Multiple sequence alignment - TraesCS5B01G475400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G475400 chr5B 100.000 3536 0 0 1 3536 648261570 648258035 0.000000e+00 6530.0
1 TraesCS5B01G475400 chr5B 86.191 1528 172 32 985 2499 648180885 648179384 0.000000e+00 1616.0
2 TraesCS5B01G475400 chr5B 83.078 981 137 19 1532 2501 648145429 648144467 0.000000e+00 865.0
3 TraesCS5B01G475400 chr5B 90.278 360 13 11 374 724 648300995 648300649 5.380000e-123 451.0
4 TraesCS5B01G475400 chr5B 84.577 201 22 5 112 311 648301178 648300986 1.300000e-44 191.0
5 TraesCS5B01G475400 chr5B 92.537 67 4 1 725 791 648300581 648300516 1.040000e-15 95.3
6 TraesCS5B01G475400 chr5A 93.636 1587 83 9 913 2497 643855614 643854044 0.000000e+00 2355.0
7 TraesCS5B01G475400 chr5A 89.080 1456 136 17 1046 2497 643735021 643733585 0.000000e+00 1786.0
8 TraesCS5B01G475400 chr5A 83.146 979 138 18 1532 2500 643626927 643625966 0.000000e+00 869.0
9 TraesCS5B01G475400 chr5A 94.217 415 21 3 2934 3346 12225028 12224615 6.440000e-177 630.0
10 TraesCS5B01G475400 chr5A 89.750 400 40 1 1027 1426 643453849 643453451 8.760000e-141 510.0
11 TraesCS5B01G475400 chr5A 84.984 313 26 11 426 726 643856251 643855948 7.420000e-77 298.0
12 TraesCS5B01G475400 chr5A 90.323 186 16 2 2738 2923 643733167 643732984 3.530000e-60 243.0
13 TraesCS5B01G475400 chr5A 99.138 116 1 0 1 116 561125383 561125268 3.580000e-50 209.0
14 TraesCS5B01G475400 chr5A 89.394 66 7 0 3418 3483 689653245 689653310 2.260000e-12 84.2
15 TraesCS5B01G475400 chr5A 91.525 59 5 0 2641 2699 643733232 643733174 8.140000e-12 82.4
16 TraesCS5B01G475400 chr5A 87.324 71 8 1 2631 2700 643853889 643853819 2.930000e-11 80.5
17 TraesCS5B01G475400 chr5D 88.252 1728 151 19 783 2497 515466456 515464768 0.000000e+00 2019.0
18 TraesCS5B01G475400 chr5D 86.118 1203 134 24 1030 2223 515424957 515423779 0.000000e+00 1266.0
19 TraesCS5B01G475400 chr5D 92.168 881 69 0 1617 2497 551243515 551242635 0.000000e+00 1245.0
20 TraesCS5B01G475400 chr5D 91.858 872 71 0 1617 2488 515568286 515567415 0.000000e+00 1218.0
21 TraesCS5B01G475400 chr5D 82.528 973 146 18 1532 2500 515411950 515410998 0.000000e+00 833.0
22 TraesCS5B01G475400 chr5D 86.901 626 51 14 960 1579 515568894 515568294 0.000000e+00 673.0
23 TraesCS5B01G475400 chr5D 86.262 626 56 14 960 1579 551244124 551243523 0.000000e+00 652.0
24 TraesCS5B01G475400 chr5D 93.011 186 10 3 2738 2923 515464347 515464165 5.820000e-68 268.0
25 TraesCS5B01G475400 chr5D 91.935 186 13 2 2738 2923 551242195 551242012 3.500000e-65 259.0
26 TraesCS5B01G475400 chr5D 92.169 166 11 2 112 276 515564652 515564488 2.120000e-57 233.0
27 TraesCS5B01G475400 chr5D 93.651 126 8 0 3411 3536 127153153 127153278 4.660000e-44 189.0
28 TraesCS5B01G475400 chr5D 98.592 71 1 0 374 444 515466796 515466726 3.710000e-25 126.0
29 TraesCS5B01G475400 chr5D 93.333 60 3 1 2641 2699 515464413 515464354 1.750000e-13 87.9
30 TraesCS5B01G475400 chr5D 93.220 59 4 0 2641 2699 551242260 551242202 1.750000e-13 87.9
31 TraesCS5B01G475400 chr5D 97.917 48 1 0 3414 3461 209398561 209398608 2.260000e-12 84.2
32 TraesCS5B01G475400 chr7D 95.355 409 17 2 2934 3340 63450701 63450293 0.000000e+00 649.0
33 TraesCS5B01G475400 chr7D 92.683 123 9 0 3414 3536 41436325 41436203 1.010000e-40 178.0
34 TraesCS5B01G475400 chr7D 83.333 120 20 0 3415 3534 576067317 576067436 1.040000e-20 111.0
35 TraesCS5B01G475400 chr6B 95.355 409 15 4 2934 3340 355968002 355967596 0.000000e+00 647.0
36 TraesCS5B01G475400 chr3B 94.471 416 19 4 2930 3341 785696770 785696355 3.850000e-179 638.0
37 TraesCS5B01G475400 chr3B 100.000 113 0 0 1 113 45522718 45522830 3.580000e-50 209.0
38 TraesCS5B01G475400 chr3B 99.138 116 1 0 1 116 688156354 688156239 3.580000e-50 209.0
39 TraesCS5B01G475400 chr3B 100.000 113 0 0 1 113 766049563 766049675 3.580000e-50 209.0
40 TraesCS5B01G475400 chr7B 94.647 411 19 2 2931 3341 2379640 2380047 4.980000e-178 634.0
41 TraesCS5B01G475400 chr7B 94.647 411 16 5 2934 3340 13257883 13257475 1.790000e-177 632.0
42 TraesCS5B01G475400 chr7B 99.138 116 1 0 1 116 717329069 717329184 3.580000e-50 209.0
43 TraesCS5B01G475400 chr7B 95.833 48 0 2 310 357 95002024 95001979 3.790000e-10 76.8
44 TraesCS5B01G475400 chr7B 95.833 48 0 2 310 357 95002267 95002222 3.790000e-10 76.8
45 TraesCS5B01G475400 chr7A 94.258 418 16 6 2934 3345 640496593 640497008 1.790000e-177 632.0
46 TraesCS5B01G475400 chr7A 93.765 417 20 4 2934 3345 625908597 625908182 3.880000e-174 621.0
47 TraesCS5B01G475400 chr7A 99.138 116 1 0 1 116 45016845 45016730 3.580000e-50 209.0
48 TraesCS5B01G475400 chr7A 89.916 119 12 0 3418 3536 723861805 723861687 1.700000e-33 154.0
49 TraesCS5B01G475400 chr2A 94.647 411 17 4 2934 3340 61475558 61475967 1.790000e-177 632.0
50 TraesCS5B01G475400 chr2A 89.526 401 40 2 1027 1426 766593084 766593483 1.130000e-139 507.0
51 TraesCS5B01G475400 chr2B 100.000 116 0 0 1 116 579989144 579989029 7.690000e-52 215.0
52 TraesCS5B01G475400 chrUn 99.138 116 1 0 1 116 240285645 240285530 3.580000e-50 209.0
53 TraesCS5B01G475400 chr3A 100.000 113 0 0 1 113 8568384 8568496 3.580000e-50 209.0
54 TraesCS5B01G475400 chr3A 97.917 48 1 0 3414 3461 644477790 644477837 2.260000e-12 84.2
55 TraesCS5B01G475400 chr1D 93.333 120 8 0 3417 3536 271661043 271661162 1.010000e-40 178.0
56 TraesCS5B01G475400 chr3D 97.917 48 1 0 3414 3461 77071878 77071831 2.260000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G475400 chr5B 648258035 648261570 3535 True 6530.000000 6530 100.000000 1 3536 1 chr5B.!!$R3 3535
1 TraesCS5B01G475400 chr5B 648179384 648180885 1501 True 1616.000000 1616 86.191000 985 2499 1 chr5B.!!$R2 1514
2 TraesCS5B01G475400 chr5B 648144467 648145429 962 True 865.000000 865 83.078000 1532 2501 1 chr5B.!!$R1 969
3 TraesCS5B01G475400 chr5B 648300516 648301178 662 True 245.766667 451 89.130667 112 791 3 chr5B.!!$R4 679
4 TraesCS5B01G475400 chr5A 643853819 643856251 2432 True 911.166667 2355 88.648000 426 2700 3 chr5A.!!$R6 2274
5 TraesCS5B01G475400 chr5A 643625966 643626927 961 True 869.000000 869 83.146000 1532 2500 1 chr5A.!!$R4 968
6 TraesCS5B01G475400 chr5A 643732984 643735021 2037 True 703.800000 1786 90.309333 1046 2923 3 chr5A.!!$R5 1877
7 TraesCS5B01G475400 chr5D 515423779 515424957 1178 True 1266.000000 1266 86.118000 1030 2223 1 chr5D.!!$R2 1193
8 TraesCS5B01G475400 chr5D 515410998 515411950 952 True 833.000000 833 82.528000 1532 2500 1 chr5D.!!$R1 968
9 TraesCS5B01G475400 chr5D 515564488 515568894 4406 True 708.000000 1218 90.309333 112 2488 3 chr5D.!!$R4 2376
10 TraesCS5B01G475400 chr5D 515464165 515466796 2631 True 625.225000 2019 93.297000 374 2923 4 chr5D.!!$R3 2549
11 TraesCS5B01G475400 chr5D 551242012 551244124 2112 True 560.975000 1245 90.896250 960 2923 4 chr5D.!!$R5 1963

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
82 83 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.0 0.00 0.00 0.00 2.69 F
147 148 0.101219 GGGAGTGCGCATCCATTTTC 59.899 55.0 28.31 14.57 38.70 2.29 F
902 1114 0.104120 TCAACCAGTGGTCAGTGACG 59.896 55.0 17.06 5.44 33.12 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1515 1747 1.097547 GGTGAACCATGGAGCATCGG 61.098 60.000 21.47 0.0 33.16 4.18 R
2084 2325 2.460330 CGAGTGCGCTCTTGGAAAT 58.540 52.632 24.01 0.0 39.53 2.17 R
2759 3487 0.032678 CCAGTTCAGCACACTCGTCT 59.967 55.000 0.00 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
22 23 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
23 24 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
24 25 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
25 26 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
26 27 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
27 28 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
28 29 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
29 30 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
30 31 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
31 32 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
32 33 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
33 34 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
44 45 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
45 46 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
46 47 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
47 48 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
48 49 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
49 50 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
50 51 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
51 52 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
52 53 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
53 54 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
54 55 4.642885 TCGCCGGAAATCCTGAAATAAATT 59.357 37.500 5.05 0.00 0.00 1.82
55 56 4.976116 CGCCGGAAATCCTGAAATAAATTC 59.024 41.667 5.05 0.00 38.60 2.17
56 57 5.449862 CGCCGGAAATCCTGAAATAAATTCA 60.450 40.000 5.05 0.00 45.71 2.57
70 71 7.862372 TGAAATAAATTCAGGAATAATGCGAGC 59.138 33.333 0.00 0.00 43.08 5.03
71 72 6.882610 ATAAATTCAGGAATAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
72 73 4.558538 AATTCAGGAATAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
73 74 1.953559 TCAGGAATAATGCGAGCACC 58.046 50.000 0.00 0.00 0.00 5.01
74 75 1.209261 TCAGGAATAATGCGAGCACCA 59.791 47.619 0.00 0.00 0.00 4.17
75 76 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
76 77 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
77 78 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
78 79 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
79 80 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
80 81 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
81 82 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
82 83 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
83 84 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
84 85 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
85 86 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
86 87 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
87 88 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
92 93 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
102 103 4.179896 CCTGGTGGGTTGGGGATA 57.820 61.111 0.00 0.00 0.00 2.59
103 104 1.613061 CCTGGTGGGTTGGGGATAC 59.387 63.158 0.00 0.00 0.00 2.24
122 123 1.980765 ACCACTGTCCATCTGATGTGT 59.019 47.619 15.95 6.89 32.12 3.72
123 124 2.373169 ACCACTGTCCATCTGATGTGTT 59.627 45.455 15.95 0.00 32.12 3.32
126 127 3.434641 CACTGTCCATCTGATGTGTTGAC 59.565 47.826 15.95 14.93 0.00 3.18
136 137 3.041940 GTGTTGACGGGGAGTGCG 61.042 66.667 0.00 0.00 0.00 5.34
137 138 4.980805 TGTTGACGGGGAGTGCGC 62.981 66.667 0.00 0.00 0.00 6.09
147 148 0.101219 GGGAGTGCGCATCCATTTTC 59.899 55.000 28.31 14.57 38.70 2.29
152 153 3.282021 AGTGCGCATCCATTTTCTATGT 58.718 40.909 15.91 0.00 0.00 2.29
161 162 9.013490 CGCATCCATTTTCTATGTTAAAAAGAG 57.987 33.333 0.00 0.00 30.20 2.85
189 190 8.743099 GCTTTATAAATCAAACGAAATAGTGGC 58.257 33.333 0.00 0.00 0.00 5.01
193 194 3.529634 TCAAACGAAATAGTGGCGTTG 57.470 42.857 0.00 0.00 46.15 4.10
197 198 1.396996 ACGAAATAGTGGCGTTGCATC 59.603 47.619 0.00 0.00 34.12 3.91
198 199 1.592110 CGAAATAGTGGCGTTGCATCG 60.592 52.381 12.78 12.78 0.00 3.84
199 200 0.732571 AAATAGTGGCGTTGCATCGG 59.267 50.000 18.16 1.34 0.00 4.18
206 207 1.381165 GGCGTTGCATCGGGGTTTAT 61.381 55.000 18.16 0.00 0.00 1.40
211 212 1.975660 TGCATCGGGGTTTATAAGGC 58.024 50.000 0.00 0.00 0.00 4.35
215 216 1.296984 TCGGGGTTTATAAGGCCCAA 58.703 50.000 21.50 11.14 44.07 4.12
219 220 3.073356 CGGGGTTTATAAGGCCCAAGATA 59.927 47.826 21.50 0.00 44.07 1.98
220 221 4.263771 CGGGGTTTATAAGGCCCAAGATAT 60.264 45.833 21.50 0.00 44.07 1.63
252 253 8.621532 AAGCACTTAAGATTAGACATCAAACA 57.378 30.769 10.09 0.00 0.00 2.83
253 254 8.798859 AGCACTTAAGATTAGACATCAAACAT 57.201 30.769 10.09 0.00 0.00 2.71
254 255 8.671921 AGCACTTAAGATTAGACATCAAACATG 58.328 33.333 10.09 0.00 0.00 3.21
255 256 8.668353 GCACTTAAGATTAGACATCAAACATGA 58.332 33.333 10.09 0.00 0.00 3.07
276 277 2.231964 ACATGGGCTAAACAATGTGCTG 59.768 45.455 0.00 0.00 0.00 4.41
284 285 1.401318 AACAATGTGCTGCCCTGCAA 61.401 50.000 0.00 0.00 45.12 4.08
289 290 2.123769 TGCTGCCCTGCAAACACT 60.124 55.556 0.00 0.00 40.29 3.55
301 303 2.950975 TGCAAACACTGATCTCAAAGCA 59.049 40.909 0.00 0.00 0.00 3.91
302 304 3.243168 TGCAAACACTGATCTCAAAGCAC 60.243 43.478 0.00 0.00 0.00 4.40
303 305 3.854784 GCAAACACTGATCTCAAAGCACC 60.855 47.826 0.00 0.00 0.00 5.01
304 306 3.498774 AACACTGATCTCAAAGCACCT 57.501 42.857 0.00 0.00 0.00 4.00
305 307 3.498774 ACACTGATCTCAAAGCACCTT 57.501 42.857 0.00 0.00 0.00 3.50
306 308 3.825328 ACACTGATCTCAAAGCACCTTT 58.175 40.909 0.00 0.00 33.58 3.11
307 309 3.817647 ACACTGATCTCAAAGCACCTTTC 59.182 43.478 0.00 0.00 30.60 2.62
308 310 3.190118 CACTGATCTCAAAGCACCTTTCC 59.810 47.826 0.00 0.00 30.60 3.13
309 311 2.751806 CTGATCTCAAAGCACCTTTCCC 59.248 50.000 0.00 0.00 30.60 3.97
310 312 2.095461 GATCTCAAAGCACCTTTCCCC 58.905 52.381 0.00 0.00 30.60 4.81
311 313 0.850100 TCTCAAAGCACCTTTCCCCA 59.150 50.000 0.00 0.00 30.60 4.96
312 314 1.202927 TCTCAAAGCACCTTTCCCCAG 60.203 52.381 0.00 0.00 30.60 4.45
313 315 0.555769 TCAAAGCACCTTTCCCCAGT 59.444 50.000 0.00 0.00 30.60 4.00
314 316 1.063266 TCAAAGCACCTTTCCCCAGTT 60.063 47.619 0.00 0.00 30.60 3.16
315 317 1.762370 CAAAGCACCTTTCCCCAGTTT 59.238 47.619 0.00 0.00 30.60 2.66
316 318 1.413118 AAGCACCTTTCCCCAGTTTG 58.587 50.000 0.00 0.00 0.00 2.93
317 319 0.261696 AGCACCTTTCCCCAGTTTGT 59.738 50.000 0.00 0.00 0.00 2.83
318 320 1.497286 AGCACCTTTCCCCAGTTTGTA 59.503 47.619 0.00 0.00 0.00 2.41
319 321 2.110011 AGCACCTTTCCCCAGTTTGTAT 59.890 45.455 0.00 0.00 0.00 2.29
320 322 2.492088 GCACCTTTCCCCAGTTTGTATC 59.508 50.000 0.00 0.00 0.00 2.24
321 323 3.089284 CACCTTTCCCCAGTTTGTATCC 58.911 50.000 0.00 0.00 0.00 2.59
322 324 2.042569 ACCTTTCCCCAGTTTGTATCCC 59.957 50.000 0.00 0.00 0.00 3.85
323 325 2.042433 CCTTTCCCCAGTTTGTATCCCA 59.958 50.000 0.00 0.00 0.00 4.37
324 326 2.891191 TTCCCCAGTTTGTATCCCAC 57.109 50.000 0.00 0.00 0.00 4.61
325 327 0.996583 TCCCCAGTTTGTATCCCACC 59.003 55.000 0.00 0.00 0.00 4.61
326 328 0.999712 CCCCAGTTTGTATCCCACCT 59.000 55.000 0.00 0.00 0.00 4.00
327 329 1.357761 CCCCAGTTTGTATCCCACCTT 59.642 52.381 0.00 0.00 0.00 3.50
328 330 2.578940 CCCCAGTTTGTATCCCACCTTA 59.421 50.000 0.00 0.00 0.00 2.69
329 331 3.204382 CCCCAGTTTGTATCCCACCTTAT 59.796 47.826 0.00 0.00 0.00 1.73
330 332 4.207165 CCCAGTTTGTATCCCACCTTATG 58.793 47.826 0.00 0.00 0.00 1.90
331 333 4.325030 CCCAGTTTGTATCCCACCTTATGT 60.325 45.833 0.00 0.00 0.00 2.29
332 334 4.640201 CCAGTTTGTATCCCACCTTATGTG 59.360 45.833 0.00 0.00 45.01 3.21
353 355 7.537596 TGTGGAATTTGATCAATAAAGTGGT 57.462 32.000 9.40 0.00 0.00 4.16
354 356 7.601856 TGTGGAATTTGATCAATAAAGTGGTC 58.398 34.615 9.40 0.00 0.00 4.02
355 357 7.451255 TGTGGAATTTGATCAATAAAGTGGTCT 59.549 33.333 9.40 0.00 29.43 3.85
356 358 8.306761 GTGGAATTTGATCAATAAAGTGGTCTT 58.693 33.333 9.40 0.00 35.14 3.01
357 359 9.527157 TGGAATTTGATCAATAAAGTGGTCTTA 57.473 29.630 9.40 0.00 33.09 2.10
358 360 9.788960 GGAATTTGATCAATAAAGTGGTCTTAC 57.211 33.333 9.40 0.00 33.09 2.34
359 361 9.788960 GAATTTGATCAATAAAGTGGTCTTACC 57.211 33.333 9.40 0.00 39.22 2.85
360 362 7.696992 TTTGATCAATAAAGTGGTCTTACCC 57.303 36.000 9.40 0.00 37.50 3.69
361 363 5.751586 TGATCAATAAAGTGGTCTTACCCC 58.248 41.667 0.00 0.00 37.50 4.95
362 364 5.251932 TGATCAATAAAGTGGTCTTACCCCA 59.748 40.000 0.00 0.00 37.50 4.96
363 365 5.789574 TCAATAAAGTGGTCTTACCCCAT 57.210 39.130 0.00 0.00 37.50 4.00
364 366 6.894735 TCAATAAAGTGGTCTTACCCCATA 57.105 37.500 0.00 0.00 37.50 2.74
365 367 7.273457 TCAATAAAGTGGTCTTACCCCATAA 57.727 36.000 0.00 0.00 37.50 1.90
366 368 7.700846 TCAATAAAGTGGTCTTACCCCATAAA 58.299 34.615 0.00 0.00 37.50 1.40
367 369 8.171400 TCAATAAAGTGGTCTTACCCCATAAAA 58.829 33.333 0.00 0.00 37.50 1.52
368 370 8.808092 CAATAAAGTGGTCTTACCCCATAAAAA 58.192 33.333 0.00 0.00 37.50 1.94
369 371 6.911250 AAAGTGGTCTTACCCCATAAAAAG 57.089 37.500 0.00 0.00 37.50 2.27
370 372 5.853572 AGTGGTCTTACCCCATAAAAAGA 57.146 39.130 0.00 0.00 37.50 2.52
371 373 6.208840 AGTGGTCTTACCCCATAAAAAGAA 57.791 37.500 0.00 0.00 37.50 2.52
372 374 6.616577 AGTGGTCTTACCCCATAAAAAGAAA 58.383 36.000 0.00 0.00 37.50 2.52
602 612 7.817641 CATCATCTATGGTACGTACTACATGT 58.182 38.462 24.07 2.69 31.38 3.21
684 697 2.493675 TGCTAGATCTACCGATGATGCC 59.506 50.000 0.00 0.00 0.00 4.40
706 719 4.275196 CCTCATGCATGACATCAAAGTAGG 59.725 45.833 25.42 16.23 36.64 3.18
733 905 5.921784 AAATCGTCAACGTATTCTCGTAC 57.078 39.130 2.09 0.00 43.38 3.67
820 1006 0.826715 TATCTGGTGAGGCTGCAGAC 59.173 55.000 20.43 17.00 0.00 3.51
821 1007 2.236223 ATCTGGTGAGGCTGCAGACG 62.236 60.000 20.43 0.00 0.00 4.18
866 1066 6.640160 CGTGCAACTTATTTAACGTTCGACG 61.640 44.000 2.82 5.97 41.00 5.12
885 1097 4.446385 CGACGAGAAACAAAATAGGTGTCA 59.554 41.667 0.00 0.00 0.00 3.58
897 1109 3.006672 GGTGTCAACCAGTGGTCAG 57.993 57.895 17.06 11.82 46.75 3.51
898 1110 0.180406 GGTGTCAACCAGTGGTCAGT 59.820 55.000 17.06 0.00 46.75 3.41
899 1111 1.299541 GTGTCAACCAGTGGTCAGTG 58.700 55.000 17.06 10.87 33.12 3.66
900 1112 1.134521 GTGTCAACCAGTGGTCAGTGA 60.135 52.381 17.06 13.29 33.12 3.41
901 1113 1.134521 TGTCAACCAGTGGTCAGTGAC 60.135 52.381 27.90 27.90 39.82 3.67
902 1114 0.104120 TCAACCAGTGGTCAGTGACG 59.896 55.000 17.06 5.44 33.12 4.35
998 1214 0.396417 AGCTAGCTCCTGATCACCGT 60.396 55.000 12.68 0.00 0.00 4.83
1004 1220 0.531532 CTCCTGATCACCGTCATGGC 60.532 60.000 0.00 0.00 43.94 4.40
1332 1549 1.448540 CTTCGCGGAGTTCATGGCT 60.449 57.895 6.14 0.00 0.00 4.75
1488 1706 2.128771 ACTTCCATTGACCCATTCCG 57.871 50.000 0.00 0.00 0.00 4.30
1489 1707 1.354368 ACTTCCATTGACCCATTCCGT 59.646 47.619 0.00 0.00 0.00 4.69
1490 1708 2.225017 ACTTCCATTGACCCATTCCGTT 60.225 45.455 0.00 0.00 0.00 4.44
1491 1709 2.122783 TCCATTGACCCATTCCGTTC 57.877 50.000 0.00 0.00 0.00 3.95
1494 1712 2.760092 CCATTGACCCATTCCGTTCATT 59.240 45.455 0.00 0.00 0.00 2.57
1515 1747 4.906065 TCAATGCACATCTCAAATAGCC 57.094 40.909 0.00 0.00 0.00 3.93
1722 1963 3.562557 AGCGTTGGTACTTGACGAAAAAT 59.437 39.130 16.36 0.00 38.99 1.82
1983 2224 2.362369 GGAGCAGGTGCAGGAGCTA 61.362 63.158 4.48 0.00 45.16 3.32
2043 2284 3.003173 CTCCGGAAGCCCAGTGGA 61.003 66.667 11.95 0.00 0.00 4.02
2084 2325 2.721167 CCGACATGCTTCCTCCGGA 61.721 63.158 2.93 2.93 39.31 5.14
2504 2803 0.317436 CGATCTCACTGCCGCTACTC 60.317 60.000 0.00 0.00 0.00 2.59
2536 2866 8.888716 ACAATAAGGGAAAATTTTGTGTTTGAC 58.111 29.630 8.47 0.00 0.00 3.18
2565 2913 4.764679 TGCCACAGCTACTGTATTTTTG 57.235 40.909 0.00 0.00 43.43 2.44
2586 2934 5.772825 TGGTTTTTCATTCTGAAGGTGAG 57.227 39.130 1.70 0.00 37.70 3.51
2606 2954 3.477530 AGGAAACACTGAAACTGTAGCC 58.522 45.455 0.00 0.00 0.00 3.93
2620 2968 6.996180 AACTGTAGCCTATGTGGTGTATAT 57.004 37.500 0.00 0.00 38.35 0.86
2638 3180 7.429340 GGTGTATATTTTTCGCTCAGAATTGTG 59.571 37.037 0.00 0.00 38.86 3.33
2639 3181 8.175069 GTGTATATTTTTCGCTCAGAATTGTGA 58.825 33.333 5.05 5.05 38.86 3.58
2649 3191 4.726416 CTCAGAATTGTGAAAATGGTCCG 58.274 43.478 6.75 0.00 0.00 4.79
2652 3194 1.923356 ATTGTGAAAATGGTCCGGCT 58.077 45.000 0.00 0.00 0.00 5.52
2703 3431 1.286501 CATATGTGACGTGGTTCCCG 58.713 55.000 0.00 0.00 0.00 5.14
2704 3432 0.177141 ATATGTGACGTGGTTCCCGG 59.823 55.000 0.00 0.00 0.00 5.73
2705 3433 1.890625 TATGTGACGTGGTTCCCGGG 61.891 60.000 16.85 16.85 0.00 5.73
2706 3434 4.692475 GTGACGTGGTTCCCGGGG 62.692 72.222 23.50 6.77 0.00 5.73
2708 3436 3.628982 GACGTGGTTCCCGGGGAA 61.629 66.667 24.64 24.64 39.66 3.97
2709 3437 2.931649 ACGTGGTTCCCGGGGAAT 60.932 61.111 30.20 12.32 44.04 3.01
2710 3438 2.353573 CGTGGTTCCCGGGGAATT 59.646 61.111 30.20 0.00 44.04 2.17
2711 3439 1.303806 CGTGGTTCCCGGGGAATTT 60.304 57.895 30.20 0.00 44.04 1.82
2712 3440 1.310216 CGTGGTTCCCGGGGAATTTC 61.310 60.000 30.20 21.58 44.04 2.17
2713 3441 0.039180 GTGGTTCCCGGGGAATTTCT 59.961 55.000 30.20 0.00 44.04 2.52
2714 3442 0.781278 TGGTTCCCGGGGAATTTCTT 59.219 50.000 30.20 0.00 44.04 2.52
2715 3443 1.182667 GGTTCCCGGGGAATTTCTTG 58.817 55.000 30.20 0.00 44.04 3.02
2717 3445 0.113385 TTCCCGGGGAATTTCTTGCA 59.887 50.000 24.64 0.00 36.71 4.08
2718 3446 0.610785 TCCCGGGGAATTTCTTGCAC 60.611 55.000 23.50 0.00 0.00 4.57
2720 3448 0.243636 CCGGGGAATTTCTTGCACAC 59.756 55.000 0.00 0.00 0.00 3.82
2722 3450 0.608130 GGGGAATTTCTTGCACACCC 59.392 55.000 0.00 0.00 35.60 4.61
2723 3451 0.243636 GGGAATTTCTTGCACACCCG 59.756 55.000 0.00 0.00 0.00 5.28
2724 3452 1.243902 GGAATTTCTTGCACACCCGA 58.756 50.000 0.00 0.00 0.00 5.14
2726 3454 2.231235 GGAATTTCTTGCACACCCGATT 59.769 45.455 0.00 0.00 0.00 3.34
2727 3455 3.306019 GGAATTTCTTGCACACCCGATTT 60.306 43.478 0.00 0.00 0.00 2.17
2728 3456 4.082463 GGAATTTCTTGCACACCCGATTTA 60.082 41.667 0.00 0.00 0.00 1.40
2729 3457 4.701956 ATTTCTTGCACACCCGATTTAG 57.298 40.909 0.00 0.00 0.00 1.85
2730 3458 2.851263 TCTTGCACACCCGATTTAGT 57.149 45.000 0.00 0.00 0.00 2.24
2733 3461 4.643463 TCTTGCACACCCGATTTAGTTAA 58.357 39.130 0.00 0.00 0.00 2.01
2734 3462 4.453136 TCTTGCACACCCGATTTAGTTAAC 59.547 41.667 0.00 0.00 0.00 2.01
2735 3463 3.075884 TGCACACCCGATTTAGTTAACC 58.924 45.455 0.88 0.00 0.00 2.85
2736 3464 3.244630 TGCACACCCGATTTAGTTAACCT 60.245 43.478 0.88 0.00 0.00 3.50
2759 3487 2.229792 GAGCAACCCATCAAAGTGTCA 58.770 47.619 0.00 0.00 0.00 3.58
2779 3621 0.946221 GACGAGTGTGCTGAACTGGG 60.946 60.000 0.00 0.00 0.00 4.45
2790 3632 3.500680 TGCTGAACTGGGTTTTCGATAAC 59.499 43.478 9.93 9.93 0.00 1.89
2873 3715 1.027357 GGCAGCATGACTACAATGGG 58.973 55.000 0.00 0.00 44.72 4.00
2890 3732 1.133699 TGGGCATAGGCAAGATCAAGG 60.134 52.381 0.15 0.00 43.71 3.61
2898 3740 0.953727 GCAAGATCAAGGCACACACA 59.046 50.000 0.00 0.00 0.00 3.72
2923 3765 9.631452 CAAAAGAAGATAGAAGGGAAAAATCAC 57.369 33.333 0.00 0.00 0.00 3.06
2924 3766 8.940397 AAAGAAGATAGAAGGGAAAAATCACA 57.060 30.769 0.00 0.00 0.00 3.58
2925 3767 8.572855 AAGAAGATAGAAGGGAAAAATCACAG 57.427 34.615 0.00 0.00 0.00 3.66
2926 3768 7.694093 AGAAGATAGAAGGGAAAAATCACAGT 58.306 34.615 0.00 0.00 0.00 3.55
2927 3769 8.166726 AGAAGATAGAAGGGAAAAATCACAGTT 58.833 33.333 0.00 0.00 0.00 3.16
2928 3770 8.712228 AAGATAGAAGGGAAAAATCACAGTTT 57.288 30.769 0.00 0.00 0.00 2.66
2929 3771 9.807921 AAGATAGAAGGGAAAAATCACAGTTTA 57.192 29.630 0.00 0.00 0.00 2.01
2930 3772 9.454859 AGATAGAAGGGAAAAATCACAGTTTAG 57.545 33.333 0.00 0.00 0.00 1.85
2931 3773 9.449719 GATAGAAGGGAAAAATCACAGTTTAGA 57.550 33.333 0.00 0.00 0.00 2.10
2932 3774 7.751768 AGAAGGGAAAAATCACAGTTTAGAG 57.248 36.000 0.00 0.00 0.00 2.43
2933 3775 6.717084 AGAAGGGAAAAATCACAGTTTAGAGG 59.283 38.462 0.00 0.00 0.00 3.69
2934 3776 5.325239 AGGGAAAAATCACAGTTTAGAGGG 58.675 41.667 0.00 0.00 0.00 4.30
2935 3777 5.074515 AGGGAAAAATCACAGTTTAGAGGGA 59.925 40.000 0.00 0.00 0.00 4.20
2936 3778 5.416013 GGGAAAAATCACAGTTTAGAGGGAG 59.584 44.000 0.00 0.00 0.00 4.30
2937 3779 5.416013 GGAAAAATCACAGTTTAGAGGGAGG 59.584 44.000 0.00 0.00 0.00 4.30
2938 3780 4.576330 AAATCACAGTTTAGAGGGAGGG 57.424 45.455 0.00 0.00 0.00 4.30
2939 3781 1.952621 TCACAGTTTAGAGGGAGGGG 58.047 55.000 0.00 0.00 0.00 4.79
2940 3782 1.435563 TCACAGTTTAGAGGGAGGGGA 59.564 52.381 0.00 0.00 0.00 4.81
2941 3783 2.158066 TCACAGTTTAGAGGGAGGGGAA 60.158 50.000 0.00 0.00 0.00 3.97
2942 3784 2.846827 CACAGTTTAGAGGGAGGGGAAT 59.153 50.000 0.00 0.00 0.00 3.01
2943 3785 3.267031 CACAGTTTAGAGGGAGGGGAATT 59.733 47.826 0.00 0.00 0.00 2.17
2944 3786 3.923425 ACAGTTTAGAGGGAGGGGAATTT 59.077 43.478 0.00 0.00 0.00 1.82
2945 3787 4.357097 ACAGTTTAGAGGGAGGGGAATTTT 59.643 41.667 0.00 0.00 0.00 1.82
2946 3788 5.162870 ACAGTTTAGAGGGAGGGGAATTTTT 60.163 40.000 0.00 0.00 0.00 1.94
2947 3789 5.185828 CAGTTTAGAGGGAGGGGAATTTTTG 59.814 44.000 0.00 0.00 0.00 2.44
2948 3790 2.928036 AGAGGGAGGGGAATTTTTGG 57.072 50.000 0.00 0.00 0.00 3.28
2949 3791 2.081855 AGAGGGAGGGGAATTTTTGGT 58.918 47.619 0.00 0.00 0.00 3.67
2950 3792 2.043115 AGAGGGAGGGGAATTTTTGGTC 59.957 50.000 0.00 0.00 0.00 4.02
2951 3793 2.043115 GAGGGAGGGGAATTTTTGGTCT 59.957 50.000 0.00 0.00 0.00 3.85
2952 3794 3.268595 GAGGGAGGGGAATTTTTGGTCTA 59.731 47.826 0.00 0.00 0.00 2.59
2953 3795 3.864770 AGGGAGGGGAATTTTTGGTCTAT 59.135 43.478 0.00 0.00 0.00 1.98
2954 3796 3.960755 GGGAGGGGAATTTTTGGTCTATG 59.039 47.826 0.00 0.00 0.00 2.23
2955 3797 3.960755 GGAGGGGAATTTTTGGTCTATGG 59.039 47.826 0.00 0.00 0.00 2.74
2956 3798 3.960755 GAGGGGAATTTTTGGTCTATGGG 59.039 47.826 0.00 0.00 0.00 4.00
2957 3799 3.600617 AGGGGAATTTTTGGTCTATGGGA 59.399 43.478 0.00 0.00 0.00 4.37
2958 3800 4.046618 AGGGGAATTTTTGGTCTATGGGAA 59.953 41.667 0.00 0.00 0.00 3.97
2959 3801 4.161565 GGGGAATTTTTGGTCTATGGGAAC 59.838 45.833 0.00 0.00 0.00 3.62
2975 3817 5.178096 TGGGAACATATGCACCCTATATG 57.822 43.478 27.15 6.11 42.49 1.78
2976 3818 4.018506 TGGGAACATATGCACCCTATATGG 60.019 45.833 27.15 0.00 40.92 2.74
2977 3819 4.227300 GGGAACATATGCACCCTATATGGA 59.773 45.833 22.82 0.00 40.92 3.41
2978 3820 5.280985 GGGAACATATGCACCCTATATGGAA 60.281 44.000 22.82 0.00 40.92 3.53
2979 3821 6.245408 GGAACATATGCACCCTATATGGAAA 58.755 40.000 1.58 0.00 40.92 3.13
2980 3822 6.719370 GGAACATATGCACCCTATATGGAAAA 59.281 38.462 1.58 0.00 40.92 2.29
2981 3823 7.232534 GGAACATATGCACCCTATATGGAAAAA 59.767 37.037 1.58 0.00 40.92 1.94
3013 3855 9.843874 GTAATTCAACAAAAAGTCGAAAATTCC 57.156 29.630 0.00 0.00 0.00 3.01
3014 3856 8.716646 AATTCAACAAAAAGTCGAAAATTCCT 57.283 26.923 0.00 0.00 0.00 3.36
3015 3857 7.518731 TTCAACAAAAAGTCGAAAATTCCTG 57.481 32.000 0.00 0.00 0.00 3.86
3016 3858 6.857956 TCAACAAAAAGTCGAAAATTCCTGA 58.142 32.000 0.00 0.00 0.00 3.86
3017 3859 7.316640 TCAACAAAAAGTCGAAAATTCCTGAA 58.683 30.769 0.00 0.00 0.00 3.02
3018 3860 7.815068 TCAACAAAAAGTCGAAAATTCCTGAAA 59.185 29.630 0.00 0.00 0.00 2.69
3019 3861 8.603181 CAACAAAAAGTCGAAAATTCCTGAAAT 58.397 29.630 0.00 0.00 0.00 2.17
3020 3862 8.716646 ACAAAAAGTCGAAAATTCCTGAAATT 57.283 26.923 0.00 0.00 39.30 1.82
3021 3863 9.810545 ACAAAAAGTCGAAAATTCCTGAAATTA 57.189 25.926 0.00 0.00 36.54 1.40
3056 3898 9.939802 ATAAACTTGACCTTCTATTTTACTCGT 57.060 29.630 0.00 0.00 0.00 4.18
3057 3899 7.653767 AACTTGACCTTCTATTTTACTCGTG 57.346 36.000 0.00 0.00 0.00 4.35
3058 3900 6.989659 ACTTGACCTTCTATTTTACTCGTGA 58.010 36.000 0.00 0.00 0.00 4.35
3059 3901 7.091443 ACTTGACCTTCTATTTTACTCGTGAG 58.909 38.462 0.00 0.00 0.00 3.51
3060 3902 6.829229 TGACCTTCTATTTTACTCGTGAGA 57.171 37.500 3.44 0.00 39.12 3.27
3061 3903 7.223260 TGACCTTCTATTTTACTCGTGAGAA 57.777 36.000 3.44 0.00 41.32 2.87
3062 3904 7.663827 TGACCTTCTATTTTACTCGTGAGAAA 58.336 34.615 3.44 0.00 41.32 2.52
3063 3905 8.311836 TGACCTTCTATTTTACTCGTGAGAAAT 58.688 33.333 3.44 3.24 41.32 2.17
3064 3906 9.798994 GACCTTCTATTTTACTCGTGAGAAATA 57.201 33.333 3.44 4.18 41.32 1.40
3073 3915 8.610248 TTTACTCGTGAGAAATAAAATCCACA 57.390 30.769 3.44 0.00 41.32 4.17
3074 3916 8.610248 TTACTCGTGAGAAATAAAATCCACAA 57.390 30.769 3.44 0.00 41.32 3.33
3075 3917 7.504924 ACTCGTGAGAAATAAAATCCACAAA 57.495 32.000 3.44 0.00 41.32 2.83
3076 3918 7.936584 ACTCGTGAGAAATAAAATCCACAAAA 58.063 30.769 3.44 0.00 41.32 2.44
3077 3919 8.410141 ACTCGTGAGAAATAAAATCCACAAAAA 58.590 29.630 3.44 0.00 41.32 1.94
3142 3984 7.509318 TGGCTAATATAGTGTGAATAGTGACCT 59.491 37.037 0.00 0.00 0.00 3.85
3143 3985 9.021807 GGCTAATATAGTGTGAATAGTGACCTA 57.978 37.037 0.00 0.00 0.00 3.08
3152 3994 8.924303 AGTGTGAATAGTGACCTATAATAGCAA 58.076 33.333 0.00 0.00 32.57 3.91
3190 4362 2.722094 TGCTGTGAGGTCAACTTTTGT 58.278 42.857 0.00 0.00 0.00 2.83
3195 4367 6.127479 TGCTGTGAGGTCAACTTTTGTTATTT 60.127 34.615 0.00 0.00 41.35 1.40
3196 4368 6.756542 GCTGTGAGGTCAACTTTTGTTATTTT 59.243 34.615 0.00 0.00 41.35 1.82
3222 4394 8.945758 TTTCGTCGAGATTTATATACTAGTGC 57.054 34.615 5.39 0.00 0.00 4.40
3224 4396 8.091385 TCGTCGAGATTTATATACTAGTGCAA 57.909 34.615 5.39 0.00 0.00 4.08
3225 4397 8.562052 TCGTCGAGATTTATATACTAGTGCAAA 58.438 33.333 5.39 0.89 0.00 3.68
3238 4410 6.604735 ACTAGTGCAAAAGTAAGTCAAGTG 57.395 37.500 0.00 0.00 0.00 3.16
3239 4411 6.113411 ACTAGTGCAAAAGTAAGTCAAGTGT 58.887 36.000 0.00 0.00 0.00 3.55
3240 4412 5.897377 AGTGCAAAAGTAAGTCAAGTGTT 57.103 34.783 0.00 0.00 0.00 3.32
3241 4413 6.267496 AGTGCAAAAGTAAGTCAAGTGTTT 57.733 33.333 0.00 0.00 0.00 2.83
3242 4414 6.687604 AGTGCAAAAGTAAGTCAAGTGTTTT 58.312 32.000 0.00 0.00 0.00 2.43
3243 4415 6.586082 AGTGCAAAAGTAAGTCAAGTGTTTTG 59.414 34.615 0.00 0.00 37.74 2.44
3246 4418 8.082852 TGCAAAAGTAAGTCAAGTGTTTTGTTA 58.917 29.630 0.00 0.00 37.26 2.41
3325 4625 4.632538 GGTGCATATACAACCAAGAACC 57.367 45.455 0.00 0.00 0.00 3.62
3326 4626 4.013728 GGTGCATATACAACCAAGAACCA 58.986 43.478 0.00 0.00 0.00 3.67
3327 4627 4.461081 GGTGCATATACAACCAAGAACCAA 59.539 41.667 0.00 0.00 0.00 3.67
3329 4629 6.092748 GTGCATATACAACCAAGAACCAAAG 58.907 40.000 0.00 0.00 0.00 2.77
3330 4630 5.772672 TGCATATACAACCAAGAACCAAAGT 59.227 36.000 0.00 0.00 0.00 2.66
3331 4631 6.092748 GCATATACAACCAAGAACCAAAGTG 58.907 40.000 0.00 0.00 0.00 3.16
3333 4633 7.094549 GCATATACAACCAAGAACCAAAGTGTA 60.095 37.037 0.00 0.00 0.00 2.90
3334 4634 8.956426 CATATACAACCAAGAACCAAAGTGTAT 58.044 33.333 0.00 0.00 0.00 2.29
3337 4637 6.569780 ACAACCAAGAACCAAAGTGTATTTC 58.430 36.000 0.00 0.00 0.00 2.17
3339 4639 4.587262 ACCAAGAACCAAAGTGTATTTCCC 59.413 41.667 0.00 0.00 0.00 3.97
3340 4640 4.021456 CCAAGAACCAAAGTGTATTTCCCC 60.021 45.833 0.00 0.00 0.00 4.81
3341 4641 4.463050 AGAACCAAAGTGTATTTCCCCA 57.537 40.909 0.00 0.00 0.00 4.96
3342 4642 4.407365 AGAACCAAAGTGTATTTCCCCAG 58.593 43.478 0.00 0.00 0.00 4.45
3343 4643 3.895704 ACCAAAGTGTATTTCCCCAGT 57.104 42.857 0.00 0.00 0.00 4.00
3344 4644 4.193240 ACCAAAGTGTATTTCCCCAGTT 57.807 40.909 0.00 0.00 0.00 3.16
3345 4645 4.552674 ACCAAAGTGTATTTCCCCAGTTT 58.447 39.130 0.00 0.00 35.22 2.66
3346 4646 5.707495 ACCAAAGTGTATTTCCCCAGTTTA 58.293 37.500 0.00 0.00 33.59 2.01
3347 4647 5.773176 ACCAAAGTGTATTTCCCCAGTTTAG 59.227 40.000 0.00 0.00 33.59 1.85
3349 4649 6.151144 CCAAAGTGTATTTCCCCAGTTTAGAG 59.849 42.308 0.00 0.00 33.59 2.43
3350 4650 6.697641 AAGTGTATTTCCCCAGTTTAGAGA 57.302 37.500 0.00 0.00 0.00 3.10
3351 4651 6.301169 AGTGTATTTCCCCAGTTTAGAGAG 57.699 41.667 0.00 0.00 0.00 3.20
3352 4652 6.023603 AGTGTATTTCCCCAGTTTAGAGAGA 58.976 40.000 0.00 0.00 0.00 3.10
3353 4653 6.070710 AGTGTATTTCCCCAGTTTAGAGAGAC 60.071 42.308 0.00 0.00 0.00 3.36
3354 4654 6.023603 TGTATTTCCCCAGTTTAGAGAGACT 58.976 40.000 0.00 0.00 0.00 3.24
3356 4656 7.844779 TGTATTTCCCCAGTTTAGAGAGACTAT 59.155 37.037 0.00 0.00 0.00 2.12
3357 4657 6.793505 TTTCCCCAGTTTAGAGAGACTATC 57.206 41.667 0.00 0.00 0.00 2.08
3358 4658 5.735733 TCCCCAGTTTAGAGAGACTATCT 57.264 43.478 4.76 4.76 42.61 1.98
3359 4659 6.093617 TCCCCAGTTTAGAGAGACTATCTT 57.906 41.667 4.66 0.00 38.84 2.40
3363 5044 7.342284 CCCCAGTTTAGAGAGACTATCTTTGTA 59.658 40.741 4.66 0.00 38.84 2.41
3385 5066 8.942338 TGTATTTTTGACAATCTATAGCTCGT 57.058 30.769 0.00 0.00 0.00 4.18
3390 5071 8.766000 TTTTGACAATCTATAGCTCGTACAAA 57.234 30.769 0.00 0.00 0.00 2.83
3391 5072 7.987268 TTGACAATCTATAGCTCGTACAAAG 57.013 36.000 0.00 0.00 0.00 2.77
3392 5073 7.096884 TGACAATCTATAGCTCGTACAAAGT 57.903 36.000 0.00 0.00 0.00 2.66
3393 5074 7.194278 TGACAATCTATAGCTCGTACAAAGTC 58.806 38.462 0.00 0.00 0.00 3.01
3394 5075 7.096884 ACAATCTATAGCTCGTACAAAGTCA 57.903 36.000 0.00 0.00 0.00 3.41
3395 5076 7.544622 ACAATCTATAGCTCGTACAAAGTCAA 58.455 34.615 0.00 0.00 0.00 3.18
3396 5077 8.033038 ACAATCTATAGCTCGTACAAAGTCAAA 58.967 33.333 0.00 0.00 0.00 2.69
3397 5078 8.535592 CAATCTATAGCTCGTACAAAGTCAAAG 58.464 37.037 0.00 0.00 0.00 2.77
3399 5080 3.470645 AGCTCGTACAAAGTCAAAGGT 57.529 42.857 0.00 0.00 0.00 3.50
3401 5082 3.560068 AGCTCGTACAAAGTCAAAGGTTG 59.440 43.478 0.00 0.00 0.00 3.77
3403 5084 4.124238 CTCGTACAAAGTCAAAGGTTGGA 58.876 43.478 0.00 0.00 0.00 3.53
3405 5086 4.753107 TCGTACAAAGTCAAAGGTTGGATC 59.247 41.667 0.00 0.00 0.00 3.36
3406 5087 4.513692 CGTACAAAGTCAAAGGTTGGATCA 59.486 41.667 0.00 0.00 0.00 2.92
3407 5088 5.008217 CGTACAAAGTCAAAGGTTGGATCAA 59.992 40.000 0.00 0.00 0.00 2.57
3412 5093 7.495606 ACAAAGTCAAAGGTTGGATCAAATTTC 59.504 33.333 0.00 0.00 0.00 2.17
3413 5094 6.101650 AGTCAAAGGTTGGATCAAATTTCC 57.898 37.500 0.00 0.00 0.00 3.13
3414 5095 5.840693 AGTCAAAGGTTGGATCAAATTTCCT 59.159 36.000 0.00 0.00 34.17 3.36
3415 5096 6.327365 AGTCAAAGGTTGGATCAAATTTCCTT 59.673 34.615 0.00 0.00 30.74 3.36
3416 5097 7.508977 AGTCAAAGGTTGGATCAAATTTCCTTA 59.491 33.333 4.13 0.00 29.82 2.69
3418 5099 7.728083 TCAAAGGTTGGATCAAATTTCCTTAGA 59.272 33.333 4.13 0.00 29.82 2.10
3419 5100 7.709149 AAGGTTGGATCAAATTTCCTTAGAG 57.291 36.000 2.10 0.00 34.17 2.43
3420 5101 5.654209 AGGTTGGATCAAATTTCCTTAGAGC 59.346 40.000 0.00 0.00 34.17 4.09
3421 5102 5.418840 GGTTGGATCAAATTTCCTTAGAGCA 59.581 40.000 0.00 0.00 34.17 4.26
3422 5103 6.097412 GGTTGGATCAAATTTCCTTAGAGCAT 59.903 38.462 0.00 0.00 34.17 3.79
3423 5104 6.704289 TGGATCAAATTTCCTTAGAGCATG 57.296 37.500 0.00 0.00 34.17 4.06
3424 5105 5.595542 TGGATCAAATTTCCTTAGAGCATGG 59.404 40.000 0.00 0.00 34.17 3.66
3426 5107 6.097412 GGATCAAATTTCCTTAGAGCATGGTT 59.903 38.462 0.00 0.00 0.00 3.67
3428 5109 8.593945 ATCAAATTTCCTTAGAGCATGGTTAA 57.406 30.769 0.00 0.00 0.00 2.01
3429 5110 8.593945 TCAAATTTCCTTAGAGCATGGTTAAT 57.406 30.769 0.00 0.00 0.00 1.40
3430 5111 9.693739 TCAAATTTCCTTAGAGCATGGTTAATA 57.306 29.630 0.00 0.00 0.00 0.98
3431 5112 9.956720 CAAATTTCCTTAGAGCATGGTTAATAG 57.043 33.333 0.00 0.00 0.00 1.73
3443 5124 9.197694 GAGCATGGTTAATAGTATAGTCAACAG 57.802 37.037 0.00 0.00 0.00 3.16
3444 5125 7.657761 AGCATGGTTAATAGTATAGTCAACAGC 59.342 37.037 0.00 0.00 0.00 4.40
3445 5126 7.095187 GCATGGTTAATAGTATAGTCAACAGCC 60.095 40.741 0.00 0.00 0.00 4.85
3447 5526 5.924825 GGTTAATAGTATAGTCAACAGCCGG 59.075 44.000 0.00 0.00 0.00 6.13
3449 5528 1.486211 AGTATAGTCAACAGCCGGCT 58.514 50.000 27.08 27.08 0.00 5.52
3451 5530 3.231818 AGTATAGTCAACAGCCGGCTAT 58.768 45.455 32.30 17.99 0.00 2.97
3455 5534 2.039418 AGTCAACAGCCGGCTATATGA 58.961 47.619 32.30 28.09 0.00 2.15
3457 5536 2.802816 GTCAACAGCCGGCTATATGAAG 59.197 50.000 32.30 17.86 0.00 3.02
3461 5540 1.532868 CAGCCGGCTATATGAAGTTGC 59.467 52.381 32.30 0.00 0.00 4.17
3464 5543 2.287009 GCCGGCTATATGAAGTTGCAAC 60.287 50.000 22.15 22.17 0.00 4.17
3465 5544 2.290641 CCGGCTATATGAAGTTGCAACC 59.709 50.000 25.62 12.17 0.00 3.77
3467 5546 3.248602 CGGCTATATGAAGTTGCAACCTC 59.751 47.826 25.62 22.26 0.00 3.85
3469 5548 4.035675 GGCTATATGAAGTTGCAACCTCAC 59.964 45.833 28.48 17.11 32.64 3.51
3472 5551 6.483307 GCTATATGAAGTTGCAACCTCACATA 59.517 38.462 28.48 24.87 32.64 2.29
3474 5553 9.710900 CTATATGAAGTTGCAACCTCACATATA 57.289 33.333 28.48 28.48 32.64 0.86
3476 5555 5.804639 TGAAGTTGCAACCTCACATATAGT 58.195 37.500 23.77 0.43 0.00 2.12
3479 5558 7.880713 TGAAGTTGCAACCTCACATATAGTTAA 59.119 33.333 23.77 0.35 0.00 2.01
3482 5561 8.267894 AGTTGCAACCTCACATATAGTTAATCT 58.732 33.333 25.62 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
6 7 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
7 8 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
8 9 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
9 10 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
10 11 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
11 12 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
12 13 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
13 14 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
14 15 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
15 16 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
16 17 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
27 28 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
28 29 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
29 30 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
30 31 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
31 32 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
32 33 4.568152 ATTTATTTCAGGATTTCCGGCG 57.432 40.909 0.00 0.00 42.08 6.46
33 34 5.901552 TGAATTTATTTCAGGATTTCCGGC 58.098 37.500 0.00 0.00 39.44 6.13
44 45 7.862372 GCTCGCATTATTCCTGAATTTATTTCA 59.138 33.333 0.00 0.00 42.09 2.69
45 46 7.862372 TGCTCGCATTATTCCTGAATTTATTTC 59.138 33.333 0.00 0.00 34.72 2.17
46 47 7.649306 GTGCTCGCATTATTCCTGAATTTATTT 59.351 33.333 0.00 0.00 32.50 1.40
47 48 7.141363 GTGCTCGCATTATTCCTGAATTTATT 58.859 34.615 0.00 0.00 32.50 1.40
48 49 6.294176 GGTGCTCGCATTATTCCTGAATTTAT 60.294 38.462 0.00 0.00 32.50 1.40
49 50 5.008613 GGTGCTCGCATTATTCCTGAATTTA 59.991 40.000 0.00 0.00 32.50 1.40
50 51 4.202050 GGTGCTCGCATTATTCCTGAATTT 60.202 41.667 0.00 0.00 32.50 1.82
51 52 3.316308 GGTGCTCGCATTATTCCTGAATT 59.684 43.478 0.00 0.00 32.50 2.17
52 53 2.880890 GGTGCTCGCATTATTCCTGAAT 59.119 45.455 0.00 0.00 34.93 2.57
53 54 2.288666 GGTGCTCGCATTATTCCTGAA 58.711 47.619 0.00 0.00 0.00 3.02
54 55 1.209261 TGGTGCTCGCATTATTCCTGA 59.791 47.619 0.00 0.00 0.00 3.86
55 56 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
56 57 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
57 58 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
58 59 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
59 60 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
60 61 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
61 62 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
62 63 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
63 64 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
64 65 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
65 66 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
66 67 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
67 68 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
68 69 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
69 70 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
85 86 1.613061 GTATCCCCAACCCACCAGG 59.387 63.158 0.00 0.00 43.78 4.45
86 87 1.211567 TGGTATCCCCAACCCACCAG 61.212 60.000 0.00 0.00 41.50 4.00
87 88 1.151565 TGGTATCCCCAACCCACCA 60.152 57.895 0.00 0.00 41.50 4.17
88 89 3.844063 TGGTATCCCCAACCCACC 58.156 61.111 0.00 0.00 41.50 4.61
95 96 1.009552 AGATGGACAGTGGTATCCCCA 59.990 52.381 0.00 0.00 42.51 4.96
96 97 1.417890 CAGATGGACAGTGGTATCCCC 59.582 57.143 0.00 0.00 33.69 4.81
97 98 2.398588 TCAGATGGACAGTGGTATCCC 58.601 52.381 0.00 0.00 33.69 3.85
98 99 3.389329 ACATCAGATGGACAGTGGTATCC 59.611 47.826 15.13 0.00 35.37 2.59
99 100 4.141846 ACACATCAGATGGACAGTGGTATC 60.142 45.833 15.13 0.00 38.52 2.24
100 101 3.776969 ACACATCAGATGGACAGTGGTAT 59.223 43.478 15.13 0.00 38.52 2.73
101 102 3.173151 ACACATCAGATGGACAGTGGTA 58.827 45.455 15.13 0.00 38.52 3.25
102 103 1.980765 ACACATCAGATGGACAGTGGT 59.019 47.619 15.13 0.00 38.52 4.16
103 104 2.745821 CAACACATCAGATGGACAGTGG 59.254 50.000 15.13 2.12 38.52 4.00
104 105 3.434641 GTCAACACATCAGATGGACAGTG 59.565 47.826 15.13 5.95 39.51 3.66
105 106 3.668447 GTCAACACATCAGATGGACAGT 58.332 45.455 15.13 5.02 33.60 3.55
106 107 2.669924 CGTCAACACATCAGATGGACAG 59.330 50.000 15.13 4.42 33.60 3.51
107 108 2.612721 CCGTCAACACATCAGATGGACA 60.613 50.000 15.13 0.00 40.16 4.02
108 109 2.002586 CCGTCAACACATCAGATGGAC 58.997 52.381 15.13 10.61 40.16 4.02
109 110 1.066215 CCCGTCAACACATCAGATGGA 60.066 52.381 15.13 0.00 40.16 3.41
110 111 1.372582 CCCGTCAACACATCAGATGG 58.627 55.000 15.13 6.37 38.02 3.51
111 112 1.066215 TCCCCGTCAACACATCAGATG 60.066 52.381 9.03 9.03 0.00 2.90
112 113 1.208052 CTCCCCGTCAACACATCAGAT 59.792 52.381 0.00 0.00 0.00 2.90
113 114 0.608130 CTCCCCGTCAACACATCAGA 59.392 55.000 0.00 0.00 0.00 3.27
114 115 0.321671 ACTCCCCGTCAACACATCAG 59.678 55.000 0.00 0.00 0.00 2.90
115 116 0.034756 CACTCCCCGTCAACACATCA 59.965 55.000 0.00 0.00 0.00 3.07
116 117 1.298859 GCACTCCCCGTCAACACATC 61.299 60.000 0.00 0.00 0.00 3.06
122 123 3.950794 GATGCGCACTCCCCGTCAA 62.951 63.158 14.90 0.00 0.00 3.18
123 124 4.451150 GATGCGCACTCCCCGTCA 62.451 66.667 14.90 0.00 0.00 4.35
126 127 4.552365 ATGGATGCGCACTCCCCG 62.552 66.667 25.94 0.00 31.32 5.73
169 170 5.866335 ACGCCACTATTTCGTTTGATTTA 57.134 34.783 0.00 0.00 31.89 1.40
179 180 1.268032 CCGATGCAACGCCACTATTTC 60.268 52.381 11.32 0.00 0.00 2.17
186 187 2.749706 TAAACCCCGATGCAACGCCA 62.750 55.000 11.32 0.00 0.00 5.69
187 188 1.381165 ATAAACCCCGATGCAACGCC 61.381 55.000 11.32 0.00 0.00 5.68
188 189 1.301423 TATAAACCCCGATGCAACGC 58.699 50.000 11.32 0.00 0.00 4.84
189 190 2.289547 CCTTATAAACCCCGATGCAACG 59.710 50.000 9.71 9.71 0.00 4.10
193 194 1.244816 GGCCTTATAAACCCCGATGC 58.755 55.000 0.00 0.00 0.00 3.91
197 198 1.213430 TCTTGGGCCTTATAAACCCCG 59.787 52.381 16.95 10.33 43.54 5.73
198 199 3.612795 ATCTTGGGCCTTATAAACCCC 57.387 47.619 16.95 14.25 43.54 4.95
199 200 5.262009 GGATATCTTGGGCCTTATAAACCC 58.738 45.833 14.01 14.01 44.52 4.11
206 207 2.158219 TCTCCGGATATCTTGGGCCTTA 60.158 50.000 3.57 0.00 0.00 2.69
211 212 1.694150 TGCTTCTCCGGATATCTTGGG 59.306 52.381 3.57 7.82 0.00 4.12
215 216 5.141182 TCTTAAGTGCTTCTCCGGATATCT 58.859 41.667 3.57 0.00 0.00 1.98
219 220 4.762289 AATCTTAAGTGCTTCTCCGGAT 57.238 40.909 3.57 0.00 0.00 4.18
220 221 4.954202 TCTAATCTTAAGTGCTTCTCCGGA 59.046 41.667 2.93 2.93 0.00 5.14
252 253 3.119029 GCACATTGTTTAGCCCATGTCAT 60.119 43.478 0.00 0.00 0.00 3.06
253 254 2.230992 GCACATTGTTTAGCCCATGTCA 59.769 45.455 0.00 0.00 0.00 3.58
254 255 2.493278 AGCACATTGTTTAGCCCATGTC 59.507 45.455 0.00 0.00 0.00 3.06
255 256 2.231964 CAGCACATTGTTTAGCCCATGT 59.768 45.455 0.00 0.00 0.00 3.21
276 277 0.807496 GAGATCAGTGTTTGCAGGGC 59.193 55.000 0.00 0.00 0.00 5.19
284 285 3.498774 AGGTGCTTTGAGATCAGTGTT 57.501 42.857 0.00 0.00 0.00 3.32
289 290 2.555227 GGGGAAAGGTGCTTTGAGATCA 60.555 50.000 0.00 0.00 33.49 2.92
301 303 2.042569 GGGATACAAACTGGGGAAAGGT 59.957 50.000 0.00 0.00 39.74 3.50
302 304 2.042433 TGGGATACAAACTGGGGAAAGG 59.958 50.000 0.00 0.00 39.74 3.11
303 305 3.089284 GTGGGATACAAACTGGGGAAAG 58.911 50.000 0.00 0.00 39.74 2.62
304 306 2.225167 GGTGGGATACAAACTGGGGAAA 60.225 50.000 0.00 0.00 39.74 3.13
305 307 1.356398 GGTGGGATACAAACTGGGGAA 59.644 52.381 0.00 0.00 39.74 3.97
306 308 0.996583 GGTGGGATACAAACTGGGGA 59.003 55.000 0.00 0.00 39.74 4.81
307 309 0.999712 AGGTGGGATACAAACTGGGG 59.000 55.000 0.00 0.00 39.74 4.96
308 310 2.899303 AAGGTGGGATACAAACTGGG 57.101 50.000 0.00 0.00 39.74 4.45
309 311 4.640201 CACATAAGGTGGGATACAAACTGG 59.360 45.833 0.00 0.00 44.04 4.00
310 312 5.818136 CACATAAGGTGGGATACAAACTG 57.182 43.478 0.00 0.00 44.04 3.16
327 329 9.253832 ACCACTTTATTGATCAAATTCCACATA 57.746 29.630 13.09 0.00 0.00 2.29
328 330 8.137745 ACCACTTTATTGATCAAATTCCACAT 57.862 30.769 13.09 0.00 0.00 3.21
329 331 7.451255 AGACCACTTTATTGATCAAATTCCACA 59.549 33.333 13.09 0.00 0.00 4.17
330 332 7.830739 AGACCACTTTATTGATCAAATTCCAC 58.169 34.615 13.09 0.00 0.00 4.02
331 333 8.421249 AAGACCACTTTATTGATCAAATTCCA 57.579 30.769 13.09 0.00 31.71 3.53
332 334 9.788960 GTAAGACCACTTTATTGATCAAATTCC 57.211 33.333 13.09 0.00 37.53 3.01
333 335 9.788960 GGTAAGACCACTTTATTGATCAAATTC 57.211 33.333 13.09 0.82 38.42 2.17
334 336 8.749354 GGGTAAGACCACTTTATTGATCAAATT 58.251 33.333 13.09 0.00 41.02 1.82
335 337 7.342026 GGGGTAAGACCACTTTATTGATCAAAT 59.658 37.037 13.09 4.08 39.07 2.32
336 338 6.661805 GGGGTAAGACCACTTTATTGATCAAA 59.338 38.462 13.09 0.00 39.07 2.69
337 339 6.184789 GGGGTAAGACCACTTTATTGATCAA 58.815 40.000 11.26 11.26 39.07 2.57
338 340 5.251932 TGGGGTAAGACCACTTTATTGATCA 59.748 40.000 0.00 0.00 43.81 2.92
339 341 5.751586 TGGGGTAAGACCACTTTATTGATC 58.248 41.667 0.00 0.00 43.81 2.92
340 342 5.789574 TGGGGTAAGACCACTTTATTGAT 57.210 39.130 0.00 0.00 43.81 2.57
341 343 5.789574 ATGGGGTAAGACCACTTTATTGA 57.210 39.130 0.00 0.00 43.81 2.57
342 344 7.948034 TTTATGGGGTAAGACCACTTTATTG 57.052 36.000 0.00 0.00 43.81 1.90
343 345 8.959676 TTTTTATGGGGTAAGACCACTTTATT 57.040 30.769 0.00 0.00 43.81 1.40
344 346 8.395605 TCTTTTTATGGGGTAAGACCACTTTAT 58.604 33.333 0.00 0.00 43.81 1.40
345 347 7.757611 TCTTTTTATGGGGTAAGACCACTTTA 58.242 34.615 0.00 0.00 43.81 1.85
346 348 6.616577 TCTTTTTATGGGGTAAGACCACTTT 58.383 36.000 0.00 0.00 43.81 2.66
347 349 6.208840 TCTTTTTATGGGGTAAGACCACTT 57.791 37.500 0.00 0.00 43.81 3.16
348 350 5.853572 TCTTTTTATGGGGTAAGACCACT 57.146 39.130 0.00 0.00 43.81 4.00
349 351 6.904463 TTTCTTTTTATGGGGTAAGACCAC 57.096 37.500 0.00 0.00 43.70 4.16
350 352 6.268158 GGTTTTCTTTTTATGGGGTAAGACCA 59.732 38.462 0.00 0.00 41.02 4.02
351 353 6.495872 AGGTTTTCTTTTTATGGGGTAAGACC 59.504 38.462 0.00 0.00 37.60 3.85
352 354 7.534723 AGGTTTTCTTTTTATGGGGTAAGAC 57.465 36.000 0.00 0.00 0.00 3.01
353 355 8.555896 AAAGGTTTTCTTTTTATGGGGTAAGA 57.444 30.769 0.00 0.00 42.62 2.10
354 356 7.876068 GGAAAGGTTTTCTTTTTATGGGGTAAG 59.124 37.037 2.03 0.00 45.00 2.34
355 357 7.202112 GGGAAAGGTTTTCTTTTTATGGGGTAA 60.202 37.037 2.03 0.00 45.00 2.85
356 358 6.270463 GGGAAAGGTTTTCTTTTTATGGGGTA 59.730 38.462 2.03 0.00 45.00 3.69
357 359 5.072600 GGGAAAGGTTTTCTTTTTATGGGGT 59.927 40.000 2.03 0.00 45.00 4.95
358 360 5.514136 GGGGAAAGGTTTTCTTTTTATGGGG 60.514 44.000 2.03 0.00 45.00 4.96
359 361 5.556915 GGGGAAAGGTTTTCTTTTTATGGG 58.443 41.667 2.03 0.00 45.00 4.00
360 362 5.234752 CGGGGAAAGGTTTTCTTTTTATGG 58.765 41.667 2.03 0.00 45.00 2.74
361 363 4.688879 GCGGGGAAAGGTTTTCTTTTTATG 59.311 41.667 2.03 0.00 45.00 1.90
362 364 4.559906 CGCGGGGAAAGGTTTTCTTTTTAT 60.560 41.667 0.00 0.00 45.00 1.40
363 365 3.243468 CGCGGGGAAAGGTTTTCTTTTTA 60.243 43.478 0.00 0.00 45.00 1.52
364 366 2.482316 CGCGGGGAAAGGTTTTCTTTTT 60.482 45.455 0.00 0.00 45.00 1.94
365 367 1.067974 CGCGGGGAAAGGTTTTCTTTT 59.932 47.619 0.00 0.00 45.00 2.27
367 369 0.179012 TCGCGGGGAAAGGTTTTCTT 60.179 50.000 6.13 0.00 37.28 2.52
368 370 0.179012 TTCGCGGGGAAAGGTTTTCT 60.179 50.000 6.13 0.00 0.00 2.52
369 371 0.669619 TTTCGCGGGGAAAGGTTTTC 59.330 50.000 15.25 0.00 39.67 2.29
370 372 1.112950 TTTTCGCGGGGAAAGGTTTT 58.887 45.000 17.88 0.00 44.95 2.43
371 373 1.112950 TTTTTCGCGGGGAAAGGTTT 58.887 45.000 17.88 0.00 44.95 3.27
372 374 2.809952 TTTTTCGCGGGGAAAGGTT 58.190 47.368 17.88 0.00 44.95 3.50
518 523 2.392662 TGGTGACAATTTTGGAGCCAA 58.607 42.857 0.00 0.00 37.44 4.52
600 610 4.039124 ACGTAGGCATATCACATGATCACA 59.961 41.667 0.00 0.00 36.05 3.58
601 611 4.560128 ACGTAGGCATATCACATGATCAC 58.440 43.478 0.00 0.00 36.05 3.06
602 612 4.871933 ACGTAGGCATATCACATGATCA 57.128 40.909 0.00 0.00 36.05 2.92
614 624 6.293845 CCGTCTAGTAGAAAATACGTAGGCAT 60.294 42.308 0.17 0.00 0.00 4.40
618 628 6.052840 TGCCGTCTAGTAGAAAATACGTAG 57.947 41.667 0.17 0.00 0.00 3.51
684 697 5.121105 TCCTACTTTGATGTCATGCATGAG 58.879 41.667 29.38 17.57 38.06 2.90
706 719 5.108705 CGAGAATACGTTGACGATTTAGCTC 60.109 44.000 10.87 7.82 43.02 4.09
733 905 4.023450 TCGACAGAGTGGTAAACAGTAGTG 60.023 45.833 0.00 0.00 31.34 2.74
820 1006 2.280389 CCACCATCCGATCTGCCG 60.280 66.667 0.00 0.00 0.00 5.69
821 1007 2.111878 CCCACCATCCGATCTGCC 59.888 66.667 0.00 0.00 0.00 4.85
846 1046 6.366644 TCTCGTCGAACGTTAAATAAGTTG 57.633 37.500 0.00 0.00 43.14 3.16
866 1066 6.039382 ACTGGTTGACACCTATTTTGTTTCTC 59.961 38.462 0.00 0.00 44.61 2.87
885 1097 1.227556 GCGTCACTGACCACTGGTT 60.228 57.895 1.13 0.00 35.25 3.67
897 1109 3.414700 CAGTGGGAAGCGCGTCAC 61.415 66.667 24.41 21.97 0.00 3.67
898 1110 3.573772 CTCAGTGGGAAGCGCGTCA 62.574 63.158 24.41 8.20 0.00 4.35
899 1111 2.811317 CTCAGTGGGAAGCGCGTC 60.811 66.667 15.40 15.40 0.00 5.19
902 1114 3.123620 CTGCTCAGTGGGAAGCGC 61.124 66.667 0.00 0.00 0.00 5.92
974 1190 2.470801 GATCAGGAGCTAGCTCGGCG 62.471 65.000 32.78 24.12 43.59 6.46
1488 1706 7.043590 GCTATTTGAGATGTGCATTGAATGAAC 60.044 37.037 9.38 9.38 39.38 3.18
1489 1707 6.976349 GCTATTTGAGATGTGCATTGAATGAA 59.024 34.615 9.76 0.00 0.00 2.57
1490 1708 6.460537 GGCTATTTGAGATGTGCATTGAATGA 60.461 38.462 9.76 0.00 0.00 2.57
1491 1709 5.690409 GGCTATTTGAGATGTGCATTGAATG 59.310 40.000 0.00 0.00 0.00 2.67
1494 1712 3.633525 GGGCTATTTGAGATGTGCATTGA 59.366 43.478 0.00 0.00 0.00 2.57
1515 1747 1.097547 GGTGAACCATGGAGCATCGG 61.098 60.000 21.47 0.00 33.16 4.18
2084 2325 2.460330 CGAGTGCGCTCTTGGAAAT 58.540 52.632 24.01 0.00 39.53 2.17
2504 2803 6.704050 ACAAAATTTTCCCTTATTGTTCACGG 59.296 34.615 0.00 0.00 0.00 4.94
2536 2866 2.161012 CAGTAGCTGTGGCATGAAAGTG 59.839 50.000 0.00 0.00 41.70 3.16
2586 2934 3.477530 AGGCTACAGTTTCAGTGTTTCC 58.522 45.455 0.00 0.00 33.15 3.13
2606 2954 7.438160 TCTGAGCGAAAAATATACACCACATAG 59.562 37.037 0.00 0.00 0.00 2.23
2620 2968 6.200665 CCATTTTCACAATTCTGAGCGAAAAA 59.799 34.615 0.00 0.00 35.01 1.94
2638 3180 7.039313 AGAAAATATAAGCCGGACCATTTTC 57.961 36.000 20.71 20.71 40.30 2.29
2639 3181 7.418337 AAGAAAATATAAGCCGGACCATTTT 57.582 32.000 5.05 8.89 0.00 1.82
2649 3191 6.706716 ACCTAGCGAGAAAGAAAATATAAGCC 59.293 38.462 0.00 0.00 0.00 4.35
2652 3194 7.494625 CACCACCTAGCGAGAAAGAAAATATAA 59.505 37.037 0.00 0.00 0.00 0.98
2703 3431 0.608130 GGGTGTGCAAGAAATTCCCC 59.392 55.000 0.00 0.00 0.00 4.81
2704 3432 0.243636 CGGGTGTGCAAGAAATTCCC 59.756 55.000 0.00 0.00 0.00 3.97
2705 3433 1.243902 TCGGGTGTGCAAGAAATTCC 58.756 50.000 0.00 0.00 0.00 3.01
2706 3434 3.575965 AATCGGGTGTGCAAGAAATTC 57.424 42.857 0.00 0.00 0.00 2.17
2708 3436 4.079253 ACTAAATCGGGTGTGCAAGAAAT 58.921 39.130 0.00 0.00 0.00 2.17
2709 3437 3.482436 ACTAAATCGGGTGTGCAAGAAA 58.518 40.909 0.00 0.00 0.00 2.52
2710 3438 3.134574 ACTAAATCGGGTGTGCAAGAA 57.865 42.857 0.00 0.00 0.00 2.52
2711 3439 2.851263 ACTAAATCGGGTGTGCAAGA 57.149 45.000 0.00 0.00 0.00 3.02
2712 3440 4.379082 GGTTAACTAAATCGGGTGTGCAAG 60.379 45.833 5.42 0.00 0.00 4.01
2713 3441 3.502979 GGTTAACTAAATCGGGTGTGCAA 59.497 43.478 5.42 0.00 0.00 4.08
2714 3442 3.075884 GGTTAACTAAATCGGGTGTGCA 58.924 45.455 5.42 0.00 0.00 4.57
2715 3443 3.340928 AGGTTAACTAAATCGGGTGTGC 58.659 45.455 5.42 0.00 0.00 4.57
2717 3445 6.549433 TCATAGGTTAACTAAATCGGGTGT 57.451 37.500 5.42 0.00 34.79 4.16
2718 3446 5.465724 GCTCATAGGTTAACTAAATCGGGTG 59.534 44.000 5.42 0.00 34.79 4.61
2720 3448 5.607477 TGCTCATAGGTTAACTAAATCGGG 58.393 41.667 5.42 0.00 34.79 5.14
2722 3450 6.018180 GGGTTGCTCATAGGTTAACTAAATCG 60.018 42.308 5.42 0.00 34.79 3.34
2723 3451 6.826741 TGGGTTGCTCATAGGTTAACTAAATC 59.173 38.462 5.42 0.00 34.79 2.17
2724 3452 6.727394 TGGGTTGCTCATAGGTTAACTAAAT 58.273 36.000 5.42 0.00 34.79 1.40
2726 3454 5.765576 TGGGTTGCTCATAGGTTAACTAA 57.234 39.130 5.42 0.00 34.79 2.24
2727 3455 5.427157 TGATGGGTTGCTCATAGGTTAACTA 59.573 40.000 5.42 0.00 35.80 2.24
2728 3456 4.227300 TGATGGGTTGCTCATAGGTTAACT 59.773 41.667 5.42 0.00 0.00 2.24
2729 3457 4.523083 TGATGGGTTGCTCATAGGTTAAC 58.477 43.478 0.00 0.00 0.00 2.01
2730 3458 4.853468 TGATGGGTTGCTCATAGGTTAA 57.147 40.909 0.00 0.00 0.00 2.01
2733 3461 3.010584 ACTTTGATGGGTTGCTCATAGGT 59.989 43.478 0.00 0.00 0.00 3.08
2734 3462 3.379372 CACTTTGATGGGTTGCTCATAGG 59.621 47.826 0.00 0.00 0.00 2.57
2735 3463 4.012374 ACACTTTGATGGGTTGCTCATAG 58.988 43.478 0.00 0.00 0.00 2.23
2736 3464 4.009675 GACACTTTGATGGGTTGCTCATA 58.990 43.478 0.00 0.00 0.00 2.15
2759 3487 0.032678 CCAGTTCAGCACACTCGTCT 59.967 55.000 0.00 0.00 0.00 4.18
2867 3709 2.589720 TGATCTTGCCTATGCCCATTG 58.410 47.619 0.00 0.00 36.33 2.82
2872 3714 0.957362 GCCTTGATCTTGCCTATGCC 59.043 55.000 0.00 0.00 36.33 4.40
2873 3715 1.336125 GTGCCTTGATCTTGCCTATGC 59.664 52.381 0.00 0.00 38.26 3.14
2890 3732 5.335191 CCCTTCTATCTTCTTTTGTGTGTGC 60.335 44.000 0.00 0.00 0.00 4.57
2898 3740 9.367160 TGTGATTTTTCCCTTCTATCTTCTTTT 57.633 29.630 0.00 0.00 0.00 2.27
2923 3765 4.592997 AAATTCCCCTCCCTCTAAACTG 57.407 45.455 0.00 0.00 0.00 3.16
2924 3766 5.333581 CAAAAATTCCCCTCCCTCTAAACT 58.666 41.667 0.00 0.00 0.00 2.66
2925 3767 4.466370 CCAAAAATTCCCCTCCCTCTAAAC 59.534 45.833 0.00 0.00 0.00 2.01
2926 3768 4.108942 ACCAAAAATTCCCCTCCCTCTAAA 59.891 41.667 0.00 0.00 0.00 1.85
2927 3769 3.665618 ACCAAAAATTCCCCTCCCTCTAA 59.334 43.478 0.00 0.00 0.00 2.10
2928 3770 3.268595 GACCAAAAATTCCCCTCCCTCTA 59.731 47.826 0.00 0.00 0.00 2.43
2929 3771 2.043115 GACCAAAAATTCCCCTCCCTCT 59.957 50.000 0.00 0.00 0.00 3.69
2930 3772 2.043115 AGACCAAAAATTCCCCTCCCTC 59.957 50.000 0.00 0.00 0.00 4.30
2931 3773 2.081855 AGACCAAAAATTCCCCTCCCT 58.918 47.619 0.00 0.00 0.00 4.20
2932 3774 2.623418 AGACCAAAAATTCCCCTCCC 57.377 50.000 0.00 0.00 0.00 4.30
2933 3775 3.960755 CCATAGACCAAAAATTCCCCTCC 59.039 47.826 0.00 0.00 0.00 4.30
2934 3776 3.960755 CCCATAGACCAAAAATTCCCCTC 59.039 47.826 0.00 0.00 0.00 4.30
2935 3777 3.600617 TCCCATAGACCAAAAATTCCCCT 59.399 43.478 0.00 0.00 0.00 4.79
2936 3778 3.989056 TCCCATAGACCAAAAATTCCCC 58.011 45.455 0.00 0.00 0.00 4.81
2937 3779 4.775253 TGTTCCCATAGACCAAAAATTCCC 59.225 41.667 0.00 0.00 0.00 3.97
2938 3780 5.993748 TGTTCCCATAGACCAAAAATTCC 57.006 39.130 0.00 0.00 0.00 3.01
2939 3781 7.653311 GCATATGTTCCCATAGACCAAAAATTC 59.347 37.037 4.29 0.00 36.99 2.17
2940 3782 7.125507 TGCATATGTTCCCATAGACCAAAAATT 59.874 33.333 4.29 0.00 36.99 1.82
2941 3783 6.610830 TGCATATGTTCCCATAGACCAAAAAT 59.389 34.615 4.29 0.00 36.99 1.82
2942 3784 5.954752 TGCATATGTTCCCATAGACCAAAAA 59.045 36.000 4.29 0.00 36.99 1.94
2943 3785 5.359576 GTGCATATGTTCCCATAGACCAAAA 59.640 40.000 4.29 0.00 36.99 2.44
2944 3786 4.887071 GTGCATATGTTCCCATAGACCAAA 59.113 41.667 4.29 0.00 36.99 3.28
2945 3787 4.460263 GTGCATATGTTCCCATAGACCAA 58.540 43.478 4.29 0.00 36.99 3.67
2946 3788 3.181445 GGTGCATATGTTCCCATAGACCA 60.181 47.826 4.29 0.00 36.99 4.02
2947 3789 3.412386 GGTGCATATGTTCCCATAGACC 58.588 50.000 4.29 0.00 36.99 3.85
2948 3790 3.073062 AGGGTGCATATGTTCCCATAGAC 59.927 47.826 27.04 9.47 42.12 2.59
2949 3791 3.326521 AGGGTGCATATGTTCCCATAGA 58.673 45.455 27.04 0.00 42.12 1.98
2950 3792 3.795688 AGGGTGCATATGTTCCCATAG 57.204 47.619 27.04 0.00 42.12 2.23
2951 3793 6.126507 CCATATAGGGTGCATATGTTCCCATA 60.127 42.308 27.04 22.38 42.12 2.74
2952 3794 5.340277 CCATATAGGGTGCATATGTTCCCAT 60.340 44.000 27.04 21.51 42.12 4.00
2953 3795 4.018506 CCATATAGGGTGCATATGTTCCCA 60.019 45.833 27.04 18.14 42.12 4.37
2954 3796 4.227300 TCCATATAGGGTGCATATGTTCCC 59.773 45.833 21.69 21.69 35.47 3.97
2955 3797 5.435686 TCCATATAGGGTGCATATGTTCC 57.564 43.478 2.85 7.12 35.47 3.62
2956 3798 7.759489 TTTTCCATATAGGGTGCATATGTTC 57.241 36.000 2.85 0.00 35.47 3.18
2987 3829 9.843874 GGAATTTTCGACTTTTTGTTGAATTAC 57.156 29.630 0.00 0.00 45.50 1.89
2988 3830 9.810545 AGGAATTTTCGACTTTTTGTTGAATTA 57.189 25.926 0.00 0.00 45.50 1.40
2989 3831 8.603181 CAGGAATTTTCGACTTTTTGTTGAATT 58.397 29.630 0.00 0.00 45.50 2.17
2990 3832 7.978975 TCAGGAATTTTCGACTTTTTGTTGAAT 59.021 29.630 0.00 0.00 45.50 2.57
2991 3833 7.316640 TCAGGAATTTTCGACTTTTTGTTGAA 58.683 30.769 0.00 0.00 44.79 2.69
2992 3834 6.857956 TCAGGAATTTTCGACTTTTTGTTGA 58.142 32.000 0.00 0.00 37.30 3.18
2993 3835 7.518731 TTCAGGAATTTTCGACTTTTTGTTG 57.481 32.000 0.00 0.00 0.00 3.33
2994 3836 8.716646 ATTTCAGGAATTTTCGACTTTTTGTT 57.283 26.923 0.00 0.00 0.00 2.83
2995 3837 8.716646 AATTTCAGGAATTTTCGACTTTTTGT 57.283 26.923 0.00 0.00 34.27 2.83
3030 3872 9.939802 ACGAGTAAAATAGAAGGTCAAGTTTAT 57.060 29.630 0.00 0.00 0.00 1.40
3031 3873 9.199982 CACGAGTAAAATAGAAGGTCAAGTTTA 57.800 33.333 0.00 0.00 0.00 2.01
3032 3874 7.929785 TCACGAGTAAAATAGAAGGTCAAGTTT 59.070 33.333 0.00 0.00 0.00 2.66
3033 3875 7.439381 TCACGAGTAAAATAGAAGGTCAAGTT 58.561 34.615 0.00 0.00 0.00 2.66
3034 3876 6.989659 TCACGAGTAAAATAGAAGGTCAAGT 58.010 36.000 0.00 0.00 0.00 3.16
3035 3877 7.313646 TCTCACGAGTAAAATAGAAGGTCAAG 58.686 38.462 0.00 0.00 0.00 3.02
3036 3878 7.223260 TCTCACGAGTAAAATAGAAGGTCAA 57.777 36.000 0.00 0.00 0.00 3.18
3037 3879 6.829229 TCTCACGAGTAAAATAGAAGGTCA 57.171 37.500 0.00 0.00 0.00 4.02
3038 3880 8.705048 ATTTCTCACGAGTAAAATAGAAGGTC 57.295 34.615 0.00 0.00 0.00 3.85
3047 3889 9.058174 TGTGGATTTTATTTCTCACGAGTAAAA 57.942 29.630 0.00 4.51 31.59 1.52
3048 3890 8.610248 TGTGGATTTTATTTCTCACGAGTAAA 57.390 30.769 0.00 0.00 0.00 2.01
3049 3891 8.610248 TTGTGGATTTTATTTCTCACGAGTAA 57.390 30.769 0.00 0.00 0.00 2.24
3050 3892 8.610248 TTTGTGGATTTTATTTCTCACGAGTA 57.390 30.769 0.00 0.00 0.00 2.59
3051 3893 7.504924 TTTGTGGATTTTATTTCTCACGAGT 57.495 32.000 0.00 0.00 0.00 4.18
3052 3894 8.795786 TTTTTGTGGATTTTATTTCTCACGAG 57.204 30.769 0.00 0.00 0.00 4.18
3114 3956 9.542462 GTCACTATTCACACTATATTAGCCAAA 57.458 33.333 0.00 0.00 0.00 3.28
3115 3957 8.148351 GGTCACTATTCACACTATATTAGCCAA 58.852 37.037 0.00 0.00 0.00 4.52
3116 3958 7.509318 AGGTCACTATTCACACTATATTAGCCA 59.491 37.037 0.00 0.00 0.00 4.75
3117 3959 7.897864 AGGTCACTATTCACACTATATTAGCC 58.102 38.462 0.00 0.00 0.00 3.93
3125 3967 9.582648 TGCTATTATAGGTCACTATTCACACTA 57.417 33.333 1.12 0.00 40.35 2.74
3126 3968 8.478775 TGCTATTATAGGTCACTATTCACACT 57.521 34.615 1.12 0.00 40.35 3.55
3127 3969 9.542462 TTTGCTATTATAGGTCACTATTCACAC 57.458 33.333 1.12 0.00 40.35 3.82
3167 4009 4.021544 ACAAAAGTTGACCTCACAGCAAAA 60.022 37.500 0.00 0.00 0.00 2.44
3172 4014 8.702163 AAAAATAACAAAAGTTGACCTCACAG 57.298 30.769 0.00 0.00 0.00 3.66
3196 4368 9.390795 GCACTAGTATATAAATCTCGACGAAAA 57.609 33.333 0.00 0.00 0.00 2.29
3199 4371 7.662604 TGCACTAGTATATAAATCTCGACGA 57.337 36.000 0.00 0.00 0.00 4.20
3219 4391 6.364976 ACAAAACACTTGACTTACTTTTGCAC 59.635 34.615 0.00 0.00 33.72 4.57
3296 4596 6.061022 TGGTTGTATATGCACCCTATATGG 57.939 41.667 8.77 0.00 0.00 2.74
3299 4599 7.221450 GTTCTTGGTTGTATATGCACCCTATA 58.779 38.462 8.77 0.00 0.00 1.31
3303 4603 3.380320 GGTTCTTGGTTGTATATGCACCC 59.620 47.826 0.12 0.12 0.00 4.61
3304 4604 4.013728 TGGTTCTTGGTTGTATATGCACC 58.986 43.478 0.00 0.00 0.00 5.01
3305 4605 5.637006 TTGGTTCTTGGTTGTATATGCAC 57.363 39.130 0.00 0.00 0.00 4.57
3306 4606 5.772672 ACTTTGGTTCTTGGTTGTATATGCA 59.227 36.000 0.00 0.00 0.00 3.96
3307 4607 6.092748 CACTTTGGTTCTTGGTTGTATATGC 58.907 40.000 0.00 0.00 0.00 3.14
3308 4608 7.214467 ACACTTTGGTTCTTGGTTGTATATG 57.786 36.000 0.00 0.00 0.00 1.78
3309 4609 9.528489 AATACACTTTGGTTCTTGGTTGTATAT 57.472 29.630 0.00 0.00 0.00 0.86
3311 4611 7.833285 AATACACTTTGGTTCTTGGTTGTAT 57.167 32.000 0.00 0.00 0.00 2.29
3312 4612 7.201839 GGAAATACACTTTGGTTCTTGGTTGTA 60.202 37.037 0.00 0.00 0.00 2.41
3313 4613 6.406512 GGAAATACACTTTGGTTCTTGGTTGT 60.407 38.462 0.00 0.00 0.00 3.32
3314 4614 5.983118 GGAAATACACTTTGGTTCTTGGTTG 59.017 40.000 0.00 0.00 0.00 3.77
3315 4615 5.069914 GGGAAATACACTTTGGTTCTTGGTT 59.930 40.000 0.00 0.00 0.00 3.67
3316 4616 4.587262 GGGAAATACACTTTGGTTCTTGGT 59.413 41.667 0.00 0.00 0.00 3.67
3317 4617 4.021456 GGGGAAATACACTTTGGTTCTTGG 60.021 45.833 0.00 0.00 0.00 3.61
3318 4618 4.586841 TGGGGAAATACACTTTGGTTCTTG 59.413 41.667 0.00 0.00 0.00 3.02
3319 4619 4.810345 TGGGGAAATACACTTTGGTTCTT 58.190 39.130 0.00 0.00 0.00 2.52
3321 4621 4.149598 ACTGGGGAAATACACTTTGGTTC 58.850 43.478 0.00 0.00 0.00 3.62
3324 4624 6.007703 TCTAAACTGGGGAAATACACTTTGG 58.992 40.000 0.00 0.00 0.00 3.28
3325 4625 6.940298 TCTCTAAACTGGGGAAATACACTTTG 59.060 38.462 0.00 0.00 0.00 2.77
3326 4626 7.017254 TCTCTCTAAACTGGGGAAATACACTTT 59.983 37.037 0.00 0.00 0.00 2.66
3327 4627 6.500751 TCTCTCTAAACTGGGGAAATACACTT 59.499 38.462 0.00 0.00 0.00 3.16
3329 4629 6.070710 AGTCTCTCTAAACTGGGGAAATACAC 60.071 42.308 0.00 0.00 0.00 2.90
3330 4630 6.023603 AGTCTCTCTAAACTGGGGAAATACA 58.976 40.000 0.00 0.00 0.00 2.29
3331 4631 6.547930 AGTCTCTCTAAACTGGGGAAATAC 57.452 41.667 0.00 0.00 0.00 1.89
3333 4633 7.136203 AGATAGTCTCTCTAAACTGGGGAAAT 58.864 38.462 0.00 0.00 31.94 2.17
3334 4634 6.503944 AGATAGTCTCTCTAAACTGGGGAAA 58.496 40.000 0.00 0.00 31.94 3.13
3337 4637 6.155393 ACAAAGATAGTCTCTCTAAACTGGGG 59.845 42.308 0.00 0.00 31.03 4.96
3359 4659 9.378551 ACGAGCTATAGATTGTCAAAAATACAA 57.621 29.630 4.99 0.00 40.85 2.41
3363 5044 8.942338 TGTACGAGCTATAGATTGTCAAAAAT 57.058 30.769 14.16 0.00 29.75 1.82
3370 5051 7.096884 TGACTTTGTACGAGCTATAGATTGT 57.903 36.000 15.05 15.05 32.13 2.71
3371 5052 7.987268 TTGACTTTGTACGAGCTATAGATTG 57.013 36.000 3.21 3.42 0.00 2.67
3373 5054 7.147880 ACCTTTGACTTTGTACGAGCTATAGAT 60.148 37.037 3.21 0.00 0.00 1.98
3375 5056 6.331061 ACCTTTGACTTTGTACGAGCTATAG 58.669 40.000 0.00 0.00 0.00 1.31
3376 5057 6.276832 ACCTTTGACTTTGTACGAGCTATA 57.723 37.500 0.00 0.00 0.00 1.31
3382 5063 4.139859 TCCAACCTTTGACTTTGTACGA 57.860 40.909 0.00 0.00 0.00 3.43
3383 5064 4.513692 TGATCCAACCTTTGACTTTGTACG 59.486 41.667 0.00 0.00 0.00 3.67
3384 5065 6.385649 TTGATCCAACCTTTGACTTTGTAC 57.614 37.500 0.00 0.00 0.00 2.90
3385 5066 7.595819 ATTTGATCCAACCTTTGACTTTGTA 57.404 32.000 0.00 0.00 0.00 2.41
3386 5067 5.930837 TTTGATCCAACCTTTGACTTTGT 57.069 34.783 0.00 0.00 0.00 2.83
3387 5068 7.041848 GGAAATTTGATCCAACCTTTGACTTTG 60.042 37.037 0.00 0.00 36.92 2.77
3390 5071 5.840693 AGGAAATTTGATCCAACCTTTGACT 59.159 36.000 0.00 0.00 39.55 3.41
3391 5072 6.101650 AGGAAATTTGATCCAACCTTTGAC 57.898 37.500 0.00 0.00 39.55 3.18
3392 5073 6.745794 AAGGAAATTTGATCCAACCTTTGA 57.254 33.333 0.00 0.00 39.55 2.69
3393 5074 7.895759 TCTAAGGAAATTTGATCCAACCTTTG 58.104 34.615 9.57 8.36 39.55 2.77
3394 5075 7.310052 GCTCTAAGGAAATTTGATCCAACCTTT 60.310 37.037 9.57 0.00 39.55 3.11
3395 5076 6.153510 GCTCTAAGGAAATTTGATCCAACCTT 59.846 38.462 0.00 2.87 39.55 3.50
3396 5077 5.654209 GCTCTAAGGAAATTTGATCCAACCT 59.346 40.000 0.00 0.00 39.55 3.50
3397 5078 5.418840 TGCTCTAAGGAAATTTGATCCAACC 59.581 40.000 0.00 0.00 39.55 3.77
3399 5080 6.097270 CCATGCTCTAAGGAAATTTGATCCAA 59.903 38.462 0.00 0.00 39.55 3.53
3401 5082 5.595952 ACCATGCTCTAAGGAAATTTGATCC 59.404 40.000 0.00 0.00 37.22 3.36
3403 5084 8.593945 TTAACCATGCTCTAAGGAAATTTGAT 57.406 30.769 0.00 0.00 0.00 2.57
3405 5086 9.956720 CTATTAACCATGCTCTAAGGAAATTTG 57.043 33.333 0.00 0.00 0.00 2.32
3406 5087 9.700831 ACTATTAACCATGCTCTAAGGAAATTT 57.299 29.630 0.00 0.00 0.00 1.82
3416 5097 8.924303 TGTTGACTATACTATTAACCATGCTCT 58.076 33.333 0.00 0.00 0.00 4.09
3418 5099 7.657761 GCTGTTGACTATACTATTAACCATGCT 59.342 37.037 0.00 0.00 0.00 3.79
3419 5100 7.095187 GGCTGTTGACTATACTATTAACCATGC 60.095 40.741 0.00 0.00 0.00 4.06
3420 5101 7.116376 CGGCTGTTGACTATACTATTAACCATG 59.884 40.741 0.00 0.00 0.00 3.66
3421 5102 7.152645 CGGCTGTTGACTATACTATTAACCAT 58.847 38.462 0.00 0.00 0.00 3.55
3422 5103 6.461927 CCGGCTGTTGACTATACTATTAACCA 60.462 42.308 0.00 0.00 0.00 3.67
3423 5104 5.924825 CCGGCTGTTGACTATACTATTAACC 59.075 44.000 0.00 0.00 0.00 2.85
3424 5105 5.404667 GCCGGCTGTTGACTATACTATTAAC 59.595 44.000 22.15 0.00 0.00 2.01
3426 5107 4.831155 AGCCGGCTGTTGACTATACTATTA 59.169 41.667 32.33 0.00 0.00 0.98
3428 5109 3.231818 AGCCGGCTGTTGACTATACTAT 58.768 45.455 32.33 0.00 0.00 2.12
3429 5110 2.662866 AGCCGGCTGTTGACTATACTA 58.337 47.619 32.33 0.00 0.00 1.82
3430 5111 1.486211 AGCCGGCTGTTGACTATACT 58.514 50.000 32.33 0.00 0.00 2.12
3431 5112 3.662247 ATAGCCGGCTGTTGACTATAC 57.338 47.619 38.98 0.00 0.00 1.47
3433 5114 3.832490 TCATATAGCCGGCTGTTGACTAT 59.168 43.478 38.98 23.73 0.00 2.12
3435 5116 2.039418 TCATATAGCCGGCTGTTGACT 58.961 47.619 38.98 13.82 0.00 3.41
3436 5117 2.526304 TCATATAGCCGGCTGTTGAC 57.474 50.000 38.98 1.13 0.00 3.18
3438 5119 2.838736 ACTTCATATAGCCGGCTGTTG 58.161 47.619 38.98 29.14 0.00 3.33
3440 5121 2.838736 CAACTTCATATAGCCGGCTGT 58.161 47.619 38.98 34.06 0.00 4.40
3441 5122 1.532868 GCAACTTCATATAGCCGGCTG 59.467 52.381 38.98 23.02 0.00 4.85
3443 5124 1.593196 TGCAACTTCATATAGCCGGC 58.407 50.000 21.89 21.89 0.00 6.13
3444 5125 2.290641 GGTTGCAACTTCATATAGCCGG 59.709 50.000 27.64 0.00 0.00 6.13
3445 5126 3.206150 AGGTTGCAACTTCATATAGCCG 58.794 45.455 27.64 0.00 0.00 5.52
3447 5526 4.635765 TGTGAGGTTGCAACTTCATATAGC 59.364 41.667 37.04 26.65 45.03 2.97
3449 5528 9.710900 CTATATGTGAGGTTGCAACTTCATATA 57.289 33.333 38.47 38.47 45.67 0.86
3451 5530 7.564793 ACTATATGTGAGGTTGCAACTTCATA 58.435 34.615 37.04 34.75 45.03 2.15
3455 5534 8.807948 ATTAACTATATGTGAGGTTGCAACTT 57.192 30.769 27.64 21.86 0.00 2.66
3457 5536 8.438676 AGATTAACTATATGTGAGGTTGCAAC 57.561 34.615 21.59 21.59 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.