Multiple sequence alignment - TraesCS5B01G482200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G482200 | chr5B | 100.000 | 2859 | 0 | 0 | 1 | 2859 | 654905641 | 654902783 | 0.000000e+00 | 5280.0 |
1 | TraesCS5B01G482200 | chr5B | 86.935 | 199 | 20 | 1 | 1146 | 1344 | 654892797 | 654892605 | 4.800000e-53 | 219.0 |
2 | TraesCS5B01G482200 | chr5B | 89.916 | 119 | 10 | 2 | 3 | 120 | 167332395 | 167332278 | 4.930000e-33 | 152.0 |
3 | TraesCS5B01G482200 | chr5B | 86.777 | 121 | 14 | 2 | 1 | 120 | 390164454 | 390164573 | 1.790000e-27 | 134.0 |
4 | TraesCS5B01G482200 | chr5B | 85.217 | 115 | 9 | 4 | 3 | 111 | 79142622 | 79142734 | 8.370000e-21 | 111.0 |
5 | TraesCS5B01G482200 | chr5D | 88.733 | 1642 | 102 | 41 | 227 | 1821 | 519822665 | 519821060 | 0.000000e+00 | 1930.0 |
6 | TraesCS5B01G482200 | chr5D | 87.444 | 446 | 40 | 6 | 2421 | 2858 | 519818152 | 519817715 | 1.530000e-137 | 499.0 |
7 | TraesCS5B01G482200 | chr5D | 86.087 | 115 | 8 | 4 | 3 | 111 | 309577672 | 309577560 | 1.800000e-22 | 117.0 |
8 | TraesCS5B01G482200 | chr5D | 77.273 | 176 | 38 | 2 | 2589 | 2763 | 531467959 | 531467785 | 5.040000e-18 | 102.0 |
9 | TraesCS5B01G482200 | chr5A | 89.788 | 1371 | 67 | 23 | 388 | 1711 | 646597947 | 646596603 | 0.000000e+00 | 1688.0 |
10 | TraesCS5B01G482200 | chr5A | 83.148 | 540 | 52 | 17 | 2347 | 2859 | 646568752 | 646568225 | 9.340000e-125 | 457.0 |
11 | TraesCS5B01G482200 | chr5A | 80.346 | 636 | 51 | 31 | 659 | 1249 | 646833635 | 646833029 | 5.700000e-112 | 414.0 |
12 | TraesCS5B01G482200 | chr5A | 85.714 | 217 | 22 | 2 | 1146 | 1359 | 646564834 | 646564624 | 1.330000e-53 | 220.0 |
13 | TraesCS5B01G482200 | chr5A | 82.231 | 242 | 26 | 8 | 228 | 466 | 646848146 | 646847919 | 2.910000e-45 | 193.0 |
14 | TraesCS5B01G482200 | chr5A | 95.588 | 68 | 3 | 0 | 324 | 391 | 646599423 | 646599356 | 3.010000e-20 | 110.0 |
15 | TraesCS5B01G482200 | chr5A | 87.500 | 96 | 5 | 5 | 1777 | 1867 | 646596581 | 646596488 | 1.400000e-18 | 104.0 |
16 | TraesCS5B01G482200 | chr1B | 91.736 | 121 | 8 | 2 | 1 | 120 | 185982467 | 185982586 | 1.760000e-37 | 167.0 |
17 | TraesCS5B01G482200 | chr1B | 85.057 | 87 | 8 | 3 | 1923 | 2005 | 471180705 | 471180790 | 1.830000e-12 | 84.2 |
18 | TraesCS5B01G482200 | chr4A | 91.304 | 115 | 8 | 2 | 6 | 119 | 687150994 | 687151107 | 3.810000e-34 | 156.0 |
19 | TraesCS5B01G482200 | chr1D | 88.235 | 119 | 14 | 0 | 1 | 119 | 417988045 | 417988163 | 2.970000e-30 | 143.0 |
20 | TraesCS5B01G482200 | chr1D | 84.127 | 63 | 10 | 0 | 2740 | 2802 | 115015390 | 115015328 | 8.550000e-06 | 62.1 |
21 | TraesCS5B01G482200 | chr1D | 100.000 | 28 | 0 | 0 | 1977 | 2004 | 185128675 | 185128648 | 5.000000e-03 | 52.8 |
22 | TraesCS5B01G482200 | chr7B | 87.179 | 117 | 13 | 2 | 4 | 119 | 226588840 | 226588725 | 6.430000e-27 | 132.0 |
23 | TraesCS5B01G482200 | chr7B | 86.066 | 122 | 14 | 3 | 1 | 120 | 319659486 | 319659606 | 8.310000e-26 | 128.0 |
24 | TraesCS5B01G482200 | chr7B | 91.525 | 59 | 5 | 0 | 2721 | 2779 | 647427539 | 647427597 | 6.570000e-12 | 82.4 |
25 | TraesCS5B01G482200 | chr7A | 84.314 | 102 | 13 | 3 | 1925 | 2025 | 721874187 | 721874088 | 2.340000e-16 | 97.1 |
26 | TraesCS5B01G482200 | chr1A | 92.105 | 38 | 2 | 1 | 1977 | 2013 | 400421254 | 400421291 | 5.000000e-03 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G482200 | chr5B | 654902783 | 654905641 | 2858 | True | 5280.0 | 5280 | 100.000000 | 1 | 2859 | 1 | chr5B.!!$R3 | 2858 |
1 | TraesCS5B01G482200 | chr5D | 519817715 | 519822665 | 4950 | True | 1214.5 | 1930 | 88.088500 | 227 | 2858 | 2 | chr5D.!!$R3 | 2631 |
2 | TraesCS5B01G482200 | chr5A | 646596488 | 646599423 | 2935 | True | 634.0 | 1688 | 90.958667 | 324 | 1867 | 3 | chr5A.!!$R4 | 1543 |
3 | TraesCS5B01G482200 | chr5A | 646833029 | 646833635 | 606 | True | 414.0 | 414 | 80.346000 | 659 | 1249 | 1 | chr5A.!!$R1 | 590 |
4 | TraesCS5B01G482200 | chr5A | 646564624 | 646568752 | 4128 | True | 338.5 | 457 | 84.431000 | 1146 | 2859 | 2 | chr5A.!!$R3 | 1713 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
967 | 2463 | 0.106819 | GGTGCCTTGAGATCCAGCAT | 60.107 | 55.0 | 0.0 | 0.0 | 35.62 | 3.79 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1982 | 7094 | 0.037734 | TGTGGCTAGGTCTCACTCGA | 59.962 | 55.0 | 0.0 | 0.0 | 33.04 | 4.04 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 3.038417 | GCGTCAGTGCTCTGCGTT | 61.038 | 61.111 | 23.36 | 0.00 | 40.46 | 4.84 |
19 | 20 | 1.945776 | GCGTCAGTGCTCTGCGTTAC | 61.946 | 60.000 | 23.36 | 12.37 | 40.46 | 2.50 |
20 | 21 | 1.665544 | CGTCAGTGCTCTGCGTTACG | 61.666 | 60.000 | 18.16 | 15.12 | 41.10 | 3.18 |
22 | 23 | 0.876399 | TCAGTGCTCTGCGTTACGTA | 59.124 | 50.000 | 10.95 | 0.00 | 41.10 | 3.57 |
24 | 25 | 2.094906 | TCAGTGCTCTGCGTTACGTATT | 60.095 | 45.455 | 10.95 | 0.00 | 41.10 | 1.89 |
25 | 26 | 3.127376 | TCAGTGCTCTGCGTTACGTATTA | 59.873 | 43.478 | 10.95 | 0.00 | 41.10 | 0.98 |
26 | 27 | 3.482472 | CAGTGCTCTGCGTTACGTATTAG | 59.518 | 47.826 | 6.63 | 3.95 | 34.79 | 1.73 |
27 | 28 | 2.787680 | GTGCTCTGCGTTACGTATTAGG | 59.212 | 50.000 | 6.63 | 0.00 | 0.00 | 2.69 |
28 | 29 | 1.785430 | GCTCTGCGTTACGTATTAGGC | 59.215 | 52.381 | 6.63 | 0.11 | 0.00 | 3.93 |
29 | 30 | 2.041966 | CTCTGCGTTACGTATTAGGCG | 58.958 | 52.381 | 6.63 | 0.00 | 0.00 | 5.52 |
30 | 31 | 0.501435 | CTGCGTTACGTATTAGGCGC | 59.499 | 55.000 | 6.63 | 16.30 | 44.29 | 6.53 |
31 | 32 | 2.580661 | GCGTTACGTATTAGGCGCA | 58.419 | 52.632 | 10.83 | 0.00 | 43.62 | 6.09 |
33 | 34 | 1.071698 | GCGTTACGTATTAGGCGCAAG | 60.072 | 52.381 | 10.83 | 0.00 | 43.62 | 4.01 |
35 | 36 | 2.599973 | CGTTACGTATTAGGCGCAAGTT | 59.400 | 45.455 | 10.83 | 0.00 | 41.68 | 2.66 |
36 | 37 | 3.301388 | CGTTACGTATTAGGCGCAAGTTC | 60.301 | 47.826 | 10.83 | 0.00 | 41.68 | 3.01 |
37 | 38 | 1.274596 | ACGTATTAGGCGCAAGTTCG | 58.725 | 50.000 | 10.83 | 9.10 | 41.68 | 3.95 |
38 | 39 | 0.575390 | CGTATTAGGCGCAAGTTCGG | 59.425 | 55.000 | 10.83 | 0.00 | 41.68 | 4.30 |
41 | 42 | 1.024579 | ATTAGGCGCAAGTTCGGTGG | 61.025 | 55.000 | 10.83 | 0.00 | 41.68 | 4.61 |
42 | 43 | 2.386064 | TTAGGCGCAAGTTCGGTGGT | 62.386 | 55.000 | 10.83 | 0.00 | 41.68 | 4.16 |
44 | 45 | 2.719354 | GCGCAAGTTCGGTGGTTT | 59.281 | 55.556 | 0.30 | 0.00 | 41.68 | 3.27 |
45 | 46 | 1.065109 | GCGCAAGTTCGGTGGTTTT | 59.935 | 52.632 | 0.30 | 0.00 | 41.68 | 2.43 |
46 | 47 | 0.526739 | GCGCAAGTTCGGTGGTTTTT | 60.527 | 50.000 | 0.30 | 0.00 | 41.68 | 1.94 |
66 | 67 | 4.383850 | TTTGTGTCCTGGTTCAAATGTG | 57.616 | 40.909 | 0.00 | 0.00 | 0.00 | 3.21 |
67 | 68 | 2.305928 | TGTGTCCTGGTTCAAATGTGG | 58.694 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
68 | 69 | 2.306847 | GTGTCCTGGTTCAAATGTGGT | 58.693 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
69 | 70 | 3.117851 | TGTGTCCTGGTTCAAATGTGGTA | 60.118 | 43.478 | 0.00 | 0.00 | 0.00 | 3.25 |
70 | 71 | 3.252458 | GTGTCCTGGTTCAAATGTGGTAC | 59.748 | 47.826 | 0.00 | 0.00 | 0.00 | 3.34 |
72 | 73 | 3.886505 | GTCCTGGTTCAAATGTGGTACAA | 59.113 | 43.478 | 0.00 | 0.00 | 44.16 | 2.41 |
73 | 74 | 4.339814 | GTCCTGGTTCAAATGTGGTACAAA | 59.660 | 41.667 | 0.00 | 0.00 | 44.16 | 2.83 |
83 | 84 | 5.777850 | AATGTGGTACAAAGTTGTTACCC | 57.222 | 39.130 | 1.35 | 1.82 | 44.16 | 3.69 |
84 | 85 | 4.506937 | TGTGGTACAAAGTTGTTACCCT | 57.493 | 40.909 | 1.35 | 0.00 | 44.16 | 4.34 |
85 | 86 | 5.627182 | TGTGGTACAAAGTTGTTACCCTA | 57.373 | 39.130 | 1.35 | 0.00 | 44.16 | 3.53 |
87 | 88 | 4.453478 | GTGGTACAAAGTTGTTACCCTAGC | 59.547 | 45.833 | 1.35 | 0.00 | 44.16 | 3.42 |
88 | 89 | 4.005650 | GGTACAAAGTTGTTACCCTAGCC | 58.994 | 47.826 | 1.35 | 0.00 | 42.35 | 3.93 |
89 | 90 | 3.150458 | ACAAAGTTGTTACCCTAGCCC | 57.850 | 47.619 | 0.00 | 0.00 | 38.47 | 5.19 |
90 | 91 | 2.224942 | ACAAAGTTGTTACCCTAGCCCC | 60.225 | 50.000 | 0.00 | 0.00 | 38.47 | 5.80 |
91 | 92 | 1.750022 | AAGTTGTTACCCTAGCCCCA | 58.250 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
92 | 93 | 1.750022 | AGTTGTTACCCTAGCCCCAA | 58.250 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
95 | 96 | 1.282382 | TGTTACCCTAGCCCCAAGTC | 58.718 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
97 | 98 | 1.209747 | GTTACCCTAGCCCCAAGTCTG | 59.790 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
98 | 99 | 0.326238 | TACCCTAGCCCCAAGTCTGG | 60.326 | 60.000 | 0.00 | 0.00 | 43.10 | 3.86 |
99 | 100 | 1.616628 | CCCTAGCCCCAAGTCTGGT | 60.617 | 63.158 | 0.00 | 0.00 | 41.72 | 4.00 |
100 | 101 | 1.604378 | CCTAGCCCCAAGTCTGGTG | 59.396 | 63.158 | 0.00 | 0.00 | 41.72 | 4.17 |
101 | 102 | 1.604378 | CTAGCCCCAAGTCTGGTGG | 59.396 | 63.158 | 0.00 | 0.00 | 41.72 | 4.61 |
102 | 103 | 1.151899 | TAGCCCCAAGTCTGGTGGT | 60.152 | 57.895 | 0.00 | 0.00 | 41.72 | 4.16 |
104 | 105 | 1.152546 | GCCCCAAGTCTGGTGGTTT | 60.153 | 57.895 | 0.00 | 0.00 | 41.72 | 3.27 |
105 | 106 | 0.759060 | GCCCCAAGTCTGGTGGTTTT | 60.759 | 55.000 | 0.00 | 0.00 | 41.72 | 2.43 |
107 | 108 | 1.039856 | CCCAAGTCTGGTGGTTTTGG | 58.960 | 55.000 | 0.00 | 0.00 | 41.72 | 3.28 |
108 | 109 | 1.039856 | CCAAGTCTGGTGGTTTTGGG | 58.960 | 55.000 | 0.00 | 0.00 | 38.00 | 4.12 |
109 | 110 | 1.687996 | CCAAGTCTGGTGGTTTTGGGT | 60.688 | 52.381 | 0.00 | 0.00 | 38.00 | 4.51 |
110 | 111 | 2.423660 | CCAAGTCTGGTGGTTTTGGGTA | 60.424 | 50.000 | 0.00 | 0.00 | 38.00 | 3.69 |
112 | 113 | 3.673543 | AGTCTGGTGGTTTTGGGTAAA | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 2.01 |
114 | 115 | 5.327737 | AGTCTGGTGGTTTTGGGTAAATA | 57.672 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
115 | 116 | 5.707495 | AGTCTGGTGGTTTTGGGTAAATAA | 58.293 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
116 | 117 | 5.537295 | AGTCTGGTGGTTTTGGGTAAATAAC | 59.463 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
117 | 118 | 5.537295 | GTCTGGTGGTTTTGGGTAAATAACT | 59.463 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
118 | 119 | 5.771165 | TCTGGTGGTTTTGGGTAAATAACTC | 59.229 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
119 | 120 | 5.455872 | TGGTGGTTTTGGGTAAATAACTCA | 58.544 | 37.500 | 0.00 | 0.00 | 36.54 | 3.41 |
130 | 131 | 8.600449 | TGGGTAAATAACTCAAAAATTGCTTG | 57.400 | 30.769 | 0.00 | 0.00 | 34.89 | 4.01 |
131 | 132 | 7.172361 | TGGGTAAATAACTCAAAAATTGCTTGC | 59.828 | 33.333 | 0.00 | 0.00 | 34.89 | 4.01 |
133 | 134 | 9.418045 | GGTAAATAACTCAAAAATTGCTTGCTA | 57.582 | 29.630 | 0.00 | 0.00 | 0.00 | 3.49 |
137 | 138 | 9.492973 | AATAACTCAAAAATTGCTTGCTATGTT | 57.507 | 25.926 | 0.00 | 0.00 | 0.00 | 2.71 |
138 | 139 | 7.790823 | AACTCAAAAATTGCTTGCTATGTTT | 57.209 | 28.000 | 0.62 | 0.62 | 0.00 | 2.83 |
141 | 142 | 7.495279 | ACTCAAAAATTGCTTGCTATGTTTCAA | 59.505 | 29.630 | 3.01 | 0.00 | 0.00 | 2.69 |
142 | 143 | 7.853524 | TCAAAAATTGCTTGCTATGTTTCAAG | 58.146 | 30.769 | 3.01 | 0.00 | 41.79 | 3.02 |
144 | 145 | 8.500773 | CAAAAATTGCTTGCTATGTTTCAAGAT | 58.499 | 29.630 | 6.20 | 0.00 | 41.50 | 2.40 |
146 | 147 | 9.709495 | AAAATTGCTTGCTATGTTTCAAGATAA | 57.291 | 25.926 | 6.20 | 1.67 | 41.50 | 1.75 |
147 | 148 | 9.880157 | AAATTGCTTGCTATGTTTCAAGATAAT | 57.120 | 25.926 | 6.20 | 3.59 | 41.50 | 1.28 |
148 | 149 | 8.867112 | ATTGCTTGCTATGTTTCAAGATAATG | 57.133 | 30.769 | 6.20 | 0.00 | 41.50 | 1.90 |
149 | 150 | 7.628769 | TGCTTGCTATGTTTCAAGATAATGA | 57.371 | 32.000 | 6.20 | 0.00 | 41.50 | 2.57 |
150 | 151 | 8.054152 | TGCTTGCTATGTTTCAAGATAATGAA | 57.946 | 30.769 | 6.20 | 0.00 | 41.50 | 2.57 |
151 | 152 | 8.522003 | TGCTTGCTATGTTTCAAGATAATGAAA | 58.478 | 29.630 | 6.20 | 0.00 | 44.68 | 2.69 |
177 | 178 | 9.768662 | AAATAATATGAGCATGTTTTTCCATCC | 57.231 | 29.630 | 0.00 | 0.00 | 0.00 | 3.51 |
178 | 179 | 3.788333 | ATGAGCATGTTTTTCCATCCG | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
181 | 182 | 3.571828 | TGAGCATGTTTTTCCATCCGAAA | 59.428 | 39.130 | 0.00 | 0.00 | 38.74 | 3.46 |
182 | 183 | 4.038522 | TGAGCATGTTTTTCCATCCGAAAA | 59.961 | 37.500 | 0.00 | 0.00 | 46.41 | 2.29 |
190 | 191 | 5.890424 | TTTTCCATCCGAAAACTATCCAC | 57.110 | 39.130 | 0.00 | 0.00 | 43.89 | 4.02 |
191 | 192 | 4.561500 | TTCCATCCGAAAACTATCCACA | 57.438 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
192 | 193 | 4.771114 | TCCATCCGAAAACTATCCACAT | 57.229 | 40.909 | 0.00 | 0.00 | 0.00 | 3.21 |
193 | 194 | 5.110814 | TCCATCCGAAAACTATCCACATT | 57.889 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
194 | 195 | 5.505780 | TCCATCCGAAAACTATCCACATTT | 58.494 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
195 | 196 | 5.949354 | TCCATCCGAAAACTATCCACATTTT | 59.051 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
196 | 197 | 6.094881 | TCCATCCGAAAACTATCCACATTTTC | 59.905 | 38.462 | 0.00 | 0.00 | 38.43 | 2.29 |
197 | 198 | 5.890424 | TCCGAAAACTATCCACATTTTCC | 57.110 | 39.130 | 0.00 | 0.00 | 38.53 | 3.13 |
198 | 199 | 5.566469 | TCCGAAAACTATCCACATTTTCCT | 58.434 | 37.500 | 0.00 | 0.00 | 38.53 | 3.36 |
200 | 201 | 6.150474 | TCCGAAAACTATCCACATTTTCCTTC | 59.850 | 38.462 | 0.00 | 0.00 | 38.53 | 3.46 |
201 | 202 | 6.151144 | CCGAAAACTATCCACATTTTCCTTCT | 59.849 | 38.462 | 0.00 | 0.00 | 38.53 | 2.85 |
203 | 204 | 8.726988 | CGAAAACTATCCACATTTTCCTTCTTA | 58.273 | 33.333 | 0.00 | 0.00 | 38.53 | 2.10 |
207 | 208 | 8.349568 | ACTATCCACATTTTCCTTCTTAAACC | 57.650 | 34.615 | 0.00 | 0.00 | 0.00 | 3.27 |
208 | 209 | 5.699097 | TCCACATTTTCCTTCTTAAACCG | 57.301 | 39.130 | 0.00 | 0.00 | 0.00 | 4.44 |
209 | 210 | 5.134661 | TCCACATTTTCCTTCTTAAACCGT | 58.865 | 37.500 | 0.00 | 0.00 | 0.00 | 4.83 |
210 | 211 | 5.009210 | TCCACATTTTCCTTCTTAAACCGTG | 59.991 | 40.000 | 0.00 | 0.00 | 0.00 | 4.94 |
211 | 212 | 5.219633 | CACATTTTCCTTCTTAAACCGTGG | 58.780 | 41.667 | 0.00 | 0.00 | 0.00 | 4.94 |
212 | 213 | 3.994204 | TTTTCCTTCTTAAACCGTGGC | 57.006 | 42.857 | 0.00 | 0.00 | 0.00 | 5.01 |
213 | 214 | 2.642154 | TTCCTTCTTAAACCGTGGCA | 57.358 | 45.000 | 0.00 | 0.00 | 0.00 | 4.92 |
214 | 215 | 2.642154 | TCCTTCTTAAACCGTGGCAA | 57.358 | 45.000 | 0.00 | 0.00 | 0.00 | 4.52 |
215 | 216 | 2.933573 | TCCTTCTTAAACCGTGGCAAA | 58.066 | 42.857 | 0.00 | 0.00 | 0.00 | 3.68 |
217 | 218 | 2.621526 | CCTTCTTAAACCGTGGCAAAGT | 59.378 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
220 | 221 | 3.280295 | TCTTAAACCGTGGCAAAGTCAA | 58.720 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
221 | 222 | 3.886505 | TCTTAAACCGTGGCAAAGTCAAT | 59.113 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
222 | 223 | 2.507339 | AAACCGTGGCAAAGTCAATG | 57.493 | 45.000 | 0.00 | 0.00 | 0.00 | 2.82 |
223 | 224 | 1.686355 | AACCGTGGCAAAGTCAATGA | 58.314 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
224 | 225 | 1.686355 | ACCGTGGCAAAGTCAATGAA | 58.314 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
225 | 226 | 2.028130 | ACCGTGGCAAAGTCAATGAAA | 58.972 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
231 | 232 | 4.268405 | GTGGCAAAGTCAATGAAAACACTG | 59.732 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
232 | 233 | 4.159321 | TGGCAAAGTCAATGAAAACACTGA | 59.841 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
293 | 294 | 4.273148 | ACATGACACCTGAAAGTCTACC | 57.727 | 45.455 | 0.00 | 0.00 | 35.81 | 3.18 |
296 | 297 | 2.632996 | TGACACCTGAAAGTCTACCCTG | 59.367 | 50.000 | 0.00 | 0.00 | 35.81 | 4.45 |
305 | 306 | 5.399991 | TGAAAGTCTACCCTGGAACTTCTA | 58.600 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
306 | 307 | 6.023603 | TGAAAGTCTACCCTGGAACTTCTAT | 58.976 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
308 | 309 | 3.707102 | AGTCTACCCTGGAACTTCTATGC | 59.293 | 47.826 | 0.00 | 0.00 | 0.00 | 3.14 |
312 | 313 | 1.839994 | CCCTGGAACTTCTATGCTCCA | 59.160 | 52.381 | 0.00 | 0.00 | 36.53 | 3.86 |
341 | 342 | 1.257750 | GGCTTGGGGGTTCCATGTTC | 61.258 | 60.000 | 0.00 | 0.00 | 46.52 | 3.18 |
349 | 350 | 3.317993 | GGGGGTTCCATGTTCGATTAATG | 59.682 | 47.826 | 0.00 | 0.00 | 35.00 | 1.90 |
412 | 1825 | 1.902556 | GCCTAACCTCCGGCAGTTA | 59.097 | 57.895 | 13.46 | 13.46 | 45.59 | 2.24 |
420 | 1833 | 2.039879 | ACCTCCGGCAGTTAAGTTCATT | 59.960 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
425 | 1838 | 3.181510 | CCGGCAGTTAAGTTCATTAGTGC | 60.182 | 47.826 | 0.00 | 0.00 | 35.72 | 4.40 |
446 | 1860 | 1.342496 | TCTCATCGCCTGGATCATCAC | 59.658 | 52.381 | 0.00 | 0.00 | 31.28 | 3.06 |
468 | 1882 | 1.677633 | TCGAGATGAGGTGGCGACA | 60.678 | 57.895 | 0.00 | 0.00 | 38.70 | 4.35 |
492 | 1906 | 2.887568 | GGCAGTGACCTCATCGCG | 60.888 | 66.667 | 0.00 | 0.00 | 43.10 | 5.87 |
582 | 1998 | 8.858003 | TCGCACAGAAAATTACAATTAAAACA | 57.142 | 26.923 | 0.00 | 0.00 | 0.00 | 2.83 |
590 | 2006 | 9.673454 | GAAAATTACAATTAAAACAGACCTCGT | 57.327 | 29.630 | 0.00 | 0.00 | 0.00 | 4.18 |
682 | 2112 | 6.145338 | ACTATACATACAGAACAAGACCCG | 57.855 | 41.667 | 0.00 | 0.00 | 0.00 | 5.28 |
960 | 2456 | 2.254152 | TCTGTAGGGTGCCTTGAGAT | 57.746 | 50.000 | 0.00 | 0.00 | 34.61 | 2.75 |
961 | 2457 | 2.111384 | TCTGTAGGGTGCCTTGAGATC | 58.889 | 52.381 | 0.00 | 0.00 | 34.61 | 2.75 |
962 | 2458 | 1.139853 | CTGTAGGGTGCCTTGAGATCC | 59.860 | 57.143 | 0.00 | 0.00 | 34.61 | 3.36 |
963 | 2459 | 1.204146 | GTAGGGTGCCTTGAGATCCA | 58.796 | 55.000 | 0.00 | 0.00 | 34.61 | 3.41 |
964 | 2460 | 1.139853 | GTAGGGTGCCTTGAGATCCAG | 59.860 | 57.143 | 0.00 | 0.00 | 34.61 | 3.86 |
966 | 2462 | 1.300963 | GGTGCCTTGAGATCCAGCA | 59.699 | 57.895 | 0.00 | 0.00 | 0.00 | 4.41 |
967 | 2463 | 0.106819 | GGTGCCTTGAGATCCAGCAT | 60.107 | 55.000 | 0.00 | 0.00 | 35.62 | 3.79 |
1026 | 2522 | 2.496899 | TTGCTTCCCCAGTTGATCTC | 57.503 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
1042 | 2538 | 1.783284 | TCTCAGCATCGTGTCACAAC | 58.217 | 50.000 | 3.42 | 0.00 | 0.00 | 3.32 |
1143 | 2660 | 2.435059 | GGAGAGGGCGAGCAACAC | 60.435 | 66.667 | 0.00 | 0.00 | 0.00 | 3.32 |
1146 | 2663 | 2.045926 | GAGGGCGAGCAACACCAT | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 3.55 |
1147 | 2664 | 2.360350 | AGGGCGAGCAACACCATG | 60.360 | 61.111 | 0.00 | 0.00 | 0.00 | 3.66 |
1149 | 2666 | 2.359850 | GGCGAGCAACACCATGGA | 60.360 | 61.111 | 21.47 | 0.00 | 0.00 | 3.41 |
1150 | 2667 | 2.690778 | GGCGAGCAACACCATGGAC | 61.691 | 63.158 | 21.47 | 1.94 | 0.00 | 4.02 |
1162 | 3936 | 1.499056 | CATGGACACGAAGCAGCAC | 59.501 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
1367 | 4150 | 1.542187 | CGTCTCCCCGGGAAAAGAGT | 61.542 | 60.000 | 26.32 | 0.00 | 0.00 | 3.24 |
1373 | 4156 | 2.033194 | CCGGGAAAAGAGTCACGCC | 61.033 | 63.158 | 0.00 | 0.00 | 43.23 | 5.68 |
1439 | 4222 | 2.524640 | TGGGTGGTGGTGCTACGA | 60.525 | 61.111 | 0.00 | 0.00 | 0.00 | 3.43 |
1666 | 4464 | 1.865970 | CGGACTAGTAGCTACGGAGTG | 59.134 | 57.143 | 28.56 | 16.88 | 45.73 | 3.51 |
1722 | 4520 | 2.223377 | GCCCGTGAACAGTAGTTTCAAG | 59.777 | 50.000 | 0.00 | 0.00 | 38.30 | 3.02 |
1754 | 4561 | 3.454375 | TCTTTCGACGGGCATTTAGATC | 58.546 | 45.455 | 0.00 | 0.00 | 0.00 | 2.75 |
1761 | 4568 | 3.214328 | ACGGGCATTTAGATCATGGTTC | 58.786 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
1765 | 4572 | 5.649395 | CGGGCATTTAGATCATGGTTCATAT | 59.351 | 40.000 | 0.00 | 0.00 | 0.00 | 1.78 |
1766 | 4573 | 6.151648 | CGGGCATTTAGATCATGGTTCATATT | 59.848 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
1767 | 4574 | 7.542025 | GGGCATTTAGATCATGGTTCATATTC | 58.458 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
1768 | 4575 | 7.363268 | GGGCATTTAGATCATGGTTCATATTCC | 60.363 | 40.741 | 0.00 | 0.00 | 0.00 | 3.01 |
1769 | 4576 | 7.177216 | GGCATTTAGATCATGGTTCATATTCCA | 59.823 | 37.037 | 0.00 | 0.00 | 38.14 | 3.53 |
1770 | 4577 | 8.746530 | GCATTTAGATCATGGTTCATATTCCAT | 58.253 | 33.333 | 0.00 | 0.00 | 44.15 | 3.41 |
1776 | 4583 | 8.663167 | AGATCATGGTTCATATTCCATACTTCA | 58.337 | 33.333 | 0.00 | 0.00 | 41.79 | 3.02 |
1777 | 4584 | 9.458727 | GATCATGGTTCATATTCCATACTTCAT | 57.541 | 33.333 | 0.00 | 0.00 | 41.79 | 2.57 |
1826 | 4633 | 9.674068 | CAGCTCTAGTATCACCAGTTATCTATA | 57.326 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
1828 | 4635 | 9.675464 | GCTCTAGTATCACCAGTTATCTATAGT | 57.325 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
1886 | 6998 | 2.719325 | CGTGATTGCTACGTTCATGG | 57.281 | 50.000 | 0.00 | 0.00 | 36.83 | 3.66 |
1887 | 6999 | 2.267426 | CGTGATTGCTACGTTCATGGA | 58.733 | 47.619 | 0.00 | 0.00 | 36.83 | 3.41 |
1888 | 7000 | 2.866156 | CGTGATTGCTACGTTCATGGAT | 59.134 | 45.455 | 0.00 | 0.00 | 36.83 | 3.41 |
1889 | 7001 | 3.060272 | CGTGATTGCTACGTTCATGGATC | 60.060 | 47.826 | 0.00 | 0.00 | 36.83 | 3.36 |
1890 | 7002 | 4.122776 | GTGATTGCTACGTTCATGGATCT | 58.877 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
1891 | 7003 | 4.572389 | GTGATTGCTACGTTCATGGATCTT | 59.428 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
1892 | 7004 | 5.753438 | GTGATTGCTACGTTCATGGATCTTA | 59.247 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
1893 | 7005 | 6.425114 | GTGATTGCTACGTTCATGGATCTTAT | 59.575 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
1894 | 7006 | 7.598869 | GTGATTGCTACGTTCATGGATCTTATA | 59.401 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
1895 | 7007 | 8.314021 | TGATTGCTACGTTCATGGATCTTATAT | 58.686 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
1896 | 7008 | 7.889589 | TTGCTACGTTCATGGATCTTATATG | 57.110 | 36.000 | 0.00 | 0.00 | 0.00 | 1.78 |
1897 | 7009 | 6.398095 | TGCTACGTTCATGGATCTTATATGG | 58.602 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1898 | 7010 | 6.210584 | TGCTACGTTCATGGATCTTATATGGA | 59.789 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
1899 | 7011 | 6.754209 | GCTACGTTCATGGATCTTATATGGAG | 59.246 | 42.308 | 0.00 | 0.00 | 0.00 | 3.86 |
1900 | 7012 | 6.918067 | ACGTTCATGGATCTTATATGGAGA | 57.082 | 37.500 | 0.00 | 0.00 | 0.00 | 3.71 |
1901 | 7013 | 7.487822 | ACGTTCATGGATCTTATATGGAGAT | 57.512 | 36.000 | 0.00 | 3.79 | 36.60 | 2.75 |
1902 | 7014 | 7.551585 | ACGTTCATGGATCTTATATGGAGATC | 58.448 | 38.462 | 16.69 | 16.69 | 45.61 | 2.75 |
1908 | 7020 | 5.330455 | GATCTTATATGGAGATCCGTGCA | 57.670 | 43.478 | 15.11 | 0.00 | 42.28 | 4.57 |
1909 | 7021 | 5.724328 | GATCTTATATGGAGATCCGTGCAA | 58.276 | 41.667 | 15.11 | 0.00 | 42.28 | 4.08 |
1910 | 7022 | 5.545063 | TCTTATATGGAGATCCGTGCAAA | 57.455 | 39.130 | 3.75 | 0.00 | 39.43 | 3.68 |
1911 | 7023 | 5.924356 | TCTTATATGGAGATCCGTGCAAAA | 58.076 | 37.500 | 3.75 | 0.00 | 39.43 | 2.44 |
1912 | 7024 | 6.533730 | TCTTATATGGAGATCCGTGCAAAAT | 58.466 | 36.000 | 3.75 | 0.00 | 39.43 | 1.82 |
1913 | 7025 | 6.998074 | TCTTATATGGAGATCCGTGCAAAATT | 59.002 | 34.615 | 3.75 | 0.00 | 39.43 | 1.82 |
1914 | 7026 | 7.502226 | TCTTATATGGAGATCCGTGCAAAATTT | 59.498 | 33.333 | 3.75 | 0.00 | 39.43 | 1.82 |
1915 | 7027 | 4.806640 | ATGGAGATCCGTGCAAAATTTT | 57.193 | 36.364 | 0.00 | 0.00 | 39.43 | 1.82 |
1916 | 7028 | 4.173036 | TGGAGATCCGTGCAAAATTTTC | 57.827 | 40.909 | 0.00 | 0.00 | 39.43 | 2.29 |
1917 | 7029 | 3.826157 | TGGAGATCCGTGCAAAATTTTCT | 59.174 | 39.130 | 0.00 | 0.00 | 39.43 | 2.52 |
1918 | 7030 | 4.280677 | TGGAGATCCGTGCAAAATTTTCTT | 59.719 | 37.500 | 0.00 | 0.00 | 39.43 | 2.52 |
1919 | 7031 | 5.221422 | TGGAGATCCGTGCAAAATTTTCTTT | 60.221 | 36.000 | 0.00 | 0.00 | 39.43 | 2.52 |
1920 | 7032 | 5.696270 | GGAGATCCGTGCAAAATTTTCTTTT | 59.304 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
1921 | 7033 | 6.202762 | GGAGATCCGTGCAAAATTTTCTTTTT | 59.797 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
1922 | 7034 | 7.383843 | GGAGATCCGTGCAAAATTTTCTTTTTA | 59.616 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
1923 | 7035 | 8.655651 | AGATCCGTGCAAAATTTTCTTTTTAA | 57.344 | 26.923 | 0.00 | 0.00 | 0.00 | 1.52 |
1924 | 7036 | 9.271828 | AGATCCGTGCAAAATTTTCTTTTTAAT | 57.728 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
1925 | 7037 | 9.877137 | GATCCGTGCAAAATTTTCTTTTTAATT | 57.123 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
1968 | 7080 | 9.561069 | AAATGTTATGTCACTTGACTTAGACTT | 57.439 | 29.630 | 10.63 | 5.90 | 44.99 | 3.01 |
1969 | 7081 | 9.561069 | AATGTTATGTCACTTGACTTAGACTTT | 57.439 | 29.630 | 10.63 | 9.94 | 44.99 | 2.66 |
1970 | 7082 | 8.365399 | TGTTATGTCACTTGACTTAGACTTTG | 57.635 | 34.615 | 10.63 | 0.00 | 44.99 | 2.77 |
1971 | 7083 | 7.985184 | TGTTATGTCACTTGACTTAGACTTTGT | 59.015 | 33.333 | 10.63 | 0.00 | 44.99 | 2.83 |
1972 | 7084 | 8.827677 | GTTATGTCACTTGACTTAGACTTTGTT | 58.172 | 33.333 | 10.63 | 0.00 | 44.99 | 2.83 |
1973 | 7085 | 7.865706 | ATGTCACTTGACTTAGACTTTGTTT | 57.134 | 32.000 | 10.63 | 0.00 | 44.99 | 2.83 |
1974 | 7086 | 8.958119 | ATGTCACTTGACTTAGACTTTGTTTA | 57.042 | 30.769 | 10.63 | 0.00 | 44.99 | 2.01 |
1975 | 7087 | 8.420374 | TGTCACTTGACTTAGACTTTGTTTAG | 57.580 | 34.615 | 10.63 | 0.00 | 44.99 | 1.85 |
1976 | 7088 | 8.038944 | TGTCACTTGACTTAGACTTTGTTTAGT | 58.961 | 33.333 | 10.63 | 0.00 | 44.99 | 2.24 |
1977 | 7089 | 8.541312 | GTCACTTGACTTAGACTTTGTTTAGTC | 58.459 | 37.037 | 1.92 | 0.00 | 41.72 | 2.59 |
1987 | 7099 | 5.517322 | ACTTTGTTTAGTCTCAGTCGAGT | 57.483 | 39.130 | 0.00 | 0.00 | 40.44 | 4.18 |
1988 | 7100 | 5.282510 | ACTTTGTTTAGTCTCAGTCGAGTG | 58.717 | 41.667 | 14.33 | 14.33 | 40.44 | 3.51 |
1989 | 7101 | 5.067413 | ACTTTGTTTAGTCTCAGTCGAGTGA | 59.933 | 40.000 | 21.32 | 21.32 | 40.44 | 3.41 |
1990 | 7102 | 4.750952 | TGTTTAGTCTCAGTCGAGTGAG | 57.249 | 45.455 | 34.80 | 34.80 | 44.71 | 3.51 |
1996 | 7108 | 3.254470 | TCTCAGTCGAGTGAGACCTAG | 57.746 | 52.381 | 37.53 | 20.04 | 46.52 | 3.02 |
1997 | 7109 | 1.668751 | CTCAGTCGAGTGAGACCTAGC | 59.331 | 57.143 | 36.52 | 0.00 | 46.02 | 3.42 |
1998 | 7110 | 0.736053 | CAGTCGAGTGAGACCTAGCC | 59.264 | 60.000 | 15.40 | 0.00 | 41.83 | 3.93 |
1999 | 7111 | 0.328592 | AGTCGAGTGAGACCTAGCCA | 59.671 | 55.000 | 0.00 | 0.00 | 41.83 | 4.75 |
2000 | 7112 | 0.452585 | GTCGAGTGAGACCTAGCCAC | 59.547 | 60.000 | 0.00 | 0.00 | 35.22 | 5.01 |
2001 | 7113 | 0.037734 | TCGAGTGAGACCTAGCCACA | 59.962 | 55.000 | 0.00 | 0.00 | 33.53 | 4.17 |
2002 | 7114 | 0.171455 | CGAGTGAGACCTAGCCACAC | 59.829 | 60.000 | 0.00 | 0.00 | 33.53 | 3.82 |
2003 | 7115 | 0.533032 | GAGTGAGACCTAGCCACACC | 59.467 | 60.000 | 0.00 | 0.00 | 33.53 | 4.16 |
2004 | 7116 | 0.905337 | AGTGAGACCTAGCCACACCC | 60.905 | 60.000 | 0.00 | 0.00 | 33.53 | 4.61 |
2005 | 7117 | 0.905337 | GTGAGACCTAGCCACACCCT | 60.905 | 60.000 | 0.00 | 0.00 | 0.00 | 4.34 |
2006 | 7118 | 0.708209 | TGAGACCTAGCCACACCCTA | 59.292 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2007 | 7119 | 1.078159 | TGAGACCTAGCCACACCCTAA | 59.922 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
2008 | 7120 | 2.185387 | GAGACCTAGCCACACCCTAAA | 58.815 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
2009 | 7121 | 2.570302 | GAGACCTAGCCACACCCTAAAA | 59.430 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2010 | 7122 | 2.983898 | AGACCTAGCCACACCCTAAAAA | 59.016 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
2011 | 7123 | 3.009143 | AGACCTAGCCACACCCTAAAAAG | 59.991 | 47.826 | 0.00 | 0.00 | 0.00 | 2.27 |
2012 | 7124 | 2.983898 | ACCTAGCCACACCCTAAAAAGA | 59.016 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
2013 | 7125 | 3.396611 | ACCTAGCCACACCCTAAAAAGAA | 59.603 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
2014 | 7126 | 4.044191 | ACCTAGCCACACCCTAAAAAGAAT | 59.956 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
2015 | 7127 | 5.252164 | ACCTAGCCACACCCTAAAAAGAATA | 59.748 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2016 | 7128 | 5.823045 | CCTAGCCACACCCTAAAAAGAATAG | 59.177 | 44.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2017 | 7129 | 5.514500 | AGCCACACCCTAAAAAGAATAGA | 57.486 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
2071 | 7183 | 1.678360 | CAGCGAAGATGTTTGTGTGC | 58.322 | 50.000 | 0.00 | 0.00 | 40.13 | 4.57 |
2073 | 7185 | 1.881973 | AGCGAAGATGTTTGTGTGCAT | 59.118 | 42.857 | 0.00 | 0.00 | 0.00 | 3.96 |
2080 | 7192 | 4.077108 | AGATGTTTGTGTGCATGATGTCT | 58.923 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
2081 | 7193 | 5.247862 | AGATGTTTGTGTGCATGATGTCTA | 58.752 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
2103 | 7215 | 7.913297 | GTCTATGCCAATTTTTAGCGTGATTAA | 59.087 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2105 | 7217 | 6.698359 | TGCCAATTTTTAGCGTGATTAAAC | 57.302 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
2109 | 7221 | 7.275560 | GCCAATTTTTAGCGTGATTAAACATCT | 59.724 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2110 | 7222 | 9.781834 | CCAATTTTTAGCGTGATTAAACATCTA | 57.218 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
2139 | 7252 | 7.903995 | ACTTTCAGCAAAAAGACAAATTTGA | 57.096 | 28.000 | 24.64 | 0.00 | 38.30 | 2.69 |
2140 | 7253 | 7.967178 | ACTTTCAGCAAAAAGACAAATTTGAG | 58.033 | 30.769 | 24.64 | 8.44 | 38.30 | 3.02 |
2141 | 7254 | 6.907206 | TTCAGCAAAAAGACAAATTTGAGG | 57.093 | 33.333 | 24.64 | 0.00 | 38.50 | 3.86 |
2142 | 7255 | 5.976458 | TCAGCAAAAAGACAAATTTGAGGT | 58.024 | 33.333 | 24.64 | 2.04 | 38.50 | 3.85 |
2144 | 7257 | 6.878389 | TCAGCAAAAAGACAAATTTGAGGTTT | 59.122 | 30.769 | 24.64 | 15.78 | 38.50 | 3.27 |
2145 | 7258 | 6.962678 | CAGCAAAAAGACAAATTTGAGGTTTG | 59.037 | 34.615 | 24.64 | 23.19 | 38.50 | 2.93 |
2146 | 7259 | 6.093909 | AGCAAAAAGACAAATTTGAGGTTTGG | 59.906 | 34.615 | 24.64 | 16.67 | 40.08 | 3.28 |
2147 | 7260 | 6.128035 | GCAAAAAGACAAATTTGAGGTTTGGT | 60.128 | 34.615 | 24.64 | 9.27 | 40.08 | 3.67 |
2152 | 7266 | 8.716646 | AAGACAAATTTGAGGTTTGGTAAAAG | 57.283 | 30.769 | 24.64 | 0.00 | 40.08 | 2.27 |
2153 | 7267 | 7.847096 | AGACAAATTTGAGGTTTGGTAAAAGT | 58.153 | 30.769 | 24.64 | 0.00 | 40.08 | 2.66 |
2160 | 7274 | 8.950208 | TTTGAGGTTTGGTAAAAGTTTATTGG | 57.050 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
2173 | 7287 | 8.956533 | AAAAGTTTATTGGTTATGCACTGTTT | 57.043 | 26.923 | 0.00 | 0.00 | 0.00 | 2.83 |
2176 | 7290 | 6.266558 | AGTTTATTGGTTATGCACTGTTTGGA | 59.733 | 34.615 | 0.00 | 0.00 | 0.00 | 3.53 |
2177 | 7291 | 4.519540 | ATTGGTTATGCACTGTTTGGAC | 57.480 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
2178 | 7292 | 2.235016 | TGGTTATGCACTGTTTGGACC | 58.765 | 47.619 | 0.00 | 0.00 | 0.00 | 4.46 |
2179 | 7293 | 1.199097 | GGTTATGCACTGTTTGGACCG | 59.801 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
2181 | 7295 | 0.398696 | TATGCACTGTTTGGACCGGT | 59.601 | 50.000 | 6.92 | 6.92 | 0.00 | 5.28 |
2184 | 7298 | 1.310904 | GCACTGTTTGGACCGGTTTA | 58.689 | 50.000 | 9.42 | 0.00 | 0.00 | 2.01 |
2185 | 7299 | 1.265905 | GCACTGTTTGGACCGGTTTAG | 59.734 | 52.381 | 9.42 | 3.88 | 0.00 | 1.85 |
2189 | 7303 | 4.018490 | ACTGTTTGGACCGGTTTAGTTTT | 58.982 | 39.130 | 9.42 | 0.00 | 0.00 | 2.43 |
2222 | 7336 | 5.450137 | GCTACTAAGATCTCCAAACACGCTA | 60.450 | 44.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2223 | 7337 | 5.000012 | ACTAAGATCTCCAAACACGCTAG | 58.000 | 43.478 | 0.00 | 0.00 | 0.00 | 3.42 |
2229 | 7343 | 5.352569 | AGATCTCCAAACACGCTAGAAATTG | 59.647 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2237 | 7351 | 1.299541 | CGCTAGAAATTGGCACGGAT | 58.700 | 50.000 | 0.00 | 0.00 | 31.77 | 4.18 |
2255 | 7369 | 3.622612 | CGGATCACATGCACTCAAACATA | 59.377 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
2258 | 7372 | 6.204359 | GGATCACATGCACTCAAACATATTC | 58.796 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2260 | 7374 | 4.398988 | TCACATGCACTCAAACATATTCCC | 59.601 | 41.667 | 0.00 | 0.00 | 0.00 | 3.97 |
2261 | 7375 | 4.158209 | CACATGCACTCAAACATATTCCCA | 59.842 | 41.667 | 0.00 | 0.00 | 0.00 | 4.37 |
2263 | 7377 | 2.754552 | TGCACTCAAACATATTCCCAGC | 59.245 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
2351 | 7467 | 0.723981 | GCTCGAGTGCAGAATTGGAC | 59.276 | 55.000 | 15.13 | 0.00 | 45.09 | 4.02 |
2364 | 7480 | 4.398988 | CAGAATTGGACATTCGGGAATCAA | 59.601 | 41.667 | 0.00 | 0.00 | 33.51 | 2.57 |
2366 | 7482 | 5.300286 | AGAATTGGACATTCGGGAATCAATC | 59.700 | 40.000 | 7.06 | 0.31 | 33.51 | 2.67 |
2370 | 7486 | 4.080356 | TGGACATTCGGGAATCAATCTCTT | 60.080 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
2398 | 7517 | 7.786178 | TTAATAACAGGAATCAATCTCGGTG | 57.214 | 36.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2402 | 7521 | 3.517901 | ACAGGAATCAATCTCGGTGGTTA | 59.482 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
2414 | 7533 | 4.992319 | TCTCGGTGGTTACAAACATTACTG | 59.008 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
2415 | 7534 | 4.958509 | TCGGTGGTTACAAACATTACTGA | 58.041 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
2419 | 7538 | 5.529800 | GGTGGTTACAAACATTACTGACAGT | 59.470 | 40.000 | 13.68 | 13.68 | 0.00 | 3.55 |
2444 | 7709 | 5.299028 | TCCGTGTAAACTATAGGCGACAATA | 59.701 | 40.000 | 4.43 | 0.00 | 0.00 | 1.90 |
2449 | 7714 | 9.467258 | GTGTAAACTATAGGCGACAATATTGTA | 57.533 | 33.333 | 20.83 | 5.78 | 42.43 | 2.41 |
2489 | 7754 | 5.030147 | TGGGATCACAGGTTGTCTAATACT | 58.970 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
2491 | 7756 | 6.097839 | TGGGATCACAGGTTGTCTAATACTAC | 59.902 | 42.308 | 0.00 | 0.00 | 33.63 | 2.73 |
2496 | 7761 | 9.787435 | ATCACAGGTTGTCTAATACTACAAAAA | 57.213 | 29.630 | 0.00 | 0.00 | 37.35 | 1.94 |
2587 | 7860 | 8.665643 | TTAGAAGAACAAAAGTTACAATCGGA | 57.334 | 30.769 | 0.00 | 0.00 | 0.00 | 4.55 |
2613 | 7886 | 5.239744 | CAGTAGATCACCTAGCGACAACTAT | 59.760 | 44.000 | 0.00 | 0.00 | 0.00 | 2.12 |
2621 | 7894 | 3.795101 | CCTAGCGACAACTATAAACACCG | 59.205 | 47.826 | 0.00 | 0.00 | 0.00 | 4.94 |
2625 | 7898 | 3.841643 | CGACAACTATAAACACCGGAGT | 58.158 | 45.455 | 9.46 | 2.22 | 0.00 | 3.85 |
2638 | 7911 | 0.951040 | CCGGAGTGAGTCAAAGGCAC | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2639 | 7912 | 0.249868 | CGGAGTGAGTCAAAGGCACA | 60.250 | 55.000 | 0.00 | 0.00 | 35.08 | 4.57 |
2640 | 7913 | 1.609061 | CGGAGTGAGTCAAAGGCACAT | 60.609 | 52.381 | 0.00 | 0.00 | 35.08 | 3.21 |
2645 | 7918 | 0.716108 | GAGTCAAAGGCACATCGTCG | 59.284 | 55.000 | 0.00 | 0.00 | 0.00 | 5.12 |
2651 | 7924 | 0.246360 | AAGGCACATCGTCGTCATCA | 59.754 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
2652 | 7925 | 0.461548 | AGGCACATCGTCGTCATCAT | 59.538 | 50.000 | 0.00 | 0.00 | 0.00 | 2.45 |
2659 | 7932 | 1.763968 | TCGTCGTCATCATCCCTCTT | 58.236 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2662 | 7935 | 2.159240 | CGTCGTCATCATCCCTCTTTCA | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2665 | 7938 | 2.555199 | GTCATCATCCCTCTTTCACCG | 58.445 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
2669 | 7942 | 0.905357 | CATCCCTCTTTCACCGGAGT | 59.095 | 55.000 | 9.46 | 0.00 | 0.00 | 3.85 |
2671 | 7944 | 1.215647 | CCCTCTTTCACCGGAGTCG | 59.784 | 63.158 | 9.46 | 0.00 | 0.00 | 4.18 |
2692 | 7965 | 7.803724 | AGTCGGAAAATGTTGTTGTAATAGAC | 58.196 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
2696 | 7969 | 7.744715 | CGGAAAATGTTGTTGTAATAGACAGTC | 59.255 | 37.037 | 0.00 | 0.00 | 39.88 | 3.51 |
2744 | 8017 | 1.816224 | GGACCAACGCACCATAACAAT | 59.184 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
2751 | 8024 | 4.893424 | ACGCACCATAACAATAATCACC | 57.107 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
2763 | 8036 | 2.509052 | TAATCACCGCCGATGAAGAG | 57.491 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2766 | 8039 | 0.173481 | TCACCGCCGATGAAGAGAAG | 59.827 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2775 | 8048 | 4.112634 | CCGATGAAGAGAAGCGTAAATCA | 58.887 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2788 | 8061 | 7.595130 | AGAAGCGTAAATCAAAAGAATCAAACC | 59.405 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2789 | 8062 | 6.744112 | AGCGTAAATCAAAAGAATCAAACCA | 58.256 | 32.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2858 | 8131 | 2.546368 | CGAAAGAACAACACCCATCGAA | 59.454 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 1.733041 | TAACGCAGAGCACTGACGC | 60.733 | 57.895 | 15.88 | 0.00 | 46.03 | 5.19 |
1 | 2 | 1.665544 | CGTAACGCAGAGCACTGACG | 61.666 | 60.000 | 15.88 | 18.34 | 46.03 | 4.35 |
3 | 4 | 0.876399 | TACGTAACGCAGAGCACTGA | 59.124 | 50.000 | 15.88 | 0.00 | 46.03 | 3.41 |
4 | 5 | 1.909376 | ATACGTAACGCAGAGCACTG | 58.091 | 50.000 | 6.80 | 6.80 | 45.91 | 3.66 |
5 | 6 | 2.649331 | AATACGTAACGCAGAGCACT | 57.351 | 45.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6 | 7 | 2.787680 | CCTAATACGTAACGCAGAGCAC | 59.212 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
8 | 9 | 1.785430 | GCCTAATACGTAACGCAGAGC | 59.215 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
9 | 10 | 2.041966 | CGCCTAATACGTAACGCAGAG | 58.958 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
10 | 11 | 1.861202 | GCGCCTAATACGTAACGCAGA | 60.861 | 52.381 | 18.75 | 0.00 | 45.25 | 4.26 |
11 | 12 | 0.501435 | GCGCCTAATACGTAACGCAG | 59.499 | 55.000 | 18.75 | 7.08 | 45.25 | 5.18 |
12 | 13 | 2.580661 | GCGCCTAATACGTAACGCA | 58.419 | 52.632 | 18.75 | 0.00 | 45.25 | 5.24 |
13 | 14 | 0.922717 | TTGCGCCTAATACGTAACGC | 59.077 | 50.000 | 4.18 | 17.57 | 46.05 | 4.84 |
14 | 15 | 2.187707 | ACTTGCGCCTAATACGTAACG | 58.812 | 47.619 | 4.18 | 0.19 | 31.83 | 3.18 |
15 | 16 | 3.301388 | CGAACTTGCGCCTAATACGTAAC | 60.301 | 47.826 | 4.18 | 0.00 | 31.83 | 2.50 |
16 | 17 | 2.853594 | CGAACTTGCGCCTAATACGTAA | 59.146 | 45.455 | 4.18 | 0.00 | 34.05 | 3.18 |
17 | 18 | 2.453080 | CGAACTTGCGCCTAATACGTA | 58.547 | 47.619 | 4.18 | 0.00 | 0.00 | 3.57 |
19 | 20 | 0.575390 | CCGAACTTGCGCCTAATACG | 59.425 | 55.000 | 4.18 | 3.91 | 0.00 | 3.06 |
20 | 21 | 1.326548 | CACCGAACTTGCGCCTAATAC | 59.673 | 52.381 | 4.18 | 0.00 | 0.00 | 1.89 |
22 | 23 | 1.024579 | CCACCGAACTTGCGCCTAAT | 61.025 | 55.000 | 4.18 | 0.00 | 0.00 | 1.73 |
24 | 25 | 2.047655 | CCACCGAACTTGCGCCTA | 60.048 | 61.111 | 4.18 | 0.00 | 0.00 | 3.93 |
25 | 26 | 3.767630 | AACCACCGAACTTGCGCCT | 62.768 | 57.895 | 4.18 | 0.00 | 0.00 | 5.52 |
26 | 27 | 2.344521 | AAAACCACCGAACTTGCGCC | 62.345 | 55.000 | 4.18 | 0.00 | 0.00 | 6.53 |
27 | 28 | 0.526739 | AAAAACCACCGAACTTGCGC | 60.527 | 50.000 | 0.00 | 0.00 | 0.00 | 6.09 |
28 | 29 | 3.633573 | AAAAACCACCGAACTTGCG | 57.366 | 47.368 | 0.00 | 0.00 | 0.00 | 4.85 |
44 | 45 | 4.382470 | CCACATTTGAACCAGGACACAAAA | 60.382 | 41.667 | 0.00 | 0.00 | 36.19 | 2.44 |
45 | 46 | 3.131933 | CCACATTTGAACCAGGACACAAA | 59.868 | 43.478 | 0.00 | 3.28 | 36.82 | 2.83 |
46 | 47 | 2.692557 | CCACATTTGAACCAGGACACAA | 59.307 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
48 | 49 | 2.306847 | ACCACATTTGAACCAGGACAC | 58.693 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
50 | 51 | 3.482436 | TGTACCACATTTGAACCAGGAC | 58.518 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
51 | 52 | 3.866703 | TGTACCACATTTGAACCAGGA | 57.133 | 42.857 | 0.00 | 0.00 | 0.00 | 3.86 |
52 | 53 | 4.340950 | ACTTTGTACCACATTTGAACCAGG | 59.659 | 41.667 | 0.00 | 0.00 | 0.00 | 4.45 |
53 | 54 | 5.514274 | ACTTTGTACCACATTTGAACCAG | 57.486 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
54 | 55 | 5.186021 | ACAACTTTGTACCACATTTGAACCA | 59.814 | 36.000 | 0.00 | 0.00 | 40.16 | 3.67 |
55 | 56 | 5.656480 | ACAACTTTGTACCACATTTGAACC | 58.344 | 37.500 | 0.00 | 0.00 | 40.16 | 3.62 |
56 | 57 | 7.221259 | GGTAACAACTTTGTACCACATTTGAAC | 59.779 | 37.037 | 12.27 | 0.00 | 41.31 | 3.18 |
58 | 59 | 6.183360 | GGGTAACAACTTTGTACCACATTTGA | 60.183 | 38.462 | 16.14 | 0.00 | 41.31 | 2.69 |
63 | 64 | 4.506937 | AGGGTAACAACTTTGTACCACA | 57.493 | 40.909 | 16.14 | 0.00 | 41.31 | 4.17 |
64 | 65 | 4.453478 | GCTAGGGTAACAACTTTGTACCAC | 59.547 | 45.833 | 16.14 | 7.50 | 41.31 | 4.16 |
66 | 67 | 4.005650 | GGCTAGGGTAACAACTTTGTACC | 58.994 | 47.826 | 0.00 | 4.13 | 41.31 | 3.34 |
67 | 68 | 4.005650 | GGGCTAGGGTAACAACTTTGTAC | 58.994 | 47.826 | 0.00 | 0.00 | 41.31 | 2.90 |
68 | 69 | 3.009363 | GGGGCTAGGGTAACAACTTTGTA | 59.991 | 47.826 | 0.00 | 0.00 | 41.31 | 2.41 |
69 | 70 | 2.224942 | GGGGCTAGGGTAACAACTTTGT | 60.225 | 50.000 | 0.00 | 0.00 | 44.72 | 2.83 |
70 | 71 | 2.224917 | TGGGGCTAGGGTAACAACTTTG | 60.225 | 50.000 | 0.00 | 0.00 | 39.74 | 2.77 |
72 | 73 | 1.750022 | TGGGGCTAGGGTAACAACTT | 58.250 | 50.000 | 0.00 | 0.00 | 39.74 | 2.66 |
73 | 74 | 1.633945 | CTTGGGGCTAGGGTAACAACT | 59.366 | 52.381 | 0.00 | 0.00 | 39.74 | 3.16 |
77 | 78 | 1.209747 | CAGACTTGGGGCTAGGGTAAC | 59.790 | 57.143 | 0.00 | 0.00 | 0.00 | 2.50 |
78 | 79 | 1.580059 | CAGACTTGGGGCTAGGGTAA | 58.420 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
90 | 91 | 1.775385 | ACCCAAAACCACCAGACTTG | 58.225 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
91 | 92 | 3.673543 | TTACCCAAAACCACCAGACTT | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
92 | 93 | 3.673543 | TTTACCCAAAACCACCAGACT | 57.326 | 42.857 | 0.00 | 0.00 | 0.00 | 3.24 |
95 | 96 | 5.536916 | TGAGTTATTTACCCAAAACCACCAG | 59.463 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
97 | 98 | 6.408107 | TTGAGTTATTTACCCAAAACCACC | 57.592 | 37.500 | 0.00 | 0.00 | 0.00 | 4.61 |
98 | 99 | 8.719560 | TTTTTGAGTTATTTACCCAAAACCAC | 57.280 | 30.769 | 0.00 | 0.00 | 42.05 | 4.16 |
99 | 100 | 9.907229 | AATTTTTGAGTTATTTACCCAAAACCA | 57.093 | 25.926 | 0.00 | 0.00 | 42.05 | 3.67 |
101 | 102 | 9.658475 | GCAATTTTTGAGTTATTTACCCAAAAC | 57.342 | 29.630 | 0.00 | 0.00 | 42.05 | 2.43 |
102 | 103 | 9.620259 | AGCAATTTTTGAGTTATTTACCCAAAA | 57.380 | 25.926 | 0.00 | 0.00 | 41.07 | 2.44 |
104 | 105 | 9.050601 | CAAGCAATTTTTGAGTTATTTACCCAA | 57.949 | 29.630 | 0.00 | 0.00 | 0.00 | 4.12 |
105 | 106 | 7.172361 | GCAAGCAATTTTTGAGTTATTTACCCA | 59.828 | 33.333 | 4.11 | 0.00 | 0.00 | 4.51 |
107 | 108 | 8.310406 | AGCAAGCAATTTTTGAGTTATTTACC | 57.690 | 30.769 | 4.11 | 0.00 | 0.00 | 2.85 |
110 | 111 | 9.492973 | ACATAGCAAGCAATTTTTGAGTTATTT | 57.507 | 25.926 | 4.11 | 0.00 | 0.00 | 1.40 |
112 | 113 | 9.492973 | AAACATAGCAAGCAATTTTTGAGTTAT | 57.507 | 25.926 | 4.11 | 0.00 | 0.00 | 1.89 |
114 | 115 | 7.495279 | TGAAACATAGCAAGCAATTTTTGAGTT | 59.505 | 29.630 | 4.11 | 0.00 | 0.00 | 3.01 |
115 | 116 | 6.985645 | TGAAACATAGCAAGCAATTTTTGAGT | 59.014 | 30.769 | 4.11 | 0.00 | 0.00 | 3.41 |
116 | 117 | 7.410800 | TGAAACATAGCAAGCAATTTTTGAG | 57.589 | 32.000 | 4.11 | 0.00 | 0.00 | 3.02 |
117 | 118 | 7.710044 | TCTTGAAACATAGCAAGCAATTTTTGA | 59.290 | 29.630 | 0.00 | 0.00 | 40.89 | 2.69 |
118 | 119 | 7.853524 | TCTTGAAACATAGCAAGCAATTTTTG | 58.146 | 30.769 | 0.00 | 0.00 | 40.89 | 2.44 |
119 | 120 | 8.611654 | ATCTTGAAACATAGCAAGCAATTTTT | 57.388 | 26.923 | 0.00 | 0.00 | 40.89 | 1.94 |
120 | 121 | 9.709495 | TTATCTTGAAACATAGCAAGCAATTTT | 57.291 | 25.926 | 0.00 | 0.00 | 40.89 | 1.82 |
121 | 122 | 9.880157 | ATTATCTTGAAACATAGCAAGCAATTT | 57.120 | 25.926 | 0.00 | 0.00 | 40.89 | 1.82 |
122 | 123 | 9.309516 | CATTATCTTGAAACATAGCAAGCAATT | 57.690 | 29.630 | 0.00 | 0.00 | 40.89 | 2.32 |
123 | 124 | 8.689061 | TCATTATCTTGAAACATAGCAAGCAAT | 58.311 | 29.630 | 0.00 | 0.00 | 40.89 | 3.56 |
124 | 125 | 8.054152 | TCATTATCTTGAAACATAGCAAGCAA | 57.946 | 30.769 | 0.00 | 0.00 | 40.89 | 3.91 |
125 | 126 | 7.628769 | TCATTATCTTGAAACATAGCAAGCA | 57.371 | 32.000 | 0.00 | 0.00 | 40.89 | 3.91 |
126 | 127 | 8.915871 | TTTCATTATCTTGAAACATAGCAAGC | 57.084 | 30.769 | 0.00 | 0.00 | 39.91 | 4.01 |
151 | 152 | 9.768662 | GGATGGAAAAACATGCTCATATTATTT | 57.231 | 29.630 | 0.00 | 0.00 | 36.42 | 1.40 |
152 | 153 | 8.084073 | CGGATGGAAAAACATGCTCATATTATT | 58.916 | 33.333 | 0.00 | 0.00 | 37.09 | 1.40 |
153 | 154 | 7.448161 | TCGGATGGAAAAACATGCTCATATTAT | 59.552 | 33.333 | 0.00 | 0.00 | 37.09 | 1.28 |
154 | 155 | 6.770303 | TCGGATGGAAAAACATGCTCATATTA | 59.230 | 34.615 | 0.00 | 0.00 | 37.09 | 0.98 |
156 | 157 | 5.132502 | TCGGATGGAAAAACATGCTCATAT | 58.867 | 37.500 | 0.00 | 0.00 | 37.09 | 1.78 |
157 | 158 | 4.522114 | TCGGATGGAAAAACATGCTCATA | 58.478 | 39.130 | 0.00 | 0.00 | 37.09 | 2.15 |
158 | 159 | 3.355378 | TCGGATGGAAAAACATGCTCAT | 58.645 | 40.909 | 0.00 | 0.00 | 37.09 | 2.90 |
159 | 160 | 2.789213 | TCGGATGGAAAAACATGCTCA | 58.211 | 42.857 | 0.00 | 0.00 | 37.09 | 4.26 |
160 | 161 | 3.848272 | TTCGGATGGAAAAACATGCTC | 57.152 | 42.857 | 0.00 | 0.00 | 37.09 | 4.26 |
169 | 170 | 4.912586 | TGTGGATAGTTTTCGGATGGAAA | 58.087 | 39.130 | 0.00 | 0.00 | 42.75 | 3.13 |
170 | 171 | 4.561500 | TGTGGATAGTTTTCGGATGGAA | 57.438 | 40.909 | 0.00 | 0.00 | 0.00 | 3.53 |
171 | 172 | 4.771114 | ATGTGGATAGTTTTCGGATGGA | 57.229 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
172 | 173 | 5.835113 | AAATGTGGATAGTTTTCGGATGG | 57.165 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
173 | 174 | 6.095440 | AGGAAAATGTGGATAGTTTTCGGATG | 59.905 | 38.462 | 0.00 | 0.00 | 40.80 | 3.51 |
175 | 176 | 5.566469 | AGGAAAATGTGGATAGTTTTCGGA | 58.434 | 37.500 | 0.00 | 0.00 | 40.80 | 4.55 |
176 | 177 | 5.897377 | AGGAAAATGTGGATAGTTTTCGG | 57.103 | 39.130 | 0.00 | 0.00 | 40.80 | 4.30 |
177 | 178 | 7.145932 | AGAAGGAAAATGTGGATAGTTTTCG | 57.854 | 36.000 | 0.00 | 0.00 | 40.80 | 3.46 |
181 | 182 | 8.803235 | GGTTTAAGAAGGAAAATGTGGATAGTT | 58.197 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
182 | 183 | 7.120726 | CGGTTTAAGAAGGAAAATGTGGATAGT | 59.879 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
183 | 184 | 7.120726 | ACGGTTTAAGAAGGAAAATGTGGATAG | 59.879 | 37.037 | 0.00 | 0.00 | 0.00 | 2.08 |
185 | 186 | 5.773176 | ACGGTTTAAGAAGGAAAATGTGGAT | 59.227 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
187 | 188 | 5.219633 | CACGGTTTAAGAAGGAAAATGTGG | 58.780 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
188 | 189 | 5.219633 | CCACGGTTTAAGAAGGAAAATGTG | 58.780 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
190 | 191 | 4.234574 | GCCACGGTTTAAGAAGGAAAATG | 58.765 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
191 | 192 | 3.892588 | TGCCACGGTTTAAGAAGGAAAAT | 59.107 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
192 | 193 | 3.288964 | TGCCACGGTTTAAGAAGGAAAA | 58.711 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
193 | 194 | 2.933573 | TGCCACGGTTTAAGAAGGAAA | 58.066 | 42.857 | 0.00 | 0.00 | 0.00 | 3.13 |
194 | 195 | 2.642154 | TGCCACGGTTTAAGAAGGAA | 57.358 | 45.000 | 0.00 | 0.00 | 0.00 | 3.36 |
195 | 196 | 2.642154 | TTGCCACGGTTTAAGAAGGA | 57.358 | 45.000 | 0.00 | 0.00 | 0.00 | 3.36 |
196 | 197 | 2.621526 | ACTTTGCCACGGTTTAAGAAGG | 59.378 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
197 | 198 | 3.314080 | TGACTTTGCCACGGTTTAAGAAG | 59.686 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
198 | 199 | 3.280295 | TGACTTTGCCACGGTTTAAGAA | 58.720 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
200 | 201 | 3.701532 | TTGACTTTGCCACGGTTTAAG | 57.298 | 42.857 | 0.00 | 0.00 | 0.00 | 1.85 |
201 | 202 | 3.632604 | TCATTGACTTTGCCACGGTTTAA | 59.367 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
203 | 204 | 2.028130 | TCATTGACTTTGCCACGGTTT | 58.972 | 42.857 | 0.00 | 0.00 | 0.00 | 3.27 |
204 | 205 | 1.686355 | TCATTGACTTTGCCACGGTT | 58.314 | 45.000 | 0.00 | 0.00 | 0.00 | 4.44 |
206 | 207 | 2.791383 | TTTCATTGACTTTGCCACGG | 57.209 | 45.000 | 0.00 | 0.00 | 0.00 | 4.94 |
207 | 208 | 3.242712 | GTGTTTTCATTGACTTTGCCACG | 59.757 | 43.478 | 0.00 | 0.00 | 0.00 | 4.94 |
208 | 209 | 4.268405 | CAGTGTTTTCATTGACTTTGCCAC | 59.732 | 41.667 | 0.00 | 0.00 | 39.43 | 5.01 |
209 | 210 | 4.159321 | TCAGTGTTTTCATTGACTTTGCCA | 59.841 | 37.500 | 0.00 | 0.00 | 40.67 | 4.92 |
210 | 211 | 4.681744 | TCAGTGTTTTCATTGACTTTGCC | 58.318 | 39.130 | 0.00 | 0.00 | 40.67 | 4.52 |
211 | 212 | 9.793252 | ATATATCAGTGTTTTCATTGACTTTGC | 57.207 | 29.630 | 0.00 | 0.00 | 46.35 | 3.68 |
224 | 225 | 8.506437 | CGGATGCATACAAATATATCAGTGTTT | 58.494 | 33.333 | 10.18 | 0.00 | 0.00 | 2.83 |
225 | 226 | 7.877612 | TCGGATGCATACAAATATATCAGTGTT | 59.122 | 33.333 | 10.18 | 0.00 | 0.00 | 3.32 |
231 | 232 | 7.307493 | TGCTTCGGATGCATACAAATATATC | 57.693 | 36.000 | 13.84 | 0.00 | 35.31 | 1.63 |
232 | 233 | 7.627088 | GCTTGCTTCGGATGCATACAAATATAT | 60.627 | 37.037 | 17.81 | 0.00 | 40.34 | 0.86 |
296 | 297 | 4.187694 | CTGACTTGGAGCATAGAAGTTCC | 58.812 | 47.826 | 0.00 | 0.00 | 39.14 | 3.62 |
305 | 306 | 0.035630 | GCCTGACTGACTTGGAGCAT | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
306 | 307 | 1.123861 | AGCCTGACTGACTTGGAGCA | 61.124 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
308 | 309 | 1.805869 | CAAGCCTGACTGACTTGGAG | 58.194 | 55.000 | 1.17 | 0.00 | 37.68 | 3.86 |
312 | 313 | 1.763770 | CCCCAAGCCTGACTGACTT | 59.236 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
341 | 342 | 5.327091 | CAGCAAGTTCTGGTTCATTAATCG | 58.673 | 41.667 | 0.00 | 0.00 | 31.85 | 3.34 |
349 | 350 | 3.375782 | AATTGCAGCAAGTTCTGGTTC | 57.624 | 42.857 | 14.47 | 0.00 | 34.74 | 3.62 |
412 | 1825 | 3.868077 | GCGATGAGAGCACTAATGAACTT | 59.132 | 43.478 | 0.00 | 0.00 | 34.19 | 2.66 |
420 | 1833 | 0.395724 | TCCAGGCGATGAGAGCACTA | 60.396 | 55.000 | 0.00 | 0.00 | 36.08 | 2.74 |
425 | 1838 | 1.617357 | TGATGATCCAGGCGATGAGAG | 59.383 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
446 | 1860 | 2.808315 | CCACCTCATCTCGACCCG | 59.192 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
492 | 1906 | 3.944422 | AAATTACGCGTGATGATCCAC | 57.056 | 42.857 | 24.59 | 0.00 | 0.00 | 4.02 |
590 | 2006 | 0.885879 | ACAGTACGCGATCTGAACCA | 59.114 | 50.000 | 29.59 | 0.00 | 35.84 | 3.67 |
654 | 2084 | 9.601217 | GGTCTTGTTCTGTATGTATAGTTGATT | 57.399 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
656 | 2086 | 7.553334 | GGGTCTTGTTCTGTATGTATAGTTGA | 58.447 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
657 | 2087 | 6.475727 | CGGGTCTTGTTCTGTATGTATAGTTG | 59.524 | 42.308 | 0.00 | 0.00 | 0.00 | 3.16 |
682 | 2112 | 3.644884 | TTCTTCAGGACTTGACGACTC | 57.355 | 47.619 | 0.00 | 0.00 | 34.19 | 3.36 |
960 | 2456 | 0.984961 | AGCTAGGCTGGAATGCTGGA | 60.985 | 55.000 | 0.43 | 0.00 | 37.57 | 3.86 |
961 | 2457 | 1.530771 | AGCTAGGCTGGAATGCTGG | 59.469 | 57.895 | 0.43 | 0.00 | 37.57 | 4.85 |
1007 | 2503 | 1.704628 | TGAGATCAACTGGGGAAGCAA | 59.295 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
1026 | 2522 | 1.193203 | GTGAGTTGTGACACGATGCTG | 59.807 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 |
1042 | 2538 | 0.538057 | AGGTGCATGTGGGTTGTGAG | 60.538 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1143 | 2660 | 1.672030 | TGCTGCTTCGTGTCCATGG | 60.672 | 57.895 | 4.97 | 4.97 | 0.00 | 3.66 |
1146 | 2663 | 2.280797 | GGTGCTGCTTCGTGTCCA | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
1147 | 2664 | 2.029844 | GAGGTGCTGCTTCGTGTCC | 61.030 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
1149 | 2666 | 2.356313 | CGAGGTGCTGCTTCGTGT | 60.356 | 61.111 | 0.00 | 0.00 | 41.08 | 4.49 |
1150 | 2667 | 3.782244 | GCGAGGTGCTGCTTCGTG | 61.782 | 66.667 | 17.79 | 1.79 | 46.58 | 4.35 |
1666 | 4464 | 1.594862 | CGCTCTGATTGATTCGTTCCC | 59.405 | 52.381 | 0.00 | 0.00 | 0.00 | 3.97 |
1738 | 4536 | 1.800586 | CCATGATCTAAATGCCCGTCG | 59.199 | 52.381 | 0.00 | 0.00 | 0.00 | 5.12 |
1754 | 4561 | 9.730705 | AGTATGAAGTATGGAATATGAACCATG | 57.269 | 33.333 | 15.26 | 0.00 | 45.08 | 3.66 |
1761 | 4568 | 8.839343 | TGTTTGCAGTATGAAGTATGGAATATG | 58.161 | 33.333 | 0.00 | 0.00 | 39.69 | 1.78 |
1765 | 4572 | 7.537715 | CATTGTTTGCAGTATGAAGTATGGAA | 58.462 | 34.615 | 0.00 | 0.00 | 39.69 | 3.53 |
1766 | 4573 | 7.087409 | CATTGTTTGCAGTATGAAGTATGGA | 57.913 | 36.000 | 0.00 | 0.00 | 39.69 | 3.41 |
1826 | 4633 | 9.836864 | TTCACTTGATGTATCATTATGCTTACT | 57.163 | 29.630 | 0.00 | 0.00 | 36.56 | 2.24 |
1828 | 4635 | 9.612066 | TGTTCACTTGATGTATCATTATGCTTA | 57.388 | 29.630 | 0.00 | 0.00 | 36.56 | 3.09 |
1829 | 4636 | 8.510243 | TGTTCACTTGATGTATCATTATGCTT | 57.490 | 30.769 | 0.00 | 0.00 | 36.56 | 3.91 |
1868 | 6980 | 4.122776 | AGATCCATGAACGTAGCAATCAC | 58.877 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
1869 | 6981 | 4.406648 | AGATCCATGAACGTAGCAATCA | 57.593 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
1870 | 6982 | 8.598924 | CATATAAGATCCATGAACGTAGCAATC | 58.401 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
1871 | 6983 | 7.550551 | CCATATAAGATCCATGAACGTAGCAAT | 59.449 | 37.037 | 0.00 | 0.00 | 0.00 | 3.56 |
1872 | 6984 | 6.873605 | CCATATAAGATCCATGAACGTAGCAA | 59.126 | 38.462 | 0.00 | 0.00 | 0.00 | 3.91 |
1873 | 6985 | 6.210584 | TCCATATAAGATCCATGAACGTAGCA | 59.789 | 38.462 | 0.00 | 0.00 | 0.00 | 3.49 |
1874 | 6986 | 6.631016 | TCCATATAAGATCCATGAACGTAGC | 58.369 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
1875 | 6987 | 8.056407 | TCTCCATATAAGATCCATGAACGTAG | 57.944 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
1876 | 6988 | 8.595362 | ATCTCCATATAAGATCCATGAACGTA | 57.405 | 34.615 | 0.00 | 0.00 | 0.00 | 3.57 |
1877 | 6989 | 6.918067 | TCTCCATATAAGATCCATGAACGT | 57.082 | 37.500 | 0.00 | 0.00 | 0.00 | 3.99 |
1886 | 6998 | 5.330455 | TGCACGGATCTCCATATAAGATC | 57.670 | 43.478 | 14.68 | 14.68 | 45.54 | 2.75 |
1887 | 6999 | 5.745312 | TTGCACGGATCTCCATATAAGAT | 57.255 | 39.130 | 0.00 | 0.53 | 36.19 | 2.40 |
1888 | 7000 | 5.545063 | TTTGCACGGATCTCCATATAAGA | 57.455 | 39.130 | 0.00 | 0.00 | 35.14 | 2.10 |
1889 | 7001 | 6.808008 | ATTTTGCACGGATCTCCATATAAG | 57.192 | 37.500 | 0.00 | 0.00 | 35.14 | 1.73 |
1890 | 7002 | 7.581213 | AAATTTTGCACGGATCTCCATATAA | 57.419 | 32.000 | 0.00 | 0.00 | 35.14 | 0.98 |
1891 | 7003 | 7.502226 | AGAAAATTTTGCACGGATCTCCATATA | 59.498 | 33.333 | 8.47 | 0.00 | 35.14 | 0.86 |
1892 | 7004 | 6.322201 | AGAAAATTTTGCACGGATCTCCATAT | 59.678 | 34.615 | 8.47 | 0.00 | 35.14 | 1.78 |
1893 | 7005 | 5.652014 | AGAAAATTTTGCACGGATCTCCATA | 59.348 | 36.000 | 8.47 | 0.00 | 35.14 | 2.74 |
1894 | 7006 | 4.463891 | AGAAAATTTTGCACGGATCTCCAT | 59.536 | 37.500 | 8.47 | 0.00 | 35.14 | 3.41 |
1895 | 7007 | 3.826157 | AGAAAATTTTGCACGGATCTCCA | 59.174 | 39.130 | 8.47 | 0.00 | 35.14 | 3.86 |
1896 | 7008 | 4.440839 | AGAAAATTTTGCACGGATCTCC | 57.559 | 40.909 | 8.47 | 0.00 | 0.00 | 3.71 |
1897 | 7009 | 6.769608 | AAAAGAAAATTTTGCACGGATCTC | 57.230 | 33.333 | 8.47 | 0.00 | 0.00 | 2.75 |
1898 | 7010 | 8.655651 | TTAAAAAGAAAATTTTGCACGGATCT | 57.344 | 26.923 | 8.47 | 0.00 | 34.51 | 2.75 |
1899 | 7011 | 9.877137 | AATTAAAAAGAAAATTTTGCACGGATC | 57.123 | 25.926 | 8.47 | 0.00 | 34.51 | 3.36 |
1951 | 7063 | 8.421673 | ACTAAACAAAGTCTAAGTCAAGTGAC | 57.578 | 34.615 | 3.12 | 3.12 | 45.08 | 3.67 |
1952 | 7064 | 8.644318 | GACTAAACAAAGTCTAAGTCAAGTGA | 57.356 | 34.615 | 0.00 | 0.00 | 42.21 | 3.41 |
1964 | 7076 | 5.399892 | CACTCGACTGAGACTAAACAAAGTC | 59.600 | 44.000 | 0.00 | 0.00 | 45.57 | 3.01 |
1965 | 7077 | 5.067413 | TCACTCGACTGAGACTAAACAAAGT | 59.933 | 40.000 | 0.00 | 0.00 | 45.57 | 2.66 |
1966 | 7078 | 5.520632 | TCACTCGACTGAGACTAAACAAAG | 58.479 | 41.667 | 0.00 | 0.00 | 45.57 | 2.77 |
1967 | 7079 | 5.298527 | TCTCACTCGACTGAGACTAAACAAA | 59.701 | 40.000 | 17.60 | 0.00 | 45.57 | 2.83 |
1968 | 7080 | 4.820173 | TCTCACTCGACTGAGACTAAACAA | 59.180 | 41.667 | 17.60 | 0.00 | 45.57 | 2.83 |
1969 | 7081 | 4.386711 | TCTCACTCGACTGAGACTAAACA | 58.613 | 43.478 | 17.60 | 0.00 | 45.57 | 2.83 |
1976 | 7088 | 2.678479 | GCTAGGTCTCACTCGACTGAGA | 60.678 | 54.545 | 17.60 | 17.60 | 45.57 | 3.27 |
1978 | 7090 | 1.679336 | GGCTAGGTCTCACTCGACTGA | 60.679 | 57.143 | 0.00 | 0.00 | 34.38 | 3.41 |
1979 | 7091 | 0.736053 | GGCTAGGTCTCACTCGACTG | 59.264 | 60.000 | 0.00 | 0.00 | 34.38 | 3.51 |
1980 | 7092 | 0.328592 | TGGCTAGGTCTCACTCGACT | 59.671 | 55.000 | 0.00 | 0.00 | 34.38 | 4.18 |
1981 | 7093 | 0.452585 | GTGGCTAGGTCTCACTCGAC | 59.547 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1982 | 7094 | 0.037734 | TGTGGCTAGGTCTCACTCGA | 59.962 | 55.000 | 0.00 | 0.00 | 33.04 | 4.04 |
1983 | 7095 | 0.171455 | GTGTGGCTAGGTCTCACTCG | 59.829 | 60.000 | 0.00 | 0.00 | 33.04 | 4.18 |
1984 | 7096 | 0.533032 | GGTGTGGCTAGGTCTCACTC | 59.467 | 60.000 | 4.75 | 0.00 | 33.04 | 3.51 |
1985 | 7097 | 0.905337 | GGGTGTGGCTAGGTCTCACT | 60.905 | 60.000 | 4.75 | 0.00 | 33.04 | 3.41 |
1986 | 7098 | 0.905337 | AGGGTGTGGCTAGGTCTCAC | 60.905 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1987 | 7099 | 0.708209 | TAGGGTGTGGCTAGGTCTCA | 59.292 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1988 | 7100 | 1.861982 | TTAGGGTGTGGCTAGGTCTC | 58.138 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1989 | 7101 | 2.337359 | TTTAGGGTGTGGCTAGGTCT | 57.663 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1990 | 7102 | 3.008704 | TCTTTTTAGGGTGTGGCTAGGTC | 59.991 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
1991 | 7103 | 2.983898 | TCTTTTTAGGGTGTGGCTAGGT | 59.016 | 45.455 | 0.00 | 0.00 | 0.00 | 3.08 |
1992 | 7104 | 3.713826 | TCTTTTTAGGGTGTGGCTAGG | 57.286 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
1993 | 7105 | 6.650120 | TCTATTCTTTTTAGGGTGTGGCTAG | 58.350 | 40.000 | 0.00 | 0.00 | 0.00 | 3.42 |
1994 | 7106 | 6.630203 | TCTATTCTTTTTAGGGTGTGGCTA | 57.370 | 37.500 | 0.00 | 0.00 | 0.00 | 3.93 |
1995 | 7107 | 5.514500 | TCTATTCTTTTTAGGGTGTGGCT | 57.486 | 39.130 | 0.00 | 0.00 | 0.00 | 4.75 |
1996 | 7108 | 5.944007 | TCTTCTATTCTTTTTAGGGTGTGGC | 59.056 | 40.000 | 0.00 | 0.00 | 0.00 | 5.01 |
1997 | 7109 | 6.940298 | TGTCTTCTATTCTTTTTAGGGTGTGG | 59.060 | 38.462 | 0.00 | 0.00 | 0.00 | 4.17 |
1998 | 7110 | 7.979444 | TGTCTTCTATTCTTTTTAGGGTGTG | 57.021 | 36.000 | 0.00 | 0.00 | 0.00 | 3.82 |
1999 | 7111 | 8.990163 | TTTGTCTTCTATTCTTTTTAGGGTGT | 57.010 | 30.769 | 0.00 | 0.00 | 0.00 | 4.16 |
2054 | 7166 | 1.980844 | CATGCACACAAACATCTTCGC | 59.019 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
2056 | 7168 | 4.801891 | ACATCATGCACACAAACATCTTC | 58.198 | 39.130 | 0.00 | 0.00 | 0.00 | 2.87 |
2071 | 7183 | 6.361481 | CGCTAAAAATTGGCATAGACATCATG | 59.639 | 38.462 | 0.00 | 0.00 | 36.91 | 3.07 |
2073 | 7185 | 5.356751 | ACGCTAAAAATTGGCATAGACATCA | 59.643 | 36.000 | 0.00 | 0.00 | 36.91 | 3.07 |
2080 | 7192 | 8.029522 | TGTTTAATCACGCTAAAAATTGGCATA | 58.970 | 29.630 | 0.00 | 0.00 | 36.91 | 3.14 |
2081 | 7193 | 6.870965 | TGTTTAATCACGCTAAAAATTGGCAT | 59.129 | 30.769 | 0.00 | 0.00 | 36.91 | 4.40 |
2084 | 7196 | 8.687824 | AGATGTTTAATCACGCTAAAAATTGG | 57.312 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
2118 | 7230 | 6.405538 | ACCTCAAATTTGTCTTTTTGCTGAA | 58.594 | 32.000 | 17.47 | 0.00 | 33.77 | 3.02 |
2128 | 7241 | 7.847096 | ACTTTTACCAAACCTCAAATTTGTCT | 58.153 | 30.769 | 17.47 | 0.00 | 35.65 | 3.41 |
2139 | 7252 | 9.990360 | CATAACCAATAAACTTTTACCAAACCT | 57.010 | 29.630 | 0.00 | 0.00 | 0.00 | 3.50 |
2140 | 7253 | 8.714179 | GCATAACCAATAAACTTTTACCAAACC | 58.286 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2141 | 7254 | 9.262358 | TGCATAACCAATAAACTTTTACCAAAC | 57.738 | 29.630 | 0.00 | 0.00 | 0.00 | 2.93 |
2142 | 7255 | 9.262358 | GTGCATAACCAATAAACTTTTACCAAA | 57.738 | 29.630 | 0.00 | 0.00 | 0.00 | 3.28 |
2144 | 7257 | 8.085296 | CAGTGCATAACCAATAAACTTTTACCA | 58.915 | 33.333 | 0.00 | 0.00 | 0.00 | 3.25 |
2145 | 7258 | 8.085909 | ACAGTGCATAACCAATAAACTTTTACC | 58.914 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
2146 | 7259 | 9.471084 | AACAGTGCATAACCAATAAACTTTTAC | 57.529 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
2152 | 7266 | 6.364976 | GTCCAAACAGTGCATAACCAATAAAC | 59.635 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
2153 | 7267 | 6.451393 | GTCCAAACAGTGCATAACCAATAAA | 58.549 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2160 | 7274 | 1.199097 | CCGGTCCAAACAGTGCATAAC | 59.801 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
2189 | 7303 | 6.427441 | TGGAGATCTTAGTAGCTCTCAGAAA | 58.573 | 40.000 | 0.00 | 0.00 | 42.71 | 2.52 |
2194 | 7308 | 6.270064 | GTGTTTGGAGATCTTAGTAGCTCTC | 58.730 | 44.000 | 0.00 | 0.00 | 41.05 | 3.20 |
2222 | 7336 | 2.198827 | TGTGATCCGTGCCAATTTCT | 57.801 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2223 | 7337 | 2.801063 | CATGTGATCCGTGCCAATTTC | 58.199 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
2237 | 7351 | 4.398988 | GGGAATATGTTTGAGTGCATGTGA | 59.601 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
2322 | 7438 | 2.292845 | CTGCACTCGAGCTCATCTGATA | 59.707 | 50.000 | 13.61 | 0.00 | 34.99 | 2.15 |
2325 | 7441 | 0.455005 | TCTGCACTCGAGCTCATCTG | 59.545 | 55.000 | 13.61 | 2.95 | 34.99 | 2.90 |
2327 | 7443 | 2.222007 | ATTCTGCACTCGAGCTCATC | 57.778 | 50.000 | 13.61 | 0.00 | 34.99 | 2.92 |
2332 | 7448 | 0.723981 | GTCCAATTCTGCACTCGAGC | 59.276 | 55.000 | 13.61 | 0.00 | 0.00 | 5.03 |
2398 | 7517 | 6.565247 | CGGAACTGTCAGTAATGTTTGTAACC | 60.565 | 42.308 | 5.77 | 0.00 | 0.00 | 2.85 |
2402 | 7521 | 4.272504 | CACGGAACTGTCAGTAATGTTTGT | 59.727 | 41.667 | 5.77 | 0.00 | 30.33 | 2.83 |
2414 | 7533 | 4.802563 | GCCTATAGTTTACACGGAACTGTC | 59.197 | 45.833 | 0.00 | 0.00 | 37.84 | 3.51 |
2415 | 7534 | 4.676196 | CGCCTATAGTTTACACGGAACTGT | 60.676 | 45.833 | 0.00 | 0.00 | 37.84 | 3.55 |
2419 | 7538 | 3.443329 | TGTCGCCTATAGTTTACACGGAA | 59.557 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
2444 | 7709 | 8.160106 | TCCCAAAAATTAAAATGCCACTACAAT | 58.840 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
2449 | 7714 | 6.654582 | GTGATCCCAAAAATTAAAATGCCACT | 59.345 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
2576 | 7849 | 5.921408 | GGTGATCTACTGATCCGATTGTAAC | 59.079 | 44.000 | 0.00 | 0.00 | 46.34 | 2.50 |
2585 | 7858 | 3.189702 | GTCGCTAGGTGATCTACTGATCC | 59.810 | 52.174 | 0.00 | 0.00 | 46.34 | 3.36 |
2586 | 7859 | 3.815962 | TGTCGCTAGGTGATCTACTGATC | 59.184 | 47.826 | 0.00 | 0.00 | 46.89 | 2.92 |
2587 | 7860 | 3.821748 | TGTCGCTAGGTGATCTACTGAT | 58.178 | 45.455 | 0.00 | 0.00 | 35.26 | 2.90 |
2613 | 7886 | 3.493699 | CCTTTGACTCACTCCGGTGTTTA | 60.494 | 47.826 | 6.39 | 0.00 | 43.41 | 2.01 |
2621 | 7894 | 2.079925 | GATGTGCCTTTGACTCACTCC | 58.920 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2625 | 7898 | 1.795768 | GACGATGTGCCTTTGACTCA | 58.204 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2628 | 7901 | 0.438830 | GACGACGATGTGCCTTTGAC | 59.561 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2631 | 7904 | 1.337728 | TGATGACGACGATGTGCCTTT | 60.338 | 47.619 | 0.00 | 0.00 | 0.00 | 3.11 |
2638 | 7911 | 1.611006 | AGAGGGATGATGACGACGATG | 59.389 | 52.381 | 0.00 | 0.00 | 0.00 | 3.84 |
2639 | 7912 | 1.988293 | AGAGGGATGATGACGACGAT | 58.012 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
2640 | 7913 | 1.763968 | AAGAGGGATGATGACGACGA | 58.236 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2645 | 7918 | 2.555199 | CGGTGAAAGAGGGATGATGAC | 58.445 | 52.381 | 0.00 | 0.00 | 0.00 | 3.06 |
2651 | 7924 | 1.196012 | GACTCCGGTGAAAGAGGGAT | 58.804 | 55.000 | 11.17 | 0.00 | 34.27 | 3.85 |
2652 | 7925 | 1.248785 | CGACTCCGGTGAAAGAGGGA | 61.249 | 60.000 | 11.17 | 0.00 | 34.27 | 4.20 |
2665 | 7938 | 3.982576 | ACAACAACATTTTCCGACTCC | 57.017 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
2669 | 7942 | 7.442969 | ACTGTCTATTACAACAACATTTTCCGA | 59.557 | 33.333 | 0.00 | 0.00 | 37.74 | 4.55 |
2671 | 7944 | 8.564574 | TGACTGTCTATTACAACAACATTTTCC | 58.435 | 33.333 | 9.51 | 0.00 | 37.74 | 3.13 |
2702 | 7975 | 2.447408 | TGAGGCCTTTGCATGATGAT | 57.553 | 45.000 | 6.77 | 0.00 | 40.13 | 2.45 |
2705 | 7978 | 2.444388 | TCCTATGAGGCCTTTGCATGAT | 59.556 | 45.455 | 6.77 | 0.00 | 40.13 | 2.45 |
2744 | 8017 | 2.028876 | TCTCTTCATCGGCGGTGATTA | 58.971 | 47.619 | 25.04 | 13.80 | 0.00 | 1.75 |
2751 | 8024 | 0.248498 | TACGCTTCTCTTCATCGGCG | 60.248 | 55.000 | 0.00 | 0.00 | 46.47 | 6.46 |
2763 | 8036 | 7.381139 | TGGTTTGATTCTTTTGATTTACGCTTC | 59.619 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
2766 | 8039 | 6.640907 | ACTGGTTTGATTCTTTTGATTTACGC | 59.359 | 34.615 | 0.00 | 0.00 | 0.00 | 4.42 |
2775 | 8048 | 7.556275 | TCTTGTGTCTACTGGTTTGATTCTTTT | 59.444 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
2788 | 8061 | 2.095161 | GTCCTCGGTCTTGTGTCTACTG | 60.095 | 54.545 | 0.00 | 0.00 | 0.00 | 2.74 |
2789 | 8062 | 2.161030 | GTCCTCGGTCTTGTGTCTACT | 58.839 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.