Multiple sequence alignment - TraesCS5B01G484000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G484000 | chr5B | 100.000 | 2720 | 0 | 0 | 1 | 2720 | 655615588 | 655612869 | 0.000000e+00 | 5024.0 |
1 | TraesCS5B01G484000 | chr5A | 90.997 | 1544 | 65 | 30 | 209 | 1723 | 648613014 | 648611516 | 0.000000e+00 | 2013.0 |
2 | TraesCS5B01G484000 | chr5A | 88.745 | 231 | 19 | 2 | 195 | 419 | 648614621 | 648614392 | 2.670000e-70 | 276.0 |
3 | TraesCS5B01G484000 | chr5A | 100.000 | 28 | 0 | 0 | 1826 | 1853 | 648611436 | 648611409 | 5.000000e-03 | 52.8 |
4 | TraesCS5B01G484000 | chr5D | 92.794 | 1249 | 73 | 10 | 829 | 2070 | 520377964 | 520376726 | 0.000000e+00 | 1792.0 |
5 | TraesCS5B01G484000 | chr5D | 89.908 | 545 | 29 | 7 | 240 | 765 | 520378510 | 520377973 | 0.000000e+00 | 678.0 |
6 | TraesCS5B01G484000 | chr7D | 79.088 | 636 | 120 | 10 | 2071 | 2697 | 315475989 | 315476620 | 2.500000e-115 | 425.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G484000 | chr5B | 655612869 | 655615588 | 2719 | True | 5024.0 | 5024 | 100.000000 | 1 | 2720 | 1 | chr5B.!!$R1 | 2719 |
1 | TraesCS5B01G484000 | chr5A | 648611409 | 648614621 | 3212 | True | 780.6 | 2013 | 93.247333 | 195 | 1853 | 3 | chr5A.!!$R1 | 1658 |
2 | TraesCS5B01G484000 | chr5D | 520376726 | 520378510 | 1784 | True | 1235.0 | 1792 | 91.351000 | 240 | 2070 | 2 | chr5D.!!$R1 | 1830 |
3 | TraesCS5B01G484000 | chr7D | 315475989 | 315476620 | 631 | False | 425.0 | 425 | 79.088000 | 2071 | 2697 | 1 | chr7D.!!$F1 | 626 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
168 | 169 | 0.035915 | GCTTCAGTTCAGGGGAGGAC | 60.036 | 60.0 | 0.0 | 0.0 | 0.0 | 3.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1985 | 3626 | 0.040425 | GTTTGCGTTGAAGATGCCGT | 60.04 | 50.0 | 0.0 | 0.0 | 39.64 | 5.68 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
19 | 20 | 2.719426 | CCGAGAAGGACACGTAGTTT | 57.281 | 50.000 | 0.00 | 0.00 | 41.10 | 2.66 |
20 | 21 | 2.325761 | CCGAGAAGGACACGTAGTTTG | 58.674 | 52.381 | 0.00 | 0.00 | 41.10 | 2.93 |
21 | 22 | 2.288030 | CCGAGAAGGACACGTAGTTTGT | 60.288 | 50.000 | 0.00 | 0.00 | 41.10 | 2.83 |
22 | 23 | 3.378339 | CGAGAAGGACACGTAGTTTGTT | 58.622 | 45.455 | 0.00 | 0.00 | 41.61 | 2.83 |
23 | 24 | 3.181774 | CGAGAAGGACACGTAGTTTGTTG | 59.818 | 47.826 | 0.00 | 0.00 | 41.61 | 3.33 |
24 | 25 | 2.870411 | AGAAGGACACGTAGTTTGTTGC | 59.130 | 45.455 | 0.00 | 0.00 | 41.61 | 4.17 |
25 | 26 | 2.614829 | AGGACACGTAGTTTGTTGCT | 57.385 | 45.000 | 0.00 | 0.00 | 41.61 | 3.91 |
26 | 27 | 2.210116 | AGGACACGTAGTTTGTTGCTG | 58.790 | 47.619 | 0.00 | 0.00 | 41.61 | 4.41 |
27 | 28 | 1.937899 | GGACACGTAGTTTGTTGCTGT | 59.062 | 47.619 | 0.00 | 0.00 | 41.61 | 4.40 |
28 | 29 | 2.033151 | GGACACGTAGTTTGTTGCTGTC | 60.033 | 50.000 | 0.00 | 0.00 | 41.61 | 3.51 |
29 | 30 | 2.605818 | GACACGTAGTTTGTTGCTGTCA | 59.394 | 45.455 | 0.00 | 0.00 | 41.61 | 3.58 |
30 | 31 | 2.607635 | ACACGTAGTTTGTTGCTGTCAG | 59.392 | 45.455 | 0.00 | 0.00 | 41.61 | 3.51 |
31 | 32 | 2.032894 | CACGTAGTTTGTTGCTGTCAGG | 60.033 | 50.000 | 1.14 | 0.00 | 41.61 | 3.86 |
32 | 33 | 1.531149 | CGTAGTTTGTTGCTGTCAGGG | 59.469 | 52.381 | 1.14 | 0.00 | 0.00 | 4.45 |
33 | 34 | 2.805295 | CGTAGTTTGTTGCTGTCAGGGA | 60.805 | 50.000 | 1.14 | 0.00 | 0.00 | 4.20 |
34 | 35 | 1.972872 | AGTTTGTTGCTGTCAGGGAG | 58.027 | 50.000 | 1.14 | 0.00 | 0.00 | 4.30 |
35 | 36 | 1.490490 | AGTTTGTTGCTGTCAGGGAGA | 59.510 | 47.619 | 1.14 | 0.00 | 0.00 | 3.71 |
36 | 37 | 1.876156 | GTTTGTTGCTGTCAGGGAGAG | 59.124 | 52.381 | 1.14 | 0.00 | 0.00 | 3.20 |
37 | 38 | 1.423584 | TTGTTGCTGTCAGGGAGAGA | 58.576 | 50.000 | 1.14 | 0.00 | 0.00 | 3.10 |
38 | 39 | 1.423584 | TGTTGCTGTCAGGGAGAGAA | 58.576 | 50.000 | 1.14 | 0.00 | 0.00 | 2.87 |
39 | 40 | 1.768275 | TGTTGCTGTCAGGGAGAGAAA | 59.232 | 47.619 | 1.14 | 0.00 | 0.00 | 2.52 |
40 | 41 | 2.224378 | TGTTGCTGTCAGGGAGAGAAAG | 60.224 | 50.000 | 1.14 | 0.00 | 0.00 | 2.62 |
41 | 42 | 0.979665 | TGCTGTCAGGGAGAGAAAGG | 59.020 | 55.000 | 1.14 | 0.00 | 0.00 | 3.11 |
42 | 43 | 0.392327 | GCTGTCAGGGAGAGAAAGGC | 60.392 | 60.000 | 1.14 | 0.00 | 0.00 | 4.35 |
43 | 44 | 1.274712 | CTGTCAGGGAGAGAAAGGCT | 58.725 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
44 | 45 | 1.206849 | CTGTCAGGGAGAGAAAGGCTC | 59.793 | 57.143 | 0.00 | 0.00 | 44.29 | 4.70 |
45 | 46 | 1.270907 | GTCAGGGAGAGAAAGGCTCA | 58.729 | 55.000 | 0.00 | 0.00 | 46.45 | 4.26 |
46 | 47 | 1.625818 | GTCAGGGAGAGAAAGGCTCAA | 59.374 | 52.381 | 0.00 | 0.00 | 46.45 | 3.02 |
47 | 48 | 1.625818 | TCAGGGAGAGAAAGGCTCAAC | 59.374 | 52.381 | 0.00 | 0.00 | 46.45 | 3.18 |
48 | 49 | 1.627834 | CAGGGAGAGAAAGGCTCAACT | 59.372 | 52.381 | 0.00 | 0.00 | 46.45 | 3.16 |
49 | 50 | 2.834549 | CAGGGAGAGAAAGGCTCAACTA | 59.165 | 50.000 | 0.00 | 0.00 | 46.45 | 2.24 |
50 | 51 | 3.454082 | CAGGGAGAGAAAGGCTCAACTAT | 59.546 | 47.826 | 0.00 | 0.00 | 46.45 | 2.12 |
51 | 52 | 4.080638 | CAGGGAGAGAAAGGCTCAACTATT | 60.081 | 45.833 | 0.00 | 0.00 | 46.45 | 1.73 |
52 | 53 | 4.538089 | AGGGAGAGAAAGGCTCAACTATTT | 59.462 | 41.667 | 0.00 | 0.00 | 46.45 | 1.40 |
53 | 54 | 5.014649 | AGGGAGAGAAAGGCTCAACTATTTT | 59.985 | 40.000 | 0.00 | 0.00 | 46.45 | 1.82 |
54 | 55 | 5.124617 | GGGAGAGAAAGGCTCAACTATTTTG | 59.875 | 44.000 | 0.00 | 0.00 | 46.45 | 2.44 |
55 | 56 | 5.124617 | GGAGAGAAAGGCTCAACTATTTTGG | 59.875 | 44.000 | 0.00 | 0.00 | 46.45 | 3.28 |
56 | 57 | 5.880901 | AGAGAAAGGCTCAACTATTTTGGA | 58.119 | 37.500 | 0.00 | 0.00 | 46.45 | 3.53 |
57 | 58 | 5.707764 | AGAGAAAGGCTCAACTATTTTGGAC | 59.292 | 40.000 | 0.00 | 0.00 | 46.45 | 4.02 |
58 | 59 | 4.767409 | AGAAAGGCTCAACTATTTTGGACC | 59.233 | 41.667 | 0.00 | 0.00 | 0.00 | 4.46 |
59 | 60 | 3.806949 | AGGCTCAACTATTTTGGACCA | 57.193 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 |
60 | 61 | 4.112634 | AGGCTCAACTATTTTGGACCAA | 57.887 | 40.909 | 1.69 | 1.69 | 0.00 | 3.67 |
61 | 62 | 4.677182 | AGGCTCAACTATTTTGGACCAAT | 58.323 | 39.130 | 7.99 | 0.00 | 0.00 | 3.16 |
62 | 63 | 4.463891 | AGGCTCAACTATTTTGGACCAATG | 59.536 | 41.667 | 7.99 | 2.17 | 0.00 | 2.82 |
63 | 64 | 4.381932 | GGCTCAACTATTTTGGACCAATGG | 60.382 | 45.833 | 7.99 | 0.00 | 0.00 | 3.16 |
64 | 65 | 4.220602 | GCTCAACTATTTTGGACCAATGGT | 59.779 | 41.667 | 3.74 | 3.74 | 39.44 | 3.55 |
65 | 66 | 5.713025 | CTCAACTATTTTGGACCAATGGTG | 58.287 | 41.667 | 10.84 | 8.04 | 35.25 | 4.17 |
66 | 67 | 5.389520 | TCAACTATTTTGGACCAATGGTGA | 58.610 | 37.500 | 10.84 | 10.14 | 35.25 | 4.02 |
67 | 68 | 5.242838 | TCAACTATTTTGGACCAATGGTGAC | 59.757 | 40.000 | 10.84 | 2.81 | 35.25 | 3.67 |
81 | 82 | 3.510388 | TGGTGACATAGAAAGAGCGAG | 57.490 | 47.619 | 0.00 | 0.00 | 33.40 | 5.03 |
82 | 83 | 3.089284 | TGGTGACATAGAAAGAGCGAGA | 58.911 | 45.455 | 0.00 | 0.00 | 33.40 | 4.04 |
83 | 84 | 3.129462 | TGGTGACATAGAAAGAGCGAGAG | 59.871 | 47.826 | 0.00 | 0.00 | 33.40 | 3.20 |
84 | 85 | 3.378742 | GGTGACATAGAAAGAGCGAGAGA | 59.621 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
85 | 86 | 4.142359 | GGTGACATAGAAAGAGCGAGAGAA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 2.87 |
86 | 87 | 5.403246 | GTGACATAGAAAGAGCGAGAGAAA | 58.597 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
87 | 88 | 5.864474 | GTGACATAGAAAGAGCGAGAGAAAA | 59.136 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
88 | 89 | 6.034470 | GTGACATAGAAAGAGCGAGAGAAAAG | 59.966 | 42.308 | 0.00 | 0.00 | 0.00 | 2.27 |
89 | 90 | 5.415221 | ACATAGAAAGAGCGAGAGAAAAGG | 58.585 | 41.667 | 0.00 | 0.00 | 0.00 | 3.11 |
90 | 91 | 5.186021 | ACATAGAAAGAGCGAGAGAAAAGGA | 59.814 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
91 | 92 | 4.608948 | AGAAAGAGCGAGAGAAAAGGAA | 57.391 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
92 | 93 | 4.962155 | AGAAAGAGCGAGAGAAAAGGAAA | 58.038 | 39.130 | 0.00 | 0.00 | 0.00 | 3.13 |
93 | 94 | 5.555966 | AGAAAGAGCGAGAGAAAAGGAAAT | 58.444 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
94 | 95 | 6.000840 | AGAAAGAGCGAGAGAAAAGGAAATT | 58.999 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
95 | 96 | 5.871465 | AAGAGCGAGAGAAAAGGAAATTC | 57.129 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
96 | 97 | 4.899502 | AGAGCGAGAGAAAAGGAAATTCA | 58.100 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
97 | 98 | 4.934602 | AGAGCGAGAGAAAAGGAAATTCAG | 59.065 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
98 | 99 | 4.646572 | AGCGAGAGAAAAGGAAATTCAGT | 58.353 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
99 | 100 | 4.453819 | AGCGAGAGAAAAGGAAATTCAGTG | 59.546 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
100 | 101 | 4.716943 | CGAGAGAAAAGGAAATTCAGTGC | 58.283 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
101 | 102 | 4.214119 | CGAGAGAAAAGGAAATTCAGTGCA | 59.786 | 41.667 | 0.00 | 0.00 | 0.00 | 4.57 |
102 | 103 | 5.277974 | CGAGAGAAAAGGAAATTCAGTGCAA | 60.278 | 40.000 | 0.00 | 0.00 | 0.00 | 4.08 |
103 | 104 | 6.081872 | AGAGAAAAGGAAATTCAGTGCAAG | 57.918 | 37.500 | 0.00 | 0.00 | 0.00 | 4.01 |
104 | 105 | 5.829924 | AGAGAAAAGGAAATTCAGTGCAAGA | 59.170 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
105 | 106 | 6.492772 | AGAGAAAAGGAAATTCAGTGCAAGAT | 59.507 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
106 | 107 | 7.015001 | AGAGAAAAGGAAATTCAGTGCAAGATT | 59.985 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
107 | 108 | 6.927381 | AGAAAAGGAAATTCAGTGCAAGATTG | 59.073 | 34.615 | 0.00 | 0.00 | 0.00 | 2.67 |
108 | 109 | 6.409524 | AAAGGAAATTCAGTGCAAGATTGA | 57.590 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
109 | 110 | 6.409524 | AAGGAAATTCAGTGCAAGATTGAA | 57.590 | 33.333 | 0.00 | 0.00 | 35.52 | 2.69 |
110 | 111 | 6.022163 | AGGAAATTCAGTGCAAGATTGAAG | 57.978 | 37.500 | 0.00 | 0.00 | 34.64 | 3.02 |
111 | 112 | 5.771666 | AGGAAATTCAGTGCAAGATTGAAGA | 59.228 | 36.000 | 0.00 | 0.00 | 34.64 | 2.87 |
112 | 113 | 6.266103 | AGGAAATTCAGTGCAAGATTGAAGAA | 59.734 | 34.615 | 0.00 | 0.00 | 34.64 | 2.52 |
113 | 114 | 6.925165 | GGAAATTCAGTGCAAGATTGAAGAAA | 59.075 | 34.615 | 0.00 | 0.00 | 34.64 | 2.52 |
114 | 115 | 7.095899 | GGAAATTCAGTGCAAGATTGAAGAAAC | 60.096 | 37.037 | 0.00 | 0.00 | 34.64 | 2.78 |
115 | 116 | 6.645790 | ATTCAGTGCAAGATTGAAGAAACT | 57.354 | 33.333 | 0.00 | 0.00 | 34.64 | 2.66 |
116 | 117 | 7.750229 | ATTCAGTGCAAGATTGAAGAAACTA | 57.250 | 32.000 | 0.00 | 0.00 | 34.64 | 2.24 |
117 | 118 | 7.750229 | TTCAGTGCAAGATTGAAGAAACTAT | 57.250 | 32.000 | 0.00 | 0.00 | 0.00 | 2.12 |
118 | 119 | 7.750229 | TCAGTGCAAGATTGAAGAAACTATT | 57.250 | 32.000 | 0.00 | 0.00 | 0.00 | 1.73 |
119 | 120 | 7.587629 | TCAGTGCAAGATTGAAGAAACTATTG | 58.412 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
120 | 121 | 6.307318 | CAGTGCAAGATTGAAGAAACTATTGC | 59.693 | 38.462 | 0.00 | 0.00 | 41.54 | 3.56 |
121 | 122 | 5.574443 | GTGCAAGATTGAAGAAACTATTGCC | 59.426 | 40.000 | 0.00 | 0.00 | 40.71 | 4.52 |
122 | 123 | 5.243507 | TGCAAGATTGAAGAAACTATTGCCA | 59.756 | 36.000 | 0.00 | 0.00 | 40.71 | 4.92 |
123 | 124 | 6.071221 | TGCAAGATTGAAGAAACTATTGCCAT | 60.071 | 34.615 | 0.00 | 0.00 | 40.71 | 4.40 |
124 | 125 | 6.255020 | GCAAGATTGAAGAAACTATTGCCATG | 59.745 | 38.462 | 0.00 | 0.00 | 36.64 | 3.66 |
125 | 126 | 7.318141 | CAAGATTGAAGAAACTATTGCCATGT | 58.682 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
126 | 127 | 7.472334 | AGATTGAAGAAACTATTGCCATGTT | 57.528 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
127 | 128 | 7.318141 | AGATTGAAGAAACTATTGCCATGTTG | 58.682 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
128 | 129 | 5.389859 | TGAAGAAACTATTGCCATGTTGG | 57.610 | 39.130 | 0.00 | 0.00 | 41.55 | 3.77 |
129 | 130 | 5.076182 | TGAAGAAACTATTGCCATGTTGGA | 58.924 | 37.500 | 0.00 | 0.00 | 40.96 | 3.53 |
130 | 131 | 5.048083 | TGAAGAAACTATTGCCATGTTGGAC | 60.048 | 40.000 | 0.00 | 0.00 | 40.96 | 4.02 |
131 | 132 | 3.763897 | AGAAACTATTGCCATGTTGGACC | 59.236 | 43.478 | 0.00 | 0.00 | 40.96 | 4.46 |
132 | 133 | 2.897271 | ACTATTGCCATGTTGGACCA | 57.103 | 45.000 | 0.00 | 0.00 | 40.96 | 4.02 |
133 | 134 | 2.446435 | ACTATTGCCATGTTGGACCAC | 58.554 | 47.619 | 0.00 | 0.00 | 40.96 | 4.16 |
134 | 135 | 2.224992 | ACTATTGCCATGTTGGACCACA | 60.225 | 45.455 | 0.00 | 0.00 | 40.96 | 4.17 |
135 | 136 | 1.941377 | ATTGCCATGTTGGACCACAT | 58.059 | 45.000 | 0.00 | 0.00 | 40.96 | 3.21 |
136 | 137 | 1.255882 | TTGCCATGTTGGACCACATC | 58.744 | 50.000 | 0.00 | 0.00 | 40.96 | 3.06 |
137 | 138 | 0.112025 | TGCCATGTTGGACCACATCA | 59.888 | 50.000 | 0.00 | 0.00 | 40.96 | 3.07 |
138 | 139 | 1.272592 | TGCCATGTTGGACCACATCAT | 60.273 | 47.619 | 0.00 | 0.00 | 40.96 | 2.45 |
139 | 140 | 1.406539 | GCCATGTTGGACCACATCATC | 59.593 | 52.381 | 0.00 | 0.00 | 40.96 | 2.92 |
140 | 141 | 2.725637 | CCATGTTGGACCACATCATCA | 58.274 | 47.619 | 0.00 | 0.00 | 40.96 | 3.07 |
141 | 142 | 3.090790 | CCATGTTGGACCACATCATCAA | 58.909 | 45.455 | 0.00 | 0.00 | 40.96 | 2.57 |
142 | 143 | 3.510753 | CCATGTTGGACCACATCATCAAA | 59.489 | 43.478 | 0.00 | 0.00 | 40.96 | 2.69 |
143 | 144 | 4.160814 | CCATGTTGGACCACATCATCAAAT | 59.839 | 41.667 | 0.00 | 0.00 | 40.96 | 2.32 |
144 | 145 | 5.360429 | CCATGTTGGACCACATCATCAAATA | 59.640 | 40.000 | 0.00 | 0.00 | 40.96 | 1.40 |
145 | 146 | 6.127394 | CCATGTTGGACCACATCATCAAATAA | 60.127 | 38.462 | 0.00 | 0.00 | 40.96 | 1.40 |
146 | 147 | 6.907853 | TGTTGGACCACATCATCAAATAAA | 57.092 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
147 | 148 | 6.686630 | TGTTGGACCACATCATCAAATAAAC | 58.313 | 36.000 | 0.00 | 0.00 | 0.00 | 2.01 |
148 | 149 | 5.913137 | TGGACCACATCATCAAATAAACC | 57.087 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
149 | 150 | 4.397730 | TGGACCACATCATCAAATAAACCG | 59.602 | 41.667 | 0.00 | 0.00 | 0.00 | 4.44 |
150 | 151 | 4.351192 | GACCACATCATCAAATAAACCGC | 58.649 | 43.478 | 0.00 | 0.00 | 0.00 | 5.68 |
151 | 152 | 4.016444 | ACCACATCATCAAATAAACCGCT | 58.984 | 39.130 | 0.00 | 0.00 | 0.00 | 5.52 |
152 | 153 | 4.462483 | ACCACATCATCAAATAAACCGCTT | 59.538 | 37.500 | 0.00 | 0.00 | 0.00 | 4.68 |
153 | 154 | 5.036737 | CCACATCATCAAATAAACCGCTTC | 58.963 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
154 | 155 | 5.392919 | CCACATCATCAAATAAACCGCTTCA | 60.393 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
155 | 156 | 5.740569 | CACATCATCAAATAAACCGCTTCAG | 59.259 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
156 | 157 | 5.415701 | ACATCATCAAATAAACCGCTTCAGT | 59.584 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
157 | 158 | 5.957842 | TCATCAAATAAACCGCTTCAGTT | 57.042 | 34.783 | 0.00 | 0.00 | 0.00 | 3.16 |
158 | 159 | 5.938322 | TCATCAAATAAACCGCTTCAGTTC | 58.062 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
159 | 160 | 5.471797 | TCATCAAATAAACCGCTTCAGTTCA | 59.528 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
160 | 161 | 5.356882 | TCAAATAAACCGCTTCAGTTCAG | 57.643 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
161 | 162 | 4.215399 | TCAAATAAACCGCTTCAGTTCAGG | 59.785 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
162 | 163 | 2.178912 | TAAACCGCTTCAGTTCAGGG | 57.821 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
164 | 165 | 1.415672 | AACCGCTTCAGTTCAGGGGA | 61.416 | 55.000 | 9.81 | 0.00 | 45.30 | 4.81 |
165 | 166 | 1.078848 | CCGCTTCAGTTCAGGGGAG | 60.079 | 63.158 | 0.00 | 0.00 | 45.30 | 4.30 |
166 | 167 | 1.078848 | CGCTTCAGTTCAGGGGAGG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
167 | 168 | 1.544825 | CGCTTCAGTTCAGGGGAGGA | 61.545 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
168 | 169 | 0.035915 | GCTTCAGTTCAGGGGAGGAC | 60.036 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
169 | 170 | 0.615850 | CTTCAGTTCAGGGGAGGACC | 59.384 | 60.000 | 0.00 | 0.00 | 39.11 | 4.46 |
170 | 171 | 0.104672 | TTCAGTTCAGGGGAGGACCA | 60.105 | 55.000 | 0.00 | 0.00 | 42.91 | 4.02 |
171 | 172 | 0.104672 | TCAGTTCAGGGGAGGACCAA | 60.105 | 55.000 | 0.00 | 0.00 | 42.91 | 3.67 |
172 | 173 | 0.771127 | CAGTTCAGGGGAGGACCAAA | 59.229 | 55.000 | 0.00 | 0.00 | 42.91 | 3.28 |
173 | 174 | 0.771755 | AGTTCAGGGGAGGACCAAAC | 59.228 | 55.000 | 0.00 | 0.00 | 42.91 | 2.93 |
174 | 175 | 0.476771 | GTTCAGGGGAGGACCAAACA | 59.523 | 55.000 | 0.00 | 0.00 | 42.91 | 2.83 |
175 | 176 | 1.075536 | GTTCAGGGGAGGACCAAACAT | 59.924 | 52.381 | 0.00 | 0.00 | 42.91 | 2.71 |
176 | 177 | 0.698238 | TCAGGGGAGGACCAAACATG | 59.302 | 55.000 | 0.00 | 0.00 | 42.91 | 3.21 |
177 | 178 | 0.405585 | CAGGGGAGGACCAAACATGT | 59.594 | 55.000 | 0.00 | 0.00 | 42.91 | 3.21 |
178 | 179 | 0.698818 | AGGGGAGGACCAAACATGTC | 59.301 | 55.000 | 0.00 | 0.00 | 42.91 | 3.06 |
179 | 180 | 0.698818 | GGGGAGGACCAAACATGTCT | 59.301 | 55.000 | 0.00 | 0.00 | 42.91 | 3.41 |
180 | 181 | 1.614317 | GGGGAGGACCAAACATGTCTG | 60.614 | 57.143 | 0.00 | 0.00 | 42.91 | 3.51 |
181 | 182 | 1.614317 | GGGAGGACCAAACATGTCTGG | 60.614 | 57.143 | 16.94 | 16.94 | 39.85 | 3.86 |
182 | 183 | 1.168714 | GAGGACCAAACATGTCTGGC | 58.831 | 55.000 | 18.43 | 10.66 | 36.03 | 4.85 |
183 | 184 | 0.773644 | AGGACCAAACATGTCTGGCT | 59.226 | 50.000 | 18.43 | 5.32 | 36.03 | 4.75 |
184 | 185 | 1.145738 | AGGACCAAACATGTCTGGCTT | 59.854 | 47.619 | 18.43 | 4.89 | 36.03 | 4.35 |
185 | 186 | 2.375174 | AGGACCAAACATGTCTGGCTTA | 59.625 | 45.455 | 18.43 | 0.00 | 36.03 | 3.09 |
186 | 187 | 3.153919 | GGACCAAACATGTCTGGCTTAA | 58.846 | 45.455 | 18.43 | 0.00 | 36.03 | 1.85 |
187 | 188 | 3.191371 | GGACCAAACATGTCTGGCTTAAG | 59.809 | 47.826 | 18.43 | 0.00 | 36.03 | 1.85 |
188 | 189 | 4.072131 | GACCAAACATGTCTGGCTTAAGA | 58.928 | 43.478 | 18.43 | 0.00 | 36.03 | 2.10 |
189 | 190 | 4.469657 | ACCAAACATGTCTGGCTTAAGAA | 58.530 | 39.130 | 18.43 | 0.00 | 36.03 | 2.52 |
190 | 191 | 4.520492 | ACCAAACATGTCTGGCTTAAGAAG | 59.480 | 41.667 | 18.43 | 2.91 | 36.03 | 2.85 |
191 | 192 | 4.520492 | CCAAACATGTCTGGCTTAAGAAGT | 59.480 | 41.667 | 4.99 | 0.00 | 0.00 | 3.01 |
192 | 193 | 5.010012 | CCAAACATGTCTGGCTTAAGAAGTT | 59.990 | 40.000 | 4.99 | 0.00 | 0.00 | 2.66 |
193 | 194 | 6.206634 | CCAAACATGTCTGGCTTAAGAAGTTA | 59.793 | 38.462 | 4.99 | 0.00 | 0.00 | 2.24 |
199 | 200 | 6.650120 | TGTCTGGCTTAAGAAGTTATAAGGG | 58.350 | 40.000 | 6.67 | 0.00 | 31.28 | 3.95 |
211 | 212 | 5.959618 | AGTTATAAGGGTGCAAGTTGTTC | 57.040 | 39.130 | 4.48 | 0.00 | 0.00 | 3.18 |
212 | 213 | 5.381757 | AGTTATAAGGGTGCAAGTTGTTCA | 58.618 | 37.500 | 4.48 | 0.00 | 0.00 | 3.18 |
214 | 215 | 6.493458 | AGTTATAAGGGTGCAAGTTGTTCAAT | 59.507 | 34.615 | 4.48 | 0.00 | 0.00 | 2.57 |
264 | 265 | 3.485463 | TTGTGGTTAGTTGAGGGACAG | 57.515 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
316 | 323 | 1.739067 | GGGGGAAACGAAGTGAGATG | 58.261 | 55.000 | 0.00 | 0.00 | 45.00 | 2.90 |
356 | 1949 | 1.997669 | ACGAGAGACTCCATTTTCGC | 58.002 | 50.000 | 10.09 | 0.00 | 0.00 | 4.70 |
555 | 2162 | 0.251916 | TCGCTGGGTTCGAATCCATT | 59.748 | 50.000 | 29.73 | 0.00 | 38.80 | 3.16 |
587 | 2194 | 3.851098 | ACTCATTAAGCAACTCGAGGAC | 58.149 | 45.455 | 18.41 | 5.41 | 0.00 | 3.85 |
608 | 2217 | 6.481644 | AGGACGAGAGAAATGATTTAAGATGC | 59.518 | 38.462 | 0.00 | 0.00 | 0.00 | 3.91 |
671 | 2280 | 1.296392 | CCATGAGAACTGGCGTCCA | 59.704 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
709 | 2318 | 5.636543 | GGATTCTTCTTTGCCAAAGTTGATG | 59.363 | 40.000 | 16.33 | 1.56 | 39.52 | 3.07 |
743 | 2354 | 2.945398 | GATGTCGCCGTGGAGAGCTC | 62.945 | 65.000 | 5.27 | 5.27 | 0.00 | 4.09 |
762 | 2373 | 2.261671 | CCGTTCAGACCTGACCCG | 59.738 | 66.667 | 0.00 | 5.45 | 39.66 | 5.28 |
765 | 2376 | 3.319198 | TTCAGACCTGACCCGCCC | 61.319 | 66.667 | 0.00 | 0.00 | 39.66 | 6.13 |
782 | 2393 | 3.795561 | GCCCGACGAAGAATCAATATG | 57.204 | 47.619 | 0.00 | 0.00 | 0.00 | 1.78 |
783 | 2394 | 2.096218 | GCCCGACGAAGAATCAATATGC | 60.096 | 50.000 | 0.00 | 0.00 | 0.00 | 3.14 |
784 | 2395 | 3.393800 | CCCGACGAAGAATCAATATGCT | 58.606 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
785 | 2396 | 4.556233 | CCCGACGAAGAATCAATATGCTA | 58.444 | 43.478 | 0.00 | 0.00 | 0.00 | 3.49 |
786 | 2397 | 4.386049 | CCCGACGAAGAATCAATATGCTAC | 59.614 | 45.833 | 0.00 | 0.00 | 0.00 | 3.58 |
787 | 2398 | 5.223382 | CCGACGAAGAATCAATATGCTACT | 58.777 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
788 | 2399 | 5.117745 | CCGACGAAGAATCAATATGCTACTG | 59.882 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
789 | 2400 | 5.687730 | CGACGAAGAATCAATATGCTACTGT | 59.312 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
790 | 2401 | 6.856426 | CGACGAAGAATCAATATGCTACTGTA | 59.144 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
791 | 2402 | 7.060059 | CGACGAAGAATCAATATGCTACTGTAG | 59.940 | 40.741 | 10.48 | 10.48 | 0.00 | 2.74 |
792 | 2403 | 7.717568 | ACGAAGAATCAATATGCTACTGTAGT | 58.282 | 34.615 | 15.71 | 0.33 | 0.00 | 2.73 |
794 | 2405 | 8.483218 | CGAAGAATCAATATGCTACTGTAGTTG | 58.517 | 37.037 | 15.71 | 11.81 | 0.00 | 3.16 |
795 | 2406 | 7.721286 | AGAATCAATATGCTACTGTAGTTGC | 57.279 | 36.000 | 15.71 | 10.76 | 44.83 | 4.17 |
803 | 2414 | 4.766404 | GCTACTGTAGTTGCAACCAATT | 57.234 | 40.909 | 25.62 | 10.07 | 44.19 | 2.32 |
804 | 2415 | 5.121221 | GCTACTGTAGTTGCAACCAATTT | 57.879 | 39.130 | 25.62 | 9.68 | 44.19 | 1.82 |
805 | 2416 | 6.249035 | GCTACTGTAGTTGCAACCAATTTA | 57.751 | 37.500 | 25.62 | 8.62 | 44.19 | 1.40 |
806 | 2417 | 6.084277 | GCTACTGTAGTTGCAACCAATTTAC | 58.916 | 40.000 | 25.62 | 19.69 | 44.19 | 2.01 |
807 | 2418 | 6.072673 | GCTACTGTAGTTGCAACCAATTTACT | 60.073 | 38.462 | 25.62 | 7.31 | 44.19 | 2.24 |
808 | 2419 | 7.118680 | GCTACTGTAGTTGCAACCAATTTACTA | 59.881 | 37.037 | 25.62 | 6.25 | 44.19 | 1.82 |
809 | 2420 | 7.996098 | ACTGTAGTTGCAACCAATTTACTAT | 57.004 | 32.000 | 25.62 | 10.34 | 32.75 | 2.12 |
810 | 2421 | 8.404107 | ACTGTAGTTGCAACCAATTTACTATT | 57.596 | 30.769 | 25.62 | 5.42 | 32.75 | 1.73 |
811 | 2422 | 8.512138 | ACTGTAGTTGCAACCAATTTACTATTC | 58.488 | 33.333 | 25.62 | 2.24 | 32.75 | 1.75 |
812 | 2423 | 7.822658 | TGTAGTTGCAACCAATTTACTATTCC | 58.177 | 34.615 | 25.62 | 0.00 | 32.75 | 3.01 |
813 | 2424 | 7.668052 | TGTAGTTGCAACCAATTTACTATTCCT | 59.332 | 33.333 | 25.62 | 4.11 | 32.75 | 3.36 |
814 | 2425 | 9.169592 | GTAGTTGCAACCAATTTACTATTCCTA | 57.830 | 33.333 | 25.62 | 3.12 | 32.75 | 2.94 |
815 | 2426 | 8.823220 | AGTTGCAACCAATTTACTATTCCTAT | 57.177 | 30.769 | 25.62 | 0.00 | 32.75 | 2.57 |
816 | 2427 | 9.914834 | AGTTGCAACCAATTTACTATTCCTATA | 57.085 | 29.630 | 25.62 | 0.00 | 32.75 | 1.31 |
832 | 2443 | 7.716799 | ATTCCTATATAGTCTGAAGGCTGAG | 57.283 | 40.000 | 8.92 | 0.00 | 0.00 | 3.35 |
856 | 2467 | 2.613595 | CGAGCTGCCATTGTTAATGCTA | 59.386 | 45.455 | 0.00 | 0.00 | 37.57 | 3.49 |
888 | 2499 | 1.377229 | GGTCAAACATCCCGGTCCA | 59.623 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
1014 | 2641 | 3.845259 | TAGATGGACGCGGTGCCC | 61.845 | 66.667 | 12.47 | 6.61 | 0.00 | 5.36 |
1113 | 2740 | 1.844003 | CAACGACTTCACCGTCACG | 59.156 | 57.895 | 0.00 | 0.00 | 39.57 | 4.35 |
1221 | 2848 | 4.308458 | CCCGTGCTCACCGTCCAA | 62.308 | 66.667 | 0.00 | 0.00 | 0.00 | 3.53 |
1253 | 2880 | 2.037381 | GTCTTCTTCTCCCCTTTCGTGT | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
1254 | 2881 | 2.299297 | TCTTCTTCTCCCCTTTCGTGTC | 59.701 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1255 | 2882 | 0.601558 | TCTTCTCCCCTTTCGTGTCG | 59.398 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1256 | 2883 | 1.005394 | TTCTCCCCTTTCGTGTCGC | 60.005 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
1257 | 2884 | 2.434359 | CTCCCCTTTCGTGTCGCC | 60.434 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
1258 | 2885 | 3.952628 | CTCCCCTTTCGTGTCGCCC | 62.953 | 68.421 | 0.00 | 0.00 | 0.00 | 6.13 |
1596 | 3223 | 3.606662 | ATCGGCAGGATCGACCGG | 61.607 | 66.667 | 16.62 | 0.00 | 46.87 | 5.28 |
1635 | 3262 | 2.670934 | CTGCTGGGCAAGAACGCT | 60.671 | 61.111 | 0.00 | 0.00 | 38.41 | 5.07 |
1671 | 3298 | 4.201679 | CCCGGCATCGACTACGCA | 62.202 | 66.667 | 0.00 | 0.00 | 39.00 | 5.24 |
1724 | 3351 | 2.092753 | AGATGCACTACCAATGACCAGG | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
1729 | 3356 | 1.279271 | ACTACCAATGACCAGGACTGC | 59.721 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
1733 | 3360 | 2.173519 | CCAATGACCAGGACTGCAATT | 58.826 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
1744 | 3371 | 3.575256 | AGGACTGCAATTCAAATGCTTGA | 59.425 | 39.130 | 0.00 | 0.00 | 44.14 | 3.02 |
1759 | 3389 | 3.554934 | TGCTTGAAGTTGGTGTCTTCAT | 58.445 | 40.909 | 8.77 | 0.00 | 46.59 | 2.57 |
1760 | 3390 | 3.565482 | TGCTTGAAGTTGGTGTCTTCATC | 59.435 | 43.478 | 8.77 | 5.70 | 46.59 | 2.92 |
1761 | 3391 | 3.364366 | GCTTGAAGTTGGTGTCTTCATCG | 60.364 | 47.826 | 8.77 | 5.56 | 46.59 | 3.84 |
1762 | 3392 | 2.766313 | TGAAGTTGGTGTCTTCATCGG | 58.234 | 47.619 | 4.56 | 0.00 | 43.88 | 4.18 |
1764 | 3394 | 2.457366 | AGTTGGTGTCTTCATCGGTC | 57.543 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1795 | 3426 | 1.751563 | GGAGGCTCCTATGGACTGC | 59.248 | 63.158 | 26.44 | 0.00 | 32.53 | 4.40 |
1801 | 3432 | 1.757118 | GCTCCTATGGACTGCTGTGTA | 59.243 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
1806 | 3437 | 2.698855 | ATGGACTGCTGTGTATGTCC | 57.301 | 50.000 | 0.00 | 0.00 | 46.53 | 4.02 |
1858 | 3499 | 6.092670 | GCTCTGCTTTTGAGTTGATACATGTA | 59.907 | 38.462 | 8.27 | 8.27 | 34.30 | 2.29 |
1865 | 3506 | 2.987149 | GAGTTGATACATGTATCGGCCG | 59.013 | 50.000 | 31.03 | 22.12 | 43.64 | 6.13 |
1867 | 3508 | 2.432206 | TGATACATGTATCGGCCGTG | 57.568 | 50.000 | 31.03 | 18.26 | 43.64 | 4.94 |
1891 | 3532 | 2.101582 | AGCCTGATATGACGTTGAGGTC | 59.898 | 50.000 | 0.00 | 0.00 | 37.45 | 3.85 |
1934 | 3575 | 1.469703 | TGATCCGCTTCAGCAATGTTG | 59.530 | 47.619 | 0.00 | 0.00 | 42.21 | 3.33 |
1974 | 3615 | 1.669795 | GCCTTTGCTTGGTCCAATTCG | 60.670 | 52.381 | 4.34 | 0.00 | 33.53 | 3.34 |
1976 | 3617 | 0.965439 | TTTGCTTGGTCCAATTCGGG | 59.035 | 50.000 | 4.34 | 0.00 | 34.36 | 5.14 |
2001 | 3642 | 1.514003 | TTTACGGCATCTTCAACGCA | 58.486 | 45.000 | 0.00 | 0.00 | 0.00 | 5.24 |
2002 | 3643 | 1.514003 | TTACGGCATCTTCAACGCAA | 58.486 | 45.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2009 | 3650 | 2.227865 | GCATCTTCAACGCAAACCCTTA | 59.772 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
2014 | 3655 | 1.334243 | TCAACGCAAACCCTTAAACCG | 59.666 | 47.619 | 0.00 | 0.00 | 0.00 | 4.44 |
2025 | 3666 | 0.707822 | CTTAAACCGTGCGCATTTGC | 59.292 | 50.000 | 15.91 | 0.00 | 37.78 | 3.68 |
2027 | 3668 | 2.479412 | TAAACCGTGCGCATTTGCCC | 62.479 | 55.000 | 15.91 | 0.00 | 37.91 | 5.36 |
2035 | 3676 | 2.126502 | GCATTTGCCCGAACCACG | 60.127 | 61.111 | 0.00 | 0.00 | 42.18 | 4.94 |
2053 | 3694 | 1.757574 | CGTGGTTCGAACGTGTTCTA | 58.242 | 50.000 | 21.34 | 0.00 | 42.86 | 2.10 |
2054 | 3695 | 2.322161 | CGTGGTTCGAACGTGTTCTAT | 58.678 | 47.619 | 21.34 | 0.00 | 42.86 | 1.98 |
2067 | 3708 | 3.679917 | CGTGTTCTATCATCCAAGCAGGT | 60.680 | 47.826 | 0.00 | 0.00 | 39.02 | 4.00 |
2081 | 3722 | 1.618640 | GCAGGTTTCACGAGCTCGAC | 61.619 | 60.000 | 40.58 | 27.11 | 43.02 | 4.20 |
2085 | 3726 | 2.558286 | TTTCACGAGCTCGACGGGT | 61.558 | 57.895 | 40.58 | 17.00 | 43.02 | 5.28 |
2089 | 3730 | 4.717629 | CGAGCTCGACGGGTGCAA | 62.718 | 66.667 | 32.06 | 0.00 | 43.02 | 4.08 |
2093 | 3734 | 2.383527 | GCTCGACGGGTGCAAAGAG | 61.384 | 63.158 | 0.00 | 0.00 | 35.27 | 2.85 |
2103 | 3744 | 4.379174 | GCAAAGAGCAAGGACGGA | 57.621 | 55.556 | 0.00 | 0.00 | 44.79 | 4.69 |
2105 | 3746 | 1.301677 | GCAAAGAGCAAGGACGGAGG | 61.302 | 60.000 | 0.00 | 0.00 | 44.79 | 4.30 |
2119 | 3760 | 3.063084 | GAGGTGACCGGAGCGAGT | 61.063 | 66.667 | 9.46 | 0.00 | 0.00 | 4.18 |
2123 | 3764 | 2.362503 | TGACCGGAGCGAGTGGAT | 60.363 | 61.111 | 9.46 | 0.00 | 0.00 | 3.41 |
2150 | 3791 | 4.162690 | GGATCCGCGGCCAACTCT | 62.163 | 66.667 | 23.51 | 0.00 | 0.00 | 3.24 |
2161 | 3802 | 1.826024 | CCAACTCTGGGGAGGATCG | 59.174 | 63.158 | 0.00 | 0.00 | 43.46 | 3.69 |
2204 | 3845 | 3.081554 | CTGCACTAGCTGGGGGTT | 58.918 | 61.111 | 0.00 | 0.00 | 42.74 | 4.11 |
2206 | 3847 | 1.841302 | CTGCACTAGCTGGGGGTTCA | 61.841 | 60.000 | 0.00 | 0.00 | 42.74 | 3.18 |
2214 | 3855 | 0.321346 | GCTGGGGGTTCAATTTGTGG | 59.679 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2216 | 3857 | 1.124477 | TGGGGGTTCAATTTGTGGCC | 61.124 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
2221 | 3862 | 1.270252 | GGTTCAATTTGTGGCCAGTGG | 60.270 | 52.381 | 5.11 | 4.20 | 0.00 | 4.00 |
2223 | 3864 | 2.079170 | TCAATTTGTGGCCAGTGGAA | 57.921 | 45.000 | 15.20 | 0.00 | 0.00 | 3.53 |
2225 | 3866 | 2.562298 | TCAATTTGTGGCCAGTGGAATC | 59.438 | 45.455 | 15.20 | 1.72 | 0.00 | 2.52 |
2228 | 3869 | 0.321564 | TTGTGGCCAGTGGAATCGAG | 60.322 | 55.000 | 15.20 | 0.00 | 0.00 | 4.04 |
2230 | 3871 | 1.021390 | GTGGCCAGTGGAATCGAGTG | 61.021 | 60.000 | 15.20 | 0.00 | 0.00 | 3.51 |
2231 | 3872 | 1.296715 | GGCCAGTGGAATCGAGTGT | 59.703 | 57.895 | 15.20 | 0.00 | 0.00 | 3.55 |
2233 | 3874 | 1.639298 | GCCAGTGGAATCGAGTGTGC | 61.639 | 60.000 | 15.20 | 0.00 | 0.00 | 4.57 |
2235 | 3876 | 1.354040 | CAGTGGAATCGAGTGTGCTC | 58.646 | 55.000 | 0.00 | 0.00 | 38.35 | 4.26 |
2256 | 3897 | 2.183300 | CGAACGGCTCGGGAATGA | 59.817 | 61.111 | 0.00 | 0.00 | 44.20 | 2.57 |
2257 | 3898 | 1.878522 | CGAACGGCTCGGGAATGAG | 60.879 | 63.158 | 0.00 | 0.00 | 44.20 | 2.90 |
2265 | 3906 | 3.005472 | CGGCTCGGGAATGAGTCTATTTA | 59.995 | 47.826 | 0.00 | 0.00 | 38.46 | 1.40 |
2270 | 3911 | 7.254852 | GCTCGGGAATGAGTCTATTTATAGAG | 58.745 | 42.308 | 0.00 | 0.00 | 39.87 | 2.43 |
2271 | 3912 | 7.121463 | GCTCGGGAATGAGTCTATTTATAGAGA | 59.879 | 40.741 | 0.00 | 0.00 | 39.87 | 3.10 |
2280 | 3921 | 6.557568 | AGTCTATTTATAGAGAGAGGGGTGG | 58.442 | 44.000 | 0.00 | 0.00 | 39.87 | 4.61 |
2282 | 3923 | 2.400467 | TTATAGAGAGAGGGGTGGCC | 57.600 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
2283 | 3924 | 0.112606 | TATAGAGAGAGGGGTGGCCG | 59.887 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2284 | 3925 | 1.656092 | ATAGAGAGAGGGGTGGCCGA | 61.656 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2287 | 3928 | 4.452733 | GAGAGGGGTGGCCGAACG | 62.453 | 72.222 | 0.00 | 0.00 | 0.00 | 3.95 |
2298 | 3939 | 4.421479 | CCGAACGCTGAGCTCCGT | 62.421 | 66.667 | 12.15 | 11.84 | 39.70 | 4.69 |
2313 | 3954 | 2.182030 | CGTCGGAGAAGGGCTGTC | 59.818 | 66.667 | 0.00 | 0.00 | 39.69 | 3.51 |
2320 | 3961 | 2.358247 | GAAGGGCTGTCGGCGAAA | 60.358 | 61.111 | 12.92 | 4.95 | 42.94 | 3.46 |
2321 | 3962 | 1.745489 | GAAGGGCTGTCGGCGAAAT | 60.745 | 57.895 | 12.92 | 0.00 | 42.94 | 2.17 |
2322 | 3963 | 1.706287 | GAAGGGCTGTCGGCGAAATC | 61.706 | 60.000 | 12.92 | 0.30 | 42.94 | 2.17 |
2332 | 3973 | 0.249238 | CGGCGAAATCAGAGGGAGAG | 60.249 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
2342 | 3983 | 4.851214 | AGGGAGAGGAGCTCGGGC | 62.851 | 72.222 | 7.83 | 0.00 | 44.91 | 6.13 |
2354 | 3995 | 1.975327 | CTCGGGCAAGTCTTGGAGA | 59.025 | 57.895 | 14.40 | 0.00 | 0.00 | 3.71 |
2355 | 3996 | 0.108424 | CTCGGGCAAGTCTTGGAGAG | 60.108 | 60.000 | 14.40 | 2.79 | 0.00 | 3.20 |
2363 | 4004 | 3.368948 | GCAAGTCTTGGAGAGGAAGTAGG | 60.369 | 52.174 | 14.40 | 0.00 | 0.00 | 3.18 |
2364 | 4005 | 2.462723 | AGTCTTGGAGAGGAAGTAGGC | 58.537 | 52.381 | 0.00 | 0.00 | 0.00 | 3.93 |
2365 | 4006 | 1.135333 | GTCTTGGAGAGGAAGTAGGCG | 59.865 | 57.143 | 0.00 | 0.00 | 0.00 | 5.52 |
2367 | 4008 | 1.407258 | CTTGGAGAGGAAGTAGGCGAG | 59.593 | 57.143 | 0.00 | 0.00 | 0.00 | 5.03 |
2369 | 4010 | 0.753848 | GGAGAGGAAGTAGGCGAGCT | 60.754 | 60.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2371 | 4012 | 0.753848 | AGAGGAAGTAGGCGAGCTCC | 60.754 | 60.000 | 8.47 | 0.47 | 0.00 | 4.70 |
2417 | 4058 | 4.769047 | TGCAGCGCACTAAGTGAA | 57.231 | 50.000 | 11.47 | 0.00 | 35.23 | 3.18 |
2423 | 4064 | 0.670546 | GCGCACTAAGTGAAGCAGGA | 60.671 | 55.000 | 0.30 | 0.00 | 38.13 | 3.86 |
2425 | 4066 | 1.082690 | GCACTAAGTGAAGCAGGAGC | 58.917 | 55.000 | 0.00 | 0.00 | 36.99 | 4.70 |
2431 | 4072 | 4.704833 | TGAAGCAGGAGCCGCACC | 62.705 | 66.667 | 0.00 | 0.00 | 43.56 | 5.01 |
2432 | 4073 | 4.704833 | GAAGCAGGAGCCGCACCA | 62.705 | 66.667 | 9.69 | 0.00 | 43.56 | 4.17 |
2433 | 4074 | 4.711949 | AAGCAGGAGCCGCACCAG | 62.712 | 66.667 | 9.69 | 2.07 | 43.56 | 4.00 |
2445 | 4086 | 2.959357 | GCACCAGCGCTCACTGTTC | 61.959 | 63.158 | 7.13 | 0.00 | 35.83 | 3.18 |
2447 | 4088 | 3.114616 | CCAGCGCTCACTGTTCCG | 61.115 | 66.667 | 7.13 | 0.00 | 35.83 | 4.30 |
2451 | 4092 | 4.680237 | CGCTCACTGTTCCGCCCA | 62.680 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
2454 | 4095 | 1.972198 | CTCACTGTTCCGCCCAGTA | 59.028 | 57.895 | 0.00 | 0.00 | 41.10 | 2.74 |
2465 | 4112 | 4.814294 | CCCAGTAGTGCCGCGTCC | 62.814 | 72.222 | 4.92 | 0.00 | 0.00 | 4.79 |
2486 | 4133 | 3.044305 | GTGCTGCCTGTCGGTGTC | 61.044 | 66.667 | 0.00 | 0.00 | 0.00 | 3.67 |
2500 | 4147 | 4.414956 | TGTCGGGGAGGGGCAGAT | 62.415 | 66.667 | 0.00 | 0.00 | 0.00 | 2.90 |
2501 | 4148 | 3.551407 | GTCGGGGAGGGGCAGATC | 61.551 | 72.222 | 0.00 | 0.00 | 0.00 | 2.75 |
2502 | 4149 | 4.088351 | TCGGGGAGGGGCAGATCA | 62.088 | 66.667 | 0.00 | 0.00 | 0.00 | 2.92 |
2515 | 4162 | 0.393537 | CAGATCAAGGCCAGGTGGAC | 60.394 | 60.000 | 5.01 | 0.00 | 46.16 | 4.02 |
2543 | 4190 | 4.767255 | GTGCTGAGTGGCGGAGGG | 62.767 | 72.222 | 0.00 | 0.00 | 34.52 | 4.30 |
2549 | 4196 | 3.672295 | GAGTGGCGGAGGGAAGCTG | 62.672 | 68.421 | 0.00 | 0.00 | 0.00 | 4.24 |
2555 | 4202 | 4.785453 | GGAGGGAAGCTGCGGTGG | 62.785 | 72.222 | 0.00 | 0.00 | 0.00 | 4.61 |
2568 | 4215 | 4.899239 | GGTGGCGCGAGGAGGATG | 62.899 | 72.222 | 12.10 | 0.00 | 0.00 | 3.51 |
2574 | 4221 | 2.107141 | GCGAGGAGGATGAACGGG | 59.893 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
2577 | 4224 | 3.447025 | GAGGAGGATGAACGGGCGG | 62.447 | 68.421 | 0.00 | 0.00 | 0.00 | 6.13 |
2598 | 4245 | 4.247380 | CAGAGAGCCCCGATGCCC | 62.247 | 72.222 | 0.00 | 0.00 | 0.00 | 5.36 |
2620 | 4267 | 2.054840 | CGCGTCGAATGCATGTCG | 60.055 | 61.111 | 18.95 | 18.95 | 39.88 | 4.35 |
2628 | 4275 | 2.094442 | TCGAATGCATGTCGAACACCTA | 60.094 | 45.455 | 22.80 | 6.87 | 44.10 | 3.08 |
2632 | 4279 | 0.721718 | GCATGTCGAACACCTAGCAC | 59.278 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2637 | 4284 | 1.741770 | CGAACACCTAGCACCCAGC | 60.742 | 63.158 | 0.00 | 0.00 | 46.19 | 4.85 |
2656 | 4303 | 2.028484 | TGGTCACCGCGTTCACTC | 59.972 | 61.111 | 4.92 | 0.00 | 0.00 | 3.51 |
2705 | 4352 | 1.927895 | CCATGTCTGGCGAGTAGTTC | 58.072 | 55.000 | 0.00 | 0.00 | 35.23 | 3.01 |
2706 | 4353 | 1.471676 | CCATGTCTGGCGAGTAGTTCC | 60.472 | 57.143 | 0.00 | 0.00 | 35.23 | 3.62 |
2707 | 4354 | 1.478510 | CATGTCTGGCGAGTAGTTCCT | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
2708 | 4355 | 1.629043 | TGTCTGGCGAGTAGTTCCTT | 58.371 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2709 | 4356 | 1.544691 | TGTCTGGCGAGTAGTTCCTTC | 59.455 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
2710 | 4357 | 1.544691 | GTCTGGCGAGTAGTTCCTTCA | 59.455 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
2711 | 4358 | 2.029290 | GTCTGGCGAGTAGTTCCTTCAA | 60.029 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2712 | 4359 | 2.029290 | TCTGGCGAGTAGTTCCTTCAAC | 60.029 | 50.000 | 0.00 | 0.00 | 34.86 | 3.18 |
2713 | 4360 | 1.336517 | TGGCGAGTAGTTCCTTCAACG | 60.337 | 52.381 | 0.00 | 0.00 | 40.32 | 4.10 |
2714 | 4361 | 1.336609 | GGCGAGTAGTTCCTTCAACGT | 60.337 | 52.381 | 0.00 | 0.00 | 40.32 | 3.99 |
2715 | 4362 | 1.719780 | GCGAGTAGTTCCTTCAACGTG | 59.280 | 52.381 | 0.00 | 0.00 | 40.32 | 4.49 |
2716 | 4363 | 2.325761 | CGAGTAGTTCCTTCAACGTGG | 58.674 | 52.381 | 0.00 | 0.00 | 40.32 | 4.94 |
2717 | 4364 | 2.685100 | GAGTAGTTCCTTCAACGTGGG | 58.315 | 52.381 | 0.00 | 0.00 | 40.32 | 4.61 |
2718 | 4365 | 1.346722 | AGTAGTTCCTTCAACGTGGGG | 59.653 | 52.381 | 0.00 | 0.00 | 40.32 | 4.96 |
2719 | 4366 | 0.035739 | TAGTTCCTTCAACGTGGGGC | 59.964 | 55.000 | 0.00 | 0.00 | 40.32 | 5.80 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 2.288030 | ACAAACTACGTGTCCTTCTCGG | 60.288 | 50.000 | 0.00 | 0.00 | 37.36 | 4.63 |
1 | 2 | 3.009301 | ACAAACTACGTGTCCTTCTCG | 57.991 | 47.619 | 0.00 | 0.00 | 38.71 | 4.04 |
2 | 3 | 3.059800 | GCAACAAACTACGTGTCCTTCTC | 60.060 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
3 | 4 | 2.870411 | GCAACAAACTACGTGTCCTTCT | 59.130 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
4 | 5 | 2.870411 | AGCAACAAACTACGTGTCCTTC | 59.130 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
5 | 6 | 2.612212 | CAGCAACAAACTACGTGTCCTT | 59.388 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
6 | 7 | 2.210116 | CAGCAACAAACTACGTGTCCT | 58.790 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
7 | 8 | 1.937899 | ACAGCAACAAACTACGTGTCC | 59.062 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
8 | 9 | 2.605818 | TGACAGCAACAAACTACGTGTC | 59.394 | 45.455 | 0.00 | 0.00 | 34.68 | 3.67 |
9 | 10 | 2.607635 | CTGACAGCAACAAACTACGTGT | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 4.49 |
10 | 11 | 2.032894 | CCTGACAGCAACAAACTACGTG | 60.033 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
11 | 12 | 2.210116 | CCTGACAGCAACAAACTACGT | 58.790 | 47.619 | 0.00 | 0.00 | 0.00 | 3.57 |
12 | 13 | 1.531149 | CCCTGACAGCAACAAACTACG | 59.469 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
13 | 14 | 2.808543 | CTCCCTGACAGCAACAAACTAC | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
14 | 15 | 2.703536 | TCTCCCTGACAGCAACAAACTA | 59.296 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
15 | 16 | 1.490490 | TCTCCCTGACAGCAACAAACT | 59.510 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
16 | 17 | 1.876156 | CTCTCCCTGACAGCAACAAAC | 59.124 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
17 | 18 | 1.768275 | TCTCTCCCTGACAGCAACAAA | 59.232 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
18 | 19 | 1.423584 | TCTCTCCCTGACAGCAACAA | 58.576 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
19 | 20 | 1.423584 | TTCTCTCCCTGACAGCAACA | 58.576 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
20 | 21 | 2.421619 | CTTTCTCTCCCTGACAGCAAC | 58.578 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
21 | 22 | 1.349026 | CCTTTCTCTCCCTGACAGCAA | 59.651 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
22 | 23 | 0.979665 | CCTTTCTCTCCCTGACAGCA | 59.020 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
23 | 24 | 0.392327 | GCCTTTCTCTCCCTGACAGC | 60.392 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
24 | 25 | 1.206849 | GAGCCTTTCTCTCCCTGACAG | 59.793 | 57.143 | 0.00 | 0.00 | 38.78 | 3.51 |
25 | 26 | 1.270907 | GAGCCTTTCTCTCCCTGACA | 58.729 | 55.000 | 0.00 | 0.00 | 38.78 | 3.58 |
26 | 27 | 1.270907 | TGAGCCTTTCTCTCCCTGAC | 58.729 | 55.000 | 0.00 | 0.00 | 42.38 | 3.51 |
27 | 28 | 1.625818 | GTTGAGCCTTTCTCTCCCTGA | 59.374 | 52.381 | 0.00 | 0.00 | 42.38 | 3.86 |
28 | 29 | 1.627834 | AGTTGAGCCTTTCTCTCCCTG | 59.372 | 52.381 | 0.00 | 0.00 | 42.38 | 4.45 |
29 | 30 | 2.037385 | AGTTGAGCCTTTCTCTCCCT | 57.963 | 50.000 | 0.00 | 0.00 | 42.38 | 4.20 |
30 | 31 | 4.495690 | AATAGTTGAGCCTTTCTCTCCC | 57.504 | 45.455 | 0.00 | 0.00 | 42.38 | 4.30 |
31 | 32 | 5.124617 | CCAAAATAGTTGAGCCTTTCTCTCC | 59.875 | 44.000 | 0.00 | 0.00 | 42.38 | 3.71 |
32 | 33 | 5.940470 | TCCAAAATAGTTGAGCCTTTCTCTC | 59.060 | 40.000 | 0.00 | 0.00 | 42.38 | 3.20 |
33 | 34 | 5.707764 | GTCCAAAATAGTTGAGCCTTTCTCT | 59.292 | 40.000 | 0.00 | 0.00 | 42.38 | 3.10 |
34 | 35 | 5.106118 | GGTCCAAAATAGTTGAGCCTTTCTC | 60.106 | 44.000 | 0.00 | 0.00 | 42.23 | 2.87 |
35 | 36 | 4.767409 | GGTCCAAAATAGTTGAGCCTTTCT | 59.233 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
36 | 37 | 4.522789 | TGGTCCAAAATAGTTGAGCCTTTC | 59.477 | 41.667 | 0.00 | 0.00 | 0.00 | 2.62 |
37 | 38 | 4.479158 | TGGTCCAAAATAGTTGAGCCTTT | 58.521 | 39.130 | 0.00 | 0.00 | 0.00 | 3.11 |
38 | 39 | 4.112634 | TGGTCCAAAATAGTTGAGCCTT | 57.887 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
39 | 40 | 3.806949 | TGGTCCAAAATAGTTGAGCCT | 57.193 | 42.857 | 0.00 | 0.00 | 0.00 | 4.58 |
40 | 41 | 4.381932 | CCATTGGTCCAAAATAGTTGAGCC | 60.382 | 45.833 | 8.75 | 0.00 | 0.00 | 4.70 |
41 | 42 | 4.220602 | ACCATTGGTCCAAAATAGTTGAGC | 59.779 | 41.667 | 8.75 | 0.00 | 0.00 | 4.26 |
42 | 43 | 5.476599 | TCACCATTGGTCCAAAATAGTTGAG | 59.523 | 40.000 | 8.75 | 0.00 | 31.02 | 3.02 |
43 | 44 | 5.242838 | GTCACCATTGGTCCAAAATAGTTGA | 59.757 | 40.000 | 8.75 | 3.37 | 31.02 | 3.18 |
44 | 45 | 5.010516 | TGTCACCATTGGTCCAAAATAGTTG | 59.989 | 40.000 | 8.75 | 0.85 | 31.02 | 3.16 |
45 | 46 | 5.144100 | TGTCACCATTGGTCCAAAATAGTT | 58.856 | 37.500 | 8.75 | 0.00 | 31.02 | 2.24 |
46 | 47 | 4.735369 | TGTCACCATTGGTCCAAAATAGT | 58.265 | 39.130 | 8.75 | 1.01 | 31.02 | 2.12 |
47 | 48 | 5.920193 | ATGTCACCATTGGTCCAAAATAG | 57.080 | 39.130 | 8.75 | 0.36 | 31.02 | 1.73 |
48 | 49 | 6.726379 | TCTATGTCACCATTGGTCCAAAATA | 58.274 | 36.000 | 8.75 | 0.00 | 31.02 | 1.40 |
49 | 50 | 5.579047 | TCTATGTCACCATTGGTCCAAAAT | 58.421 | 37.500 | 8.75 | 0.00 | 31.02 | 1.82 |
50 | 51 | 4.991776 | TCTATGTCACCATTGGTCCAAAA | 58.008 | 39.130 | 8.75 | 0.00 | 31.02 | 2.44 |
51 | 52 | 4.649267 | TCTATGTCACCATTGGTCCAAA | 57.351 | 40.909 | 8.75 | 0.00 | 31.02 | 3.28 |
52 | 53 | 4.649267 | TTCTATGTCACCATTGGTCCAA | 57.351 | 40.909 | 6.80 | 6.80 | 31.02 | 3.53 |
53 | 54 | 4.288366 | TCTTTCTATGTCACCATTGGTCCA | 59.712 | 41.667 | 5.04 | 6.28 | 31.02 | 4.02 |
54 | 55 | 4.843728 | TCTTTCTATGTCACCATTGGTCC | 58.156 | 43.478 | 5.04 | 0.00 | 31.02 | 4.46 |
55 | 56 | 4.333926 | GCTCTTTCTATGTCACCATTGGTC | 59.666 | 45.833 | 5.04 | 0.00 | 31.02 | 4.02 |
56 | 57 | 4.265073 | GCTCTTTCTATGTCACCATTGGT | 58.735 | 43.478 | 1.37 | 1.37 | 35.62 | 3.67 |
57 | 58 | 3.310774 | CGCTCTTTCTATGTCACCATTGG | 59.689 | 47.826 | 0.00 | 0.00 | 32.29 | 3.16 |
58 | 59 | 4.183865 | TCGCTCTTTCTATGTCACCATTG | 58.816 | 43.478 | 0.00 | 0.00 | 32.29 | 2.82 |
59 | 60 | 4.160439 | TCTCGCTCTTTCTATGTCACCATT | 59.840 | 41.667 | 0.00 | 0.00 | 32.29 | 3.16 |
60 | 61 | 3.701542 | TCTCGCTCTTTCTATGTCACCAT | 59.298 | 43.478 | 0.00 | 0.00 | 34.97 | 3.55 |
61 | 62 | 3.089284 | TCTCGCTCTTTCTATGTCACCA | 58.911 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
62 | 63 | 3.378742 | TCTCTCGCTCTTTCTATGTCACC | 59.621 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
63 | 64 | 4.624336 | TCTCTCGCTCTTTCTATGTCAC | 57.376 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
64 | 65 | 5.644977 | TTTCTCTCGCTCTTTCTATGTCA | 57.355 | 39.130 | 0.00 | 0.00 | 0.00 | 3.58 |
65 | 66 | 5.518487 | CCTTTTCTCTCGCTCTTTCTATGTC | 59.482 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
66 | 67 | 5.186021 | TCCTTTTCTCTCGCTCTTTCTATGT | 59.814 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
67 | 68 | 5.655488 | TCCTTTTCTCTCGCTCTTTCTATG | 58.345 | 41.667 | 0.00 | 0.00 | 0.00 | 2.23 |
68 | 69 | 5.923733 | TCCTTTTCTCTCGCTCTTTCTAT | 57.076 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
69 | 70 | 5.723672 | TTCCTTTTCTCTCGCTCTTTCTA | 57.276 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
70 | 71 | 4.608948 | TTCCTTTTCTCTCGCTCTTTCT | 57.391 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
71 | 72 | 5.871465 | ATTTCCTTTTCTCTCGCTCTTTC | 57.129 | 39.130 | 0.00 | 0.00 | 0.00 | 2.62 |
72 | 73 | 5.765182 | TGAATTTCCTTTTCTCTCGCTCTTT | 59.235 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
73 | 74 | 5.308825 | TGAATTTCCTTTTCTCTCGCTCTT | 58.691 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
74 | 75 | 4.899502 | TGAATTTCCTTTTCTCTCGCTCT | 58.100 | 39.130 | 0.00 | 0.00 | 0.00 | 4.09 |
75 | 76 | 4.693095 | ACTGAATTTCCTTTTCTCTCGCTC | 59.307 | 41.667 | 0.00 | 0.00 | 0.00 | 5.03 |
76 | 77 | 4.453819 | CACTGAATTTCCTTTTCTCTCGCT | 59.546 | 41.667 | 0.00 | 0.00 | 0.00 | 4.93 |
77 | 78 | 4.716943 | CACTGAATTTCCTTTTCTCTCGC | 58.283 | 43.478 | 0.00 | 0.00 | 0.00 | 5.03 |
78 | 79 | 4.214119 | TGCACTGAATTTCCTTTTCTCTCG | 59.786 | 41.667 | 0.00 | 0.00 | 0.00 | 4.04 |
79 | 80 | 5.695851 | TGCACTGAATTTCCTTTTCTCTC | 57.304 | 39.130 | 0.00 | 0.00 | 0.00 | 3.20 |
80 | 81 | 5.829924 | TCTTGCACTGAATTTCCTTTTCTCT | 59.170 | 36.000 | 0.00 | 0.00 | 0.00 | 3.10 |
81 | 82 | 6.076981 | TCTTGCACTGAATTTCCTTTTCTC | 57.923 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
82 | 83 | 6.661304 | ATCTTGCACTGAATTTCCTTTTCT | 57.339 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
83 | 84 | 6.925165 | TCAATCTTGCACTGAATTTCCTTTTC | 59.075 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
84 | 85 | 6.819284 | TCAATCTTGCACTGAATTTCCTTTT | 58.181 | 32.000 | 0.00 | 0.00 | 0.00 | 2.27 |
85 | 86 | 6.409524 | TCAATCTTGCACTGAATTTCCTTT | 57.590 | 33.333 | 0.00 | 0.00 | 0.00 | 3.11 |
86 | 87 | 6.266103 | TCTTCAATCTTGCACTGAATTTCCTT | 59.734 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
87 | 88 | 5.771666 | TCTTCAATCTTGCACTGAATTTCCT | 59.228 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
88 | 89 | 6.017400 | TCTTCAATCTTGCACTGAATTTCC | 57.983 | 37.500 | 0.00 | 0.00 | 0.00 | 3.13 |
89 | 90 | 7.650903 | AGTTTCTTCAATCTTGCACTGAATTTC | 59.349 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
90 | 91 | 7.495055 | AGTTTCTTCAATCTTGCACTGAATTT | 58.505 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
91 | 92 | 7.047460 | AGTTTCTTCAATCTTGCACTGAATT | 57.953 | 32.000 | 0.00 | 0.00 | 0.00 | 2.17 |
92 | 93 | 6.645790 | AGTTTCTTCAATCTTGCACTGAAT | 57.354 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
93 | 94 | 7.750229 | ATAGTTTCTTCAATCTTGCACTGAA | 57.250 | 32.000 | 0.00 | 0.00 | 0.00 | 3.02 |
94 | 95 | 7.587629 | CAATAGTTTCTTCAATCTTGCACTGA | 58.412 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
95 | 96 | 6.307318 | GCAATAGTTTCTTCAATCTTGCACTG | 59.693 | 38.462 | 0.00 | 0.00 | 0.00 | 3.66 |
96 | 97 | 6.385033 | GCAATAGTTTCTTCAATCTTGCACT | 58.615 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
97 | 98 | 5.574443 | GGCAATAGTTTCTTCAATCTTGCAC | 59.426 | 40.000 | 0.00 | 0.00 | 33.81 | 4.57 |
98 | 99 | 5.243507 | TGGCAATAGTTTCTTCAATCTTGCA | 59.756 | 36.000 | 0.00 | 0.00 | 33.81 | 4.08 |
99 | 100 | 5.713025 | TGGCAATAGTTTCTTCAATCTTGC | 58.287 | 37.500 | 0.00 | 0.00 | 0.00 | 4.01 |
100 | 101 | 7.318141 | ACATGGCAATAGTTTCTTCAATCTTG | 58.682 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
101 | 102 | 7.472334 | ACATGGCAATAGTTTCTTCAATCTT | 57.528 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
102 | 103 | 7.318141 | CAACATGGCAATAGTTTCTTCAATCT | 58.682 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
103 | 104 | 6.532657 | CCAACATGGCAATAGTTTCTTCAATC | 59.467 | 38.462 | 0.00 | 0.00 | 0.00 | 2.67 |
104 | 105 | 6.211184 | TCCAACATGGCAATAGTTTCTTCAAT | 59.789 | 34.615 | 0.00 | 0.00 | 37.47 | 2.57 |
105 | 106 | 5.538053 | TCCAACATGGCAATAGTTTCTTCAA | 59.462 | 36.000 | 0.00 | 0.00 | 37.47 | 2.69 |
106 | 107 | 5.048083 | GTCCAACATGGCAATAGTTTCTTCA | 60.048 | 40.000 | 0.00 | 0.00 | 37.47 | 3.02 |
107 | 108 | 5.402398 | GTCCAACATGGCAATAGTTTCTTC | 58.598 | 41.667 | 0.00 | 0.00 | 37.47 | 2.87 |
108 | 109 | 4.220602 | GGTCCAACATGGCAATAGTTTCTT | 59.779 | 41.667 | 0.00 | 0.00 | 37.47 | 2.52 |
109 | 110 | 3.763897 | GGTCCAACATGGCAATAGTTTCT | 59.236 | 43.478 | 0.00 | 0.00 | 37.47 | 2.52 |
110 | 111 | 3.509575 | TGGTCCAACATGGCAATAGTTTC | 59.490 | 43.478 | 0.00 | 0.00 | 37.47 | 2.78 |
111 | 112 | 3.258123 | GTGGTCCAACATGGCAATAGTTT | 59.742 | 43.478 | 0.00 | 0.00 | 37.47 | 2.66 |
112 | 113 | 2.825532 | GTGGTCCAACATGGCAATAGTT | 59.174 | 45.455 | 0.00 | 0.00 | 37.47 | 2.24 |
113 | 114 | 2.224992 | TGTGGTCCAACATGGCAATAGT | 60.225 | 45.455 | 0.00 | 0.00 | 37.47 | 2.12 |
114 | 115 | 2.445427 | TGTGGTCCAACATGGCAATAG | 58.555 | 47.619 | 0.00 | 0.00 | 37.47 | 1.73 |
115 | 116 | 2.593925 | TGTGGTCCAACATGGCAATA | 57.406 | 45.000 | 0.00 | 0.00 | 37.47 | 1.90 |
116 | 117 | 1.826720 | GATGTGGTCCAACATGGCAAT | 59.173 | 47.619 | 10.53 | 0.00 | 40.87 | 3.56 |
117 | 118 | 1.255882 | GATGTGGTCCAACATGGCAA | 58.744 | 50.000 | 10.53 | 0.00 | 40.87 | 4.52 |
118 | 119 | 0.112025 | TGATGTGGTCCAACATGGCA | 59.888 | 50.000 | 10.53 | 0.00 | 40.87 | 4.92 |
119 | 120 | 1.406539 | GATGATGTGGTCCAACATGGC | 59.593 | 52.381 | 10.53 | 1.00 | 40.87 | 4.40 |
120 | 121 | 2.725637 | TGATGATGTGGTCCAACATGG | 58.274 | 47.619 | 10.53 | 0.00 | 40.87 | 3.66 |
121 | 122 | 4.787260 | TTTGATGATGTGGTCCAACATG | 57.213 | 40.909 | 10.53 | 0.00 | 40.87 | 3.21 |
122 | 123 | 7.322664 | GTTTATTTGATGATGTGGTCCAACAT | 58.677 | 34.615 | 0.00 | 0.00 | 43.47 | 2.71 |
123 | 124 | 6.295011 | GGTTTATTTGATGATGTGGTCCAACA | 60.295 | 38.462 | 0.00 | 0.00 | 0.00 | 3.33 |
124 | 125 | 6.099341 | GGTTTATTTGATGATGTGGTCCAAC | 58.901 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
125 | 126 | 5.105957 | CGGTTTATTTGATGATGTGGTCCAA | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
126 | 127 | 4.397730 | CGGTTTATTTGATGATGTGGTCCA | 59.602 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
127 | 128 | 4.733523 | GCGGTTTATTTGATGATGTGGTCC | 60.734 | 45.833 | 0.00 | 0.00 | 0.00 | 4.46 |
128 | 129 | 4.096382 | AGCGGTTTATTTGATGATGTGGTC | 59.904 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
129 | 130 | 4.016444 | AGCGGTTTATTTGATGATGTGGT | 58.984 | 39.130 | 0.00 | 0.00 | 0.00 | 4.16 |
130 | 131 | 4.637483 | AGCGGTTTATTTGATGATGTGG | 57.363 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
131 | 132 | 5.639757 | TGAAGCGGTTTATTTGATGATGTG | 58.360 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
132 | 133 | 5.415701 | ACTGAAGCGGTTTATTTGATGATGT | 59.584 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
133 | 134 | 5.883661 | ACTGAAGCGGTTTATTTGATGATG | 58.116 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
134 | 135 | 6.150976 | TGAACTGAAGCGGTTTATTTGATGAT | 59.849 | 34.615 | 0.00 | 0.00 | 32.62 | 2.45 |
135 | 136 | 5.471797 | TGAACTGAAGCGGTTTATTTGATGA | 59.528 | 36.000 | 0.00 | 0.00 | 32.62 | 2.92 |
136 | 137 | 5.698832 | TGAACTGAAGCGGTTTATTTGATG | 58.301 | 37.500 | 0.00 | 0.00 | 32.62 | 3.07 |
137 | 138 | 5.106157 | CCTGAACTGAAGCGGTTTATTTGAT | 60.106 | 40.000 | 0.00 | 0.00 | 32.62 | 2.57 |
138 | 139 | 4.215399 | CCTGAACTGAAGCGGTTTATTTGA | 59.785 | 41.667 | 0.00 | 0.00 | 32.62 | 2.69 |
139 | 140 | 4.475944 | CCTGAACTGAAGCGGTTTATTTG | 58.524 | 43.478 | 0.00 | 0.00 | 32.62 | 2.32 |
140 | 141 | 3.506067 | CCCTGAACTGAAGCGGTTTATTT | 59.494 | 43.478 | 0.00 | 0.00 | 32.62 | 1.40 |
141 | 142 | 3.081804 | CCCTGAACTGAAGCGGTTTATT | 58.918 | 45.455 | 0.00 | 0.00 | 32.62 | 1.40 |
142 | 143 | 2.618045 | CCCCTGAACTGAAGCGGTTTAT | 60.618 | 50.000 | 0.00 | 0.00 | 32.62 | 1.40 |
143 | 144 | 1.271163 | CCCCTGAACTGAAGCGGTTTA | 60.271 | 52.381 | 0.00 | 0.00 | 32.62 | 2.01 |
144 | 145 | 0.537371 | CCCCTGAACTGAAGCGGTTT | 60.537 | 55.000 | 0.00 | 0.00 | 32.62 | 3.27 |
145 | 146 | 1.073199 | CCCCTGAACTGAAGCGGTT | 59.927 | 57.895 | 0.00 | 0.00 | 35.46 | 4.44 |
146 | 147 | 1.831652 | CTCCCCTGAACTGAAGCGGT | 61.832 | 60.000 | 0.00 | 0.00 | 0.00 | 5.68 |
147 | 148 | 1.078848 | CTCCCCTGAACTGAAGCGG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
148 | 149 | 1.078848 | CCTCCCCTGAACTGAAGCG | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.68 |
149 | 150 | 0.035915 | GTCCTCCCCTGAACTGAAGC | 60.036 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
150 | 151 | 0.615850 | GGTCCTCCCCTGAACTGAAG | 59.384 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
151 | 152 | 0.104672 | TGGTCCTCCCCTGAACTGAA | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
152 | 153 | 0.104672 | TTGGTCCTCCCCTGAACTGA | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
153 | 154 | 0.771127 | TTTGGTCCTCCCCTGAACTG | 59.229 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
154 | 155 | 0.771755 | GTTTGGTCCTCCCCTGAACT | 59.228 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
155 | 156 | 0.476771 | TGTTTGGTCCTCCCCTGAAC | 59.523 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
156 | 157 | 1.075374 | CATGTTTGGTCCTCCCCTGAA | 59.925 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
157 | 158 | 0.698238 | CATGTTTGGTCCTCCCCTGA | 59.302 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
158 | 159 | 0.405585 | ACATGTTTGGTCCTCCCCTG | 59.594 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
159 | 160 | 0.698818 | GACATGTTTGGTCCTCCCCT | 59.301 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
160 | 161 | 0.698818 | AGACATGTTTGGTCCTCCCC | 59.301 | 55.000 | 0.00 | 0.00 | 35.89 | 4.81 |
161 | 162 | 1.614317 | CCAGACATGTTTGGTCCTCCC | 60.614 | 57.143 | 24.01 | 0.00 | 35.89 | 4.30 |
162 | 163 | 1.826385 | CCAGACATGTTTGGTCCTCC | 58.174 | 55.000 | 24.01 | 0.00 | 35.89 | 4.30 |
163 | 164 | 1.168714 | GCCAGACATGTTTGGTCCTC | 58.831 | 55.000 | 30.11 | 14.32 | 37.20 | 3.71 |
164 | 165 | 0.773644 | AGCCAGACATGTTTGGTCCT | 59.226 | 50.000 | 30.11 | 19.65 | 37.20 | 3.85 |
165 | 166 | 1.620822 | AAGCCAGACATGTTTGGTCC | 58.379 | 50.000 | 30.11 | 17.98 | 37.20 | 4.46 |
166 | 167 | 4.072131 | TCTTAAGCCAGACATGTTTGGTC | 58.928 | 43.478 | 30.11 | 23.04 | 37.20 | 4.02 |
167 | 168 | 4.098914 | TCTTAAGCCAGACATGTTTGGT | 57.901 | 40.909 | 30.11 | 17.66 | 37.20 | 3.67 |
168 | 169 | 4.520492 | ACTTCTTAAGCCAGACATGTTTGG | 59.480 | 41.667 | 27.08 | 27.08 | 37.85 | 3.28 |
169 | 170 | 5.695851 | ACTTCTTAAGCCAGACATGTTTG | 57.304 | 39.130 | 9.38 | 9.38 | 0.00 | 2.93 |
170 | 171 | 9.515226 | TTATAACTTCTTAAGCCAGACATGTTT | 57.485 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
171 | 172 | 9.167311 | CTTATAACTTCTTAAGCCAGACATGTT | 57.833 | 33.333 | 0.00 | 3.37 | 0.00 | 2.71 |
172 | 173 | 7.770897 | CCTTATAACTTCTTAAGCCAGACATGT | 59.229 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
173 | 174 | 7.227512 | CCCTTATAACTTCTTAAGCCAGACATG | 59.772 | 40.741 | 8.15 | 0.00 | 0.00 | 3.21 |
174 | 175 | 7.092399 | ACCCTTATAACTTCTTAAGCCAGACAT | 60.092 | 37.037 | 8.15 | 4.26 | 0.00 | 3.06 |
175 | 176 | 6.214819 | ACCCTTATAACTTCTTAAGCCAGACA | 59.785 | 38.462 | 8.15 | 0.00 | 0.00 | 3.41 |
176 | 177 | 6.539103 | CACCCTTATAACTTCTTAAGCCAGAC | 59.461 | 42.308 | 8.15 | 0.00 | 0.00 | 3.51 |
177 | 178 | 6.650120 | CACCCTTATAACTTCTTAAGCCAGA | 58.350 | 40.000 | 8.15 | 0.00 | 0.00 | 3.86 |
178 | 179 | 5.297029 | GCACCCTTATAACTTCTTAAGCCAG | 59.703 | 44.000 | 0.00 | 0.00 | 0.00 | 4.85 |
179 | 180 | 5.190677 | GCACCCTTATAACTTCTTAAGCCA | 58.809 | 41.667 | 0.00 | 0.00 | 0.00 | 4.75 |
180 | 181 | 5.190677 | TGCACCCTTATAACTTCTTAAGCC | 58.809 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
181 | 182 | 6.374613 | ACTTGCACCCTTATAACTTCTTAAGC | 59.625 | 38.462 | 0.00 | 0.00 | 0.00 | 3.09 |
182 | 183 | 7.923414 | ACTTGCACCCTTATAACTTCTTAAG | 57.077 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
183 | 184 | 7.722285 | ACAACTTGCACCCTTATAACTTCTTAA | 59.278 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
184 | 185 | 7.228590 | ACAACTTGCACCCTTATAACTTCTTA | 58.771 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
185 | 186 | 6.068670 | ACAACTTGCACCCTTATAACTTCTT | 58.931 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
186 | 187 | 5.631119 | ACAACTTGCACCCTTATAACTTCT | 58.369 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
187 | 188 | 5.959618 | ACAACTTGCACCCTTATAACTTC | 57.040 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
188 | 189 | 5.830991 | TGAACAACTTGCACCCTTATAACTT | 59.169 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
189 | 190 | 5.381757 | TGAACAACTTGCACCCTTATAACT | 58.618 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
190 | 191 | 5.699097 | TGAACAACTTGCACCCTTATAAC | 57.301 | 39.130 | 0.00 | 0.00 | 0.00 | 1.89 |
191 | 192 | 6.909550 | ATTGAACAACTTGCACCCTTATAA | 57.090 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
192 | 193 | 6.909550 | AATTGAACAACTTGCACCCTTATA | 57.090 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
193 | 194 | 5.806654 | AATTGAACAACTTGCACCCTTAT | 57.193 | 34.783 | 0.00 | 0.00 | 0.00 | 1.73 |
199 | 200 | 7.755582 | ACTCTAAAAATTGAACAACTTGCAC | 57.244 | 32.000 | 0.00 | 0.00 | 0.00 | 4.57 |
245 | 246 | 2.684943 | TCTGTCCCTCAACTAACCACA | 58.315 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
249 | 250 | 6.937392 | AGTCTATTTCTGTCCCTCAACTAAC | 58.063 | 40.000 | 0.00 | 0.00 | 0.00 | 2.34 |
264 | 265 | 9.026074 | CATCGTAGAAAGAGGAAAGTCTATTTC | 57.974 | 37.037 | 4.42 | 4.42 | 43.58 | 2.17 |
356 | 1949 | 1.153086 | CAGAAATGGGCCCTCTCGG | 60.153 | 63.158 | 25.70 | 13.25 | 0.00 | 4.63 |
386 | 1979 | 3.465122 | CGACCTCCGGTTTATTGTTTG | 57.535 | 47.619 | 0.00 | 0.00 | 35.25 | 2.93 |
555 | 2162 | 8.677148 | AGTTGCTTAATGAGTAAACAAAGAGA | 57.323 | 30.769 | 0.00 | 0.00 | 31.29 | 3.10 |
587 | 2194 | 8.900511 | TTTTGCATCTTAAATCATTTCTCTCG | 57.099 | 30.769 | 0.00 | 0.00 | 0.00 | 4.04 |
625 | 2234 | 2.182030 | GAAGCAGGGGAGTCGTCG | 59.818 | 66.667 | 0.00 | 0.00 | 0.00 | 5.12 |
743 | 2354 | 2.663196 | GGTCAGGTCTGAACGGGG | 59.337 | 66.667 | 1.86 | 0.00 | 41.85 | 5.73 |
762 | 2373 | 2.096218 | GCATATTGATTCTTCGTCGGGC | 60.096 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
765 | 2376 | 5.687730 | ACAGTAGCATATTGATTCTTCGTCG | 59.312 | 40.000 | 0.00 | 0.00 | 32.04 | 5.12 |
780 | 2391 | 3.417069 | TGGTTGCAACTACAGTAGCAT | 57.583 | 42.857 | 27.64 | 0.00 | 36.80 | 3.79 |
781 | 2392 | 2.920724 | TGGTTGCAACTACAGTAGCA | 57.079 | 45.000 | 27.64 | 12.54 | 34.79 | 3.49 |
782 | 2393 | 4.766404 | AATTGGTTGCAACTACAGTAGC | 57.234 | 40.909 | 27.64 | 10.07 | 0.00 | 3.58 |
783 | 2394 | 7.435068 | AGTAAATTGGTTGCAACTACAGTAG | 57.565 | 36.000 | 27.64 | 6.00 | 0.00 | 2.57 |
784 | 2395 | 9.509956 | AATAGTAAATTGGTTGCAACTACAGTA | 57.490 | 29.630 | 27.64 | 14.02 | 0.00 | 2.74 |
785 | 2396 | 7.996098 | ATAGTAAATTGGTTGCAACTACAGT | 57.004 | 32.000 | 27.64 | 12.97 | 0.00 | 3.55 |
786 | 2397 | 7.968405 | GGAATAGTAAATTGGTTGCAACTACAG | 59.032 | 37.037 | 27.64 | 0.00 | 0.00 | 2.74 |
787 | 2398 | 7.668052 | AGGAATAGTAAATTGGTTGCAACTACA | 59.332 | 33.333 | 27.64 | 16.11 | 0.00 | 2.74 |
788 | 2399 | 8.051901 | AGGAATAGTAAATTGGTTGCAACTAC | 57.948 | 34.615 | 27.64 | 20.46 | 0.00 | 2.73 |
789 | 2400 | 9.914834 | ATAGGAATAGTAAATTGGTTGCAACTA | 57.085 | 29.630 | 27.64 | 20.61 | 0.00 | 2.24 |
790 | 2401 | 8.823220 | ATAGGAATAGTAAATTGGTTGCAACT | 57.177 | 30.769 | 27.64 | 11.27 | 0.00 | 3.16 |
804 | 2415 | 9.688091 | CAGCCTTCAGACTATATAGGAATAGTA | 57.312 | 37.037 | 14.25 | 0.00 | 41.65 | 1.82 |
805 | 2416 | 8.394822 | TCAGCCTTCAGACTATATAGGAATAGT | 58.605 | 37.037 | 14.25 | 0.00 | 43.72 | 2.12 |
806 | 2417 | 8.815565 | TCAGCCTTCAGACTATATAGGAATAG | 57.184 | 38.462 | 14.25 | 4.86 | 35.86 | 1.73 |
807 | 2418 | 7.836685 | CCTCAGCCTTCAGACTATATAGGAATA | 59.163 | 40.741 | 14.25 | 0.00 | 0.00 | 1.75 |
808 | 2419 | 6.667414 | CCTCAGCCTTCAGACTATATAGGAAT | 59.333 | 42.308 | 14.25 | 0.00 | 0.00 | 3.01 |
809 | 2420 | 6.013379 | CCTCAGCCTTCAGACTATATAGGAA | 58.987 | 44.000 | 14.25 | 7.12 | 0.00 | 3.36 |
810 | 2421 | 5.575157 | CCTCAGCCTTCAGACTATATAGGA | 58.425 | 45.833 | 14.25 | 0.00 | 0.00 | 2.94 |
811 | 2422 | 4.159506 | GCCTCAGCCTTCAGACTATATAGG | 59.840 | 50.000 | 14.25 | 0.00 | 0.00 | 2.57 |
812 | 2423 | 5.323371 | GCCTCAGCCTTCAGACTATATAG | 57.677 | 47.826 | 8.27 | 8.27 | 0.00 | 1.31 |
856 | 2467 | 2.113986 | GACCAGCTTGGCACCACT | 59.886 | 61.111 | 0.00 | 0.00 | 42.67 | 4.00 |
888 | 2499 | 1.145119 | GTCTTCCCCTGTCCTGGTTTT | 59.855 | 52.381 | 0.00 | 0.00 | 0.00 | 2.43 |
911 | 2526 | 4.193893 | TGGGGATGATGGGCGCAG | 62.194 | 66.667 | 10.83 | 0.00 | 0.00 | 5.18 |
996 | 2623 | 2.585247 | GGCACCGCGTCCATCTAC | 60.585 | 66.667 | 4.92 | 0.00 | 0.00 | 2.59 |
1221 | 2848 | 2.498078 | GAGAAGAAGACCCACCGATTCT | 59.502 | 50.000 | 0.00 | 0.00 | 33.51 | 2.40 |
1563 | 3190 | 0.870307 | CGATGACGGTGTCGGATTCC | 60.870 | 60.000 | 5.00 | 0.00 | 41.39 | 3.01 |
1671 | 3298 | 3.323136 | GCGAGCGCGACGATGAAT | 61.323 | 61.111 | 27.55 | 0.00 | 40.82 | 2.57 |
1733 | 3360 | 3.953612 | AGACACCAACTTCAAGCATTTGA | 59.046 | 39.130 | 0.00 | 0.00 | 41.44 | 2.69 |
1744 | 3371 | 2.550208 | GGACCGATGAAGACACCAACTT | 60.550 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
1745 | 3372 | 1.002087 | GGACCGATGAAGACACCAACT | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
1747 | 3374 | 1.001974 | CAGGACCGATGAAGACACCAA | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
1748 | 3375 | 0.608130 | CAGGACCGATGAAGACACCA | 59.392 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1751 | 3378 | 1.751351 | CTAGCAGGACCGATGAAGACA | 59.249 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
1759 | 3389 | 1.754621 | CTGGAGCTAGCAGGACCGA | 60.755 | 63.158 | 18.83 | 5.22 | 0.00 | 4.69 |
1760 | 3390 | 2.790791 | CCTGGAGCTAGCAGGACCG | 61.791 | 68.421 | 18.83 | 10.22 | 38.33 | 4.79 |
1761 | 3391 | 1.381872 | TCCTGGAGCTAGCAGGACC | 60.382 | 63.158 | 18.83 | 14.36 | 39.92 | 4.46 |
1762 | 3392 | 1.398958 | CCTCCTGGAGCTAGCAGGAC | 61.399 | 65.000 | 18.83 | 4.26 | 39.92 | 3.85 |
1764 | 3394 | 2.806009 | GCCTCCTGGAGCTAGCAGG | 61.806 | 68.421 | 18.83 | 15.20 | 37.45 | 4.85 |
1792 | 3423 | 2.034104 | AGCATGGACATACACAGCAG | 57.966 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
1795 | 3426 | 3.503363 | ACACAAAGCATGGACATACACAG | 59.497 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
1801 | 3432 | 2.621407 | CCCCTACACAAAGCATGGACAT | 60.621 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1806 | 3437 | 3.129287 | GTGATTCCCCTACACAAAGCATG | 59.871 | 47.826 | 0.00 | 0.00 | 35.06 | 4.06 |
1865 | 3506 | 3.119291 | CAACGTCATATCAGGCTCTCAC | 58.881 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1867 | 3508 | 3.551863 | CCTCAACGTCATATCAGGCTCTC | 60.552 | 52.174 | 0.00 | 0.00 | 0.00 | 3.20 |
1891 | 3532 | 1.858091 | ACTCTGTTTCACAGCGTCAG | 58.142 | 50.000 | 0.00 | 0.00 | 39.73 | 3.51 |
1934 | 3575 | 1.079750 | GTCAACCGAGTGCCCTCTC | 60.080 | 63.158 | 0.00 | 0.00 | 35.43 | 3.20 |
1954 | 3595 | 1.669795 | CGAATTGGACCAAGCAAAGGC | 60.670 | 52.381 | 13.43 | 0.00 | 41.61 | 4.35 |
1960 | 3601 | 0.966179 | AAACCCGAATTGGACCAAGC | 59.034 | 50.000 | 13.43 | 6.44 | 42.00 | 4.01 |
1982 | 3623 | 1.514003 | TGCGTTGAAGATGCCGTAAA | 58.486 | 45.000 | 0.00 | 0.00 | 39.64 | 2.01 |
1983 | 3624 | 1.514003 | TTGCGTTGAAGATGCCGTAA | 58.486 | 45.000 | 0.00 | 0.00 | 39.64 | 3.18 |
1985 | 3626 | 0.040425 | GTTTGCGTTGAAGATGCCGT | 60.040 | 50.000 | 0.00 | 0.00 | 39.64 | 5.68 |
1986 | 3627 | 0.729140 | GGTTTGCGTTGAAGATGCCG | 60.729 | 55.000 | 0.00 | 0.00 | 39.64 | 5.69 |
1992 | 3633 | 3.377439 | GGTTTAAGGGTTTGCGTTGAAG | 58.623 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
1994 | 3635 | 1.334243 | CGGTTTAAGGGTTTGCGTTGA | 59.666 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
1998 | 3639 | 0.662077 | GCACGGTTTAAGGGTTTGCG | 60.662 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2001 | 3642 | 1.102222 | TGCGCACGGTTTAAGGGTTT | 61.102 | 50.000 | 5.66 | 0.00 | 0.00 | 3.27 |
2002 | 3643 | 0.891904 | ATGCGCACGGTTTAAGGGTT | 60.892 | 50.000 | 14.90 | 0.00 | 0.00 | 4.11 |
2009 | 3650 | 2.355718 | GGCAAATGCGCACGGTTT | 60.356 | 55.556 | 14.90 | 7.00 | 43.26 | 3.27 |
2035 | 3676 | 3.311106 | TGATAGAACACGTTCGAACCAC | 58.689 | 45.455 | 22.07 | 9.21 | 43.97 | 4.16 |
2040 | 3681 | 4.421058 | CTTGGATGATAGAACACGTTCGA | 58.579 | 43.478 | 4.35 | 0.00 | 43.97 | 3.71 |
2042 | 3683 | 3.932710 | TGCTTGGATGATAGAACACGTTC | 59.067 | 43.478 | 1.54 | 1.54 | 39.78 | 3.95 |
2043 | 3684 | 3.935203 | CTGCTTGGATGATAGAACACGTT | 59.065 | 43.478 | 0.00 | 0.00 | 0.00 | 3.99 |
2053 | 3694 | 2.086869 | CGTGAAACCTGCTTGGATGAT | 58.913 | 47.619 | 3.40 | 0.00 | 39.71 | 2.45 |
2054 | 3695 | 1.071542 | TCGTGAAACCTGCTTGGATGA | 59.928 | 47.619 | 3.40 | 0.00 | 39.71 | 2.92 |
2067 | 3708 | 2.257371 | CCCGTCGAGCTCGTGAAA | 59.743 | 61.111 | 33.33 | 13.67 | 40.80 | 2.69 |
2089 | 3730 | 0.832135 | TCACCTCCGTCCTTGCTCTT | 60.832 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2093 | 3734 | 2.047179 | GGTCACCTCCGTCCTTGC | 60.047 | 66.667 | 0.00 | 0.00 | 0.00 | 4.01 |
2103 | 3744 | 3.374402 | CACTCGCTCCGGTCACCT | 61.374 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2105 | 3746 | 2.711922 | ATCCACTCGCTCCGGTCAC | 61.712 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
2111 | 3752 | 4.899239 | CGGCCATCCACTCGCTCC | 62.899 | 72.222 | 2.24 | 0.00 | 0.00 | 4.70 |
2116 | 3757 | 4.489771 | CCCCACGGCCATCCACTC | 62.490 | 72.222 | 2.24 | 0.00 | 0.00 | 3.51 |
2142 | 3783 | 1.529309 | GATCCTCCCCAGAGTTGGC | 59.471 | 63.158 | 0.00 | 0.00 | 43.58 | 4.52 |
2146 | 3787 | 2.444895 | GCCGATCCTCCCCAGAGT | 60.445 | 66.667 | 0.00 | 0.00 | 38.58 | 3.24 |
2150 | 3791 | 4.146156 | TACCGCCGATCCTCCCCA | 62.146 | 66.667 | 0.00 | 0.00 | 0.00 | 4.96 |
2153 | 3794 | 2.203451 | TCCTACCGCCGATCCTCC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2198 | 3839 | 1.124477 | TGGCCACAAATTGAACCCCC | 61.124 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
2202 | 3843 | 1.686052 | TCCACTGGCCACAAATTGAAC | 59.314 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
2204 | 3845 | 2.079170 | TTCCACTGGCCACAAATTGA | 57.921 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2206 | 3847 | 1.545582 | CGATTCCACTGGCCACAAATT | 59.454 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
2214 | 3855 | 1.639298 | GCACACTCGATTCCACTGGC | 61.639 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2216 | 3857 | 1.354040 | GAGCACACTCGATTCCACTG | 58.646 | 55.000 | 0.00 | 0.00 | 32.04 | 3.66 |
2248 | 3889 | 8.568676 | TCTCTCTATAAATAGACTCATTCCCG | 57.431 | 38.462 | 0.00 | 0.00 | 35.64 | 5.14 |
2252 | 3893 | 8.461033 | ACCCCTCTCTCTATAAATAGACTCATT | 58.539 | 37.037 | 0.00 | 0.00 | 35.64 | 2.57 |
2256 | 3897 | 6.557568 | CCACCCCTCTCTCTATAAATAGACT | 58.442 | 44.000 | 0.00 | 0.00 | 35.64 | 3.24 |
2257 | 3898 | 5.186215 | GCCACCCCTCTCTCTATAAATAGAC | 59.814 | 48.000 | 0.00 | 0.00 | 35.64 | 2.59 |
2265 | 3906 | 1.152440 | CGGCCACCCCTCTCTCTAT | 60.152 | 63.158 | 2.24 | 0.00 | 0.00 | 1.98 |
2270 | 3911 | 4.452733 | CGTTCGGCCACCCCTCTC | 62.453 | 72.222 | 2.24 | 0.00 | 0.00 | 3.20 |
2282 | 3923 | 2.876645 | GACGGAGCTCAGCGTTCG | 60.877 | 66.667 | 17.19 | 11.08 | 0.00 | 3.95 |
2283 | 3924 | 2.876645 | CGACGGAGCTCAGCGTTC | 60.877 | 66.667 | 17.19 | 4.49 | 0.00 | 3.95 |
2284 | 3925 | 4.421479 | CCGACGGAGCTCAGCGTT | 62.421 | 66.667 | 17.19 | 0.00 | 0.00 | 4.84 |
2298 | 3939 | 3.068691 | CCGACAGCCCTTCTCCGA | 61.069 | 66.667 | 0.00 | 0.00 | 0.00 | 4.55 |
2307 | 3948 | 1.424493 | CTCTGATTTCGCCGACAGCC | 61.424 | 60.000 | 0.00 | 0.00 | 38.78 | 4.85 |
2313 | 3954 | 0.249238 | CTCTCCCTCTGATTTCGCCG | 60.249 | 60.000 | 0.00 | 0.00 | 0.00 | 6.46 |
2320 | 3961 | 0.178992 | CGAGCTCCTCTCCCTCTGAT | 60.179 | 60.000 | 8.47 | 0.00 | 38.62 | 2.90 |
2321 | 3962 | 1.225983 | CGAGCTCCTCTCCCTCTGA | 59.774 | 63.158 | 8.47 | 0.00 | 38.62 | 3.27 |
2322 | 3963 | 1.827789 | CCGAGCTCCTCTCCCTCTG | 60.828 | 68.421 | 8.47 | 0.00 | 38.62 | 3.35 |
2332 | 3973 | 1.743252 | CAAGACTTGCCCGAGCTCC | 60.743 | 63.158 | 8.47 | 0.00 | 40.80 | 4.70 |
2342 | 3983 | 3.368948 | GCCTACTTCCTCTCCAAGACTTG | 60.369 | 52.174 | 8.31 | 8.31 | 0.00 | 3.16 |
2343 | 3984 | 2.835156 | GCCTACTTCCTCTCCAAGACTT | 59.165 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2354 | 3995 | 2.122167 | CGGAGCTCGCCTACTTCCT | 61.122 | 63.158 | 7.83 | 0.00 | 0.00 | 3.36 |
2355 | 3996 | 2.065906 | CTCGGAGCTCGCCTACTTCC | 62.066 | 65.000 | 7.83 | 0.00 | 39.05 | 3.46 |
2402 | 4043 | 0.441533 | CTGCTTCACTTAGTGCGCTG | 59.558 | 55.000 | 20.59 | 17.53 | 33.36 | 5.18 |
2413 | 4054 | 3.426568 | GTGCGGCTCCTGCTTCAC | 61.427 | 66.667 | 0.00 | 0.00 | 39.59 | 3.18 |
2416 | 4057 | 4.711949 | CTGGTGCGGCTCCTGCTT | 62.712 | 66.667 | 20.53 | 0.00 | 39.59 | 3.91 |
2431 | 4072 | 3.782244 | GCGGAACAGTGAGCGCTG | 61.782 | 66.667 | 18.48 | 2.93 | 41.92 | 5.18 |
2436 | 4077 | 2.743718 | ACTGGGCGGAACAGTGAG | 59.256 | 61.111 | 0.00 | 0.00 | 46.67 | 3.51 |
2442 | 4083 | 2.436115 | GGCACTACTGGGCGGAAC | 60.436 | 66.667 | 0.00 | 0.00 | 0.00 | 3.62 |
2468 | 4115 | 4.969196 | ACACCGACAGGCAGCACG | 62.969 | 66.667 | 0.00 | 0.00 | 42.76 | 5.34 |
2483 | 4130 | 4.414956 | ATCTGCCCCTCCCCGACA | 62.415 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
2486 | 4133 | 3.089874 | TTGATCTGCCCCTCCCCG | 61.090 | 66.667 | 0.00 | 0.00 | 0.00 | 5.73 |
2497 | 4144 | 1.903877 | CGTCCACCTGGCCTTGATCT | 61.904 | 60.000 | 3.32 | 0.00 | 34.44 | 2.75 |
2499 | 4146 | 2.671070 | CGTCCACCTGGCCTTGAT | 59.329 | 61.111 | 3.32 | 0.00 | 34.44 | 2.57 |
2500 | 4147 | 4.329545 | GCGTCCACCTGGCCTTGA | 62.330 | 66.667 | 3.32 | 0.00 | 34.44 | 3.02 |
2517 | 4164 | 3.699894 | ACTCAGCACCCTCCTGCG | 61.700 | 66.667 | 0.00 | 0.00 | 42.42 | 5.18 |
2520 | 4167 | 3.325753 | GCCACTCAGCACCCTCCT | 61.326 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
2525 | 4172 | 4.767255 | CCTCCGCCACTCAGCACC | 62.767 | 72.222 | 0.00 | 0.00 | 0.00 | 5.01 |
2529 | 4176 | 2.581354 | CTTCCCTCCGCCACTCAG | 59.419 | 66.667 | 0.00 | 0.00 | 0.00 | 3.35 |
2555 | 4202 | 2.956964 | CGTTCATCCTCCTCGCGC | 60.957 | 66.667 | 0.00 | 0.00 | 0.00 | 6.86 |
2559 | 4206 | 2.107141 | CGCCCGTTCATCCTCCTC | 59.893 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
2577 | 4224 | 3.532155 | ATCGGGGCTCTCTGTCGC | 61.532 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
2598 | 4245 | 2.520039 | ATGCATTCGACGCGCTCTG | 61.520 | 57.895 | 5.73 | 0.00 | 0.00 | 3.35 |
2605 | 4252 | 0.713329 | TGTTCGACATGCATTCGACG | 59.287 | 50.000 | 24.02 | 14.97 | 44.89 | 5.12 |
2607 | 4254 | 1.075542 | GGTGTTCGACATGCATTCGA | 58.924 | 50.000 | 21.84 | 21.84 | 43.59 | 3.71 |
2610 | 4257 | 2.009774 | GCTAGGTGTTCGACATGCATT | 58.990 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
2611 | 4258 | 1.066215 | TGCTAGGTGTTCGACATGCAT | 60.066 | 47.619 | 0.00 | 0.00 | 0.00 | 3.96 |
2620 | 4267 | 1.741770 | CGCTGGGTGCTAGGTGTTC | 60.742 | 63.158 | 0.00 | 0.00 | 40.11 | 3.18 |
2628 | 4275 | 4.626081 | GTGACCACGCTGGGTGCT | 62.626 | 66.667 | 18.35 | 5.85 | 45.62 | 4.40 |
2637 | 4284 | 3.698463 | GTGAACGCGGTGACCACG | 61.698 | 66.667 | 10.89 | 10.89 | 0.00 | 4.94 |
2638 | 4285 | 2.279918 | AGTGAACGCGGTGACCAC | 60.280 | 61.111 | 10.98 | 8.39 | 0.00 | 4.16 |
2697 | 4344 | 2.612221 | CCCCACGTTGAAGGAACTACTC | 60.612 | 54.545 | 0.00 | 0.00 | 38.49 | 2.59 |
2698 | 4345 | 1.346722 | CCCCACGTTGAAGGAACTACT | 59.653 | 52.381 | 0.00 | 0.00 | 38.49 | 2.57 |
2699 | 4346 | 1.804601 | CCCCACGTTGAAGGAACTAC | 58.195 | 55.000 | 0.00 | 0.00 | 38.49 | 2.73 |
2700 | 4347 | 0.035739 | GCCCCACGTTGAAGGAACTA | 59.964 | 55.000 | 0.00 | 0.00 | 38.49 | 2.24 |
2702 | 4349 | 3.351450 | GCCCCACGTTGAAGGAAC | 58.649 | 61.111 | 0.00 | 0.00 | 0.00 | 3.62 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.