG	62.115	66.667	12.47	0.00	35.23	3.16
837	5434	3.055719	AGGGCACGCGGTGAAATG	61.056	61.111	12.47	0.00	35.23	2.32
838	5435	2.819984	ATCAGGGCACGCGGTGAAAT	62.820	55.000	12.47	0.00	35.23	2.17
839	5436	3.545124	ATCAGGGCACGCGGTGAAA	62.545	57.895	12.47	0.00	35.23	2.69
840	5437	3.950794	GATCAGGGCACGCGGTGAA	62.951	63.158	12.47	0.00	35.23	3.18
841	5438	4.451150	GATCAGGGCACGCGGTGA	62.451	66.667	12.47	5.42	35.23	4.02
847	5444	3.197790	CAAGGCGATCAGGGCACG	61.198	66.667	0.00	0.00	34.40	5.34
848	5445	3.512516	GCAAGGCGATCAGGGCAC	61.513	66.667	0.00	0.00	34.40	5.01
859	5456	1.746991	CTTTCCCCTCTCGCAAGGC	60.747	63.158	0.00	0.00	34.88	4.35
860	5457	0.324943	TTCTTTCCCCTCTCGCAAGG	59.675	55.000	0.00	0.00	36.08	3.61
861	5458	2.185004	TTTCTTTCCCCTCTCGCAAG	57.815	50.000	0.00	0.00	0.00	4.01
862	5459	2.504367	CTTTTCTTTCCCCTCTCGCAA	58.496	47.619	0.00	0.00	0.00	4.85
863	5460	1.882352	GCTTTTCTTTCCCCTCTCGCA	60.882	52.381	0.00	0.00	0.00	5.10
864	5461	0.805614	GCTTTTCTTTCCCCTCTCGC	59.194	55.000	0.00	0.00	0.00	5.03
865	5462	2.481289	AGCTTTTCTTTCCCCTCTCG	57.519	50.000	0.00	0.00	0.00	4.04
900	5497	8.250332	TCACAAGCAATGAGACTAAAAGTTTTT	58.750	29.630	6.10	0.00	0.00	1.94
901	5498	7.702348	GTCACAAGCAATGAGACTAAAAGTTTT	59.298	33.333	6.06	6.06	43.71	2.43
903	5500	6.511767	CGTCACAAGCAATGAGACTAAAAGTT	60.512	38.462	14.66	0.00	44.54	2.66
908	5505	3.325870	CCGTCACAAGCAATGAGACTAA	58.674	45.455	14.66	0.00	44.54	2.24
913	5510	1.503542	GCCCGTCACAAGCAATGAG	59.496	57.895	0.00	0.00	0.00	2.90
918	5515	1.112315	AAATTGGCCCGTCACAAGCA	61.112	50.000	0.00	0.00	0.00	3.91
920	5517	2.432444	TCTAAATTGGCCCGTCACAAG	58.568	47.619	0.00	0.00	0.00	3.16
921	5518	2.570415	TCTAAATTGGCCCGTCACAA	57.430	45.000	0.00	0.00	0.00	3.33
923	5520	2.479560	GCATTCTAAATTGGCCCGTCAC	60.480	50.000	0.00	0.00	0.00	3.67
925	5522	1.748493	TGCATTCTAAATTGGCCCGTC	59.252	47.619	0.00	0.00	0.00	4.79
926	5523	1.846007	TGCATTCTAAATTGGCCCGT	58.154	45.000	0.00	0.00	0.00	5.28
927	5524	3.057315	CCTATGCATTCTAAATTGGCCCG	60.057	47.826	3.54	0.00	0.00	6.13
928	5525	4.151883	TCCTATGCATTCTAAATTGGCCC	58.848	43.478	3.54	0.00	0.00	5.80
929	5526	5.789643	TTCCTATGCATTCTAAATTGGCC	57.210	39.130	3.54	0.00	0.00	5.36
930	5527	7.548780	TGTTTTTCCTATGCATTCTAAATTGGC	59.451	33.333	3.54	0.00	0.00	4.52
1049	7815	2.428890	TCCTGCGTTGGTCATTTGTTTT	59.571	40.909	0.00	0.00	0.00	2.43
1052	7818	1.909700	ATCCTGCGTTGGTCATTTGT	58.090	45.000	0.00	0.00	0.00	2.83
1074	7840	7.245292	TGGAGGATTTGGATTCTTAGGAAAAA	58.755	34.615	0.00	0.00	34.90	1.94
1075	7841	6.799827	TGGAGGATTTGGATTCTTAGGAAAA	58.200	36.000	0.00	0.00	34.90	2.29
1108	7875	3.306710	GGGCCGGTTCAAAGAAATTTGAT	60.307	43.478	1.90	0.00	40.25	2.57
1110	7877	2.037121	AGGGCCGGTTCAAAGAAATTTG	59.963	45.455	1.90	0.00	0.00	2.32
1124	7891	1.450025	GTTTGAGTTCTTAGGGCCGG	58.550	55.000	0.00	0.00	0.00	6.13
1137	7905	6.817765	ATATACACCTGTTGTTGGTTTGAG	57.182	37.500	0.00	0.00	39.91	3.02
1150	7918	6.998074	TGCCCTTAGAATCAAATATACACCTG	59.002	38.462	0.00	0.00	0.00	4.00
1212	7980	4.879545	GCGGGTATATTTGAAAAGTGGAGA	59.120	41.667	0.00	0.00	0.00	3.71
1233	8001	2.173951	TTCGTGTGCAAGCATCTGCG	62.174	55.000	0.00	1.53	45.74	5.18
1295	8084	3.126171	CACGCGGTGAAAATGATTAGGAA	59.874	43.478	12.47	0.00	35.23	3.36
1298	8087	2.440501	GCACGCGGTGAAAATGATTAG	58.559	47.619	12.47	0.00	35.23	1.73
1299	8088	1.131504	GGCACGCGGTGAAAATGATTA	59.868	47.619	12.47	0.00	35.23	1.75
1377	8598	1.548269	TGTGTGTGTGTGTCAGTGAGA	59.452	47.619	0.00	0.00	0.00	3.27
1405	8626	0.871722	GTGTGTGTGTGTGTGTGTGT	59.128	50.000	0.00	0.00	0.00	3.72
1406	8627	0.871057	TGTGTGTGTGTGTGTGTGTG	59.129	50.000	0.00	0.00	0.00	3.82
1407	8628	0.871722	GTGTGTGTGTGTGTGTGTGT	59.128	50.000	0.00	0.00	0.00	3.72
1408	8629	0.871057	TGTGTGTGTGTGTGTGTGTG	59.129	50.000	0.00	0.00	0.00	3.82
1409	8630	0.871722	GTGTGTGTGTGTGTGTGTGT	59.128	50.000	0.00	0.00	0.00	3.72
1410	8631	0.871057	TGTGTGTGTGTGTGTGTGTG	59.129	50.000	0.00	0.00	0.00	3.82
1411	8632	0.871722	GTGTGTGTGTGTGTGTGTGT	59.128	50.000	0.00	0.00	0.00	3.72
1412	8633	0.871057	TGTGTGTGTGTGTGTGTGTG	59.129	50.000	0.00	0.00	0.00	3.82
1413	8634	1.155889	CTGTGTGTGTGTGTGTGTGT	58.844	50.000	0.00	0.00	0.00	3.72
1414	8635	0.179192	GCTGTGTGTGTGTGTGTGTG	60.179	55.000	0.00	0.00	0.00	3.82
1415	8636	0.321564	AGCTGTGTGTGTGTGTGTGT	60.322	50.000	0.00	0.00	0.00	3.72
1416	8637	0.374758	GAGCTGTGTGTGTGTGTGTG	59.625	55.000	0.00	0.00	0.00	3.82
1417	8638	0.744414	GGAGCTGTGTGTGTGTGTGT	60.744	55.000	0.00	0.00	0.00	3.72
1418	8639	0.744057	TGGAGCTGTGTGTGTGTGTG	60.744	55.000	0.00	0.00	0.00	3.82
1419	8640	0.181114	ATGGAGCTGTGTGTGTGTGT	59.819	50.000	0.00	0.00	0.00	3.72
1420	8641	0.589708	CATGGAGCTGTGTGTGTGTG	59.410	55.000	0.00	0.00	0.00	3.82
1421	8642	0.181114	ACATGGAGCTGTGTGTGTGT	59.819	50.000	0.00	0.00	0.00	3.72
1422	8643	0.870393	GACATGGAGCTGTGTGTGTG	59.130	55.000	0.00	0.00	0.00	3.82
1429	8650	1.193323	CTCAGGAGACATGGAGCTGT	58.807	55.000	0.00	0.00	0.00	4.40
1465	8687	3.797546	GCAACTCAGCGCCTCAGC	61.798	66.667	2.29	0.00	37.41	4.26
1500	8730	5.105877	CGATGGAAGTCGCCTAGGATTATTA	60.106	44.000	14.75	0.00	34.56	0.98
1683	8935	1.219664	CTCGTTCCATGCCGGGTTA	59.780	57.895	2.18	0.00	34.36	2.85
1809	9061	2.966309	GCCGAGGAAGTTGTTGCGG	61.966	63.158	0.00	0.00	41.51	5.69
2072	9336	1.123861	TGTCACCTCTGCTTCTGGCT	61.124	55.000	0.00	0.00	42.39	4.75
2089	9353	0.034616	GCTCCTTGTGCTGTCTCTGT	59.965	55.000	0.00	0.00	0.00	3.41
2200	9464	0.103208	ACCGCTTCCGAGCTCATTAG	59.897	55.000	15.40	7.99	46.96	1.73
2233	9497	3.753434	CCTCTCTGACGCCGCTGT	61.753	66.667	0.00	0.00	0.00	4.40
2255	9519	4.467107	GCGGGGTCTCCTCCTCCT	62.467	72.222	0.00	0.00	0.00	3.69
2604	9868	4.730081	GCGATAGACACATCGGCA	57.270	55.556	7.52	0.00	46.20	5.69
2986	10250	1.909781	TCGTGCGGGTCTTTAGGGT	60.910	57.895	0.00	0.00	0.00	4.34
3228	10492	3.844211	TGTTACCCACTTTCCTCATAGCT	59.156	43.478	0.00	0.00	0.00	3.32
3237	10501	0.958876	CCGCCCTGTTACCCACTTTC	60.959	60.000	0.00	0.00	0.00	2.62
3246	10510	4.040426	TGCATGGCCGCCCTGTTA	62.040	61.111	15.24	3.63	0.00	2.41
3332	10596	1.396543	GAAGTCACTGCTCGCGTACG	61.397	60.000	11.84	11.84	42.01	3.67
3745	11009	2.436646	CATCCTCTTTGCGCCGGT	60.437	61.111	4.18	0.00	0.00	5.28
3872	11136	4.351938	CCTCGCGGTTCACGGACA	62.352	66.667	6.13	0.00	44.51	4.02
3920	11184	3.443925	CTCGAGCCAGGTGAGCGA	61.444	66.667	0.00	0.00	34.64	4.93
3962	11226	0.941463	GTCTAGCATCCACATCGCCG	60.941	60.000	0.00	0.00	0.00	6.46
4206	11470	2.047655	CTGCGCCGGTACTTCCAA	60.048	61.111	4.18	0.00	35.57	3.53
4322	11586	4.796231	CCACCTCCGCCGTCTTCG	62.796	72.222	0.00	0.00	0.00	3.79
4530	11794	3.751246	TAGAACCCGGCGACCACG	61.751	66.667	9.30	0.00	42.93	4.94
4626	11890	4.262036	GGCAGATCCTACATGATACGTTCA	60.262	45.833	0.00	0.00	39.12	3.18
4675	11959	0.947244	CAACTGGAACTGCAGTCCAC	59.053	55.000	25.10	17.27	0.00	4.02
4707	11991	3.822940	TCCAAAAGGGAAAACGAGCTAA	58.177	40.909	0.00	0.00	44.80	3.09
4721	12005	4.911390	ACTACAAGGTCCATCTCCAAAAG	58.089	43.478	0.00	0.00	0.00	2.27
4726	12010	5.221283	GCTAAGTACTACAAGGTCCATCTCC	60.221	48.000	0.00	0.00	0.00	3.71
4798	12350	7.863877	CACAAATCTTGACACAAGAATCAATGA	59.136	33.333	16.22	0.00	34.43	2.57
4800	12352	7.650504	CACACAAATCTTGACACAAGAATCAAT	59.349	33.333	16.22	0.00	34.43	2.57
4801	12353	6.974048	CACACAAATCTTGACACAAGAATCAA	59.026	34.615	16.22	0.00	33.82	2.57
4826	12379	6.517914	TGAAACAACGCATGAAAATAAACC	57.482	33.333	0.00	0.00	0.00	3.27
4840	12737	5.399301	CAGCCTAAAAAGTCATGAAACAACG	59.601	40.000	0.00	0.00	0.00	4.10
4894	12976	3.445096	CCAGCCAAGGAAAGAAAATCGAT	59.555	43.478	0.00	0.00	0.00	3.59
4897	12979	5.411831	AATCCAGCCAAGGAAAGAAAATC	57.588	39.130	0.00	0.00	41.92	2.17
4907	12989	3.656559	CAAGTCAAAAATCCAGCCAAGG	58.343	45.455	0.00	0.00	0.00	3.61
4930	13013	4.569719	ATTCGACTTATCCCAAACAGGT	57.430	40.909	0.00	0.00	34.66	4.00
4953	13036	5.703130	AGCAAGTCCAAAACTTAGCTAGAAG	59.297	40.000	0.00	0.00	46.69	2.85
5002	13086	6.711277	TGTATAATGGATCTACTGCCCAATC	58.289	40.000	0.00	0.00	33.15	2.67
5027	13111	7.978414	CCCACACAAACATAAACATATGCAATA	59.022	33.333	1.58	0.00	0.00	1.90
5037	13121	4.873259	AGCAAAACCCACACAAACATAAAC	59.127	37.500	0.00	0.00	0.00	2.01
5041	13125	3.625649	AAGCAAAACCCACACAAACAT	57.374	38.095	0.00	0.00	0.00	2.71
5045	13129	2.079925	GCAAAAGCAAAACCCACACAA	58.920	42.857	0.00	0.00	0.00	3.33
5048	13132	2.777832	AAGCAAAAGCAAAACCCACA	57.222	40.000	0.00	0.00	0.00	4.17
5051	13135	4.963276	AAGAAAAGCAAAAGCAAAACCC	57.037	36.364	0.00	0.00	0.00	4.11
5099	13183	4.429854	TGCTGCATAACATACCCATGTA	57.570	40.909	0.00	0.00	44.83	2.29
5110	13194	5.291128	ACGTACAGTAGAATTGCTGCATAAC	59.709	40.000	1.84	0.00	40.30	1.89
5113	13197	3.861840	ACGTACAGTAGAATTGCTGCAT	58.138	40.909	1.84	0.00	40.30	3.96
5121	13205	3.310774	ACGCGACATACGTACAGTAGAAT	59.689	43.478	15.93	0.00	43.02	2.40
5135	13219	4.406069	CAGAATGAATTTTCACGCGACAT	58.594	39.130	15.93	2.29	40.49	3.06
5172	13257	5.535783	TCTCAAAGCAGGAAATCAATGACAA	59.464	36.000	0.00	0.00	0.00	3.18
5185	13270	2.818432	AGAGCACAAATCTCAAAGCAGG	59.182	45.455	0.00	0.00	33.15	4.85
5207	13292	5.292101	AGAACTCGCATAACATAGCAGAAAC	59.708	40.000	0.00	0.00	0.00	2.78
5214	13302	5.730568	GCCCAAAAGAACTCGCATAACATAG	60.731	44.000	0.00	0.00	0.00	2.23
5216	13304	3.119495	GCCCAAAAGAACTCGCATAACAT	60.119	43.478	0.00	0.00	0.00	2.71
5221	13309	2.290323	ACTAGCCCAAAAGAACTCGCAT	60.290	45.455	0.00	0.00	0.00	4.73
5251	13340	3.146066	GACAGGCCCAAATATGCGATTA	58.854	45.455	0.00	0.00	0.00	1.75
5272	13361	4.100529	CGCTTCAGCATGTTAAGGAATTG	58.899	43.478	0.00	0.00	42.21	2.32
5286	13375	0.455633	CACAGGAAATGCGCTTCAGC	60.456	55.000	9.73	0.00	37.78	4.26
5294	13383	3.137533	GGCTAGATCTCACAGGAAATGC	58.862	50.000	0.00	0.00	0.00	3.56
5306	13395	3.011257	GGATAGAGTGGAGGGCTAGATCT	59.989	52.174	0.00	0.00	0.00	2.75
5313	13402	1.141858	CAAAGGGATAGAGTGGAGGGC	59.858	57.143	0.00	0.00	0.00	5.19
5325	13414	7.684428	GCAGTAAACAGAAAAGAACAAAGGGAT	60.684	37.037	0.00	0.00	0.00	3.85
5405	13495	7.859325	GTGTATACATTTACACTCACCCAAT	57.141	36.000	9.18	0.00	45.48	3.16
5462	13552	8.267894	AGTATGCAAGGACTAGTCAAACAATAT	58.732	33.333	23.91	11.14	0.00	1.28
5469	13559	6.599356	TTGTAGTATGCAAGGACTAGTCAA	57.401	37.500	23.91	3.18	35.19	3.18
5473	13563	8.177663	CACATTTTTGTAGTATGCAAGGACTAG	58.822	37.037	6.72	0.00	42.90	2.57
5476	13566	5.572896	GCACATTTTTGTAGTATGCAAGGAC	59.427	40.000	0.00	0.00	42.90	3.85
5505	13595	1.454201	TCAACACAACTTTGCACCGA	58.546	45.000	0.00	0.00	0.00	4.69
5652	13744	5.271598	AGAAGGAATGAATTGGTGGCATTA	58.728	37.500	0.00	0.00	32.80	1.90

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.