Multiple sequence alignment - TraesCS5B01G481200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G481200 | chr5B | 100.000 | 5724 | 0 | 0 | 1 | 5724 | 653793170 | 653798893 | 0.000000e+00 | 10571 |
1 | TraesCS5B01G481200 | chr5B | 94.915 | 531 | 17 | 6 | 1817 | 2345 | 440100428 | 440100950 | 0.000000e+00 | 822 |
2 | TraesCS5B01G481200 | chr5D | 92.050 | 5006 | 215 | 80 | 483 | 5393 | 519421665 | 519426582 | 0.000000e+00 | 6870 |
3 | TraesCS5B01G481200 | chr5A | 94.056 | 1716 | 88 | 9 | 1838 | 3544 | 645998753 | 646000463 | 0.000000e+00 | 2591 |
4 | TraesCS5B01G481200 | chr5A | 88.112 | 1859 | 134 | 31 | 4 | 1813 | 645996948 | 645998768 | 0.000000e+00 | 2128 |
5 | TraesCS5B01G481200 | chr5A | 95.225 | 1110 | 40 | 9 | 4354 | 5461 | 646001350 | 646002448 | 0.000000e+00 | 1744 |
6 | TraesCS5B01G481200 | chr5A | 91.931 | 756 | 44 | 11 | 3613 | 4353 | 646000460 | 646001213 | 0.000000e+00 | 1042 |
7 | TraesCS5B01G481200 | chr4B | 94.504 | 837 | 32 | 7 | 1511 | 2345 | 226625305 | 226624481 | 0.000000e+00 | 1279 |
8 | TraesCS5B01G481200 | chr4B | 94.343 | 548 | 18 | 5 | 1800 | 2345 | 102094286 | 102093750 | 0.000000e+00 | 828 |
9 | TraesCS5B01G481200 | chr2B | 95.669 | 531 | 15 | 4 | 1817 | 2345 | 272173552 | 272173028 | 0.000000e+00 | 846 |
10 | TraesCS5B01G481200 | chr2B | 94.925 | 532 | 17 | 6 | 1817 | 2345 | 132705619 | 132706143 | 0.000000e+00 | 824 |
11 | TraesCS5B01G481200 | chr2B | 94.906 | 530 | 17 | 6 | 1818 | 2345 | 658913034 | 658912513 | 0.000000e+00 | 821 |
12 | TraesCS5B01G481200 | chr2B | 94.717 | 530 | 19 | 5 | 1818 | 2345 | 63556531 | 63556009 | 0.000000e+00 | 815 |
13 | TraesCS5B01G481200 | chr1B | 83.436 | 163 | 20 | 5 | 1210 | 1370 | 98745699 | 98745856 | 1.660000e-30 | 145 |
14 | TraesCS5B01G481200 | chr1B | 90.741 | 108 | 10 | 0 | 1263 | 1370 | 98803749 | 98803856 | 1.660000e-30 | 145 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G481200 | chr5B | 653793170 | 653798893 | 5723 | False | 10571.00 | 10571 | 100.000 | 1 | 5724 | 1 | chr5B.!!$F2 | 5723 |
1 | TraesCS5B01G481200 | chr5B | 440100428 | 440100950 | 522 | False | 822.00 | 822 | 94.915 | 1817 | 2345 | 1 | chr5B.!!$F1 | 528 |
2 | TraesCS5B01G481200 | chr5D | 519421665 | 519426582 | 4917 | False | 6870.00 | 6870 | 92.050 | 483 | 5393 | 1 | chr5D.!!$F1 | 4910 |
3 | TraesCS5B01G481200 | chr5A | 645996948 | 646002448 | 5500 | False | 1876.25 | 2591 | 92.331 | 4 | 5461 | 4 | chr5A.!!$F1 | 5457 |
4 | TraesCS5B01G481200 | chr4B | 226624481 | 226625305 | 824 | True | 1279.00 | 1279 | 94.504 | 1511 | 2345 | 1 | chr4B.!!$R2 | 834 |
5 | TraesCS5B01G481200 | chr4B | 102093750 | 102094286 | 536 | True | 828.00 | 828 | 94.343 | 1800 | 2345 | 1 | chr4B.!!$R1 | 545 |
6 | TraesCS5B01G481200 | chr2B | 272173028 | 272173552 | 524 | True | 846.00 | 846 | 95.669 | 1817 | 2345 | 1 | chr2B.!!$R2 | 528 |
7 | TraesCS5B01G481200 | chr2B | 132705619 | 132706143 | 524 | False | 824.00 | 824 | 94.925 | 1817 | 2345 | 1 | chr2B.!!$F1 | 528 |
8 | TraesCS5B01G481200 | chr2B | 658912513 | 658913034 | 521 | True | 821.00 | 821 | 94.906 | 1818 | 2345 | 1 | chr2B.!!$R3 | 527 |
9 | TraesCS5B01G481200 | chr2B | 63556009 | 63556531 | 522 | True | 815.00 | 815 | 94.717 | 1818 | 2345 | 1 | chr2B.!!$R1 | 527 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
692 | 698 | 0.037046 | CTCCCCCATTTTGTTGCTGC | 60.037 | 55.000 | 0.00 | 0.00 | 0.0 | 5.25 | F |
1276 | 1333 | 0.313987 | GGTTTTGTGCAGCCAGTACC | 59.686 | 55.000 | 0.00 | 0.00 | 31.0 | 3.34 | F |
1466 | 1523 | 0.475906 | GCAGCCATGGATAGGGAAGT | 59.524 | 55.000 | 18.40 | 0.00 | 0.0 | 3.01 | F |
2702 | 2763 | 1.601759 | CTCTGCACACAACCCTGGG | 60.602 | 63.158 | 12.28 | 12.28 | 0.0 | 4.45 | F |
3969 | 4067 | 1.068954 | GCTTGTTTTTCTGCCTCTCGG | 60.069 | 52.381 | 0.00 | 0.00 | 0.0 | 4.63 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2690 | 2751 | 0.106719 | CACTGAACCCAGGGTTGTGT | 60.107 | 55.000 | 30.03 | 22.0 | 46.95 | 3.72 | R |
2900 | 2961 | 3.812053 | GCATGCACCTTCTTGGAGTATAG | 59.188 | 47.826 | 14.21 | 0.0 | 39.71 | 1.31 | R |
3969 | 4067 | 2.165319 | ACGTAGGAGAAACACAAGGC | 57.835 | 50.000 | 0.00 | 0.0 | 0.00 | 4.35 | R |
4032 | 4131 | 0.457851 | CCTCGTAGCTTGTCCTCCTG | 59.542 | 60.000 | 0.00 | 0.0 | 0.00 | 3.86 | R |
5661 | 5910 | 0.034670 | GGCCAGAAGAAGTCCAGCAT | 60.035 | 55.000 | 0.00 | 0.0 | 0.00 | 3.79 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
52 | 53 | 8.776470 | CATATGCATGTCACTGTAATCATGTAA | 58.224 | 33.333 | 10.16 | 8.58 | 39.54 | 2.41 |
53 | 54 | 6.421377 | TGCATGTCACTGTAATCATGTAAC | 57.579 | 37.500 | 15.18 | 0.00 | 39.54 | 2.50 |
64 | 65 | 9.944376 | ACTGTAATCATGTAACTATGTCTTTGT | 57.056 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
86 | 87 | 5.221823 | TGTGTGTCATTCTTCCATAGGAACA | 60.222 | 40.000 | 0.00 | 0.00 | 36.71 | 3.18 |
144 | 146 | 6.652900 | ACATATGGTGGCAAAATAACCAAAAC | 59.347 | 34.615 | 7.80 | 0.00 | 46.59 | 2.43 |
219 | 221 | 9.758651 | AACAACACAATTTCCTATAAGAAAACC | 57.241 | 29.630 | 0.73 | 0.00 | 39.11 | 3.27 |
281 | 284 | 5.957771 | TGGTGCTTCTATCTTTACATCCT | 57.042 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
287 | 290 | 5.071115 | GCTTCTATCTTTACATCCTGGGAGT | 59.929 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
293 | 296 | 5.500234 | TCTTTACATCCTGGGAGTGATTTG | 58.500 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
294 | 297 | 4.927267 | TTACATCCTGGGAGTGATTTGT | 57.073 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
295 | 298 | 3.356529 | ACATCCTGGGAGTGATTTGTC | 57.643 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
296 | 299 | 2.644299 | ACATCCTGGGAGTGATTTGTCA | 59.356 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
297 | 300 | 3.074390 | ACATCCTGGGAGTGATTTGTCAA | 59.926 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
298 | 301 | 3.140325 | TCCTGGGAGTGATTTGTCAAC | 57.860 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
299 | 302 | 2.441375 | TCCTGGGAGTGATTTGTCAACA | 59.559 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
300 | 303 | 3.074390 | TCCTGGGAGTGATTTGTCAACAT | 59.926 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
301 | 304 | 3.192001 | CCTGGGAGTGATTTGTCAACATG | 59.808 | 47.826 | 0.00 | 0.00 | 0.00 | 3.21 |
303 | 306 | 2.094545 | GGGAGTGATTTGTCAACATGGC | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
304 | 307 | 2.557924 | GGAGTGATTTGTCAACATGGCA | 59.442 | 45.455 | 0.00 | 0.00 | 0.00 | 4.92 |
305 | 308 | 3.005684 | GGAGTGATTTGTCAACATGGCAA | 59.994 | 43.478 | 0.00 | 0.00 | 40.62 | 4.52 |
306 | 309 | 4.232221 | GAGTGATTTGTCAACATGGCAAG | 58.768 | 43.478 | 0.00 | 0.00 | 43.41 | 4.01 |
307 | 310 | 3.006110 | AGTGATTTGTCAACATGGCAAGG | 59.994 | 43.478 | 0.00 | 0.00 | 43.41 | 3.61 |
308 | 311 | 3.005684 | GTGATTTGTCAACATGGCAAGGA | 59.994 | 43.478 | 0.00 | 0.00 | 43.41 | 3.36 |
309 | 312 | 3.005684 | TGATTTGTCAACATGGCAAGGAC | 59.994 | 43.478 | 0.00 | 0.00 | 43.41 | 3.85 |
310 | 313 | 2.064434 | TTGTCAACATGGCAAGGACA | 57.936 | 45.000 | 9.00 | 9.00 | 37.00 | 4.02 |
311 | 314 | 2.291209 | TGTCAACATGGCAAGGACAT | 57.709 | 45.000 | 9.00 | 0.00 | 33.88 | 3.06 |
312 | 315 | 2.596346 | TGTCAACATGGCAAGGACATT | 58.404 | 42.857 | 9.00 | 0.00 | 33.88 | 2.71 |
313 | 316 | 2.964464 | TGTCAACATGGCAAGGACATTT | 59.036 | 40.909 | 9.00 | 0.00 | 33.88 | 2.32 |
314 | 317 | 3.387374 | TGTCAACATGGCAAGGACATTTT | 59.613 | 39.130 | 9.00 | 0.00 | 33.88 | 1.82 |
315 | 318 | 4.586421 | TGTCAACATGGCAAGGACATTTTA | 59.414 | 37.500 | 9.00 | 0.00 | 33.88 | 1.52 |
321 | 324 | 7.844493 | ACATGGCAAGGACATTTTATGATAT | 57.156 | 32.000 | 0.00 | 0.00 | 0.00 | 1.63 |
333 | 336 | 8.958119 | ACATTTTATGATATACGTGGAAGTGT | 57.042 | 30.769 | 0.00 | 0.00 | 0.00 | 3.55 |
350 | 353 | 1.108776 | TGTCTATACCACCCAGACGC | 58.891 | 55.000 | 0.00 | 0.00 | 41.29 | 5.19 |
360 | 363 | 4.056125 | CCAGACGCTCCGCAGACA | 62.056 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
364 | 367 | 0.737715 | AGACGCTCCGCAGACATTTC | 60.738 | 55.000 | 0.00 | 0.00 | 0.00 | 2.17 |
403 | 406 | 9.406828 | GATTTCTGAATAAACCACAAAACTACC | 57.593 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
410 | 413 | 1.232119 | CCACAAAACTACCGGTGTCC | 58.768 | 55.000 | 19.93 | 0.00 | 0.00 | 4.02 |
419 | 422 | 4.354893 | ACTACCGGTGTCCATTAAAACA | 57.645 | 40.909 | 19.93 | 0.00 | 0.00 | 2.83 |
449 | 452 | 9.554724 | TTGTTGATTTGAAATATAACGAAGAGC | 57.445 | 29.630 | 10.78 | 0.00 | 0.00 | 4.09 |
452 | 455 | 6.262273 | TGATTTGAAATATAACGAAGAGCCCC | 59.738 | 38.462 | 0.00 | 0.00 | 0.00 | 5.80 |
459 | 462 | 2.358322 | AACGAAGAGCCCCTTTTCAA | 57.642 | 45.000 | 0.00 | 0.00 | 34.68 | 2.69 |
465 | 468 | 3.372440 | AGAGCCCCTTTTCAATGGTAG | 57.628 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
470 | 473 | 4.017499 | AGCCCCTTTTCAATGGTAGTATGT | 60.017 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
517 | 520 | 2.217847 | ACATCGACACGACGAAAACAAG | 59.782 | 45.455 | 0.00 | 0.00 | 45.16 | 3.16 |
518 | 521 | 0.573521 | TCGACACGACGAAAACAAGC | 59.426 | 50.000 | 0.00 | 0.00 | 39.34 | 4.01 |
586 | 589 | 6.137415 | CGAAAGAATAAAACGGCTTACACAA | 58.863 | 36.000 | 0.00 | 0.00 | 0.00 | 3.33 |
685 | 691 | 3.519107 | ACCTATTTTGCTCCCCCATTTTG | 59.481 | 43.478 | 0.00 | 0.00 | 0.00 | 2.44 |
692 | 698 | 0.037046 | CTCCCCCATTTTGTTGCTGC | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
774 | 780 | 4.143333 | GCAACCTAGCGGGCGAGA | 62.143 | 66.667 | 2.17 | 0.00 | 39.10 | 4.04 |
775 | 781 | 2.105128 | CAACCTAGCGGGCGAGAG | 59.895 | 66.667 | 2.17 | 0.00 | 39.10 | 3.20 |
776 | 782 | 2.044252 | AACCTAGCGGGCGAGAGA | 60.044 | 61.111 | 2.17 | 0.00 | 39.10 | 3.10 |
777 | 783 | 2.122167 | AACCTAGCGGGCGAGAGAG | 61.122 | 63.158 | 2.17 | 0.00 | 39.10 | 3.20 |
897 | 922 | 1.219393 | GCCTTTCCACCTCTCCTCG | 59.781 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
1047 | 1096 | 0.547712 | TCTCCCCTTCCAGGAACCTG | 60.548 | 60.000 | 13.32 | 13.32 | 37.67 | 4.00 |
1105 | 1154 | 4.193334 | GGCGGCGCCTGGATTTTC | 62.193 | 66.667 | 41.44 | 13.65 | 46.69 | 2.29 |
1111 | 1160 | 1.512694 | CGCCTGGATTTTCCTTGGC | 59.487 | 57.895 | 16.01 | 16.01 | 45.96 | 4.52 |
1123 | 1172 | 0.675633 | TCCTTGGCTTCTTTGCTTGC | 59.324 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
1250 | 1307 | 2.429478 | TGGTGATGTGATTGCTCTGTG | 58.571 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
1276 | 1333 | 0.313987 | GGTTTTGTGCAGCCAGTACC | 59.686 | 55.000 | 0.00 | 0.00 | 31.00 | 3.34 |
1423 | 1480 | 4.142513 | GGCTGATGTGATTTTCCTCTGTTC | 60.143 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
1466 | 1523 | 0.475906 | GCAGCCATGGATAGGGAAGT | 59.524 | 55.000 | 18.40 | 0.00 | 0.00 | 3.01 |
1467 | 1524 | 1.699634 | GCAGCCATGGATAGGGAAGTA | 59.300 | 52.381 | 18.40 | 0.00 | 0.00 | 2.24 |
1468 | 1525 | 2.551071 | GCAGCCATGGATAGGGAAGTAC | 60.551 | 54.545 | 18.40 | 0.00 | 0.00 | 2.73 |
1469 | 1526 | 2.705658 | CAGCCATGGATAGGGAAGTACA | 59.294 | 50.000 | 18.40 | 0.00 | 0.00 | 2.90 |
1480 | 1537 | 3.384168 | AGGGAAGTACATACATGGCTGA | 58.616 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
1594 | 1651 | 6.255215 | ACACTCTGTTTTCGTTTTGTACATG | 58.745 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
1669 | 1727 | 5.050499 | CGATAGTGTTGATCAATCCTTCTGC | 60.050 | 44.000 | 12.12 | 0.00 | 0.00 | 4.26 |
1728 | 1786 | 4.908601 | TCTTGACTGACATATGGTGGTT | 57.091 | 40.909 | 7.80 | 0.00 | 0.00 | 3.67 |
1940 | 1999 | 9.440773 | AAATGCTGTATATGAACATCGACATAT | 57.559 | 29.630 | 10.16 | 10.16 | 40.96 | 1.78 |
1941 | 2000 | 7.816945 | TGCTGTATATGAACATCGACATATG | 57.183 | 36.000 | 13.65 | 0.00 | 39.20 | 1.78 |
1988 | 2047 | 5.491070 | TGACATTATCAACCAGAGAGTTGG | 58.509 | 41.667 | 4.71 | 0.00 | 45.81 | 3.77 |
2140 | 2199 | 0.475906 | AGGGCATGCTTAGACCATCC | 59.524 | 55.000 | 18.92 | 6.69 | 36.27 | 3.51 |
2224 | 2285 | 5.608437 | TCTCACATATTAGCCTGAGGGATTT | 59.392 | 40.000 | 0.00 | 0.00 | 32.52 | 2.17 |
2246 | 2307 | 6.902771 | TTACTATCTTCAGTGAGGCTATCC | 57.097 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
2278 | 2339 | 6.969828 | TTTGTTTAAATGGTGGTGTTTGAC | 57.030 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2379 | 2440 | 8.886719 | CCATCAGCATGTTGTATGTATATTAGG | 58.113 | 37.037 | 9.54 | 0.00 | 34.05 | 2.69 |
2380 | 2441 | 7.905604 | TCAGCATGTTGTATGTATATTAGGC | 57.094 | 36.000 | 9.54 | 0.00 | 37.40 | 3.93 |
2440 | 2501 | 5.514274 | TTGAGAAAGGAATGGTTTGTGTC | 57.486 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
2487 | 2548 | 3.815401 | CGAATATGTTGGATCTGGTTCCC | 59.185 | 47.826 | 0.00 | 0.00 | 34.67 | 3.97 |
2633 | 2694 | 9.425248 | TCAATAGCCTATCCATTTCTTTTGATT | 57.575 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2690 | 2751 | 1.891919 | GCGGGTGTCAAACTCTGCA | 60.892 | 57.895 | 0.00 | 0.00 | 33.76 | 4.41 |
2702 | 2763 | 1.601759 | CTCTGCACACAACCCTGGG | 60.602 | 63.158 | 12.28 | 12.28 | 0.00 | 4.45 |
2950 | 3011 | 6.772716 | CACTGTGGGAGTATTAGCCATTATTT | 59.227 | 38.462 | 0.00 | 0.00 | 31.73 | 1.40 |
3278 | 3346 | 4.111577 | AGGTCCCAGTTGATTCTTATCCA | 58.888 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
3359 | 3427 | 5.067674 | CCATTTTCGATCCCTTTGCTGATAA | 59.932 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3361 | 3429 | 5.818136 | TTTCGATCCCTTTGCTGATAAAG | 57.182 | 39.130 | 0.00 | 0.00 | 37.40 | 1.85 |
3490 | 3559 | 4.604156 | GAAAGGGTTCCATCAAAGATCCT | 58.396 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
3531 | 3600 | 2.173519 | CAATGTTTGATCTGCACCCCT | 58.826 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
3533 | 3602 | 3.737559 | ATGTTTGATCTGCACCCCTTA | 57.262 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
3535 | 3604 | 3.420893 | TGTTTGATCTGCACCCCTTAAG | 58.579 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
3536 | 3605 | 3.181434 | TGTTTGATCTGCACCCCTTAAGT | 60.181 | 43.478 | 0.97 | 0.00 | 0.00 | 2.24 |
3566 | 3637 | 9.424319 | CTTACTAGTGCTTCTTCAGTTATTTGA | 57.576 | 33.333 | 5.39 | 0.00 | 0.00 | 2.69 |
3578 | 3649 | 9.816354 | TCTTCAGTTATTTGATCATCATTACGA | 57.184 | 29.630 | 0.00 | 0.00 | 0.00 | 3.43 |
3581 | 3652 | 8.817100 | TCAGTTATTTGATCATCATTACGACAC | 58.183 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
3582 | 3653 | 8.603181 | CAGTTATTTGATCATCATTACGACACA | 58.397 | 33.333 | 0.00 | 0.00 | 0.00 | 3.72 |
3594 | 3668 | 9.191995 | CATCATTACGACACATAGTTATAGCAA | 57.808 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
3847 | 3945 | 9.146984 | TCATGATAACTTTACTTTTACACCGAG | 57.853 | 33.333 | 0.00 | 0.00 | 0.00 | 4.63 |
3882 | 3980 | 5.086104 | TCTATTCTGTCCAGTTTACCTGC | 57.914 | 43.478 | 0.00 | 0.00 | 40.06 | 4.85 |
3954 | 4052 | 3.832527 | ACCTGTAGTTTCCATTGCTTGT | 58.167 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
3968 | 4066 | 1.603802 | TGCTTGTTTTTCTGCCTCTCG | 59.396 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
3969 | 4067 | 1.068954 | GCTTGTTTTTCTGCCTCTCGG | 60.069 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
3982 | 4080 | 1.433534 | CTCTCGGCCTTGTGTTTCTC | 58.566 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
3997 | 4095 | 4.621886 | GTGTTTCTCCTACGTTGCTAAGAG | 59.378 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
4012 | 4110 | 8.653338 | CGTTGCTAAGAGCTTAAGTTTTACATA | 58.347 | 33.333 | 4.02 | 0.00 | 42.97 | 2.29 |
4076 | 4175 | 1.608542 | CCAGGCTATGAGCATCTGAGC | 60.609 | 57.143 | 0.21 | 0.00 | 44.75 | 4.26 |
4160 | 4259 | 5.426504 | AGACATGCACAGGAAATTCTAGAG | 58.573 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
4237 | 4343 | 5.819991 | TCTGGAGAAAGCCAATGAAATACT | 58.180 | 37.500 | 0.00 | 0.00 | 37.52 | 2.12 |
4330 | 4438 | 7.250569 | AGGAATCACGTATAAAATGTTGCTTG | 58.749 | 34.615 | 0.00 | 0.00 | 0.00 | 4.01 |
4393 | 4637 | 9.930693 | GGATTATTACCGTTATTGATCTCTCTT | 57.069 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
4509 | 4753 | 2.555325 | CTGCTTGCTTGTCCAAGAATGA | 59.445 | 45.455 | 11.12 | 0.00 | 43.79 | 2.57 |
4510 | 4754 | 3.159472 | TGCTTGCTTGTCCAAGAATGAT | 58.841 | 40.909 | 11.12 | 0.00 | 43.79 | 2.45 |
4690 | 4934 | 1.648467 | GCGTCTCCCCATTCAGCAAC | 61.648 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
4899 | 5143 | 2.447630 | TCCTGCGGACAAGGAGAAA | 58.552 | 52.632 | 0.00 | 0.00 | 0.00 | 2.52 |
4911 | 5155 | 1.072505 | GGAGAAACCGCTGGGACAA | 59.927 | 57.895 | 0.00 | 0.00 | 38.70 | 3.18 |
4924 | 5168 | 3.197983 | GCTGGGACAATGGAAGTAGTAGT | 59.802 | 47.826 | 0.00 | 0.00 | 38.70 | 2.73 |
4925 | 5169 | 4.759782 | CTGGGACAATGGAAGTAGTAGTG | 58.240 | 47.826 | 0.00 | 0.00 | 38.70 | 2.74 |
4934 | 5178 | 1.481363 | GAAGTAGTAGTGGTCCTGGGC | 59.519 | 57.143 | 0.00 | 0.00 | 0.00 | 5.36 |
4936 | 5180 | 1.002533 | TAGTAGTGGTCCTGGGCCC | 59.997 | 63.158 | 17.59 | 17.59 | 0.00 | 5.80 |
5040 | 5285 | 3.070018 | GTGCTATGATGGTAGGTGATGC | 58.930 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
5042 | 5287 | 2.932622 | GCTATGATGGTAGGTGATGCCG | 60.933 | 54.545 | 0.00 | 0.00 | 43.70 | 5.69 |
5092 | 5337 | 6.006449 | AGTATGTGAGCTTTCATGTTTTCCT | 58.994 | 36.000 | 12.70 | 0.00 | 0.00 | 3.36 |
5237 | 5483 | 2.663196 | GGTTCAGACCGTGGAGGG | 59.337 | 66.667 | 0.00 | 0.00 | 46.96 | 4.30 |
5244 | 5490 | 0.903454 | AGACCGTGGAGGGTTCGAAT | 60.903 | 55.000 | 0.00 | 0.00 | 46.96 | 3.34 |
5316 | 5565 | 9.959749 | TCTTTGTGGTTTATATTGTTGAACTTC | 57.040 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
5317 | 5566 | 9.743057 | CTTTGTGGTTTATATTGTTGAACTTCA | 57.257 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
5344 | 5593 | 4.337555 | TGAATTTGTGGCAATTTTGGGTTG | 59.662 | 37.500 | 0.00 | 0.00 | 0.00 | 3.77 |
5361 | 5610 | 1.522258 | GTTGAGGCATGTTTGTTTGCG | 59.478 | 47.619 | 0.00 | 0.00 | 39.78 | 4.85 |
5374 | 5623 | 0.521291 | GTTTGCGTCTGCTTGGCATA | 59.479 | 50.000 | 0.00 | 0.00 | 43.34 | 3.14 |
5377 | 5626 | 0.734309 | TGCGTCTGCTTGGCATAATG | 59.266 | 50.000 | 0.00 | 0.00 | 43.34 | 1.90 |
5387 | 5636 | 1.927487 | TGGCATAATGGATGGGATGC | 58.073 | 50.000 | 0.00 | 0.00 | 43.19 | 3.91 |
5396 | 5645 | 2.833582 | ATGGGATGCTGCTGCTGC | 60.834 | 61.111 | 22.51 | 22.51 | 40.48 | 5.25 |
5397 | 5646 | 3.360423 | ATGGGATGCTGCTGCTGCT | 62.360 | 57.895 | 27.67 | 15.76 | 40.48 | 4.24 |
5398 | 5647 | 3.518998 | GGGATGCTGCTGCTGCTG | 61.519 | 66.667 | 27.67 | 16.73 | 40.48 | 4.41 |
5438 | 5687 | 3.378959 | CGTTTACCGTGGTAATTCTGC | 57.621 | 47.619 | 12.04 | 1.47 | 39.87 | 4.26 |
5448 | 5697 | 6.600032 | ACCGTGGTAATTCTGCATTATTGTTA | 59.400 | 34.615 | 0.00 | 0.00 | 29.70 | 2.41 |
5449 | 5698 | 7.284489 | ACCGTGGTAATTCTGCATTATTGTTAT | 59.716 | 33.333 | 0.00 | 0.00 | 29.70 | 1.89 |
5450 | 5699 | 8.134895 | CCGTGGTAATTCTGCATTATTGTTATT | 58.865 | 33.333 | 0.00 | 0.00 | 29.70 | 1.40 |
5451 | 5700 | 9.515020 | CGTGGTAATTCTGCATTATTGTTATTT | 57.485 | 29.630 | 0.00 | 0.00 | 29.70 | 1.40 |
5476 | 5725 | 8.208718 | TGTAGATACAAATGTGGTAATTCTGC | 57.791 | 34.615 | 0.00 | 0.00 | 32.40 | 4.26 |
5477 | 5726 | 7.826744 | TGTAGATACAAATGTGGTAATTCTGCA | 59.173 | 33.333 | 0.00 | 0.00 | 32.40 | 4.41 |
5478 | 5727 | 7.088589 | AGATACAAATGTGGTAATTCTGCAC | 57.911 | 36.000 | 0.00 | 0.00 | 0.00 | 4.57 |
5479 | 5728 | 6.886459 | AGATACAAATGTGGTAATTCTGCACT | 59.114 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
5480 | 5729 | 8.046708 | AGATACAAATGTGGTAATTCTGCACTA | 58.953 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
5481 | 5730 | 8.752005 | ATACAAATGTGGTAATTCTGCACTAT | 57.248 | 30.769 | 0.00 | 0.00 | 0.00 | 2.12 |
5482 | 5731 | 7.466746 | ACAAATGTGGTAATTCTGCACTATT | 57.533 | 32.000 | 0.00 | 0.00 | 0.00 | 1.73 |
5483 | 5732 | 7.315142 | ACAAATGTGGTAATTCTGCACTATTG | 58.685 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
5484 | 5733 | 7.039784 | ACAAATGTGGTAATTCTGCACTATTGT | 60.040 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
5485 | 5734 | 7.466746 | AATGTGGTAATTCTGCACTATTGTT | 57.533 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
5493 | 5742 | 5.843673 | TTCTGCACTATTGTTGTTTGGAA | 57.156 | 34.783 | 0.00 | 0.00 | 0.00 | 3.53 |
5500 | 5749 | 7.023575 | GCACTATTGTTGTTTGGAAGATACAG | 58.976 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
5501 | 5750 | 7.094805 | GCACTATTGTTGTTTGGAAGATACAGA | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
5502 | 5751 | 8.950210 | CACTATTGTTGTTTGGAAGATACAGAT | 58.050 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
5503 | 5752 | 8.950210 | ACTATTGTTGTTTGGAAGATACAGATG | 58.050 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
5504 | 5753 | 5.627499 | TGTTGTTTGGAAGATACAGATGC | 57.373 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
5505 | 5754 | 5.069318 | TGTTGTTTGGAAGATACAGATGCA | 58.931 | 37.500 | 0.00 | 0.00 | 0.00 | 3.96 |
5506 | 5755 | 5.711506 | TGTTGTTTGGAAGATACAGATGCAT | 59.288 | 36.000 | 0.00 | 0.00 | 0.00 | 3.96 |
5507 | 5756 | 6.883756 | TGTTGTTTGGAAGATACAGATGCATA | 59.116 | 34.615 | 0.00 | 0.00 | 0.00 | 3.14 |
5508 | 5757 | 7.557358 | TGTTGTTTGGAAGATACAGATGCATAT | 59.443 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
5509 | 5758 | 9.056005 | GTTGTTTGGAAGATACAGATGCATATA | 57.944 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
5510 | 5759 | 9.797642 | TTGTTTGGAAGATACAGATGCATATAT | 57.202 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
5511 | 5760 | 9.223099 | TGTTTGGAAGATACAGATGCATATATG | 57.777 | 33.333 | 8.45 | 8.45 | 0.00 | 1.78 |
5512 | 5761 | 9.224267 | GTTTGGAAGATACAGATGCATATATGT | 57.776 | 33.333 | 14.14 | 14.10 | 41.34 | 2.29 |
5513 | 5762 | 8.782339 | TTGGAAGATACAGATGCATATATGTG | 57.218 | 34.615 | 17.51 | 6.99 | 39.01 | 3.21 |
5514 | 5763 | 6.820152 | TGGAAGATACAGATGCATATATGTGC | 59.180 | 38.462 | 16.82 | 16.82 | 39.01 | 4.57 |
5533 | 5782 | 2.613691 | GCAGGAAAATGCATTCAGTGG | 58.386 | 47.619 | 13.38 | 4.32 | 45.77 | 4.00 |
5534 | 5783 | 2.231964 | GCAGGAAAATGCATTCAGTGGA | 59.768 | 45.455 | 13.38 | 0.00 | 45.77 | 4.02 |
5535 | 5784 | 3.306225 | GCAGGAAAATGCATTCAGTGGAA | 60.306 | 43.478 | 13.38 | 0.00 | 45.77 | 3.53 |
5536 | 5785 | 4.800249 | GCAGGAAAATGCATTCAGTGGAAA | 60.800 | 41.667 | 13.38 | 0.00 | 45.77 | 3.13 |
5537 | 5786 | 5.299148 | CAGGAAAATGCATTCAGTGGAAAA | 58.701 | 37.500 | 13.38 | 0.00 | 36.43 | 2.29 |
5538 | 5787 | 5.759273 | CAGGAAAATGCATTCAGTGGAAAAA | 59.241 | 36.000 | 13.38 | 0.00 | 36.43 | 1.94 |
5539 | 5788 | 6.428771 | CAGGAAAATGCATTCAGTGGAAAAAT | 59.571 | 34.615 | 13.38 | 0.00 | 36.43 | 1.82 |
5540 | 5789 | 7.603404 | CAGGAAAATGCATTCAGTGGAAAAATA | 59.397 | 33.333 | 13.38 | 0.00 | 36.43 | 1.40 |
5541 | 5790 | 8.323567 | AGGAAAATGCATTCAGTGGAAAAATAT | 58.676 | 29.630 | 13.38 | 0.00 | 36.43 | 1.28 |
5542 | 5791 | 8.606602 | GGAAAATGCATTCAGTGGAAAAATATC | 58.393 | 33.333 | 13.38 | 0.00 | 36.43 | 1.63 |
5543 | 5792 | 9.153721 | GAAAATGCATTCAGTGGAAAAATATCA | 57.846 | 29.630 | 13.38 | 0.00 | 36.43 | 2.15 |
5544 | 5793 | 8.712285 | AAATGCATTCAGTGGAAAAATATCAG | 57.288 | 30.769 | 13.38 | 0.00 | 36.43 | 2.90 |
5545 | 5794 | 5.653507 | TGCATTCAGTGGAAAAATATCAGC | 58.346 | 37.500 | 0.00 | 0.00 | 36.43 | 4.26 |
5546 | 5795 | 5.045872 | GCATTCAGTGGAAAAATATCAGCC | 58.954 | 41.667 | 0.00 | 0.00 | 36.43 | 4.85 |
5547 | 5796 | 5.163478 | GCATTCAGTGGAAAAATATCAGCCT | 60.163 | 40.000 | 0.00 | 0.00 | 36.43 | 4.58 |
5548 | 5797 | 6.039717 | GCATTCAGTGGAAAAATATCAGCCTA | 59.960 | 38.462 | 0.00 | 0.00 | 36.43 | 3.93 |
5549 | 5798 | 7.416664 | GCATTCAGTGGAAAAATATCAGCCTAA | 60.417 | 37.037 | 0.00 | 0.00 | 36.43 | 2.69 |
5550 | 5799 | 7.630242 | TTCAGTGGAAAAATATCAGCCTAAG | 57.370 | 36.000 | 0.00 | 0.00 | 0.00 | 2.18 |
5551 | 5800 | 6.957631 | TCAGTGGAAAAATATCAGCCTAAGA | 58.042 | 36.000 | 0.00 | 0.00 | 0.00 | 2.10 |
5552 | 5801 | 7.402054 | TCAGTGGAAAAATATCAGCCTAAGAA | 58.598 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
5553 | 5802 | 8.055181 | TCAGTGGAAAAATATCAGCCTAAGAAT | 58.945 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
5554 | 5803 | 8.689972 | CAGTGGAAAAATATCAGCCTAAGAATT | 58.310 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
5555 | 5804 | 9.259832 | AGTGGAAAAATATCAGCCTAAGAATTT | 57.740 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
5556 | 5805 | 9.875691 | GTGGAAAAATATCAGCCTAAGAATTTT | 57.124 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
5565 | 5814 | 8.767478 | ATCAGCCTAAGAATTTTCAAACATTG | 57.233 | 30.769 | 0.00 | 0.00 | 0.00 | 2.82 |
5566 | 5815 | 7.153985 | TCAGCCTAAGAATTTTCAAACATTGG | 58.846 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
5567 | 5816 | 7.015098 | TCAGCCTAAGAATTTTCAAACATTGGA | 59.985 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
5568 | 5817 | 7.116805 | CAGCCTAAGAATTTTCAAACATTGGAC | 59.883 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
5569 | 5818 | 7.015584 | AGCCTAAGAATTTTCAAACATTGGACT | 59.984 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
5570 | 5819 | 8.303876 | GCCTAAGAATTTTCAAACATTGGACTA | 58.696 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
5574 | 5823 | 9.883142 | AAGAATTTTCAAACATTGGACTAAACA | 57.117 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
5575 | 5824 | 9.883142 | AGAATTTTCAAACATTGGACTAAACAA | 57.117 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
5577 | 5826 | 9.883142 | AATTTTCAAACATTGGACTAAACAAGA | 57.117 | 25.926 | 0.00 | 0.00 | 0.00 | 3.02 |
5579 | 5828 | 9.528018 | TTTTCAAACATTGGACTAAACAAGATC | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 2.75 |
5580 | 5829 | 8.463930 | TTCAAACATTGGACTAAACAAGATCT | 57.536 | 30.769 | 0.00 | 0.00 | 0.00 | 2.75 |
5581 | 5830 | 9.567776 | TTCAAACATTGGACTAAACAAGATCTA | 57.432 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
5582 | 5831 | 9.219603 | TCAAACATTGGACTAAACAAGATCTAG | 57.780 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
5583 | 5832 | 7.617041 | AACATTGGACTAAACAAGATCTAGC | 57.383 | 36.000 | 0.00 | 0.00 | 0.00 | 3.42 |
5584 | 5833 | 6.951971 | ACATTGGACTAAACAAGATCTAGCT | 58.048 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
5585 | 5834 | 7.398024 | ACATTGGACTAAACAAGATCTAGCTT | 58.602 | 34.615 | 0.00 | 0.00 | 0.00 | 3.74 |
5586 | 5835 | 7.550906 | ACATTGGACTAAACAAGATCTAGCTTC | 59.449 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
5587 | 5836 | 5.651530 | TGGACTAAACAAGATCTAGCTTCG | 58.348 | 41.667 | 0.00 | 0.00 | 0.00 | 3.79 |
5588 | 5837 | 5.185249 | TGGACTAAACAAGATCTAGCTTCGT | 59.815 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5589 | 5838 | 6.376299 | TGGACTAAACAAGATCTAGCTTCGTA | 59.624 | 38.462 | 0.00 | 0.00 | 0.00 | 3.43 |
5590 | 5839 | 6.692249 | GGACTAAACAAGATCTAGCTTCGTAC | 59.308 | 42.308 | 0.00 | 0.00 | 0.00 | 3.67 |
5591 | 5840 | 7.393841 | ACTAAACAAGATCTAGCTTCGTACT | 57.606 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
5592 | 5841 | 7.828712 | ACTAAACAAGATCTAGCTTCGTACTT | 58.171 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
5593 | 5842 | 6.952935 | AAACAAGATCTAGCTTCGTACTTG | 57.047 | 37.500 | 0.00 | 14.23 | 39.02 | 3.16 |
5594 | 5843 | 4.425520 | ACAAGATCTAGCTTCGTACTTGC | 58.574 | 43.478 | 15.13 | 0.00 | 37.38 | 4.01 |
5595 | 5844 | 4.158764 | ACAAGATCTAGCTTCGTACTTGCT | 59.841 | 41.667 | 15.13 | 8.68 | 37.38 | 3.91 |
5596 | 5845 | 4.300189 | AGATCTAGCTTCGTACTTGCTG | 57.700 | 45.455 | 12.33 | 5.23 | 37.62 | 4.41 |
5597 | 5846 | 2.941453 | TCTAGCTTCGTACTTGCTGG | 57.059 | 50.000 | 12.33 | 10.16 | 37.62 | 4.85 |
5598 | 5847 | 2.443416 | TCTAGCTTCGTACTTGCTGGA | 58.557 | 47.619 | 11.45 | 11.45 | 40.92 | 3.86 |
5599 | 5848 | 2.423892 | TCTAGCTTCGTACTTGCTGGAG | 59.576 | 50.000 | 11.45 | 5.03 | 38.92 | 3.86 |
5600 | 5849 | 0.969894 | AGCTTCGTACTTGCTGGAGT | 59.030 | 50.000 | 3.85 | 0.00 | 35.54 | 3.85 |
5601 | 5850 | 1.071605 | GCTTCGTACTTGCTGGAGTG | 58.928 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5602 | 5851 | 1.714794 | CTTCGTACTTGCTGGAGTGG | 58.285 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
5603 | 5852 | 0.320421 | TTCGTACTTGCTGGAGTGGC | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
5604 | 5853 | 2.094659 | CGTACTTGCTGGAGTGGCG | 61.095 | 63.158 | 0.00 | 0.00 | 0.00 | 5.69 |
5605 | 5854 | 1.004918 | GTACTTGCTGGAGTGGCGT | 60.005 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
5606 | 5855 | 0.602905 | GTACTTGCTGGAGTGGCGTT | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 4.84 |
5607 | 5856 | 0.602638 | TACTTGCTGGAGTGGCGTTG | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 4.10 |
5608 | 5857 | 2.594303 | TTGCTGGAGTGGCGTTGG | 60.594 | 61.111 | 0.00 | 0.00 | 0.00 | 3.77 |
5619 | 5868 | 2.125952 | GCGTTGGCCAGCCATTTC | 60.126 | 61.111 | 13.10 | 5.66 | 46.64 | 2.17 |
5620 | 5869 | 2.573340 | CGTTGGCCAGCCATTTCC | 59.427 | 61.111 | 13.10 | 0.41 | 46.64 | 3.13 |
5621 | 5870 | 2.981302 | GTTGGCCAGCCATTTCCC | 59.019 | 61.111 | 13.10 | 0.00 | 46.64 | 3.97 |
5622 | 5871 | 2.284552 | TTGGCCAGCCATTTCCCC | 60.285 | 61.111 | 13.10 | 0.00 | 46.64 | 4.81 |
5623 | 5872 | 3.922116 | TTGGCCAGCCATTTCCCCC | 62.922 | 63.158 | 13.10 | 0.00 | 46.64 | 5.40 |
5624 | 5873 | 4.397010 | GGCCAGCCATTTCCCCCA | 62.397 | 66.667 | 3.12 | 0.00 | 35.81 | 4.96 |
5625 | 5874 | 2.761213 | GCCAGCCATTTCCCCCAG | 60.761 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
5626 | 5875 | 2.761213 | CCAGCCATTTCCCCCAGC | 60.761 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
5627 | 5876 | 2.361771 | CAGCCATTTCCCCCAGCT | 59.638 | 61.111 | 0.00 | 0.00 | 0.00 | 4.24 |
5628 | 5877 | 1.305549 | CAGCCATTTCCCCCAGCTT | 60.306 | 57.895 | 0.00 | 0.00 | 0.00 | 3.74 |
5629 | 5878 | 1.305549 | AGCCATTTCCCCCAGCTTG | 60.306 | 57.895 | 0.00 | 0.00 | 0.00 | 4.01 |
5630 | 5879 | 1.305213 | GCCATTTCCCCCAGCTTGA | 60.305 | 57.895 | 0.00 | 0.00 | 0.00 | 3.02 |
5631 | 5880 | 1.325476 | GCCATTTCCCCCAGCTTGAG | 61.325 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5632 | 5881 | 1.325476 | CCATTTCCCCCAGCTTGAGC | 61.325 | 60.000 | 0.00 | 0.00 | 42.49 | 4.26 |
5646 | 5895 | 3.569548 | GCTTGAGCTTTACTTTTCCTGC | 58.430 | 45.455 | 0.00 | 0.00 | 38.21 | 4.85 |
5647 | 5896 | 3.814945 | CTTGAGCTTTACTTTTCCTGCG | 58.185 | 45.455 | 0.00 | 0.00 | 0.00 | 5.18 |
5648 | 5897 | 3.120321 | TGAGCTTTACTTTTCCTGCGA | 57.880 | 42.857 | 0.00 | 0.00 | 0.00 | 5.10 |
5649 | 5898 | 2.806244 | TGAGCTTTACTTTTCCTGCGAC | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
5650 | 5899 | 2.152016 | AGCTTTACTTTTCCTGCGACC | 58.848 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
5651 | 5900 | 1.877443 | GCTTTACTTTTCCTGCGACCA | 59.123 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
5652 | 5901 | 2.488153 | GCTTTACTTTTCCTGCGACCAT | 59.512 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
5653 | 5902 | 3.670627 | GCTTTACTTTTCCTGCGACCATG | 60.671 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
5654 | 5903 | 3.410631 | TTACTTTTCCTGCGACCATGA | 57.589 | 42.857 | 0.00 | 0.00 | 0.00 | 3.07 |
5655 | 5904 | 2.270352 | ACTTTTCCTGCGACCATGAA | 57.730 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5656 | 5905 | 2.154462 | ACTTTTCCTGCGACCATGAAG | 58.846 | 47.619 | 0.00 | 0.00 | 29.32 | 3.02 |
5657 | 5906 | 1.470098 | CTTTTCCTGCGACCATGAAGG | 59.530 | 52.381 | 0.00 | 0.00 | 45.67 | 3.46 |
5668 | 5917 | 2.133281 | CCATGAAGGTGAATGCTGGA | 57.867 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5669 | 5918 | 1.747355 | CCATGAAGGTGAATGCTGGAC | 59.253 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
5670 | 5919 | 2.619849 | CCATGAAGGTGAATGCTGGACT | 60.620 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5671 | 5920 | 2.957402 | TGAAGGTGAATGCTGGACTT | 57.043 | 45.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5672 | 5921 | 2.783135 | TGAAGGTGAATGCTGGACTTC | 58.217 | 47.619 | 0.00 | 0.00 | 35.96 | 3.01 |
5673 | 5922 | 2.373169 | TGAAGGTGAATGCTGGACTTCT | 59.627 | 45.455 | 0.00 | 0.00 | 36.28 | 2.85 |
5674 | 5923 | 3.181440 | TGAAGGTGAATGCTGGACTTCTT | 60.181 | 43.478 | 0.00 | 0.00 | 36.28 | 2.52 |
5675 | 5924 | 3.064900 | AGGTGAATGCTGGACTTCTTC | 57.935 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
5676 | 5925 | 2.641815 | AGGTGAATGCTGGACTTCTTCT | 59.358 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
5677 | 5926 | 2.746362 | GGTGAATGCTGGACTTCTTCTG | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5678 | 5927 | 2.746362 | GTGAATGCTGGACTTCTTCTGG | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5679 | 5928 | 1.742268 | GAATGCTGGACTTCTTCTGGC | 59.258 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
5680 | 5929 | 0.034670 | ATGCTGGACTTCTTCTGGCC | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
5681 | 5930 | 1.377856 | GCTGGACTTCTTCTGGCCC | 60.378 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
5682 | 5931 | 1.301293 | CTGGACTTCTTCTGGCCCC | 59.699 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
5683 | 5932 | 1.463214 | TGGACTTCTTCTGGCCCCA | 60.463 | 57.895 | 0.00 | 0.00 | 0.00 | 4.96 |
5684 | 5933 | 1.301293 | GGACTTCTTCTGGCCCCAG | 59.699 | 63.158 | 8.03 | 8.03 | 44.86 | 4.45 |
5685 | 5934 | 1.492993 | GGACTTCTTCTGGCCCCAGT | 61.493 | 60.000 | 13.66 | 0.00 | 43.96 | 4.00 |
5686 | 5935 | 0.035915 | GACTTCTTCTGGCCCCAGTC | 60.036 | 60.000 | 13.66 | 0.00 | 43.96 | 3.51 |
5687 | 5936 | 0.768221 | ACTTCTTCTGGCCCCAGTCA | 60.768 | 55.000 | 13.66 | 2.16 | 43.96 | 3.41 |
5688 | 5937 | 0.322008 | CTTCTTCTGGCCCCAGTCAC | 60.322 | 60.000 | 13.66 | 0.00 | 43.96 | 3.67 |
5689 | 5938 | 1.779061 | TTCTTCTGGCCCCAGTCACC | 61.779 | 60.000 | 13.66 | 0.00 | 43.96 | 4.02 |
5690 | 5939 | 2.121963 | TTCTGGCCCCAGTCACCT | 60.122 | 61.111 | 13.66 | 0.00 | 43.96 | 4.00 |
5691 | 5940 | 2.190488 | CTTCTGGCCCCAGTCACCTC | 62.190 | 65.000 | 13.66 | 0.00 | 43.96 | 3.85 |
5692 | 5941 | 2.930019 | CTGGCCCCAGTCACCTCA | 60.930 | 66.667 | 0.00 | 0.00 | 39.10 | 3.86 |
5693 | 5942 | 2.449518 | TGGCCCCAGTCACCTCAA | 60.450 | 61.111 | 0.00 | 0.00 | 0.00 | 3.02 |
5694 | 5943 | 2.352805 | GGCCCCAGTCACCTCAAG | 59.647 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
5695 | 5944 | 2.224159 | GGCCCCAGTCACCTCAAGA | 61.224 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
5696 | 5945 | 1.566298 | GGCCCCAGTCACCTCAAGAT | 61.566 | 60.000 | 0.00 | 0.00 | 0.00 | 2.40 |
5697 | 5946 | 0.107459 | GCCCCAGTCACCTCAAGATC | 60.107 | 60.000 | 0.00 | 0.00 | 0.00 | 2.75 |
5698 | 5947 | 1.279496 | CCCCAGTCACCTCAAGATCA | 58.721 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
5699 | 5948 | 1.065854 | CCCCAGTCACCTCAAGATCAC | 60.066 | 57.143 | 0.00 | 0.00 | 0.00 | 3.06 |
5700 | 5949 | 1.625315 | CCCAGTCACCTCAAGATCACA | 59.375 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
5701 | 5950 | 2.238144 | CCCAGTCACCTCAAGATCACAT | 59.762 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
5702 | 5951 | 3.268330 | CCAGTCACCTCAAGATCACATG | 58.732 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
5703 | 5952 | 2.676839 | CAGTCACCTCAAGATCACATGC | 59.323 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
5704 | 5953 | 2.570752 | AGTCACCTCAAGATCACATGCT | 59.429 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
5705 | 5954 | 2.676839 | GTCACCTCAAGATCACATGCTG | 59.323 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
5706 | 5955 | 2.568509 | TCACCTCAAGATCACATGCTGA | 59.431 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
5707 | 5956 | 3.008266 | TCACCTCAAGATCACATGCTGAA | 59.992 | 43.478 | 0.00 | 0.00 | 30.60 | 3.02 |
5708 | 5957 | 3.945921 | CACCTCAAGATCACATGCTGAAT | 59.054 | 43.478 | 0.00 | 0.00 | 30.60 | 2.57 |
5709 | 5958 | 4.398358 | CACCTCAAGATCACATGCTGAATT | 59.602 | 41.667 | 0.00 | 0.00 | 30.60 | 2.17 |
5710 | 5959 | 4.639310 | ACCTCAAGATCACATGCTGAATTC | 59.361 | 41.667 | 0.00 | 0.00 | 30.60 | 2.17 |
5711 | 5960 | 4.036498 | CCTCAAGATCACATGCTGAATTCC | 59.964 | 45.833 | 2.27 | 0.00 | 30.60 | 3.01 |
5712 | 5961 | 3.949754 | TCAAGATCACATGCTGAATTCCC | 59.050 | 43.478 | 2.27 | 0.00 | 30.60 | 3.97 |
5713 | 5962 | 2.941480 | AGATCACATGCTGAATTCCCC | 58.059 | 47.619 | 2.27 | 0.00 | 30.60 | 4.81 |
5714 | 5963 | 1.605710 | GATCACATGCTGAATTCCCCG | 59.394 | 52.381 | 2.27 | 0.00 | 30.60 | 5.73 |
5715 | 5964 | 0.394216 | TCACATGCTGAATTCCCCGG | 60.394 | 55.000 | 2.27 | 0.00 | 0.00 | 5.73 |
5716 | 5965 | 0.394216 | CACATGCTGAATTCCCCGGA | 60.394 | 55.000 | 0.73 | 0.00 | 0.00 | 5.14 |
5717 | 5966 | 0.107017 | ACATGCTGAATTCCCCGGAG | 60.107 | 55.000 | 0.73 | 0.00 | 0.00 | 4.63 |
5718 | 5967 | 0.181114 | CATGCTGAATTCCCCGGAGA | 59.819 | 55.000 | 0.73 | 0.00 | 0.00 | 3.71 |
5719 | 5968 | 0.181350 | ATGCTGAATTCCCCGGAGAC | 59.819 | 55.000 | 0.73 | 0.00 | 0.00 | 3.36 |
5720 | 5969 | 1.198094 | TGCTGAATTCCCCGGAGACA | 61.198 | 55.000 | 0.73 | 0.00 | 0.00 | 3.41 |
5721 | 5970 | 0.035439 | GCTGAATTCCCCGGAGACAA | 60.035 | 55.000 | 0.73 | 0.00 | 0.00 | 3.18 |
5722 | 5971 | 1.613255 | GCTGAATTCCCCGGAGACAAA | 60.613 | 52.381 | 0.73 | 0.00 | 0.00 | 2.83 |
5723 | 5972 | 2.945890 | GCTGAATTCCCCGGAGACAAAT | 60.946 | 50.000 | 0.73 | 0.00 | 0.00 | 2.32 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
52 | 53 | 6.428159 | GGAAGAATGACACACAAAGACATAGT | 59.572 | 38.462 | 0.00 | 0.00 | 0.00 | 2.12 |
53 | 54 | 6.427853 | TGGAAGAATGACACACAAAGACATAG | 59.572 | 38.462 | 0.00 | 0.00 | 0.00 | 2.23 |
64 | 65 | 5.245531 | GTGTTCCTATGGAAGAATGACACA | 58.754 | 41.667 | 10.37 | 0.00 | 42.88 | 3.72 |
169 | 171 | 7.500720 | TGCCATTTCTTATAGATCACACATG | 57.499 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
171 | 173 | 6.883756 | TGTTGCCATTTCTTATAGATCACACA | 59.116 | 34.615 | 0.00 | 0.00 | 0.00 | 3.72 |
185 | 187 | 4.815846 | AGGAAATTGTGTTGTTGCCATTTC | 59.184 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
190 | 192 | 6.919721 | TCTTATAGGAAATTGTGTTGTTGCC | 58.080 | 36.000 | 0.00 | 0.00 | 0.00 | 4.52 |
197 | 199 | 7.232534 | TGCTGGTTTTCTTATAGGAAATTGTGT | 59.767 | 33.333 | 10.48 | 0.00 | 35.51 | 3.72 |
213 | 215 | 8.816640 | TCTAATCTTGATTTTTGCTGGTTTTC | 57.183 | 30.769 | 0.95 | 0.00 | 0.00 | 2.29 |
257 | 259 | 6.769822 | CAGGATGTAAAGATAGAAGCACCATT | 59.230 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
259 | 261 | 5.396772 | CCAGGATGTAAAGATAGAAGCACCA | 60.397 | 44.000 | 0.00 | 0.00 | 0.00 | 4.17 |
260 | 262 | 5.059833 | CCAGGATGTAAAGATAGAAGCACC | 58.940 | 45.833 | 0.00 | 0.00 | 0.00 | 5.01 |
277 | 280 | 3.074390 | TGTTGACAAATCACTCCCAGGAT | 59.926 | 43.478 | 0.00 | 0.00 | 33.38 | 3.24 |
281 | 284 | 3.156293 | CCATGTTGACAAATCACTCCCA | 58.844 | 45.455 | 0.00 | 0.00 | 33.38 | 4.37 |
287 | 290 | 3.005684 | GTCCTTGCCATGTTGACAAATCA | 59.994 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
293 | 296 | 3.665745 | AAATGTCCTTGCCATGTTGAC | 57.334 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
294 | 297 | 5.479724 | TCATAAAATGTCCTTGCCATGTTGA | 59.520 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
295 | 298 | 5.722263 | TCATAAAATGTCCTTGCCATGTTG | 58.278 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
296 | 299 | 5.999205 | TCATAAAATGTCCTTGCCATGTT | 57.001 | 34.783 | 0.00 | 0.00 | 0.00 | 2.71 |
297 | 300 | 7.844493 | ATATCATAAAATGTCCTTGCCATGT | 57.156 | 32.000 | 0.00 | 0.00 | 0.00 | 3.21 |
298 | 301 | 7.964559 | CGTATATCATAAAATGTCCTTGCCATG | 59.035 | 37.037 | 0.00 | 0.00 | 0.00 | 3.66 |
299 | 302 | 7.665559 | ACGTATATCATAAAATGTCCTTGCCAT | 59.334 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
300 | 303 | 6.995686 | ACGTATATCATAAAATGTCCTTGCCA | 59.004 | 34.615 | 0.00 | 0.00 | 0.00 | 4.92 |
301 | 304 | 7.298122 | CACGTATATCATAAAATGTCCTTGCC | 58.702 | 38.462 | 0.00 | 0.00 | 0.00 | 4.52 |
303 | 306 | 8.601845 | TCCACGTATATCATAAAATGTCCTTG | 57.398 | 34.615 | 0.00 | 0.00 | 0.00 | 3.61 |
304 | 307 | 9.273016 | CTTCCACGTATATCATAAAATGTCCTT | 57.727 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
305 | 308 | 8.429641 | ACTTCCACGTATATCATAAAATGTCCT | 58.570 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
306 | 309 | 8.495949 | CACTTCCACGTATATCATAAAATGTCC | 58.504 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
307 | 310 | 9.042008 | ACACTTCCACGTATATCATAAAATGTC | 57.958 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
308 | 311 | 8.958119 | ACACTTCCACGTATATCATAAAATGT | 57.042 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
309 | 312 | 9.261180 | AGACACTTCCACGTATATCATAAAATG | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
314 | 317 | 9.170734 | GGTATAGACACTTCCACGTATATCATA | 57.829 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
315 | 318 | 7.668469 | TGGTATAGACACTTCCACGTATATCAT | 59.332 | 37.037 | 0.00 | 0.00 | 0.00 | 2.45 |
321 | 324 | 3.696051 | GGTGGTATAGACACTTCCACGTA | 59.304 | 47.826 | 0.00 | 0.00 | 46.36 | 3.57 |
333 | 336 | 1.688772 | GAGCGTCTGGGTGGTATAGA | 58.311 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
337 | 340 | 3.066190 | CGGAGCGTCTGGGTGGTA | 61.066 | 66.667 | 0.00 | 0.00 | 0.00 | 3.25 |
350 | 353 | 2.417933 | CTCCTTTGAAATGTCTGCGGAG | 59.582 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
355 | 358 | 9.485206 | AAATCATTTTCTCCTTTGAAATGTCTG | 57.515 | 29.630 | 7.62 | 0.00 | 36.07 | 3.51 |
383 | 386 | 5.008811 | CACCGGTAGTTTTGTGGTTTATTCA | 59.991 | 40.000 | 6.87 | 0.00 | 0.00 | 2.57 |
385 | 388 | 4.888823 | ACACCGGTAGTTTTGTGGTTTATT | 59.111 | 37.500 | 6.87 | 0.00 | 33.07 | 1.40 |
393 | 396 | 2.943036 | ATGGACACCGGTAGTTTTGT | 57.057 | 45.000 | 6.87 | 0.00 | 0.00 | 2.83 |
395 | 398 | 5.593502 | TGTTTTAATGGACACCGGTAGTTTT | 59.406 | 36.000 | 6.87 | 6.50 | 0.00 | 2.43 |
403 | 406 | 3.612472 | ACGTTGTTTTAATGGACACCG | 57.388 | 42.857 | 3.67 | 3.67 | 37.63 | 4.94 |
419 | 422 | 9.666626 | TTCGTTATATTTCAAATCAACAACGTT | 57.333 | 25.926 | 13.59 | 0.00 | 37.90 | 3.99 |
423 | 426 | 9.554724 | GCTCTTCGTTATATTTCAAATCAACAA | 57.445 | 29.630 | 7.80 | 2.65 | 0.00 | 2.83 |
424 | 427 | 8.181573 | GGCTCTTCGTTATATTTCAAATCAACA | 58.818 | 33.333 | 7.80 | 0.00 | 0.00 | 3.33 |
433 | 436 | 6.317893 | TGAAAAGGGGCTCTTCGTTATATTTC | 59.682 | 38.462 | 0.00 | 0.00 | 33.94 | 2.17 |
434 | 437 | 6.184789 | TGAAAAGGGGCTCTTCGTTATATTT | 58.815 | 36.000 | 0.00 | 0.00 | 33.94 | 1.40 |
485 | 488 | 5.056330 | CGTCGTGTCGATGTGTTTATTTTTG | 59.944 | 40.000 | 0.00 | 0.00 | 38.42 | 2.44 |
495 | 498 | 1.519343 | TGTTTTCGTCGTGTCGATGTG | 59.481 | 47.619 | 10.39 | 0.00 | 42.61 | 3.21 |
496 | 499 | 1.842720 | TGTTTTCGTCGTGTCGATGT | 58.157 | 45.000 | 10.39 | 0.00 | 42.61 | 3.06 |
550 | 553 | 0.947180 | TTCTTTCGGCGAAAGGTCCG | 60.947 | 55.000 | 43.84 | 28.88 | 46.15 | 4.79 |
655 | 658 | 4.086457 | GGGAGCAAAATAGGTCTTTTCCA | 58.914 | 43.478 | 0.00 | 0.00 | 36.33 | 3.53 |
656 | 659 | 3.447586 | GGGGAGCAAAATAGGTCTTTTCC | 59.552 | 47.826 | 0.00 | 0.00 | 36.33 | 3.13 |
685 | 691 | 2.053627 | CCACAATTTTCTCGCAGCAAC | 58.946 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
692 | 698 | 7.636259 | TTTATCAAAAGCCACAATTTTCTCG | 57.364 | 32.000 | 0.00 | 0.00 | 0.00 | 4.04 |
755 | 761 | 3.950794 | CTCGCCCGCTAGGTTGCAA | 62.951 | 63.158 | 0.00 | 0.00 | 38.26 | 4.08 |
756 | 762 | 4.451150 | CTCGCCCGCTAGGTTGCA | 62.451 | 66.667 | 0.00 | 0.00 | 38.26 | 4.08 |
757 | 763 | 4.143333 | TCTCGCCCGCTAGGTTGC | 62.143 | 66.667 | 0.00 | 0.00 | 38.26 | 4.17 |
758 | 764 | 2.105128 | CTCTCGCCCGCTAGGTTG | 59.895 | 66.667 | 0.00 | 0.00 | 38.26 | 3.77 |
759 | 765 | 2.044252 | TCTCTCGCCCGCTAGGTT | 60.044 | 61.111 | 0.00 | 0.00 | 38.26 | 3.50 |
760 | 766 | 2.517402 | CTCTCTCGCCCGCTAGGT | 60.517 | 66.667 | 0.00 | 0.00 | 38.26 | 3.08 |
774 | 780 | 4.093743 | GGAACCCTTTTCTCTCTCTCTCT | 58.906 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
775 | 781 | 3.835395 | TGGAACCCTTTTCTCTCTCTCTC | 59.165 | 47.826 | 0.00 | 0.00 | 0.00 | 3.20 |
776 | 782 | 3.837731 | CTGGAACCCTTTTCTCTCTCTCT | 59.162 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
777 | 783 | 3.835395 | TCTGGAACCCTTTTCTCTCTCTC | 59.165 | 47.826 | 0.00 | 0.00 | 0.00 | 3.20 |
1105 | 1154 | 0.677842 | AGCAAGCAAAGAAGCCAAGG | 59.322 | 50.000 | 0.00 | 0.00 | 34.23 | 3.61 |
1111 | 1160 | 2.401351 | GCCAAGAAGCAAGCAAAGAAG | 58.599 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
1250 | 1307 | 3.924144 | TGGCTGCACAAAACCATTAATC | 58.076 | 40.909 | 0.50 | 0.00 | 0.00 | 1.75 |
1379 | 1436 | 4.083590 | GCCTGCAGAGAGAACAGTAAAAAG | 60.084 | 45.833 | 17.39 | 0.00 | 0.00 | 2.27 |
1423 | 1480 | 1.600636 | AACACCACTCCCGTGCATG | 60.601 | 57.895 | 0.00 | 0.00 | 39.86 | 4.06 |
1442 | 1499 | 0.605860 | CCTATCCATGGCTGCAGAGC | 60.606 | 60.000 | 20.43 | 2.97 | 45.40 | 4.09 |
1466 | 1523 | 2.126882 | AGCCCTTCAGCCATGTATGTA | 58.873 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
1467 | 1524 | 0.921896 | AGCCCTTCAGCCATGTATGT | 59.078 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
1468 | 1525 | 1.679680 | CAAGCCCTTCAGCCATGTATG | 59.320 | 52.381 | 0.00 | 0.00 | 0.00 | 2.39 |
1469 | 1526 | 1.410648 | CCAAGCCCTTCAGCCATGTAT | 60.411 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
1499 | 1556 | 5.931441 | ACGAATGCCATCTAATCTAAAGC | 57.069 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
1594 | 1651 | 2.169179 | GACGAATGAAAACATCGCAGC | 58.831 | 47.619 | 0.00 | 0.00 | 40.09 | 5.25 |
1728 | 1786 | 3.953612 | AGACAAGTTTCCAACAGCAATCA | 59.046 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
1988 | 2047 | 2.492012 | CAAGGCTGCAGGATATCTCAC | 58.508 | 52.381 | 17.12 | 0.00 | 0.00 | 3.51 |
2055 | 2114 | 3.571401 | CCCAGTTTGCAGAAGAACTTCAT | 59.429 | 43.478 | 15.43 | 0.39 | 41.84 | 2.57 |
2056 | 2115 | 2.951642 | CCCAGTTTGCAGAAGAACTTCA | 59.048 | 45.455 | 15.43 | 0.00 | 41.84 | 3.02 |
2224 | 2285 | 5.953571 | TGGATAGCCTCACTGAAGATAGTA | 58.046 | 41.667 | 0.00 | 0.00 | 34.31 | 1.82 |
2246 | 2307 | 8.550376 | CACCACCATTTAAACAAAAGAATTCTG | 58.450 | 33.333 | 9.17 | 0.00 | 0.00 | 3.02 |
2278 | 2339 | 5.512788 | GTGATGCAGTCGATGTAAATTTTGG | 59.487 | 40.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2379 | 2440 | 6.278363 | TCAACCGTTCCTTAGATATACTTGC | 58.722 | 40.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2380 | 2441 | 7.926555 | ACATCAACCGTTCCTTAGATATACTTG | 59.073 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
2440 | 2501 | 5.027293 | TGATCATTCACAGTAGGTCCATG | 57.973 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
2487 | 2548 | 7.148804 | GCAGATATCAAAAAGCATATGCACATG | 60.149 | 37.037 | 28.62 | 19.93 | 45.16 | 3.21 |
2550 | 2611 | 0.736053 | TTTCACAACCAAGGCACGAC | 59.264 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
2633 | 2694 | 6.601332 | ACAAGAAGGTCAGGTGAGAATTTAA | 58.399 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2690 | 2751 | 0.106719 | CACTGAACCCAGGGTTGTGT | 60.107 | 55.000 | 30.03 | 22.00 | 46.95 | 3.72 |
2900 | 2961 | 3.812053 | GCATGCACCTTCTTGGAGTATAG | 59.188 | 47.826 | 14.21 | 0.00 | 39.71 | 1.31 |
2950 | 3011 | 9.442062 | TGTATCTACAGGGTCCATTTTATAGAA | 57.558 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
3114 | 3181 | 7.095523 | GCACAAACAATTCATCAGTATTGCTTT | 60.096 | 33.333 | 0.00 | 0.00 | 36.36 | 3.51 |
3117 | 3184 | 5.865552 | AGCACAAACAATTCATCAGTATTGC | 59.134 | 36.000 | 0.00 | 0.00 | 36.36 | 3.56 |
3132 | 3199 | 5.181748 | AGTTAAAAATGGCAAGCACAAACA | 58.818 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
3278 | 3346 | 4.256920 | CAAGTTAGAGGCAGCATACACTT | 58.743 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3490 | 3559 | 2.696187 | GCAAACTTTGGTTACCTTCCCA | 59.304 | 45.455 | 2.07 | 0.00 | 34.90 | 4.37 |
3533 | 3602 | 8.422566 | ACTGAAGAAGCACTAGTAAGTTAACTT | 58.577 | 33.333 | 23.58 | 23.58 | 39.85 | 2.66 |
3535 | 3604 | 8.590719 | AACTGAAGAAGCACTAGTAAGTTAAC | 57.409 | 34.615 | 0.00 | 0.00 | 31.97 | 2.01 |
3566 | 3637 | 9.574458 | GCTATAACTATGTGTCGTAATGATGAT | 57.426 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
3705 | 3780 | 5.304778 | GGTTATGAAAAGCCAAACATGGTT | 58.695 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
3847 | 3945 | 8.621532 | TGGACAGAATAGAAATATATTGCACC | 57.378 | 34.615 | 6.21 | 0.00 | 0.00 | 5.01 |
3882 | 3980 | 8.940768 | TTTATGAGGAACAAAAAGAAAGTTGG | 57.059 | 30.769 | 0.00 | 0.00 | 0.00 | 3.77 |
3909 | 4007 | 8.238631 | GGTATAAATAGCGAAACAGGAAAACAA | 58.761 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
3968 | 4066 | 1.270678 | ACGTAGGAGAAACACAAGGCC | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
3969 | 4067 | 2.165319 | ACGTAGGAGAAACACAAGGC | 57.835 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3982 | 4080 | 4.745649 | ACTTAAGCTCTTAGCAACGTAGG | 58.254 | 43.478 | 1.29 | 0.00 | 45.56 | 3.18 |
4012 | 4110 | 9.029368 | CCTCCTGGAAGAAATAAAGAAGAAAAT | 57.971 | 33.333 | 0.00 | 0.00 | 34.07 | 1.82 |
4017 | 4115 | 6.476378 | TGTCCTCCTGGAAGAAATAAAGAAG | 58.524 | 40.000 | 0.00 | 0.00 | 45.18 | 2.85 |
4024 | 4122 | 2.646798 | AGCTTGTCCTCCTGGAAGAAAT | 59.353 | 45.455 | 0.00 | 0.00 | 45.18 | 2.17 |
4032 | 4131 | 0.457851 | CCTCGTAGCTTGTCCTCCTG | 59.542 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4076 | 4175 | 7.095857 | GCCTCTATCAAGATATGAAGTTGTTCG | 60.096 | 40.741 | 0.00 | 0.00 | 42.54 | 3.95 |
4160 | 4259 | 1.168714 | CCACTGGCTTTAGCAGTTCC | 58.831 | 55.000 | 3.88 | 0.00 | 44.36 | 3.62 |
4378 | 4622 | 7.924940 | GGAACCAATCAAGAGAGATCAATAAC | 58.075 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
4449 | 4693 | 8.459635 | TGTGCAATTGTAAGTAAACACAAGTTA | 58.540 | 29.630 | 7.40 | 0.00 | 38.01 | 2.24 |
4690 | 4934 | 4.465512 | GCACGCTTCATGCCACCG | 62.466 | 66.667 | 0.00 | 0.00 | 37.08 | 4.94 |
4899 | 5143 | 1.002134 | CTTCCATTGTCCCAGCGGT | 60.002 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
4911 | 5155 | 3.375699 | CCAGGACCACTACTACTTCCAT | 58.624 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5040 | 5285 | 3.536570 | TCTCTAGTCTGTCTGTCATCGG | 58.463 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
5042 | 5287 | 3.315191 | GCCTCTCTAGTCTGTCTGTCATC | 59.685 | 52.174 | 0.00 | 0.00 | 0.00 | 2.92 |
5092 | 5337 | 1.820090 | CGCCTAACAGGGGGTGAAAAA | 60.820 | 52.381 | 1.44 | 0.00 | 43.90 | 1.94 |
5315 | 5564 | 6.149640 | CCAAAATTGCCACAAATTCATCATGA | 59.850 | 34.615 | 0.00 | 0.00 | 0.00 | 3.07 |
5316 | 5565 | 6.318628 | CCAAAATTGCCACAAATTCATCATG | 58.681 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
5317 | 5566 | 5.416326 | CCCAAAATTGCCACAAATTCATCAT | 59.584 | 36.000 | 0.00 | 0.00 | 0.00 | 2.45 |
5344 | 5593 | 1.001378 | AGACGCAAACAAACATGCCTC | 60.001 | 47.619 | 0.00 | 0.00 | 39.39 | 4.70 |
5361 | 5610 | 2.295349 | CCATCCATTATGCCAAGCAGAC | 59.705 | 50.000 | 0.00 | 0.00 | 43.65 | 3.51 |
5374 | 5623 | 1.113517 | GCAGCAGCATCCCATCCATT | 61.114 | 55.000 | 0.00 | 0.00 | 41.58 | 3.16 |
5377 | 5626 | 2.194212 | CAGCAGCAGCATCCCATCC | 61.194 | 63.158 | 3.17 | 0.00 | 45.49 | 3.51 |
5399 | 5648 | 4.135153 | CTCCCACGTGAGCCCGAG | 62.135 | 72.222 | 19.30 | 9.35 | 0.00 | 4.63 |
5402 | 5651 | 4.436998 | CGTCTCCCACGTGAGCCC | 62.437 | 72.222 | 19.30 | 0.73 | 44.07 | 5.19 |
5423 | 5672 | 4.947388 | ACAATAATGCAGAATTACCACGGT | 59.053 | 37.500 | 0.00 | 0.00 | 33.53 | 4.83 |
5450 | 5699 | 8.673711 | GCAGAATTACCACATTTGTATCTACAA | 58.326 | 33.333 | 0.00 | 0.00 | 43.80 | 2.41 |
5451 | 5700 | 7.826744 | TGCAGAATTACCACATTTGTATCTACA | 59.173 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
5452 | 5701 | 8.122952 | GTGCAGAATTACCACATTTGTATCTAC | 58.877 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
5453 | 5702 | 8.046708 | AGTGCAGAATTACCACATTTGTATCTA | 58.953 | 33.333 | 0.00 | 0.00 | 32.09 | 1.98 |
5454 | 5703 | 6.886459 | AGTGCAGAATTACCACATTTGTATCT | 59.114 | 34.615 | 0.00 | 0.00 | 32.09 | 1.98 |
5455 | 5704 | 7.088589 | AGTGCAGAATTACCACATTTGTATC | 57.911 | 36.000 | 0.00 | 0.00 | 32.09 | 2.24 |
5456 | 5705 | 8.752005 | ATAGTGCAGAATTACCACATTTGTAT | 57.248 | 30.769 | 0.00 | 0.00 | 32.09 | 2.29 |
5457 | 5706 | 8.458052 | CAATAGTGCAGAATTACCACATTTGTA | 58.542 | 33.333 | 0.00 | 0.00 | 32.09 | 2.41 |
5458 | 5707 | 7.039784 | ACAATAGTGCAGAATTACCACATTTGT | 60.040 | 33.333 | 0.00 | 12.31 | 34.73 | 2.83 |
5459 | 5708 | 7.315142 | ACAATAGTGCAGAATTACCACATTTG | 58.685 | 34.615 | 0.00 | 9.14 | 33.58 | 2.32 |
5460 | 5709 | 7.466746 | ACAATAGTGCAGAATTACCACATTT | 57.533 | 32.000 | 0.00 | 0.00 | 32.09 | 2.32 |
5461 | 5710 | 7.039784 | ACAACAATAGTGCAGAATTACCACATT | 60.040 | 33.333 | 0.00 | 2.23 | 32.09 | 2.71 |
5462 | 5711 | 6.434028 | ACAACAATAGTGCAGAATTACCACAT | 59.566 | 34.615 | 0.00 | 0.00 | 32.09 | 3.21 |
5463 | 5712 | 5.767665 | ACAACAATAGTGCAGAATTACCACA | 59.232 | 36.000 | 0.00 | 0.00 | 32.09 | 4.17 |
5464 | 5713 | 6.254281 | ACAACAATAGTGCAGAATTACCAC | 57.746 | 37.500 | 0.00 | 0.00 | 0.00 | 4.16 |
5465 | 5714 | 6.892658 | AACAACAATAGTGCAGAATTACCA | 57.107 | 33.333 | 0.00 | 0.00 | 0.00 | 3.25 |
5466 | 5715 | 6.586082 | CCAAACAACAATAGTGCAGAATTACC | 59.414 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
5467 | 5716 | 7.367285 | TCCAAACAACAATAGTGCAGAATTAC | 58.633 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
5468 | 5717 | 7.517614 | TCCAAACAACAATAGTGCAGAATTA | 57.482 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5469 | 5718 | 6.403866 | TCCAAACAACAATAGTGCAGAATT | 57.596 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
5470 | 5719 | 6.265196 | TCTTCCAAACAACAATAGTGCAGAAT | 59.735 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
5471 | 5720 | 5.592282 | TCTTCCAAACAACAATAGTGCAGAA | 59.408 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5472 | 5721 | 5.129634 | TCTTCCAAACAACAATAGTGCAGA | 58.870 | 37.500 | 0.00 | 0.00 | 0.00 | 4.26 |
5473 | 5722 | 5.437289 | TCTTCCAAACAACAATAGTGCAG | 57.563 | 39.130 | 0.00 | 0.00 | 0.00 | 4.41 |
5474 | 5723 | 6.488344 | TGTATCTTCCAAACAACAATAGTGCA | 59.512 | 34.615 | 0.00 | 0.00 | 0.00 | 4.57 |
5475 | 5724 | 6.908825 | TGTATCTTCCAAACAACAATAGTGC | 58.091 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5476 | 5725 | 8.322906 | TCTGTATCTTCCAAACAACAATAGTG | 57.677 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
5477 | 5726 | 8.950210 | CATCTGTATCTTCCAAACAACAATAGT | 58.050 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
5478 | 5727 | 7.912250 | GCATCTGTATCTTCCAAACAACAATAG | 59.088 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
5479 | 5728 | 7.392953 | TGCATCTGTATCTTCCAAACAACAATA | 59.607 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
5480 | 5729 | 6.209192 | TGCATCTGTATCTTCCAAACAACAAT | 59.791 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
5481 | 5730 | 5.534278 | TGCATCTGTATCTTCCAAACAACAA | 59.466 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
5482 | 5731 | 5.069318 | TGCATCTGTATCTTCCAAACAACA | 58.931 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
5483 | 5732 | 5.627499 | TGCATCTGTATCTTCCAAACAAC | 57.373 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
5484 | 5733 | 9.797642 | ATATATGCATCTGTATCTTCCAAACAA | 57.202 | 29.630 | 0.19 | 0.00 | 0.00 | 2.83 |
5485 | 5734 | 9.223099 | CATATATGCATCTGTATCTTCCAAACA | 57.777 | 33.333 | 0.19 | 0.00 | 0.00 | 2.83 |
5503 | 5752 | 4.873817 | TGCATTTTCCTGCACATATATGC | 58.126 | 39.130 | 12.79 | 0.00 | 46.76 | 3.14 |
5513 | 5762 | 2.231964 | TCCACTGAATGCATTTTCCTGC | 59.768 | 45.455 | 14.33 | 0.00 | 42.62 | 4.85 |
5514 | 5763 | 4.524316 | TTCCACTGAATGCATTTTCCTG | 57.476 | 40.909 | 14.33 | 7.58 | 0.00 | 3.86 |
5515 | 5764 | 5.549742 | TTTTCCACTGAATGCATTTTCCT | 57.450 | 34.783 | 14.33 | 0.00 | 0.00 | 3.36 |
5516 | 5765 | 6.806388 | ATTTTTCCACTGAATGCATTTTCC | 57.194 | 33.333 | 14.33 | 1.20 | 0.00 | 3.13 |
5517 | 5766 | 9.153721 | TGATATTTTTCCACTGAATGCATTTTC | 57.846 | 29.630 | 14.33 | 2.94 | 0.00 | 2.29 |
5518 | 5767 | 9.158233 | CTGATATTTTTCCACTGAATGCATTTT | 57.842 | 29.630 | 14.33 | 0.00 | 0.00 | 1.82 |
5519 | 5768 | 7.279313 | GCTGATATTTTTCCACTGAATGCATTT | 59.721 | 33.333 | 14.33 | 0.00 | 0.00 | 2.32 |
5520 | 5769 | 6.759827 | GCTGATATTTTTCCACTGAATGCATT | 59.240 | 34.615 | 12.83 | 12.83 | 0.00 | 3.56 |
5521 | 5770 | 6.278363 | GCTGATATTTTTCCACTGAATGCAT | 58.722 | 36.000 | 0.00 | 0.00 | 0.00 | 3.96 |
5522 | 5771 | 5.394443 | GGCTGATATTTTTCCACTGAATGCA | 60.394 | 40.000 | 0.00 | 0.00 | 0.00 | 3.96 |
5523 | 5772 | 5.045872 | GGCTGATATTTTTCCACTGAATGC | 58.954 | 41.667 | 0.00 | 0.00 | 0.00 | 3.56 |
5524 | 5773 | 6.461110 | AGGCTGATATTTTTCCACTGAATG | 57.539 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
5525 | 5774 | 8.055181 | TCTTAGGCTGATATTTTTCCACTGAAT | 58.945 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
5526 | 5775 | 7.402054 | TCTTAGGCTGATATTTTTCCACTGAA | 58.598 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
5527 | 5776 | 6.957631 | TCTTAGGCTGATATTTTTCCACTGA | 58.042 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5528 | 5777 | 7.630242 | TTCTTAGGCTGATATTTTTCCACTG | 57.370 | 36.000 | 0.00 | 0.00 | 0.00 | 3.66 |
5529 | 5778 | 8.829373 | AATTCTTAGGCTGATATTTTTCCACT | 57.171 | 30.769 | 0.00 | 0.00 | 0.00 | 4.00 |
5530 | 5779 | 9.875691 | AAAATTCTTAGGCTGATATTTTTCCAC | 57.124 | 29.630 | 0.00 | 0.00 | 0.00 | 4.02 |
5539 | 5788 | 9.859427 | CAATGTTTGAAAATTCTTAGGCTGATA | 57.141 | 29.630 | 0.00 | 0.00 | 0.00 | 2.15 |
5540 | 5789 | 7.820872 | CCAATGTTTGAAAATTCTTAGGCTGAT | 59.179 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
5541 | 5790 | 7.015098 | TCCAATGTTTGAAAATTCTTAGGCTGA | 59.985 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
5542 | 5791 | 7.116805 | GTCCAATGTTTGAAAATTCTTAGGCTG | 59.883 | 37.037 | 0.00 | 0.00 | 0.00 | 4.85 |
5543 | 5792 | 7.015584 | AGTCCAATGTTTGAAAATTCTTAGGCT | 59.984 | 33.333 | 0.00 | 0.00 | 0.00 | 4.58 |
5544 | 5793 | 7.154656 | AGTCCAATGTTTGAAAATTCTTAGGC | 58.845 | 34.615 | 0.00 | 0.00 | 0.00 | 3.93 |
5548 | 5797 | 9.883142 | TGTTTAGTCCAATGTTTGAAAATTCTT | 57.117 | 25.926 | 0.00 | 0.00 | 0.00 | 2.52 |
5549 | 5798 | 9.883142 | TTGTTTAGTCCAATGTTTGAAAATTCT | 57.117 | 25.926 | 0.00 | 0.00 | 0.00 | 2.40 |
5551 | 5800 | 9.883142 | TCTTGTTTAGTCCAATGTTTGAAAATT | 57.117 | 25.926 | 0.00 | 0.00 | 0.00 | 1.82 |
5553 | 5802 | 9.528018 | GATCTTGTTTAGTCCAATGTTTGAAAA | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
5554 | 5803 | 8.912988 | AGATCTTGTTTAGTCCAATGTTTGAAA | 58.087 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
5555 | 5804 | 8.463930 | AGATCTTGTTTAGTCCAATGTTTGAA | 57.536 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
5556 | 5805 | 9.219603 | CTAGATCTTGTTTAGTCCAATGTTTGA | 57.780 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
5557 | 5806 | 7.965107 | GCTAGATCTTGTTTAGTCCAATGTTTG | 59.035 | 37.037 | 0.00 | 0.00 | 0.00 | 2.93 |
5558 | 5807 | 7.885399 | AGCTAGATCTTGTTTAGTCCAATGTTT | 59.115 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
5559 | 5808 | 7.398024 | AGCTAGATCTTGTTTAGTCCAATGTT | 58.602 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
5560 | 5809 | 6.951971 | AGCTAGATCTTGTTTAGTCCAATGT | 58.048 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
5561 | 5810 | 7.254252 | CGAAGCTAGATCTTGTTTAGTCCAATG | 60.254 | 40.741 | 0.00 | 0.00 | 0.00 | 2.82 |
5562 | 5811 | 6.758886 | CGAAGCTAGATCTTGTTTAGTCCAAT | 59.241 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
5563 | 5812 | 6.100004 | CGAAGCTAGATCTTGTTTAGTCCAA | 58.900 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
5564 | 5813 | 5.185249 | ACGAAGCTAGATCTTGTTTAGTCCA | 59.815 | 40.000 | 11.89 | 0.00 | 0.00 | 4.02 |
5565 | 5814 | 5.652518 | ACGAAGCTAGATCTTGTTTAGTCC | 58.347 | 41.667 | 11.89 | 0.00 | 0.00 | 3.85 |
5566 | 5815 | 7.474190 | AGTACGAAGCTAGATCTTGTTTAGTC | 58.526 | 38.462 | 18.30 | 12.26 | 0.00 | 2.59 |
5567 | 5816 | 7.393841 | AGTACGAAGCTAGATCTTGTTTAGT | 57.606 | 36.000 | 18.62 | 18.62 | 0.00 | 2.24 |
5568 | 5817 | 7.253817 | GCAAGTACGAAGCTAGATCTTGTTTAG | 60.254 | 40.741 | 0.00 | 6.43 | 34.99 | 1.85 |
5569 | 5818 | 6.530534 | GCAAGTACGAAGCTAGATCTTGTTTA | 59.469 | 38.462 | 0.00 | 0.00 | 34.99 | 2.01 |
5570 | 5819 | 5.348997 | GCAAGTACGAAGCTAGATCTTGTTT | 59.651 | 40.000 | 0.00 | 2.70 | 34.99 | 2.83 |
5571 | 5820 | 4.865365 | GCAAGTACGAAGCTAGATCTTGTT | 59.135 | 41.667 | 0.00 | 0.00 | 34.99 | 2.83 |
5572 | 5821 | 4.158764 | AGCAAGTACGAAGCTAGATCTTGT | 59.841 | 41.667 | 0.00 | 6.66 | 36.73 | 3.16 |
5573 | 5822 | 4.502282 | CAGCAAGTACGAAGCTAGATCTTG | 59.498 | 45.833 | 0.00 | 0.00 | 36.73 | 3.02 |
5574 | 5823 | 4.440802 | CCAGCAAGTACGAAGCTAGATCTT | 60.441 | 45.833 | 0.00 | 0.00 | 36.73 | 2.40 |
5575 | 5824 | 3.067461 | CCAGCAAGTACGAAGCTAGATCT | 59.933 | 47.826 | 0.00 | 0.00 | 36.73 | 2.75 |
5576 | 5825 | 3.066900 | TCCAGCAAGTACGAAGCTAGATC | 59.933 | 47.826 | 8.96 | 0.00 | 36.73 | 2.75 |
5577 | 5826 | 3.024547 | TCCAGCAAGTACGAAGCTAGAT | 58.975 | 45.455 | 8.96 | 0.00 | 36.73 | 1.98 |
5578 | 5827 | 2.423892 | CTCCAGCAAGTACGAAGCTAGA | 59.576 | 50.000 | 8.96 | 7.15 | 36.73 | 2.43 |
5579 | 5828 | 2.164624 | ACTCCAGCAAGTACGAAGCTAG | 59.835 | 50.000 | 8.96 | 7.23 | 36.73 | 3.42 |
5580 | 5829 | 2.094700 | CACTCCAGCAAGTACGAAGCTA | 60.095 | 50.000 | 8.96 | 0.00 | 36.73 | 3.32 |
5581 | 5830 | 0.969894 | ACTCCAGCAAGTACGAAGCT | 59.030 | 50.000 | 4.27 | 4.27 | 39.63 | 3.74 |
5582 | 5831 | 1.071605 | CACTCCAGCAAGTACGAAGC | 58.928 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5583 | 5832 | 1.714794 | CCACTCCAGCAAGTACGAAG | 58.285 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
5584 | 5833 | 0.320421 | GCCACTCCAGCAAGTACGAA | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5585 | 5834 | 1.292223 | GCCACTCCAGCAAGTACGA | 59.708 | 57.895 | 0.00 | 0.00 | 0.00 | 3.43 |
5586 | 5835 | 2.094659 | CGCCACTCCAGCAAGTACG | 61.095 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
5587 | 5836 | 0.602905 | AACGCCACTCCAGCAAGTAC | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
5588 | 5837 | 0.602638 | CAACGCCACTCCAGCAAGTA | 60.603 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5589 | 5838 | 1.893808 | CAACGCCACTCCAGCAAGT | 60.894 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
5590 | 5839 | 2.620112 | CCAACGCCACTCCAGCAAG | 61.620 | 63.158 | 0.00 | 0.00 | 0.00 | 4.01 |
5591 | 5840 | 2.594303 | CCAACGCCACTCCAGCAA | 60.594 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
5607 | 5856 | 4.397010 | TGGGGGAAATGGCTGGCC | 62.397 | 66.667 | 4.43 | 4.43 | 0.00 | 5.36 |
5608 | 5857 | 2.761213 | CTGGGGGAAATGGCTGGC | 60.761 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
5609 | 5858 | 2.761213 | GCTGGGGGAAATGGCTGG | 60.761 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
5610 | 5859 | 1.305549 | AAGCTGGGGGAAATGGCTG | 60.306 | 57.895 | 0.00 | 0.00 | 33.30 | 4.85 |
5611 | 5860 | 1.305549 | CAAGCTGGGGGAAATGGCT | 60.306 | 57.895 | 0.00 | 0.00 | 34.52 | 4.75 |
5612 | 5861 | 1.305213 | TCAAGCTGGGGGAAATGGC | 60.305 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
5613 | 5862 | 1.325476 | GCTCAAGCTGGGGGAAATGG | 61.325 | 60.000 | 0.00 | 0.00 | 38.21 | 3.16 |
5614 | 5863 | 2.196319 | GCTCAAGCTGGGGGAAATG | 58.804 | 57.895 | 0.00 | 0.00 | 38.21 | 2.32 |
5615 | 5864 | 4.772678 | GCTCAAGCTGGGGGAAAT | 57.227 | 55.556 | 0.00 | 0.00 | 38.21 | 2.17 |
5625 | 5874 | 3.569548 | GCAGGAAAAGTAAAGCTCAAGC | 58.430 | 45.455 | 0.00 | 0.00 | 42.49 | 4.01 |
5626 | 5875 | 3.498397 | TCGCAGGAAAAGTAAAGCTCAAG | 59.502 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
5627 | 5876 | 3.250040 | GTCGCAGGAAAAGTAAAGCTCAA | 59.750 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
5628 | 5877 | 2.806244 | GTCGCAGGAAAAGTAAAGCTCA | 59.194 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
5629 | 5878 | 2.159824 | GGTCGCAGGAAAAGTAAAGCTC | 59.840 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
5630 | 5879 | 2.152016 | GGTCGCAGGAAAAGTAAAGCT | 58.848 | 47.619 | 0.00 | 0.00 | 0.00 | 3.74 |
5631 | 5880 | 1.877443 | TGGTCGCAGGAAAAGTAAAGC | 59.123 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
5632 | 5881 | 3.751175 | TCATGGTCGCAGGAAAAGTAAAG | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
5633 | 5882 | 3.745799 | TCATGGTCGCAGGAAAAGTAAA | 58.254 | 40.909 | 0.00 | 0.00 | 0.00 | 2.01 |
5634 | 5883 | 3.410631 | TCATGGTCGCAGGAAAAGTAA | 57.589 | 42.857 | 0.00 | 0.00 | 0.00 | 2.24 |
5635 | 5884 | 3.334691 | CTTCATGGTCGCAGGAAAAGTA | 58.665 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
5636 | 5885 | 2.154462 | CTTCATGGTCGCAGGAAAAGT | 58.846 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
5637 | 5886 | 1.470098 | CCTTCATGGTCGCAGGAAAAG | 59.530 | 52.381 | 0.00 | 0.00 | 0.00 | 2.27 |
5638 | 5887 | 1.533625 | CCTTCATGGTCGCAGGAAAA | 58.466 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
5639 | 5888 | 3.248043 | CCTTCATGGTCGCAGGAAA | 57.752 | 52.632 | 0.00 | 0.00 | 0.00 | 3.13 |
5649 | 5898 | 1.747355 | GTCCAGCATTCACCTTCATGG | 59.253 | 52.381 | 0.00 | 0.00 | 42.93 | 3.66 |
5650 | 5899 | 2.719739 | AGTCCAGCATTCACCTTCATG | 58.280 | 47.619 | 0.00 | 0.00 | 0.00 | 3.07 |
5651 | 5900 | 3.009916 | AGAAGTCCAGCATTCACCTTCAT | 59.990 | 43.478 | 0.00 | 0.00 | 32.68 | 2.57 |
5652 | 5901 | 2.373169 | AGAAGTCCAGCATTCACCTTCA | 59.627 | 45.455 | 0.00 | 0.00 | 32.68 | 3.02 |
5653 | 5902 | 3.064900 | AGAAGTCCAGCATTCACCTTC | 57.935 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
5654 | 5903 | 3.073650 | AGAAGAAGTCCAGCATTCACCTT | 59.926 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
5655 | 5904 | 2.641815 | AGAAGAAGTCCAGCATTCACCT | 59.358 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
5656 | 5905 | 2.746362 | CAGAAGAAGTCCAGCATTCACC | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
5657 | 5906 | 2.746362 | CCAGAAGAAGTCCAGCATTCAC | 59.254 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5658 | 5907 | 2.877300 | GCCAGAAGAAGTCCAGCATTCA | 60.877 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5659 | 5908 | 1.742268 | GCCAGAAGAAGTCCAGCATTC | 59.258 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
5660 | 5909 | 1.615384 | GGCCAGAAGAAGTCCAGCATT | 60.615 | 52.381 | 0.00 | 0.00 | 0.00 | 3.56 |
5661 | 5910 | 0.034670 | GGCCAGAAGAAGTCCAGCAT | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
5662 | 5911 | 1.376466 | GGCCAGAAGAAGTCCAGCA | 59.624 | 57.895 | 0.00 | 0.00 | 0.00 | 4.41 |
5663 | 5912 | 1.377856 | GGGCCAGAAGAAGTCCAGC | 60.378 | 63.158 | 4.39 | 0.00 | 0.00 | 4.85 |
5664 | 5913 | 1.301293 | GGGGCCAGAAGAAGTCCAG | 59.699 | 63.158 | 4.39 | 0.00 | 0.00 | 3.86 |
5665 | 5914 | 1.463214 | TGGGGCCAGAAGAAGTCCA | 60.463 | 57.895 | 4.39 | 0.00 | 0.00 | 4.02 |
5666 | 5915 | 1.301293 | CTGGGGCCAGAAGAAGTCC | 59.699 | 63.158 | 4.39 | 0.00 | 46.30 | 3.85 |
5667 | 5916 | 0.035915 | GACTGGGGCCAGAAGAAGTC | 60.036 | 60.000 | 4.39 | 4.04 | 46.30 | 3.01 |
5668 | 5917 | 0.768221 | TGACTGGGGCCAGAAGAAGT | 60.768 | 55.000 | 4.39 | 0.00 | 46.30 | 3.01 |
5669 | 5918 | 0.322008 | GTGACTGGGGCCAGAAGAAG | 60.322 | 60.000 | 4.39 | 0.00 | 46.30 | 2.85 |
5670 | 5919 | 1.761174 | GTGACTGGGGCCAGAAGAA | 59.239 | 57.895 | 4.39 | 0.00 | 46.30 | 2.52 |
5671 | 5920 | 2.224159 | GGTGACTGGGGCCAGAAGA | 61.224 | 63.158 | 4.39 | 0.00 | 46.30 | 2.87 |
5672 | 5921 | 2.190488 | GAGGTGACTGGGGCCAGAAG | 62.190 | 65.000 | 4.39 | 1.70 | 46.30 | 2.85 |
5673 | 5922 | 2.121963 | AGGTGACTGGGGCCAGAA | 60.122 | 61.111 | 4.39 | 0.00 | 46.30 | 3.02 |
5674 | 5923 | 2.607750 | GAGGTGACTGGGGCCAGA | 60.608 | 66.667 | 4.39 | 0.00 | 46.30 | 3.86 |
5676 | 5925 | 2.449518 | TTGAGGTGACTGGGGCCA | 60.450 | 61.111 | 4.39 | 0.00 | 44.43 | 5.36 |
5677 | 5926 | 1.566298 | ATCTTGAGGTGACTGGGGCC | 61.566 | 60.000 | 0.00 | 0.00 | 44.43 | 5.80 |
5678 | 5927 | 0.107459 | GATCTTGAGGTGACTGGGGC | 60.107 | 60.000 | 0.00 | 0.00 | 44.43 | 5.80 |
5679 | 5928 | 1.065854 | GTGATCTTGAGGTGACTGGGG | 60.066 | 57.143 | 0.00 | 0.00 | 44.43 | 4.96 |
5680 | 5929 | 1.625315 | TGTGATCTTGAGGTGACTGGG | 59.375 | 52.381 | 0.00 | 0.00 | 44.43 | 4.45 |
5681 | 5930 | 3.268330 | CATGTGATCTTGAGGTGACTGG | 58.732 | 50.000 | 0.00 | 0.00 | 44.43 | 4.00 |
5682 | 5931 | 2.676839 | GCATGTGATCTTGAGGTGACTG | 59.323 | 50.000 | 0.00 | 0.00 | 44.43 | 3.51 |
5683 | 5932 | 5.841815 | TCAGCATGTGATCTTGAGGTGACT | 61.842 | 45.833 | 0.00 | 0.00 | 40.52 | 3.41 |
5684 | 5933 | 2.676839 | CAGCATGTGATCTTGAGGTGAC | 59.323 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
5685 | 5934 | 2.568509 | TCAGCATGTGATCTTGAGGTGA | 59.431 | 45.455 | 0.00 | 0.69 | 37.40 | 4.02 |
5686 | 5935 | 2.981898 | TCAGCATGTGATCTTGAGGTG | 58.018 | 47.619 | 0.00 | 0.00 | 37.40 | 4.00 |
5687 | 5936 | 3.708403 | TTCAGCATGTGATCTTGAGGT | 57.292 | 42.857 | 0.00 | 0.00 | 37.40 | 3.85 |
5688 | 5937 | 4.036498 | GGAATTCAGCATGTGATCTTGAGG | 59.964 | 45.833 | 7.93 | 0.00 | 37.40 | 3.86 |
5689 | 5938 | 4.036498 | GGGAATTCAGCATGTGATCTTGAG | 59.964 | 45.833 | 7.93 | 0.00 | 37.40 | 3.02 |
5690 | 5939 | 3.949754 | GGGAATTCAGCATGTGATCTTGA | 59.050 | 43.478 | 7.93 | 0.00 | 37.40 | 3.02 |
5691 | 5940 | 3.067742 | GGGGAATTCAGCATGTGATCTTG | 59.932 | 47.826 | 7.93 | 0.00 | 37.40 | 3.02 |
5692 | 5941 | 3.294214 | GGGGAATTCAGCATGTGATCTT | 58.706 | 45.455 | 7.93 | 0.00 | 37.40 | 2.40 |
5693 | 5942 | 2.747467 | CGGGGAATTCAGCATGTGATCT | 60.747 | 50.000 | 7.93 | 0.00 | 37.40 | 2.75 |
5694 | 5943 | 1.605710 | CGGGGAATTCAGCATGTGATC | 59.394 | 52.381 | 7.93 | 0.00 | 37.40 | 2.92 |
5695 | 5944 | 1.683943 | CGGGGAATTCAGCATGTGAT | 58.316 | 50.000 | 7.93 | 0.00 | 37.40 | 3.06 |
5696 | 5945 | 0.394216 | CCGGGGAATTCAGCATGTGA | 60.394 | 55.000 | 7.93 | 0.00 | 37.40 | 3.58 |
5697 | 5946 | 0.394216 | TCCGGGGAATTCAGCATGTG | 60.394 | 55.000 | 7.93 | 0.00 | 37.40 | 3.21 |
5698 | 5947 | 0.107017 | CTCCGGGGAATTCAGCATGT | 60.107 | 55.000 | 7.93 | 0.00 | 37.40 | 3.21 |
5699 | 5948 | 0.181114 | TCTCCGGGGAATTCAGCATG | 59.819 | 55.000 | 0.00 | 0.00 | 37.54 | 4.06 |
5700 | 5949 | 0.181350 | GTCTCCGGGGAATTCAGCAT | 59.819 | 55.000 | 5.00 | 0.00 | 0.00 | 3.79 |
5701 | 5950 | 1.198094 | TGTCTCCGGGGAATTCAGCA | 61.198 | 55.000 | 5.00 | 0.00 | 0.00 | 4.41 |
5702 | 5951 | 0.035439 | TTGTCTCCGGGGAATTCAGC | 60.035 | 55.000 | 5.00 | 0.00 | 0.00 | 4.26 |
5703 | 5952 | 2.489938 | TTTGTCTCCGGGGAATTCAG | 57.510 | 50.000 | 5.00 | 0.00 | 0.00 | 3.02 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.