Multiple sequence alignment - TraesCS5B01G474500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G474500 | chr5B | 100.000 | 5457 | 0 | 0 | 1 | 5457 | 647945357 | 647939901 | 0.000000e+00 | 10078.0 |
1 | TraesCS5B01G474500 | chr5B | 92.300 | 987 | 49 | 9 | 4132 | 5096 | 647935457 | 647934476 | 0.000000e+00 | 1376.0 |
2 | TraesCS5B01G474500 | chr5B | 88.338 | 343 | 22 | 6 | 5095 | 5425 | 647934335 | 647933999 | 3.960000e-106 | 396.0 |
3 | TraesCS5B01G474500 | chr5B | 97.872 | 47 | 1 | 0 | 5411 | 5457 | 647933123 | 647933077 | 1.260000e-11 | 82.4 |
4 | TraesCS5B01G474500 | chr5D | 93.995 | 2015 | 78 | 16 | 2852 | 4829 | 515116748 | 515114740 | 0.000000e+00 | 3011.0 |
5 | TraesCS5B01G474500 | chr5D | 89.076 | 2133 | 110 | 58 | 188 | 2271 | 515119455 | 515117397 | 0.000000e+00 | 2534.0 |
6 | TraesCS5B01G474500 | chr5D | 94.175 | 515 | 23 | 7 | 2280 | 2791 | 515117341 | 515116831 | 0.000000e+00 | 778.0 |
7 | TraesCS5B01G474500 | chr5D | 85.577 | 520 | 30 | 14 | 4828 | 5327 | 515114772 | 515114278 | 2.270000e-138 | 503.0 |
8 | TraesCS5B01G474500 | chr5A | 92.112 | 1610 | 63 | 29 | 701 | 2277 | 643333323 | 643331745 | 0.000000e+00 | 2211.0 |
9 | TraesCS5B01G474500 | chr5A | 92.587 | 1241 | 69 | 11 | 2852 | 4074 | 643330767 | 643329532 | 0.000000e+00 | 1760.0 |
10 | TraesCS5B01G474500 | chr5A | 87.500 | 736 | 37 | 28 | 4076 | 4782 | 643329369 | 643328660 | 0.000000e+00 | 798.0 |
11 | TraesCS5B01G474500 | chr5A | 96.850 | 254 | 8 | 0 | 2280 | 2533 | 643331690 | 643331437 | 5.050000e-115 | 425.0 |
12 | TraesCS5B01G474500 | chr5A | 92.784 | 291 | 21 | 0 | 2530 | 2820 | 643331133 | 643330843 | 6.540000e-114 | 422.0 |
13 | TraesCS5B01G474500 | chr5A | 86.364 | 352 | 30 | 6 | 5022 | 5361 | 643328485 | 643328140 | 8.640000e-98 | 368.0 |
14 | TraesCS5B01G474500 | chr5A | 82.235 | 349 | 54 | 6 | 2475 | 2820 | 220456674 | 220456331 | 1.490000e-75 | 294.0 |
15 | TraesCS5B01G474500 | chr5A | 81.934 | 393 | 21 | 15 | 191 | 561 | 643334196 | 643333832 | 2.490000e-73 | 287.0 |
16 | TraesCS5B01G474500 | chr5A | 92.708 | 192 | 8 | 4 | 4818 | 5008 | 643328655 | 643328469 | 6.970000e-69 | 272.0 |
17 | TraesCS5B01G474500 | chr2B | 83.573 | 487 | 74 | 4 | 2334 | 2820 | 268008493 | 268008013 | 8.340000e-123 | 451.0 |
18 | TraesCS5B01G474500 | chr2B | 85.500 | 400 | 46 | 9 | 1131 | 1521 | 217793206 | 217792810 | 1.830000e-109 | 407.0 |
19 | TraesCS5B01G474500 | chr2B | 82.126 | 207 | 20 | 8 | 1904 | 2109 | 34082992 | 34082802 | 1.570000e-35 | 161.0 |
20 | TraesCS5B01G474500 | chr7A | 82.988 | 482 | 74 | 5 | 2343 | 2820 | 558250238 | 558250715 | 3.910000e-116 | 429.0 |
21 | TraesCS5B01G474500 | chr4B | 82.952 | 481 | 75 | 5 | 2343 | 2820 | 300057403 | 300056927 | 1.400000e-115 | 427.0 |
22 | TraesCS5B01G474500 | chr4B | 88.889 | 90 | 7 | 3 | 2188 | 2277 | 399824186 | 399824272 | 2.080000e-19 | 108.0 |
23 | TraesCS5B01G474500 | chr2A | 85.250 | 400 | 47 | 6 | 1131 | 1521 | 172217695 | 172217299 | 8.510000e-108 | 401.0 |
24 | TraesCS5B01G474500 | chr2A | 82.639 | 432 | 64 | 9 | 2392 | 2820 | 761151984 | 761152407 | 6.680000e-99 | 372.0 |
25 | TraesCS5B01G474500 | chr2A | 76.691 | 695 | 105 | 22 | 2293 | 2960 | 49298591 | 49299255 | 3.150000e-87 | 333.0 |
26 | TraesCS5B01G474500 | chr1A | 82.025 | 484 | 75 | 11 | 2343 | 2820 | 200578796 | 200578319 | 8.510000e-108 | 401.0 |
27 | TraesCS5B01G474500 | chr1A | 85.836 | 353 | 46 | 4 | 1169 | 1519 | 487741430 | 487741080 | 6.680000e-99 | 372.0 |
28 | TraesCS5B01G474500 | chr2D | 85.000 | 400 | 48 | 9 | 1131 | 1521 | 161376748 | 161376352 | 3.960000e-106 | 396.0 |
29 | TraesCS5B01G474500 | chr3B | 86.782 | 348 | 44 | 2 | 1169 | 1515 | 603601790 | 603602136 | 2.380000e-103 | 387.0 |
30 | TraesCS5B01G474500 | chr1B | 86.119 | 353 | 45 | 4 | 1169 | 1519 | 522061107 | 522060757 | 1.430000e-100 | 377.0 |
31 | TraesCS5B01G474500 | chr1D | 85.836 | 353 | 46 | 4 | 1169 | 1519 | 388651055 | 388650705 | 6.680000e-99 | 372.0 |
32 | TraesCS5B01G474500 | chr6B | 82.524 | 206 | 18 | 7 | 1904 | 2109 | 269688685 | 269688498 | 1.220000e-36 | 165.0 |
33 | TraesCS5B01G474500 | chr7B | 87.023 | 131 | 15 | 2 | 2533 | 2663 | 295331341 | 295331213 | 4.400000e-31 | 147.0 |
34 | TraesCS5B01G474500 | chrUn | 86.131 | 137 | 8 | 3 | 5205 | 5330 | 186163737 | 186163601 | 2.650000e-28 | 137.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G474500 | chr5B | 647939901 | 647945357 | 5456 | True | 10078.000000 | 10078 | 100.000000 | 1 | 5457 | 1 | chr5B.!!$R1 | 5456 |
1 | TraesCS5B01G474500 | chr5B | 647933077 | 647935457 | 2380 | True | 618.133333 | 1376 | 92.836667 | 4132 | 5457 | 3 | chr5B.!!$R2 | 1325 |
2 | TraesCS5B01G474500 | chr5D | 515114278 | 515119455 | 5177 | True | 1706.500000 | 3011 | 90.705750 | 188 | 5327 | 4 | chr5D.!!$R1 | 5139 |
3 | TraesCS5B01G474500 | chr5A | 643328140 | 643334196 | 6056 | True | 817.875000 | 2211 | 90.354875 | 191 | 5361 | 8 | chr5A.!!$R2 | 5170 |
4 | TraesCS5B01G474500 | chr2A | 49298591 | 49299255 | 664 | False | 333.000000 | 333 | 76.691000 | 2293 | 2960 | 1 | chr2A.!!$F1 | 667 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
139 | 140 | 0.035176 | GCAGGCTCATCAGGAGGATC | 59.965 | 60.0 | 0.0 | 0.0 | 44.22 | 3.36 | F |
1530 | 1966 | 0.034337 | TCGTCCAGGTAACAAGGCAC | 59.966 | 55.0 | 0.0 | 0.0 | 41.41 | 5.01 | F |
1826 | 2262 | 1.588674 | TGTGTAACCGAACTGGCAAG | 58.411 | 50.0 | 0.0 | 0.0 | 43.94 | 4.01 | F |
2696 | 3496 | 1.194781 | AGACCTTGTCAGGCGGATGT | 61.195 | 55.0 | 0.0 | 0.0 | 45.56 | 3.06 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2110 | 2547 | 0.767375 | AGCACCAGGTGTCTGTTGAT | 59.233 | 50.0 | 21.26 | 0.0 | 35.73 | 2.57 | R |
2582 | 3382 | 0.954452 | CCCTGTTCAGTTTCTGCACC | 59.046 | 55.0 | 0.00 | 0.0 | 27.06 | 5.01 | R |
3549 | 4406 | 1.507140 | ACCCACTCTTGTCTTGGTCA | 58.493 | 50.0 | 0.00 | 0.0 | 0.00 | 4.02 | R |
4471 | 5510 | 0.320247 | AGCACCTCGTCTGCTTCTTG | 60.320 | 55.0 | 0.00 | 0.0 | 42.54 | 3.02 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
35 | 36 | 3.509290 | TCCGGTCAGAGGAGGACT | 58.491 | 61.111 | 0.00 | 0.00 | 35.61 | 3.85 |
36 | 37 | 1.000771 | TCCGGTCAGAGGAGGACTG | 60.001 | 63.158 | 0.00 | 0.00 | 40.55 | 3.51 |
37 | 38 | 3.609703 | CGGTCAGAGGAGGACTGG | 58.390 | 66.667 | 0.00 | 0.00 | 37.87 | 4.00 |
38 | 39 | 1.000771 | CGGTCAGAGGAGGACTGGA | 60.001 | 63.158 | 0.00 | 0.00 | 37.87 | 3.86 |
39 | 40 | 1.034838 | CGGTCAGAGGAGGACTGGAG | 61.035 | 65.000 | 0.00 | 0.00 | 37.87 | 3.86 |
40 | 41 | 0.333312 | GGTCAGAGGAGGACTGGAGA | 59.667 | 60.000 | 0.00 | 0.00 | 36.22 | 3.71 |
41 | 42 | 1.063266 | GGTCAGAGGAGGACTGGAGAT | 60.063 | 57.143 | 0.00 | 0.00 | 36.22 | 2.75 |
42 | 43 | 2.031120 | GTCAGAGGAGGACTGGAGATG | 58.969 | 57.143 | 0.00 | 0.00 | 36.22 | 2.90 |
43 | 44 | 1.925959 | TCAGAGGAGGACTGGAGATGA | 59.074 | 52.381 | 0.00 | 0.00 | 36.22 | 2.92 |
44 | 45 | 2.091939 | TCAGAGGAGGACTGGAGATGAG | 60.092 | 54.545 | 0.00 | 0.00 | 36.22 | 2.90 |
45 | 46 | 2.091939 | CAGAGGAGGACTGGAGATGAGA | 60.092 | 54.545 | 0.00 | 0.00 | 0.00 | 3.27 |
46 | 47 | 2.791179 | AGAGGAGGACTGGAGATGAGAT | 59.209 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
47 | 48 | 3.207321 | AGAGGAGGACTGGAGATGAGATT | 59.793 | 47.826 | 0.00 | 0.00 | 0.00 | 2.40 |
48 | 49 | 4.418526 | AGAGGAGGACTGGAGATGAGATTA | 59.581 | 45.833 | 0.00 | 0.00 | 0.00 | 1.75 |
49 | 50 | 5.103301 | AGAGGAGGACTGGAGATGAGATTAA | 60.103 | 44.000 | 0.00 | 0.00 | 0.00 | 1.40 |
50 | 51 | 5.533112 | AGGAGGACTGGAGATGAGATTAAA | 58.467 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
51 | 52 | 5.365314 | AGGAGGACTGGAGATGAGATTAAAC | 59.635 | 44.000 | 0.00 | 0.00 | 0.00 | 2.01 |
52 | 53 | 5.365314 | GGAGGACTGGAGATGAGATTAAACT | 59.635 | 44.000 | 0.00 | 0.00 | 0.00 | 2.66 |
53 | 54 | 6.551601 | GGAGGACTGGAGATGAGATTAAACTA | 59.448 | 42.308 | 0.00 | 0.00 | 0.00 | 2.24 |
54 | 55 | 7.354751 | AGGACTGGAGATGAGATTAAACTAC | 57.645 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
55 | 56 | 6.325286 | AGGACTGGAGATGAGATTAAACTACC | 59.675 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
56 | 57 | 6.150396 | ACTGGAGATGAGATTAAACTACCG | 57.850 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
57 | 58 | 4.945246 | TGGAGATGAGATTAAACTACCGC | 58.055 | 43.478 | 0.00 | 0.00 | 0.00 | 5.68 |
58 | 59 | 4.649674 | TGGAGATGAGATTAAACTACCGCT | 59.350 | 41.667 | 0.00 | 0.00 | 0.00 | 5.52 |
59 | 60 | 5.831525 | TGGAGATGAGATTAAACTACCGCTA | 59.168 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
60 | 61 | 6.016192 | TGGAGATGAGATTAAACTACCGCTAG | 60.016 | 42.308 | 0.00 | 0.00 | 0.00 | 3.42 |
61 | 62 | 6.207025 | GGAGATGAGATTAAACTACCGCTAGA | 59.793 | 42.308 | 0.00 | 0.00 | 0.00 | 2.43 |
62 | 63 | 7.255520 | GGAGATGAGATTAAACTACCGCTAGAA | 60.256 | 40.741 | 0.00 | 0.00 | 0.00 | 2.10 |
63 | 64 | 8.184304 | AGATGAGATTAAACTACCGCTAGAAT | 57.816 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
64 | 65 | 9.298250 | AGATGAGATTAAACTACCGCTAGAATA | 57.702 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
65 | 66 | 9.909644 | GATGAGATTAAACTACCGCTAGAATAA | 57.090 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
67 | 68 | 9.909644 | TGAGATTAAACTACCGCTAGAATAATC | 57.090 | 33.333 | 13.48 | 13.48 | 34.90 | 1.75 |
68 | 69 | 9.909644 | GAGATTAAACTACCGCTAGAATAATCA | 57.090 | 33.333 | 18.52 | 0.00 | 35.81 | 2.57 |
69 | 70 | 9.915629 | AGATTAAACTACCGCTAGAATAATCAG | 57.084 | 33.333 | 18.52 | 0.00 | 35.81 | 2.90 |
70 | 71 | 9.909644 | GATTAAACTACCGCTAGAATAATCAGA | 57.090 | 33.333 | 15.00 | 0.00 | 34.86 | 3.27 |
71 | 72 | 9.694137 | ATTAAACTACCGCTAGAATAATCAGAC | 57.306 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
72 | 73 | 5.359716 | ACTACCGCTAGAATAATCAGACG | 57.640 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
73 | 74 | 5.061853 | ACTACCGCTAGAATAATCAGACGA | 58.938 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
74 | 75 | 4.226113 | ACCGCTAGAATAATCAGACGAC | 57.774 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
75 | 76 | 3.884091 | ACCGCTAGAATAATCAGACGACT | 59.116 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
76 | 77 | 4.023878 | ACCGCTAGAATAATCAGACGACTC | 60.024 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
77 | 78 | 4.145276 | CGCTAGAATAATCAGACGACTCG | 58.855 | 47.826 | 0.00 | 0.00 | 0.00 | 4.18 |
78 | 79 | 4.318903 | CGCTAGAATAATCAGACGACTCGT | 60.319 | 45.833 | 3.08 | 3.08 | 45.10 | 4.18 |
87 | 88 | 3.659334 | ACGACTCGTCCGTAGCAA | 58.341 | 55.556 | 0.00 | 0.00 | 38.61 | 3.91 |
88 | 89 | 1.500844 | ACGACTCGTCCGTAGCAAG | 59.499 | 57.895 | 0.00 | 0.00 | 38.61 | 4.01 |
89 | 90 | 0.952497 | ACGACTCGTCCGTAGCAAGA | 60.952 | 55.000 | 0.00 | 0.00 | 38.61 | 3.02 |
90 | 91 | 0.377554 | CGACTCGTCCGTAGCAAGAT | 59.622 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
91 | 92 | 1.202154 | CGACTCGTCCGTAGCAAGATT | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
92 | 93 | 2.731341 | CGACTCGTCCGTAGCAAGATTT | 60.731 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
93 | 94 | 3.251571 | GACTCGTCCGTAGCAAGATTTT | 58.748 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
94 | 95 | 3.660865 | ACTCGTCCGTAGCAAGATTTTT | 58.339 | 40.909 | 0.00 | 0.00 | 0.00 | 1.94 |
95 | 96 | 4.813027 | ACTCGTCCGTAGCAAGATTTTTA | 58.187 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
96 | 97 | 5.416947 | ACTCGTCCGTAGCAAGATTTTTAT | 58.583 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
97 | 98 | 5.519206 | ACTCGTCCGTAGCAAGATTTTTATC | 59.481 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
98 | 99 | 4.807304 | TCGTCCGTAGCAAGATTTTTATCC | 59.193 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
99 | 100 | 4.317839 | CGTCCGTAGCAAGATTTTTATCCG | 60.318 | 45.833 | 0.00 | 0.00 | 0.00 | 4.18 |
100 | 101 | 3.558418 | TCCGTAGCAAGATTTTTATCCGC | 59.442 | 43.478 | 0.00 | 0.00 | 0.00 | 5.54 |
101 | 102 | 3.531982 | CGTAGCAAGATTTTTATCCGCG | 58.468 | 45.455 | 0.00 | 0.00 | 0.00 | 6.46 |
102 | 103 | 3.244345 | CGTAGCAAGATTTTTATCCGCGA | 59.756 | 43.478 | 8.23 | 0.00 | 0.00 | 5.87 |
103 | 104 | 4.260051 | CGTAGCAAGATTTTTATCCGCGAA | 60.260 | 41.667 | 8.23 | 0.00 | 0.00 | 4.70 |
104 | 105 | 4.016113 | AGCAAGATTTTTATCCGCGAAC | 57.984 | 40.909 | 8.23 | 0.00 | 0.00 | 3.95 |
105 | 106 | 3.689649 | AGCAAGATTTTTATCCGCGAACT | 59.310 | 39.130 | 8.23 | 0.00 | 0.00 | 3.01 |
106 | 107 | 3.786048 | GCAAGATTTTTATCCGCGAACTG | 59.214 | 43.478 | 8.23 | 0.00 | 0.00 | 3.16 |
107 | 108 | 3.675467 | AGATTTTTATCCGCGAACTGC | 57.325 | 42.857 | 8.23 | 0.00 | 41.47 | 4.40 |
116 | 117 | 2.167918 | GCGAACTGCGTGACGAAC | 59.832 | 61.111 | 10.10 | 0.00 | 43.41 | 3.95 |
129 | 130 | 4.473520 | CGAACGGGGCAGGCTCAT | 62.474 | 66.667 | 0.00 | 0.00 | 0.00 | 2.90 |
130 | 131 | 2.514824 | GAACGGGGCAGGCTCATC | 60.515 | 66.667 | 0.00 | 0.00 | 0.00 | 2.92 |
131 | 132 | 3.329542 | GAACGGGGCAGGCTCATCA | 62.330 | 63.158 | 0.00 | 0.00 | 0.00 | 3.07 |
132 | 133 | 3.335356 | AACGGGGCAGGCTCATCAG | 62.335 | 63.158 | 0.00 | 0.00 | 0.00 | 2.90 |
133 | 134 | 4.559063 | CGGGGCAGGCTCATCAGG | 62.559 | 72.222 | 0.00 | 0.00 | 0.00 | 3.86 |
134 | 135 | 3.092511 | GGGGCAGGCTCATCAGGA | 61.093 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
135 | 136 | 2.509916 | GGGCAGGCTCATCAGGAG | 59.490 | 66.667 | 0.00 | 0.00 | 46.93 | 3.69 |
136 | 137 | 2.509916 | GGCAGGCTCATCAGGAGG | 59.490 | 66.667 | 0.00 | 0.00 | 44.22 | 4.30 |
137 | 138 | 2.068821 | GGCAGGCTCATCAGGAGGA | 61.069 | 63.158 | 0.00 | 0.00 | 44.22 | 3.71 |
138 | 139 | 1.417288 | GGCAGGCTCATCAGGAGGAT | 61.417 | 60.000 | 0.00 | 0.00 | 44.22 | 3.24 |
139 | 140 | 0.035176 | GCAGGCTCATCAGGAGGATC | 59.965 | 60.000 | 0.00 | 0.00 | 44.22 | 3.36 |
140 | 141 | 1.719529 | CAGGCTCATCAGGAGGATCT | 58.280 | 55.000 | 0.00 | 0.00 | 44.22 | 2.75 |
141 | 142 | 1.619827 | CAGGCTCATCAGGAGGATCTC | 59.380 | 57.143 | 0.00 | 0.00 | 44.22 | 2.75 |
142 | 143 | 1.219980 | AGGCTCATCAGGAGGATCTCA | 59.780 | 52.381 | 0.00 | 0.00 | 44.22 | 3.27 |
143 | 144 | 2.158127 | AGGCTCATCAGGAGGATCTCAT | 60.158 | 50.000 | 0.00 | 0.00 | 44.22 | 2.90 |
144 | 145 | 2.234414 | GGCTCATCAGGAGGATCTCATC | 59.766 | 54.545 | 0.00 | 0.00 | 44.22 | 2.92 |
145 | 146 | 3.167485 | GCTCATCAGGAGGATCTCATCT | 58.833 | 50.000 | 0.00 | 0.00 | 44.22 | 2.90 |
146 | 147 | 3.194116 | GCTCATCAGGAGGATCTCATCTC | 59.806 | 52.174 | 0.00 | 0.00 | 44.22 | 2.75 |
147 | 148 | 3.419943 | TCATCAGGAGGATCTCATCTCG | 58.580 | 50.000 | 0.00 | 0.00 | 32.57 | 4.04 |
148 | 149 | 1.614996 | TCAGGAGGATCTCATCTCGC | 58.385 | 55.000 | 0.00 | 0.00 | 33.73 | 5.03 |
149 | 150 | 1.144708 | TCAGGAGGATCTCATCTCGCT | 59.855 | 52.381 | 0.00 | 0.00 | 33.73 | 4.93 |
150 | 151 | 2.373502 | TCAGGAGGATCTCATCTCGCTA | 59.626 | 50.000 | 0.00 | 0.00 | 33.73 | 4.26 |
151 | 152 | 3.010027 | TCAGGAGGATCTCATCTCGCTAT | 59.990 | 47.826 | 0.00 | 0.00 | 33.73 | 2.97 |
152 | 153 | 3.378112 | CAGGAGGATCTCATCTCGCTATC | 59.622 | 52.174 | 0.00 | 0.00 | 33.73 | 2.08 |
153 | 154 | 3.266772 | AGGAGGATCTCATCTCGCTATCT | 59.733 | 47.826 | 0.00 | 0.00 | 33.73 | 1.98 |
154 | 155 | 4.473196 | AGGAGGATCTCATCTCGCTATCTA | 59.527 | 45.833 | 0.00 | 0.00 | 33.73 | 1.98 |
155 | 156 | 5.132648 | AGGAGGATCTCATCTCGCTATCTAT | 59.867 | 44.000 | 0.00 | 0.00 | 33.73 | 1.98 |
156 | 157 | 5.239306 | GGAGGATCTCATCTCGCTATCTATG | 59.761 | 48.000 | 0.00 | 0.00 | 33.73 | 2.23 |
157 | 158 | 4.580167 | AGGATCTCATCTCGCTATCTATGC | 59.420 | 45.833 | 0.00 | 0.00 | 0.00 | 3.14 |
158 | 159 | 4.580167 | GGATCTCATCTCGCTATCTATGCT | 59.420 | 45.833 | 0.00 | 0.00 | 0.00 | 3.79 |
159 | 160 | 5.067674 | GGATCTCATCTCGCTATCTATGCTT | 59.932 | 44.000 | 0.00 | 0.00 | 0.00 | 3.91 |
160 | 161 | 5.973899 | TCTCATCTCGCTATCTATGCTTT | 57.026 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
161 | 162 | 7.201776 | GGATCTCATCTCGCTATCTATGCTTTA | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 1.85 |
162 | 163 | 6.847400 | TCTCATCTCGCTATCTATGCTTTAC | 58.153 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
163 | 164 | 6.657117 | TCTCATCTCGCTATCTATGCTTTACT | 59.343 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
164 | 165 | 7.175816 | TCTCATCTCGCTATCTATGCTTTACTT | 59.824 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
165 | 166 | 7.661968 | TCATCTCGCTATCTATGCTTTACTTT | 58.338 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
166 | 167 | 8.793592 | TCATCTCGCTATCTATGCTTTACTTTA | 58.206 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
167 | 168 | 9.579768 | CATCTCGCTATCTATGCTTTACTTTAT | 57.420 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
168 | 169 | 9.796120 | ATCTCGCTATCTATGCTTTACTTTATC | 57.204 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
169 | 170 | 8.244802 | TCTCGCTATCTATGCTTTACTTTATCC | 58.755 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
170 | 171 | 7.027760 | TCGCTATCTATGCTTTACTTTATCCG | 58.972 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
171 | 172 | 6.237595 | CGCTATCTATGCTTTACTTTATCCGC | 60.238 | 42.308 | 0.00 | 0.00 | 0.00 | 5.54 |
172 | 173 | 6.036191 | GCTATCTATGCTTTACTTTATCCGCC | 59.964 | 42.308 | 0.00 | 0.00 | 0.00 | 6.13 |
173 | 174 | 4.638304 | TCTATGCTTTACTTTATCCGCCC | 58.362 | 43.478 | 0.00 | 0.00 | 0.00 | 6.13 |
174 | 175 | 2.047002 | TGCTTTACTTTATCCGCCCC | 57.953 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
175 | 176 | 1.562475 | TGCTTTACTTTATCCGCCCCT | 59.438 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
176 | 177 | 2.219458 | GCTTTACTTTATCCGCCCCTC | 58.781 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
177 | 178 | 2.847441 | CTTTACTTTATCCGCCCCTCC | 58.153 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
178 | 179 | 2.185663 | TTACTTTATCCGCCCCTCCT | 57.814 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
179 | 180 | 2.185663 | TACTTTATCCGCCCCTCCTT | 57.814 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
180 | 181 | 0.837940 | ACTTTATCCGCCCCTCCTTC | 59.162 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
181 | 182 | 0.837272 | CTTTATCCGCCCCTCCTTCA | 59.163 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
182 | 183 | 0.544697 | TTTATCCGCCCCTCCTTCAC | 59.455 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
183 | 184 | 0.619255 | TTATCCGCCCCTCCTTCACA | 60.619 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
184 | 185 | 1.335132 | TATCCGCCCCTCCTTCACAC | 61.335 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
185 | 186 | 4.410400 | CCGCCCCTCCTTCACACC | 62.410 | 72.222 | 0.00 | 0.00 | 0.00 | 4.16 |
186 | 187 | 3.322466 | CGCCCCTCCTTCACACCT | 61.322 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
255 | 257 | 5.221342 | ACCACCAATCGAATTAGCACAAAAA | 60.221 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
305 | 317 | 7.304919 | TCGCTAATCCTATACTAATCTCACG | 57.695 | 40.000 | 0.00 | 0.00 | 0.00 | 4.35 |
309 | 321 | 5.646577 | ATCCTATACTAATCTCACGCCAC | 57.353 | 43.478 | 0.00 | 0.00 | 0.00 | 5.01 |
337 | 349 | 8.850156 | CCACAAAGATCCTCTTTTAAAAAGAGA | 58.150 | 33.333 | 20.07 | 11.25 | 43.62 | 3.10 |
338 | 350 | 9.890352 | CACAAAGATCCTCTTTTAAAAAGAGAG | 57.110 | 33.333 | 18.26 | 18.26 | 43.62 | 3.20 |
339 | 351 | 9.853177 | ACAAAGATCCTCTTTTAAAAAGAGAGA | 57.147 | 29.630 | 21.18 | 17.06 | 43.62 | 3.10 |
379 | 391 | 0.548510 | AGATTTCTACAGGCAGGGGC | 59.451 | 55.000 | 0.00 | 0.00 | 40.13 | 5.80 |
401 | 413 | 4.717991 | CATCGTTTTAGCCGACATTTTCA | 58.282 | 39.130 | 0.00 | 0.00 | 37.12 | 2.69 |
489 | 512 | 0.238289 | ATGCGCGTGGACTTTTGAAG | 59.762 | 50.000 | 8.43 | 0.00 | 0.00 | 3.02 |
491 | 514 | 1.646540 | CGCGTGGACTTTTGAAGCA | 59.353 | 52.632 | 0.00 | 0.00 | 0.00 | 3.91 |
548 | 582 | 2.767505 | ACTGCCCAACTTCTAGAAACG | 58.232 | 47.619 | 6.63 | 0.00 | 0.00 | 3.60 |
561 | 595 | 4.264638 | AAACGCGGCACCAACTGC | 62.265 | 61.111 | 12.47 | 0.00 | 46.31 | 4.40 |
575 | 609 | 4.193893 | CTGCCCGCCCCATCATCA | 62.194 | 66.667 | 0.00 | 0.00 | 0.00 | 3.07 |
581 | 615 | 1.002868 | CGCCCCATCATCATCCTCC | 60.003 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
582 | 616 | 1.486997 | CGCCCCATCATCATCCTCCT | 61.487 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
584 | 618 | 0.990374 | CCCCATCATCATCCTCCTCC | 59.010 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
585 | 619 | 1.486556 | CCCCATCATCATCCTCCTCCT | 60.487 | 57.143 | 0.00 | 0.00 | 0.00 | 3.69 |
588 | 622 | 2.495004 | CCATCATCATCCTCCTCCTCCT | 60.495 | 54.545 | 0.00 | 0.00 | 0.00 | 3.69 |
592 | 626 | 0.856982 | TCATCCTCCTCCTCCTCCTC | 59.143 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
593 | 627 | 0.560193 | CATCCTCCTCCTCCTCCTCA | 59.440 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
594 | 628 | 0.560688 | ATCCTCCTCCTCCTCCTCAC | 59.439 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
595 | 629 | 0.851332 | TCCTCCTCCTCCTCCTCACA | 60.851 | 60.000 | 0.00 | 0.00 | 0.00 | 3.58 |
597 | 631 | 0.686112 | CTCCTCCTCCTCCTCACACC | 60.686 | 65.000 | 0.00 | 0.00 | 0.00 | 4.16 |
599 | 633 | 1.304547 | CTCCTCCTCCTCACACCGT | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 4.83 |
600 | 634 | 1.304217 | TCCTCCTCCTCACACCGTC | 60.304 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
601 | 635 | 2.352032 | CCTCCTCCTCACACCGTCC | 61.352 | 68.421 | 0.00 | 0.00 | 0.00 | 4.79 |
602 | 636 | 2.283676 | TCCTCCTCACACCGTCCC | 60.284 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
603 | 637 | 3.760035 | CCTCCTCACACCGTCCCG | 61.760 | 72.222 | 0.00 | 0.00 | 0.00 | 5.14 |
604 | 638 | 2.989824 | CTCCTCACACCGTCCCGT | 60.990 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
605 | 639 | 3.282745 | CTCCTCACACCGTCCCGTG | 62.283 | 68.421 | 0.00 | 0.00 | 39.75 | 4.94 |
607 | 641 | 3.991051 | CTCACACCGTCCCGTGCT | 61.991 | 66.667 | 0.00 | 0.00 | 37.25 | 4.40 |
608 | 642 | 2.598099 | TCACACCGTCCCGTGCTA | 60.598 | 61.111 | 0.00 | 0.00 | 37.25 | 3.49 |
609 | 643 | 1.945354 | CTCACACCGTCCCGTGCTAT | 61.945 | 60.000 | 0.00 | 0.00 | 37.25 | 2.97 |
610 | 644 | 0.680601 | TCACACCGTCCCGTGCTATA | 60.681 | 55.000 | 0.00 | 0.00 | 37.25 | 1.31 |
611 | 645 | 0.526954 | CACACCGTCCCGTGCTATAC | 60.527 | 60.000 | 0.00 | 0.00 | 37.25 | 1.47 |
612 | 646 | 0.682209 | ACACCGTCCCGTGCTATACT | 60.682 | 55.000 | 0.00 | 0.00 | 37.25 | 2.12 |
613 | 647 | 1.311859 | CACCGTCCCGTGCTATACTA | 58.688 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
614 | 648 | 1.002033 | CACCGTCCCGTGCTATACTAC | 60.002 | 57.143 | 0.00 | 0.00 | 0.00 | 2.73 |
615 | 649 | 1.133976 | ACCGTCCCGTGCTATACTACT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
616 | 650 | 1.534595 | CCGTCCCGTGCTATACTACTC | 59.465 | 57.143 | 0.00 | 0.00 | 0.00 | 2.59 |
617 | 651 | 1.534595 | CGTCCCGTGCTATACTACTCC | 59.465 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
618 | 652 | 2.809665 | CGTCCCGTGCTATACTACTCCT | 60.810 | 54.545 | 0.00 | 0.00 | 0.00 | 3.69 |
619 | 653 | 3.555795 | CGTCCCGTGCTATACTACTCCTA | 60.556 | 52.174 | 0.00 | 0.00 | 0.00 | 2.94 |
668 | 702 | 2.760650 | CAAAATCTCCACCCTAAAGGCC | 59.239 | 50.000 | 0.00 | 0.00 | 40.58 | 5.19 |
679 | 713 | 1.271054 | CCTAAAGGCCGGATCCTCATG | 60.271 | 57.143 | 5.05 | 0.00 | 34.82 | 3.07 |
702 | 1101 | 1.469335 | CCATCATTGCCATCCCCAGC | 61.469 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
705 | 1104 | 2.124151 | ATTGCCATCCCCAGCGAC | 60.124 | 61.111 | 0.00 | 0.00 | 0.00 | 5.19 |
740 | 1144 | 2.514803 | TCTTTGCTTCCTGGTAAAGGC | 58.485 | 47.619 | 0.00 | 0.00 | 46.92 | 4.35 |
742 | 1146 | 0.251608 | TTGCTTCCTGGTAAAGGCCC | 60.252 | 55.000 | 0.00 | 0.00 | 46.92 | 5.80 |
745 | 1158 | 3.615509 | TTCCTGGTAAAGGCCCGCG | 62.616 | 63.158 | 0.00 | 0.00 | 46.92 | 6.46 |
795 | 1209 | 4.124943 | CATCCAGCCAGCCAGCCT | 62.125 | 66.667 | 0.00 | 0.00 | 0.00 | 4.58 |
796 | 1210 | 4.124943 | ATCCAGCCAGCCAGCCTG | 62.125 | 66.667 | 0.00 | 0.00 | 41.41 | 4.85 |
893 | 1307 | 3.784412 | CGTACAAACCGCGCAGGG | 61.784 | 66.667 | 19.73 | 11.11 | 46.96 | 4.45 |
924 | 1338 | 5.243954 | CCCTCGATTTCCCTTTTCTTTTTCT | 59.756 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
928 | 1348 | 4.316205 | TTTCCCTTTTCTTTTTCTCCGC | 57.684 | 40.909 | 0.00 | 0.00 | 0.00 | 5.54 |
1005 | 1440 | 3.941188 | TAGCTAGGCGCCATGGGC | 61.941 | 66.667 | 31.54 | 24.54 | 46.75 | 5.36 |
1056 | 1491 | 4.772687 | GGCCGGGGGAAGAACGAC | 62.773 | 72.222 | 2.18 | 0.00 | 0.00 | 4.34 |
1092 | 1527 | 3.654173 | GAACCCCTACACCGTCGCC | 62.654 | 68.421 | 0.00 | 0.00 | 0.00 | 5.54 |
1530 | 1966 | 0.034337 | TCGTCCAGGTAACAAGGCAC | 59.966 | 55.000 | 0.00 | 0.00 | 41.41 | 5.01 |
1547 | 1983 | 2.154462 | GCACCTTGCTTCTCTTGCTTA | 58.846 | 47.619 | 0.00 | 0.00 | 40.96 | 3.09 |
1588 | 2024 | 7.665145 | TGCTTGCTATGCCATATATTAGTTCAA | 59.335 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
1607 | 2043 | 7.088905 | AGTTCAATCATGAGAAGAATTGTTGC | 58.911 | 34.615 | 0.09 | 0.00 | 36.78 | 4.17 |
1619 | 2055 | 5.064441 | AGAATTGTTGCCTATTGCTCAAC | 57.936 | 39.130 | 0.00 | 0.00 | 42.00 | 3.18 |
1674 | 2110 | 5.922544 | GCAGCTTTGTGTTCATGAATTTAGT | 59.077 | 36.000 | 12.12 | 0.00 | 0.00 | 2.24 |
1675 | 2111 | 7.083858 | GCAGCTTTGTGTTCATGAATTTAGTA | 58.916 | 34.615 | 12.12 | 0.00 | 0.00 | 1.82 |
1676 | 2112 | 7.756722 | GCAGCTTTGTGTTCATGAATTTAGTAT | 59.243 | 33.333 | 12.12 | 0.00 | 0.00 | 2.12 |
1810 | 2246 | 6.633668 | TTGGTTTCGTTTGTGTTAAATGTG | 57.366 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
1826 | 2262 | 1.588674 | TGTGTAACCGAACTGGCAAG | 58.411 | 50.000 | 0.00 | 0.00 | 43.94 | 4.01 |
1933 | 2370 | 6.519382 | TGCATTATTGGATTGTTTTGTGACA | 58.481 | 32.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2100 | 2537 | 3.173151 | TGGGCTATCTGTGTTCTTCAGA | 58.827 | 45.455 | 0.00 | 0.00 | 44.37 | 3.27 |
2110 | 2547 | 3.901222 | TGTGTTCTTCAGACCTGGTATGA | 59.099 | 43.478 | 19.59 | 19.59 | 31.69 | 2.15 |
2114 | 2551 | 5.248248 | TGTTCTTCAGACCTGGTATGATCAA | 59.752 | 40.000 | 23.45 | 15.95 | 33.73 | 2.57 |
2153 | 2590 | 5.935789 | TCAGTAACATACCTTTGCACCTTAC | 59.064 | 40.000 | 0.00 | 0.00 | 0.00 | 2.34 |
2239 | 2677 | 3.715628 | TTCAAGCCTCTCAAAGCAAAC | 57.284 | 42.857 | 0.00 | 0.00 | 0.00 | 2.93 |
2244 | 2682 | 5.048504 | TCAAGCCTCTCAAAGCAAACATTAG | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2516 | 3008 | 3.194755 | CCATTTTGGGCAGGTACTTAACC | 59.805 | 47.826 | 0.00 | 0.00 | 40.50 | 2.85 |
2542 | 3341 | 7.500992 | TCCTGGATTAGACTGAATGTATGTTC | 58.499 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
2560 | 3360 | 6.850752 | ATGTTCCGGGAAAATTACAAATCT | 57.149 | 33.333 | 11.82 | 0.00 | 0.00 | 2.40 |
2582 | 3382 | 8.970859 | ATCTCCTTACAAATTCCTGTTATCTG | 57.029 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
2696 | 3496 | 1.194781 | AGACCTTGTCAGGCGGATGT | 61.195 | 55.000 | 0.00 | 0.00 | 45.56 | 3.06 |
2756 | 3556 | 2.512692 | ACTTGGTGAGCATTATGGCA | 57.487 | 45.000 | 0.00 | 0.00 | 35.83 | 4.92 |
2768 | 3568 | 3.803778 | GCATTATGGCATTTCCTTTTCCG | 59.196 | 43.478 | 4.78 | 0.00 | 35.26 | 4.30 |
2820 | 3620 | 7.309621 | CCTCACTCTCATTTCAATGGTGAATTT | 60.310 | 37.037 | 9.81 | 0.00 | 43.29 | 1.82 |
2823 | 3623 | 9.132521 | CACTCTCATTTCAATGGTGAATTTTAC | 57.867 | 33.333 | 0.00 | 0.00 | 43.29 | 2.01 |
2825 | 3625 | 7.610865 | TCTCATTTCAATGGTGAATTTTACCC | 58.389 | 34.615 | 7.80 | 0.00 | 43.29 | 3.69 |
2828 | 3628 | 8.435982 | TCATTTCAATGGTGAATTTTACCCTTT | 58.564 | 29.630 | 7.80 | 0.00 | 43.29 | 3.11 |
2867 | 3714 | 4.346418 | TGTCCCTGTTAAACCAATTGCATT | 59.654 | 37.500 | 0.00 | 0.00 | 0.00 | 3.56 |
2871 | 3718 | 8.254508 | GTCCCTGTTAAACCAATTGCATTTATA | 58.745 | 33.333 | 11.67 | 6.13 | 0.00 | 0.98 |
2874 | 3721 | 9.097257 | CCTGTTAAACCAATTGCATTTATAAGG | 57.903 | 33.333 | 16.96 | 16.96 | 0.00 | 2.69 |
3054 | 3901 | 8.786826 | TTAAGGGTAAGACTCATTACATGTTG | 57.213 | 34.615 | 2.30 | 0.00 | 37.38 | 3.33 |
3303 | 4156 | 1.349067 | AGGCTGGACTCCGTAAACTT | 58.651 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3309 | 4162 | 4.324267 | CTGGACTCCGTAAACTTGGAAAT | 58.676 | 43.478 | 0.00 | 0.00 | 32.89 | 2.17 |
3459 | 4316 | 4.079253 | AGGCTGATGTTGATAAAAACGGT | 58.921 | 39.130 | 0.00 | 0.00 | 32.47 | 4.83 |
3537 | 4394 | 5.796424 | ATGATGAACATATCCAAAAGGCC | 57.204 | 39.130 | 0.00 | 0.00 | 37.46 | 5.19 |
3549 | 4406 | 4.998051 | TCCAAAAGGCCTTCTCATACTTT | 58.002 | 39.130 | 20.79 | 3.40 | 33.19 | 2.66 |
3558 | 4415 | 4.393371 | GCCTTCTCATACTTTGACCAAGAC | 59.607 | 45.833 | 0.00 | 0.00 | 36.21 | 3.01 |
3588 | 4445 | 6.265649 | GTGGGTACATAGAGATTGAAGAGCTA | 59.734 | 42.308 | 0.00 | 0.00 | 0.00 | 3.32 |
3747 | 4604 | 6.988580 | TCAGAAGTCAGAACATATGCTAATGG | 59.011 | 38.462 | 1.58 | 0.00 | 0.00 | 3.16 |
3897 | 4764 | 9.914131 | CTTGTTCTTTTAAAGGATTCCCTAAAG | 57.086 | 33.333 | 4.77 | 4.90 | 43.48 | 1.85 |
3899 | 4766 | 8.856103 | TGTTCTTTTAAAGGATTCCCTAAAGTG | 58.144 | 33.333 | 4.77 | 2.57 | 43.48 | 3.16 |
3926 | 4793 | 4.921515 | GCAATTGCTATCATTGCACCTATG | 59.078 | 41.667 | 23.21 | 0.00 | 46.96 | 2.23 |
3975 | 4842 | 6.321435 | TCATACCTGACAGTCAATGGTAGTAG | 59.679 | 42.308 | 20.75 | 14.99 | 32.79 | 2.57 |
3981 | 4848 | 4.157246 | ACAGTCAATGGTAGTAGTGGACA | 58.843 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
3996 | 4863 | 3.945285 | AGTGGACACCATAAAATAAGCGG | 59.055 | 43.478 | 0.00 | 0.00 | 35.28 | 5.52 |
4091 | 5119 | 5.460646 | CAACATGTATGACTTGTTCAACCC | 58.539 | 41.667 | 0.00 | 0.00 | 42.29 | 4.11 |
4164 | 5194 | 4.735662 | TGCAAAGTAAACGACATACCAC | 57.264 | 40.909 | 0.00 | 0.00 | 0.00 | 4.16 |
4189 | 5227 | 4.637534 | CAGACCAGGTCACAAGGATAAATG | 59.362 | 45.833 | 22.31 | 2.61 | 34.60 | 2.32 |
4254 | 5293 | 3.018423 | AGCTTGACTTGTTCAAACCCT | 57.982 | 42.857 | 0.00 | 0.00 | 43.90 | 4.34 |
4471 | 5510 | 1.028905 | AGTAGACCGAGCAGAGATGC | 58.971 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
4477 | 5516 | 1.288350 | CCGAGCAGAGATGCAAGAAG | 58.712 | 55.000 | 2.73 | 0.00 | 37.25 | 2.85 |
4544 | 5583 | 1.269309 | GCTACTGATCGTGATCGCCTT | 60.269 | 52.381 | 0.00 | 0.00 | 40.63 | 4.35 |
4613 | 5652 | 2.670251 | CGCTGTGCCGGGGTTTTA | 60.670 | 61.111 | 2.18 | 0.00 | 0.00 | 1.52 |
4690 | 5752 | 0.389948 | ACCACTCGATTCTTGGCGTC | 60.390 | 55.000 | 0.00 | 0.00 | 33.25 | 5.19 |
4784 | 5846 | 3.942115 | GGAAATGCTTAACAGAGGAGTCC | 59.058 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
4802 | 5864 | 1.277273 | TCCTGGTCTTGCACTCATCAG | 59.723 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
4803 | 5865 | 1.085091 | CTGGTCTTGCACTCATCAGC | 58.915 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
4804 | 5866 | 0.321919 | TGGTCTTGCACTCATCAGCC | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4805 | 5867 | 0.035630 | GGTCTTGCACTCATCAGCCT | 60.036 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
4806 | 5868 | 1.085091 | GTCTTGCACTCATCAGCCTG | 58.915 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4807 | 5869 | 0.689055 | TCTTGCACTCATCAGCCTGT | 59.311 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4808 | 5870 | 0.803117 | CTTGCACTCATCAGCCTGTG | 59.197 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
4809 | 5871 | 3.185155 | GCACTCATCAGCCTGTGC | 58.815 | 61.111 | 0.00 | 0.00 | 46.66 | 4.57 |
4810 | 5872 | 2.747822 | GCACTCATCAGCCTGTGCG | 61.748 | 63.158 | 0.00 | 0.00 | 44.60 | 5.34 |
4811 | 5873 | 2.435586 | ACTCATCAGCCTGTGCGC | 60.436 | 61.111 | 0.00 | 0.00 | 44.33 | 6.09 |
4812 | 5874 | 2.125229 | CTCATCAGCCTGTGCGCT | 60.125 | 61.111 | 9.73 | 0.00 | 44.33 | 5.92 |
4818 | 5880 | 4.326507 | AGCCTGTGCGCTGAAGCT | 62.327 | 61.111 | 9.73 | 9.45 | 44.33 | 3.74 |
4819 | 5881 | 3.360340 | GCCTGTGCGCTGAAGCTT | 61.360 | 61.111 | 9.73 | 0.00 | 39.32 | 3.74 |
4820 | 5882 | 2.866028 | CCTGTGCGCTGAAGCTTC | 59.134 | 61.111 | 19.89 | 19.89 | 39.32 | 3.86 |
4859 | 5956 | 1.282875 | GAGTGCTGACGGTTTTGCC | 59.717 | 57.895 | 0.00 | 0.00 | 0.00 | 4.52 |
4917 | 6015 | 0.590481 | GTCGGACAAACACGGCAAAC | 60.590 | 55.000 | 2.62 | 0.00 | 34.37 | 2.93 |
4936 | 6034 | 1.002868 | AGATGCAAGCTTCTGCCGT | 60.003 | 52.632 | 7.90 | 0.00 | 41.90 | 5.68 |
4937 | 6035 | 1.136147 | GATGCAAGCTTCTGCCGTG | 59.864 | 57.895 | 7.90 | 0.00 | 41.90 | 4.94 |
4938 | 6036 | 1.300971 | GATGCAAGCTTCTGCCGTGA | 61.301 | 55.000 | 7.90 | 0.00 | 41.90 | 4.35 |
5108 | 6365 | 5.086058 | CGTACGCTCAGTTTGCAAAATAAT | 58.914 | 37.500 | 14.67 | 0.00 | 0.00 | 1.28 |
5129 | 6386 | 8.692682 | ATAATCCTTCCTCCTCTTGCTAATAT | 57.307 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
5130 | 6387 | 5.815233 | TCCTTCCTCCTCTTGCTAATATG | 57.185 | 43.478 | 0.00 | 0.00 | 0.00 | 1.78 |
5131 | 6388 | 5.219739 | TCCTTCCTCCTCTTGCTAATATGT | 58.780 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
5132 | 6389 | 6.382087 | TCCTTCCTCCTCTTGCTAATATGTA | 58.618 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
5136 | 6393 | 6.373759 | TCCTCCTCTTGCTAATATGTACTGA | 58.626 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5142 | 6399 | 9.202273 | CCTCTTGCTAATATGTACTGAAGAATC | 57.798 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
5147 | 6404 | 9.973450 | TGCTAATATGTACTGAAGAATCTTCTC | 57.027 | 33.333 | 21.89 | 11.25 | 36.28 | 2.87 |
5157 | 6414 | 3.742433 | AGAATCTTCTCGTATGCCCAG | 57.258 | 47.619 | 0.00 | 0.00 | 29.94 | 4.45 |
5160 | 6417 | 4.038162 | AGAATCTTCTCGTATGCCCAGTAC | 59.962 | 45.833 | 0.00 | 0.00 | 29.94 | 2.73 |
5231 | 6488 | 2.871427 | GCTTGCCTCCGATAACGCG | 61.871 | 63.158 | 3.53 | 3.53 | 38.29 | 6.01 |
5256 | 6513 | 1.911766 | GGAGGAGTCGGTGGTTGGA | 60.912 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
5371 | 6640 | 0.443869 | CCGTACACATCTTGCTGCAC | 59.556 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
5402 | 6682 | 1.299089 | GGCCACGTGCTTGTTTGAC | 60.299 | 57.895 | 10.91 | 0.00 | 40.92 | 3.18 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 1.034838 | CAGTCCTCCTCTGACCGGAG | 61.035 | 65.000 | 9.46 | 6.08 | 46.11 | 4.63 |
18 | 19 | 1.000771 | CAGTCCTCCTCTGACCGGA | 60.001 | 63.158 | 9.46 | 0.00 | 35.20 | 5.14 |
19 | 20 | 2.055042 | CCAGTCCTCCTCTGACCGG | 61.055 | 68.421 | 0.00 | 0.00 | 35.20 | 5.28 |
20 | 21 | 1.000771 | TCCAGTCCTCCTCTGACCG | 60.001 | 63.158 | 0.00 | 0.00 | 35.20 | 4.79 |
21 | 22 | 0.333312 | TCTCCAGTCCTCCTCTGACC | 59.667 | 60.000 | 0.00 | 0.00 | 35.20 | 4.02 |
22 | 23 | 2.031120 | CATCTCCAGTCCTCCTCTGAC | 58.969 | 57.143 | 0.00 | 0.00 | 35.20 | 3.51 |
23 | 24 | 1.925959 | TCATCTCCAGTCCTCCTCTGA | 59.074 | 52.381 | 0.00 | 0.00 | 35.20 | 3.27 |
24 | 25 | 2.091939 | TCTCATCTCCAGTCCTCCTCTG | 60.092 | 54.545 | 0.00 | 0.00 | 0.00 | 3.35 |
25 | 26 | 2.213310 | TCTCATCTCCAGTCCTCCTCT | 58.787 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
26 | 27 | 2.746279 | TCTCATCTCCAGTCCTCCTC | 57.254 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
27 | 28 | 3.704545 | AATCTCATCTCCAGTCCTCCT | 57.295 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
28 | 29 | 5.365314 | AGTTTAATCTCATCTCCAGTCCTCC | 59.635 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
29 | 30 | 6.478512 | AGTTTAATCTCATCTCCAGTCCTC | 57.521 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
30 | 31 | 6.325286 | GGTAGTTTAATCTCATCTCCAGTCCT | 59.675 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
31 | 32 | 6.517605 | GGTAGTTTAATCTCATCTCCAGTCC | 58.482 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
32 | 33 | 6.210078 | CGGTAGTTTAATCTCATCTCCAGTC | 58.790 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
33 | 34 | 5.452077 | GCGGTAGTTTAATCTCATCTCCAGT | 60.452 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
34 | 35 | 4.985409 | GCGGTAGTTTAATCTCATCTCCAG | 59.015 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
35 | 36 | 4.649674 | AGCGGTAGTTTAATCTCATCTCCA | 59.350 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
36 | 37 | 5.203060 | AGCGGTAGTTTAATCTCATCTCC | 57.797 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
37 | 38 | 7.204496 | TCTAGCGGTAGTTTAATCTCATCTC | 57.796 | 40.000 | 20.32 | 0.00 | 0.00 | 2.75 |
38 | 39 | 7.584122 | TTCTAGCGGTAGTTTAATCTCATCT | 57.416 | 36.000 | 20.32 | 0.00 | 0.00 | 2.90 |
39 | 40 | 9.909644 | TTATTCTAGCGGTAGTTTAATCTCATC | 57.090 | 33.333 | 20.32 | 0.00 | 0.00 | 2.92 |
41 | 42 | 9.909644 | GATTATTCTAGCGGTAGTTTAATCTCA | 57.090 | 33.333 | 28.23 | 12.84 | 33.72 | 3.27 |
42 | 43 | 9.909644 | TGATTATTCTAGCGGTAGTTTAATCTC | 57.090 | 33.333 | 31.06 | 21.40 | 35.28 | 2.75 |
43 | 44 | 9.915629 | CTGATTATTCTAGCGGTAGTTTAATCT | 57.084 | 33.333 | 31.06 | 17.24 | 35.28 | 2.40 |
44 | 45 | 9.909644 | TCTGATTATTCTAGCGGTAGTTTAATC | 57.090 | 33.333 | 28.48 | 28.48 | 35.09 | 1.75 |
45 | 46 | 9.694137 | GTCTGATTATTCTAGCGGTAGTTTAAT | 57.306 | 33.333 | 20.32 | 20.72 | 0.00 | 1.40 |
46 | 47 | 7.859377 | CGTCTGATTATTCTAGCGGTAGTTTAA | 59.141 | 37.037 | 20.32 | 17.66 | 0.00 | 1.52 |
47 | 48 | 7.227314 | TCGTCTGATTATTCTAGCGGTAGTTTA | 59.773 | 37.037 | 20.32 | 10.92 | 0.00 | 2.01 |
48 | 49 | 6.039047 | TCGTCTGATTATTCTAGCGGTAGTTT | 59.961 | 38.462 | 20.32 | 11.83 | 0.00 | 2.66 |
49 | 50 | 5.530171 | TCGTCTGATTATTCTAGCGGTAGTT | 59.470 | 40.000 | 20.32 | 12.15 | 0.00 | 2.24 |
50 | 51 | 5.049543 | GTCGTCTGATTATTCTAGCGGTAGT | 60.050 | 44.000 | 20.32 | 5.81 | 0.00 | 2.73 |
51 | 52 | 5.179742 | AGTCGTCTGATTATTCTAGCGGTAG | 59.820 | 44.000 | 15.51 | 15.51 | 0.00 | 3.18 |
52 | 53 | 5.061853 | AGTCGTCTGATTATTCTAGCGGTA | 58.938 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
53 | 54 | 3.884091 | AGTCGTCTGATTATTCTAGCGGT | 59.116 | 43.478 | 0.00 | 0.00 | 0.00 | 5.68 |
54 | 55 | 4.468643 | GAGTCGTCTGATTATTCTAGCGG | 58.531 | 47.826 | 0.00 | 0.00 | 0.00 | 5.52 |
55 | 56 | 4.145276 | CGAGTCGTCTGATTATTCTAGCG | 58.855 | 47.826 | 3.82 | 0.00 | 0.00 | 4.26 |
56 | 57 | 5.098218 | ACGAGTCGTCTGATTATTCTAGC | 57.902 | 43.478 | 13.56 | 0.00 | 33.69 | 3.42 |
70 | 71 | 0.952497 | TCTTGCTACGGACGAGTCGT | 60.952 | 55.000 | 20.02 | 20.02 | 45.10 | 4.34 |
71 | 72 | 0.377554 | ATCTTGCTACGGACGAGTCG | 59.622 | 55.000 | 11.85 | 11.85 | 0.00 | 4.18 |
72 | 73 | 2.563471 | AATCTTGCTACGGACGAGTC | 57.437 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
73 | 74 | 3.314541 | AAAATCTTGCTACGGACGAGT | 57.685 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
74 | 75 | 5.050972 | GGATAAAAATCTTGCTACGGACGAG | 60.051 | 44.000 | 0.00 | 0.00 | 0.00 | 4.18 |
75 | 76 | 4.807304 | GGATAAAAATCTTGCTACGGACGA | 59.193 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
76 | 77 | 4.317839 | CGGATAAAAATCTTGCTACGGACG | 60.318 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
77 | 78 | 4.552184 | GCGGATAAAAATCTTGCTACGGAC | 60.552 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
78 | 79 | 3.558418 | GCGGATAAAAATCTTGCTACGGA | 59.442 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
79 | 80 | 3.603857 | CGCGGATAAAAATCTTGCTACGG | 60.604 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
80 | 81 | 3.244345 | TCGCGGATAAAAATCTTGCTACG | 59.756 | 43.478 | 6.13 | 0.00 | 0.00 | 3.51 |
81 | 82 | 4.789095 | TCGCGGATAAAAATCTTGCTAC | 57.211 | 40.909 | 6.13 | 0.00 | 0.00 | 3.58 |
82 | 83 | 4.873827 | AGTTCGCGGATAAAAATCTTGCTA | 59.126 | 37.500 | 6.13 | 0.00 | 0.00 | 3.49 |
83 | 84 | 3.689649 | AGTTCGCGGATAAAAATCTTGCT | 59.310 | 39.130 | 6.13 | 0.00 | 0.00 | 3.91 |
84 | 85 | 3.786048 | CAGTTCGCGGATAAAAATCTTGC | 59.214 | 43.478 | 6.13 | 0.00 | 0.00 | 4.01 |
85 | 86 | 3.786048 | GCAGTTCGCGGATAAAAATCTTG | 59.214 | 43.478 | 6.13 | 0.00 | 0.00 | 3.02 |
86 | 87 | 4.016113 | GCAGTTCGCGGATAAAAATCTT | 57.984 | 40.909 | 6.13 | 0.00 | 0.00 | 2.40 |
87 | 88 | 3.675467 | GCAGTTCGCGGATAAAAATCT | 57.325 | 42.857 | 6.13 | 0.00 | 0.00 | 2.40 |
99 | 100 | 2.167918 | GTTCGTCACGCAGTTCGC | 59.832 | 61.111 | 0.00 | 0.00 | 41.61 | 4.70 |
100 | 101 | 2.459904 | CGTTCGTCACGCAGTTCG | 59.540 | 61.111 | 0.00 | 0.00 | 41.61 | 3.95 |
112 | 113 | 4.473520 | ATGAGCCTGCCCCGTTCG | 62.474 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
113 | 114 | 2.514824 | GATGAGCCTGCCCCGTTC | 60.515 | 66.667 | 0.00 | 0.00 | 0.00 | 3.95 |
114 | 115 | 3.329889 | TGATGAGCCTGCCCCGTT | 61.330 | 61.111 | 0.00 | 0.00 | 0.00 | 4.44 |
115 | 116 | 3.790437 | CTGATGAGCCTGCCCCGT | 61.790 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
116 | 117 | 4.559063 | CCTGATGAGCCTGCCCCG | 62.559 | 72.222 | 0.00 | 0.00 | 0.00 | 5.73 |
117 | 118 | 3.092511 | TCCTGATGAGCCTGCCCC | 61.093 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
118 | 119 | 2.509916 | CTCCTGATGAGCCTGCCC | 59.490 | 66.667 | 0.00 | 0.00 | 33.47 | 5.36 |
119 | 120 | 1.417288 | ATCCTCCTGATGAGCCTGCC | 61.417 | 60.000 | 0.00 | 0.00 | 39.98 | 4.85 |
120 | 121 | 0.035176 | GATCCTCCTGATGAGCCTGC | 59.965 | 60.000 | 0.00 | 0.00 | 39.98 | 4.85 |
121 | 122 | 1.619827 | GAGATCCTCCTGATGAGCCTG | 59.380 | 57.143 | 0.00 | 0.00 | 39.98 | 4.85 |
122 | 123 | 1.219980 | TGAGATCCTCCTGATGAGCCT | 59.780 | 52.381 | 0.00 | 0.00 | 39.98 | 4.58 |
123 | 124 | 1.714541 | TGAGATCCTCCTGATGAGCC | 58.285 | 55.000 | 0.00 | 0.00 | 39.98 | 4.70 |
124 | 125 | 3.167485 | AGATGAGATCCTCCTGATGAGC | 58.833 | 50.000 | 0.00 | 0.00 | 39.98 | 4.26 |
125 | 126 | 3.441222 | CGAGATGAGATCCTCCTGATGAG | 59.559 | 52.174 | 0.00 | 0.00 | 41.07 | 2.90 |
126 | 127 | 3.419943 | CGAGATGAGATCCTCCTGATGA | 58.580 | 50.000 | 0.00 | 0.00 | 32.41 | 2.92 |
127 | 128 | 2.094597 | GCGAGATGAGATCCTCCTGATG | 60.095 | 54.545 | 0.00 | 0.00 | 32.41 | 3.07 |
128 | 129 | 2.170166 | GCGAGATGAGATCCTCCTGAT | 58.830 | 52.381 | 0.00 | 0.00 | 36.01 | 2.90 |
129 | 130 | 1.144708 | AGCGAGATGAGATCCTCCTGA | 59.855 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
130 | 131 | 1.619654 | AGCGAGATGAGATCCTCCTG | 58.380 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
131 | 132 | 3.266772 | AGATAGCGAGATGAGATCCTCCT | 59.733 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
132 | 133 | 3.620488 | AGATAGCGAGATGAGATCCTCC | 58.380 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
133 | 134 | 5.277974 | GCATAGATAGCGAGATGAGATCCTC | 60.278 | 48.000 | 0.00 | 0.00 | 0.00 | 3.71 |
134 | 135 | 4.580167 | GCATAGATAGCGAGATGAGATCCT | 59.420 | 45.833 | 0.00 | 0.00 | 0.00 | 3.24 |
135 | 136 | 4.580167 | AGCATAGATAGCGAGATGAGATCC | 59.420 | 45.833 | 0.00 | 0.00 | 37.01 | 3.36 |
136 | 137 | 5.756195 | AGCATAGATAGCGAGATGAGATC | 57.244 | 43.478 | 0.00 | 0.00 | 37.01 | 2.75 |
137 | 138 | 6.528537 | AAAGCATAGATAGCGAGATGAGAT | 57.471 | 37.500 | 0.00 | 0.00 | 37.01 | 2.75 |
138 | 139 | 5.973899 | AAAGCATAGATAGCGAGATGAGA | 57.026 | 39.130 | 0.00 | 0.00 | 37.01 | 3.27 |
139 | 140 | 6.851609 | AGTAAAGCATAGATAGCGAGATGAG | 58.148 | 40.000 | 0.00 | 0.00 | 37.01 | 2.90 |
140 | 141 | 6.825944 | AGTAAAGCATAGATAGCGAGATGA | 57.174 | 37.500 | 0.00 | 0.00 | 37.01 | 2.92 |
141 | 142 | 7.881643 | AAAGTAAAGCATAGATAGCGAGATG | 57.118 | 36.000 | 0.00 | 0.00 | 37.01 | 2.90 |
142 | 143 | 9.796120 | GATAAAGTAAAGCATAGATAGCGAGAT | 57.204 | 33.333 | 0.00 | 0.00 | 37.01 | 2.75 |
143 | 144 | 8.244802 | GGATAAAGTAAAGCATAGATAGCGAGA | 58.755 | 37.037 | 0.00 | 0.00 | 37.01 | 4.04 |
144 | 145 | 7.219154 | CGGATAAAGTAAAGCATAGATAGCGAG | 59.781 | 40.741 | 0.00 | 0.00 | 37.01 | 5.03 |
145 | 146 | 7.027760 | CGGATAAAGTAAAGCATAGATAGCGA | 58.972 | 38.462 | 0.00 | 0.00 | 37.01 | 4.93 |
146 | 147 | 6.237595 | GCGGATAAAGTAAAGCATAGATAGCG | 60.238 | 42.308 | 0.00 | 0.00 | 37.01 | 4.26 |
147 | 148 | 6.036191 | GGCGGATAAAGTAAAGCATAGATAGC | 59.964 | 42.308 | 0.00 | 0.00 | 0.00 | 2.97 |
148 | 149 | 6.535508 | GGGCGGATAAAGTAAAGCATAGATAG | 59.464 | 42.308 | 0.00 | 0.00 | 0.00 | 2.08 |
149 | 150 | 6.403878 | GGGCGGATAAAGTAAAGCATAGATA | 58.596 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
150 | 151 | 5.246307 | GGGCGGATAAAGTAAAGCATAGAT | 58.754 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
151 | 152 | 4.504340 | GGGGCGGATAAAGTAAAGCATAGA | 60.504 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
152 | 153 | 3.751698 | GGGGCGGATAAAGTAAAGCATAG | 59.248 | 47.826 | 0.00 | 0.00 | 0.00 | 2.23 |
153 | 154 | 3.393278 | AGGGGCGGATAAAGTAAAGCATA | 59.607 | 43.478 | 0.00 | 0.00 | 0.00 | 3.14 |
154 | 155 | 2.174854 | AGGGGCGGATAAAGTAAAGCAT | 59.825 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
155 | 156 | 1.562475 | AGGGGCGGATAAAGTAAAGCA | 59.438 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
156 | 157 | 2.219458 | GAGGGGCGGATAAAGTAAAGC | 58.781 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
157 | 158 | 2.438392 | AGGAGGGGCGGATAAAGTAAAG | 59.562 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
158 | 159 | 2.484602 | AGGAGGGGCGGATAAAGTAAA | 58.515 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
159 | 160 | 2.185663 | AGGAGGGGCGGATAAAGTAA | 57.814 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
160 | 161 | 2.044758 | GAAGGAGGGGCGGATAAAGTA | 58.955 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
161 | 162 | 0.837940 | GAAGGAGGGGCGGATAAAGT | 59.162 | 55.000 | 0.00 | 0.00 | 0.00 | 2.66 |
162 | 163 | 0.837272 | TGAAGGAGGGGCGGATAAAG | 59.163 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 |
163 | 164 | 0.544697 | GTGAAGGAGGGGCGGATAAA | 59.455 | 55.000 | 0.00 | 0.00 | 0.00 | 1.40 |
164 | 165 | 0.619255 | TGTGAAGGAGGGGCGGATAA | 60.619 | 55.000 | 0.00 | 0.00 | 0.00 | 1.75 |
165 | 166 | 1.002403 | TGTGAAGGAGGGGCGGATA | 59.998 | 57.895 | 0.00 | 0.00 | 0.00 | 2.59 |
166 | 167 | 2.285368 | TGTGAAGGAGGGGCGGAT | 60.285 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
167 | 168 | 3.319198 | GTGTGAAGGAGGGGCGGA | 61.319 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
168 | 169 | 4.410400 | GGTGTGAAGGAGGGGCGG | 62.410 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
169 | 170 | 1.338136 | ATAGGTGTGAAGGAGGGGCG | 61.338 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
170 | 171 | 0.181350 | CATAGGTGTGAAGGAGGGGC | 59.819 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
171 | 172 | 0.181350 | GCATAGGTGTGAAGGAGGGG | 59.819 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
172 | 173 | 1.207791 | AGCATAGGTGTGAAGGAGGG | 58.792 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
173 | 174 | 3.356529 | AAAGCATAGGTGTGAAGGAGG | 57.643 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
174 | 175 | 5.091261 | AGTAAAGCATAGGTGTGAAGGAG | 57.909 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
175 | 176 | 5.499004 | AAGTAAAGCATAGGTGTGAAGGA | 57.501 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
176 | 177 | 7.012421 | GGATAAAGTAAAGCATAGGTGTGAAGG | 59.988 | 40.741 | 0.00 | 0.00 | 0.00 | 3.46 |
177 | 178 | 7.770897 | AGGATAAAGTAAAGCATAGGTGTGAAG | 59.229 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
178 | 179 | 7.630082 | AGGATAAAGTAAAGCATAGGTGTGAA | 58.370 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
179 | 180 | 7.195374 | AGGATAAAGTAAAGCATAGGTGTGA | 57.805 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
180 | 181 | 7.552687 | TGAAGGATAAAGTAAAGCATAGGTGTG | 59.447 | 37.037 | 0.00 | 0.00 | 0.00 | 3.82 |
181 | 182 | 7.630082 | TGAAGGATAAAGTAAAGCATAGGTGT | 58.370 | 34.615 | 0.00 | 0.00 | 0.00 | 4.16 |
182 | 183 | 8.506168 | TTGAAGGATAAAGTAAAGCATAGGTG | 57.494 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
183 | 184 | 8.329502 | ACTTGAAGGATAAAGTAAAGCATAGGT | 58.670 | 33.333 | 0.00 | 0.00 | 34.90 | 3.08 |
184 | 185 | 8.738645 | ACTTGAAGGATAAAGTAAAGCATAGG | 57.261 | 34.615 | 0.00 | 0.00 | 34.90 | 2.57 |
185 | 186 | 8.831550 | GGACTTGAAGGATAAAGTAAAGCATAG | 58.168 | 37.037 | 0.00 | 0.00 | 36.77 | 2.23 |
186 | 187 | 8.325787 | TGGACTTGAAGGATAAAGTAAAGCATA | 58.674 | 33.333 | 0.00 | 0.00 | 36.77 | 3.14 |
255 | 257 | 4.622740 | GTGCTGTTTTATAGTACGACCGTT | 59.377 | 41.667 | 0.00 | 0.00 | 0.00 | 4.44 |
256 | 258 | 4.168760 | GTGCTGTTTTATAGTACGACCGT | 58.831 | 43.478 | 0.00 | 0.00 | 0.00 | 4.83 |
264 | 266 | 2.236395 | AGCGAGGGTGCTGTTTTATAGT | 59.764 | 45.455 | 0.00 | 0.00 | 45.28 | 2.12 |
305 | 317 | 1.743996 | GAGGATCTTTGTGGAGTGGC | 58.256 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
356 | 368 | 4.089361 | CCCCTGCCTGTAGAAATCTTTTT | 58.911 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
357 | 369 | 3.701664 | CCCCTGCCTGTAGAAATCTTTT | 58.298 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
358 | 370 | 2.621668 | GCCCCTGCCTGTAGAAATCTTT | 60.622 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
359 | 371 | 1.064389 | GCCCCTGCCTGTAGAAATCTT | 60.064 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
379 | 391 | 4.717991 | TGAAAATGTCGGCTAAAACGATG | 58.282 | 39.130 | 0.00 | 0.00 | 42.82 | 3.84 |
401 | 413 | 9.462606 | AATGCTAGCTTTAGTGGTTTATAACTT | 57.537 | 29.630 | 17.23 | 0.00 | 0.00 | 2.66 |
430 | 442 | 8.896744 | CATGTTCTGATGTTTCCACACTATAAT | 58.103 | 33.333 | 0.00 | 0.00 | 35.03 | 1.28 |
431 | 443 | 7.336679 | CCATGTTCTGATGTTTCCACACTATAA | 59.663 | 37.037 | 0.00 | 0.00 | 35.03 | 0.98 |
441 | 453 | 3.444742 | TCCATGCCATGTTCTGATGTTTC | 59.555 | 43.478 | 3.63 | 0.00 | 0.00 | 2.78 |
443 | 455 | 3.090210 | TCCATGCCATGTTCTGATGTT | 57.910 | 42.857 | 3.63 | 0.00 | 0.00 | 2.71 |
561 | 595 | 2.034687 | GGATGATGATGGGGCGGG | 59.965 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
562 | 596 | 1.002868 | GAGGATGATGATGGGGCGG | 60.003 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
563 | 597 | 1.002868 | GGAGGATGATGATGGGGCG | 60.003 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
564 | 598 | 0.327591 | GAGGAGGATGATGATGGGGC | 59.672 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
575 | 609 | 0.560688 | GTGAGGAGGAGGAGGAGGAT | 59.439 | 60.000 | 0.00 | 0.00 | 0.00 | 3.24 |
581 | 615 | 1.304547 | ACGGTGTGAGGAGGAGGAG | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
582 | 616 | 1.304217 | GACGGTGTGAGGAGGAGGA | 60.304 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
584 | 618 | 2.352032 | GGGACGGTGTGAGGAGGAG | 61.352 | 68.421 | 0.00 | 0.00 | 0.00 | 3.69 |
585 | 619 | 2.283676 | GGGACGGTGTGAGGAGGA | 60.284 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
599 | 633 | 3.649981 | ACTAGGAGTAGTATAGCACGGGA | 59.350 | 47.826 | 0.00 | 0.00 | 37.76 | 5.14 |
600 | 634 | 4.018484 | ACTAGGAGTAGTATAGCACGGG | 57.982 | 50.000 | 0.00 | 0.00 | 37.76 | 5.28 |
601 | 635 | 6.709846 | AGTTAACTAGGAGTAGTATAGCACGG | 59.290 | 42.308 | 6.26 | 0.00 | 38.66 | 4.94 |
602 | 636 | 7.727331 | AGTTAACTAGGAGTAGTATAGCACG | 57.273 | 40.000 | 6.26 | 0.00 | 38.66 | 5.34 |
607 | 641 | 9.868160 | GGGGTTAAGTTAACTAGGAGTAGTATA | 57.132 | 37.037 | 21.91 | 0.00 | 38.66 | 1.47 |
608 | 642 | 8.573097 | AGGGGTTAAGTTAACTAGGAGTAGTAT | 58.427 | 37.037 | 21.91 | 0.00 | 38.66 | 2.12 |
609 | 643 | 7.944176 | AGGGGTTAAGTTAACTAGGAGTAGTA | 58.056 | 38.462 | 21.91 | 0.00 | 38.66 | 1.82 |
610 | 644 | 6.809428 | AGGGGTTAAGTTAACTAGGAGTAGT | 58.191 | 40.000 | 21.91 | 0.00 | 41.61 | 2.73 |
611 | 645 | 7.124721 | AGAGGGGTTAAGTTAACTAGGAGTAG | 58.875 | 42.308 | 21.91 | 0.00 | 38.68 | 2.57 |
612 | 646 | 7.049291 | AGAGGGGTTAAGTTAACTAGGAGTA | 57.951 | 40.000 | 21.91 | 0.00 | 38.68 | 2.59 |
613 | 647 | 5.913277 | AGAGGGGTTAAGTTAACTAGGAGT | 58.087 | 41.667 | 21.91 | 0.00 | 38.68 | 3.85 |
614 | 648 | 5.956563 | TGAGAGGGGTTAAGTTAACTAGGAG | 59.043 | 44.000 | 21.91 | 0.00 | 38.68 | 3.69 |
615 | 649 | 5.907421 | TGAGAGGGGTTAAGTTAACTAGGA | 58.093 | 41.667 | 21.91 | 0.00 | 38.68 | 2.94 |
616 | 650 | 6.616237 | TTGAGAGGGGTTAAGTTAACTAGG | 57.384 | 41.667 | 21.91 | 0.00 | 38.68 | 3.02 |
617 | 651 | 9.163899 | GAATTTGAGAGGGGTTAAGTTAACTAG | 57.836 | 37.037 | 21.91 | 0.00 | 38.68 | 2.57 |
618 | 652 | 7.820872 | CGAATTTGAGAGGGGTTAAGTTAACTA | 59.179 | 37.037 | 21.91 | 0.00 | 38.68 | 2.24 |
619 | 653 | 6.653740 | CGAATTTGAGAGGGGTTAAGTTAACT | 59.346 | 38.462 | 21.91 | 1.12 | 38.68 | 2.24 |
630 | 664 | 1.533625 | TTGTGCGAATTTGAGAGGGG | 58.466 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
668 | 702 | 0.604780 | GATGGTGGCATGAGGATCCG | 60.605 | 60.000 | 5.98 | 0.00 | 0.00 | 4.18 |
679 | 713 | 1.744014 | GGATGGCAATGATGGTGGC | 59.256 | 57.895 | 0.00 | 0.00 | 41.71 | 5.01 |
730 | 1134 | 3.912745 | AACCGCGGGCCTTTACCAG | 62.913 | 63.158 | 31.76 | 0.00 | 0.00 | 4.00 |
745 | 1158 | 0.813821 | GAAGAAGCCAGCCATGAACC | 59.186 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
877 | 1291 | 1.303091 | AATCCCTGCGCGGTTTGTAC | 61.303 | 55.000 | 16.49 | 0.00 | 0.00 | 2.90 |
893 | 1307 | 3.847671 | AGGGAAATCGAGGGAGAAATC | 57.152 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
939 | 1359 | 0.662970 | CGAGAGCTAGATTCAGCGGC | 60.663 | 60.000 | 0.00 | 0.00 | 46.52 | 6.53 |
979 | 1402 | 2.258897 | GCCTAGCTACGGCCGATC | 59.741 | 66.667 | 35.90 | 19.54 | 41.73 | 3.69 |
1054 | 1489 | 1.301293 | CCTTGGGCTTCCTCCTGTC | 59.699 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
1055 | 1490 | 2.911926 | GCCTTGGGCTTCCTCCTGT | 61.912 | 63.158 | 0.80 | 0.00 | 46.69 | 4.00 |
1056 | 1491 | 2.044551 | GCCTTGGGCTTCCTCCTG | 60.045 | 66.667 | 0.80 | 0.00 | 46.69 | 3.86 |
1530 | 1966 | 5.793026 | CTTAGTAAGCAAGAGAAGCAAGG | 57.207 | 43.478 | 0.00 | 0.00 | 0.00 | 3.61 |
1588 | 2024 | 7.683704 | GCAATAGGCAACAATTCTTCTCATGAT | 60.684 | 37.037 | 0.00 | 0.00 | 43.97 | 2.45 |
1590 | 2026 | 5.747197 | GCAATAGGCAACAATTCTTCTCATG | 59.253 | 40.000 | 0.00 | 0.00 | 43.97 | 3.07 |
1607 | 2043 | 9.561069 | AACTATTAACATAGGTTGAGCAATAGG | 57.439 | 33.333 | 17.95 | 6.81 | 37.31 | 2.57 |
1619 | 2055 | 9.257651 | GGTAGCAACTACAACTATTAACATAGG | 57.742 | 37.037 | 7.05 | 0.00 | 38.58 | 2.57 |
1715 | 2151 | 4.881019 | AAGTTCTGAAGCTCAGCTAAGA | 57.119 | 40.909 | 0.00 | 3.35 | 43.95 | 2.10 |
1743 | 2179 | 2.096417 | CGATCCGGAACAACTGAACAAC | 60.096 | 50.000 | 9.01 | 0.00 | 0.00 | 3.32 |
1810 | 2246 | 2.735134 | CACTACTTGCCAGTTCGGTTAC | 59.265 | 50.000 | 0.00 | 0.00 | 36.97 | 2.50 |
1826 | 2262 | 8.613482 | GGATACTCCTTAAAGCAATTTCACTAC | 58.387 | 37.037 | 0.00 | 0.00 | 32.53 | 2.73 |
1933 | 2370 | 7.469870 | GCAAGAGTACATGTCAGATACTCAGAT | 60.470 | 40.741 | 21.84 | 9.44 | 44.83 | 2.90 |
2100 | 2537 | 3.055094 | GGTGTCTGTTGATCATACCAGGT | 60.055 | 47.826 | 14.17 | 0.00 | 0.00 | 4.00 |
2110 | 2547 | 0.767375 | AGCACCAGGTGTCTGTTGAT | 59.233 | 50.000 | 21.26 | 0.00 | 35.73 | 2.57 |
2114 | 2551 | 1.750930 | CTGAGCACCAGGTGTCTGT | 59.249 | 57.895 | 21.26 | 3.59 | 39.31 | 3.41 |
2153 | 2590 | 8.007821 | TCGCTTATTTTAGCAAATCTAGATCG | 57.992 | 34.615 | 5.51 | 1.68 | 41.28 | 3.69 |
2516 | 3008 | 7.060383 | ACATACATTCAGTCTAATCCAGGAG | 57.940 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2542 | 3341 | 5.914898 | AAGGAGATTTGTAATTTTCCCGG | 57.085 | 39.130 | 0.00 | 0.00 | 0.00 | 5.73 |
2560 | 3360 | 6.884295 | CACCAGATAACAGGAATTTGTAAGGA | 59.116 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
2580 | 3380 | 1.605710 | CCTGTTCAGTTTCTGCACCAG | 59.394 | 52.381 | 0.00 | 0.00 | 27.06 | 4.00 |
2582 | 3382 | 0.954452 | CCCTGTTCAGTTTCTGCACC | 59.046 | 55.000 | 0.00 | 0.00 | 27.06 | 5.01 |
2756 | 3556 | 3.315749 | TGTTACGCAACGGAAAAGGAAAT | 59.684 | 39.130 | 0.00 | 0.00 | 37.48 | 2.17 |
2768 | 3568 | 4.782195 | GCACTATGTATGCTGTTACGCAAC | 60.782 | 45.833 | 6.06 | 0.00 | 44.06 | 4.17 |
2788 | 3588 | 2.027745 | TGAAATGAGAGTGAGGGAGCAC | 60.028 | 50.000 | 0.00 | 0.00 | 39.05 | 4.40 |
2794 | 3594 | 4.582869 | TCACCATTGAAATGAGAGTGAGG | 58.417 | 43.478 | 4.58 | 0.00 | 38.70 | 3.86 |
2841 | 3641 | 5.047660 | TGCAATTGGTTTAACAGGGACATAC | 60.048 | 40.000 | 7.72 | 0.00 | 0.00 | 2.39 |
2842 | 3642 | 5.080337 | TGCAATTGGTTTAACAGGGACATA | 58.920 | 37.500 | 7.72 | 0.00 | 0.00 | 2.29 |
2845 | 3645 | 4.535526 | ATGCAATTGGTTTAACAGGGAC | 57.464 | 40.909 | 7.72 | 0.00 | 0.00 | 4.46 |
2847 | 3647 | 9.097257 | CTTATAAATGCAATTGGTTTAACAGGG | 57.903 | 33.333 | 7.72 | 0.00 | 36.10 | 4.45 |
2871 | 3718 | 6.093909 | CACAAAAGAAACAGGAAAATTGCCTT | 59.906 | 34.615 | 0.00 | 0.00 | 32.12 | 4.35 |
2874 | 3721 | 6.091986 | TGTCACAAAAGAAACAGGAAAATTGC | 59.908 | 34.615 | 0.00 | 0.00 | 0.00 | 3.56 |
2920 | 3767 | 3.890756 | TGGAATCATGTAACCATGGATGC | 59.109 | 43.478 | 21.47 | 11.51 | 46.96 | 3.91 |
3054 | 3901 | 3.756963 | GGATGTAGTTGGAACTTGGAACC | 59.243 | 47.826 | 0.00 | 0.00 | 40.37 | 3.62 |
3294 | 4147 | 7.543868 | TCATGCATTTTATTTCCAAGTTTACGG | 59.456 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
3303 | 4156 | 8.920174 | AGATCTGAATCATGCATTTTATTTCCA | 58.080 | 29.630 | 0.00 | 0.00 | 34.07 | 3.53 |
3333 | 4186 | 3.693807 | ACTCACAGCATCCATCAACATT | 58.306 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
3459 | 4316 | 6.494666 | ACGAATTCTCCATAATCAAGGGTA | 57.505 | 37.500 | 3.52 | 0.00 | 0.00 | 3.69 |
3537 | 4394 | 6.931281 | TCTTGTCTTGGTCAAAGTATGAGAAG | 59.069 | 38.462 | 0.00 | 0.00 | 39.19 | 2.85 |
3549 | 4406 | 1.507140 | ACCCACTCTTGTCTTGGTCA | 58.493 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3558 | 4415 | 6.471233 | TCAATCTCTATGTACCCACTCTTG | 57.529 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
3588 | 4445 | 3.558746 | CCTCATCAGTCAAAGCCACTCTT | 60.559 | 47.826 | 0.00 | 0.00 | 36.34 | 2.85 |
3747 | 4604 | 8.657729 | GGTTTCAGTTTTCAGTAGTAGATAAGC | 58.342 | 37.037 | 0.00 | 0.00 | 0.00 | 3.09 |
3841 | 4698 | 4.021719 | AGCAACATTTGAATCCTGAACCAG | 60.022 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
3897 | 4764 | 3.307782 | GCAATGATAGCAATTGCCAACAC | 59.692 | 43.478 | 26.45 | 13.83 | 43.34 | 3.32 |
3975 | 4842 | 3.488553 | GCCGCTTATTTTATGGTGTCCAC | 60.489 | 47.826 | 0.00 | 0.00 | 35.80 | 4.02 |
3981 | 4848 | 4.465886 | TGGTATGCCGCTTATTTTATGGT | 58.534 | 39.130 | 0.00 | 0.00 | 37.67 | 3.55 |
3996 | 4863 | 2.489938 | TCCTTGTCTGGTTGGTATGC | 57.510 | 50.000 | 0.00 | 0.00 | 0.00 | 3.14 |
4091 | 5119 | 2.376695 | ATGCATTTGATCCTCAGGGG | 57.623 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4106 | 5134 | 4.558226 | ATTCTTGACTGTCTGGTATGCA | 57.442 | 40.909 | 9.51 | 0.00 | 0.00 | 3.96 |
4164 | 5194 | 1.127567 | TCCTTGTGACCTGGTCTGGG | 61.128 | 60.000 | 26.03 | 20.19 | 33.15 | 4.45 |
4209 | 5248 | 5.177881 | TGCAGCTTTCAATTGCAAATTGTAG | 59.822 | 36.000 | 1.71 | 11.10 | 44.13 | 2.74 |
4254 | 5293 | 3.830178 | TCGATGTCAGGGTTGAACTTAGA | 59.170 | 43.478 | 0.00 | 0.00 | 34.49 | 2.10 |
4471 | 5510 | 0.320247 | AGCACCTCGTCTGCTTCTTG | 60.320 | 55.000 | 0.00 | 0.00 | 42.54 | 3.02 |
4477 | 5516 | 0.601311 | AAACAGAGCACCTCGTCTGC | 60.601 | 55.000 | 0.00 | 0.00 | 43.48 | 4.26 |
4613 | 5652 | 6.546395 | CGAAGGAAAATGAAAATCTGACGAT | 58.454 | 36.000 | 0.00 | 0.00 | 0.00 | 3.73 |
4690 | 5752 | 5.597813 | ACGATCTTCTTTACAAGCAACAG | 57.402 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
4784 | 5846 | 1.085091 | GCTGATGAGTGCAAGACCAG | 58.915 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4816 | 5878 | 1.770957 | CAAAGGTGAAAAGCCGAAGC | 58.229 | 50.000 | 0.00 | 0.00 | 40.32 | 3.86 |
4817 | 5879 | 1.338020 | AGCAAAGGTGAAAAGCCGAAG | 59.662 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
4818 | 5880 | 1.066908 | CAGCAAAGGTGAAAAGCCGAA | 59.933 | 47.619 | 0.00 | 0.00 | 32.22 | 4.30 |
4819 | 5881 | 0.667993 | CAGCAAAGGTGAAAAGCCGA | 59.332 | 50.000 | 0.00 | 0.00 | 32.22 | 5.54 |
4820 | 5882 | 0.940991 | GCAGCAAAGGTGAAAAGCCG | 60.941 | 55.000 | 0.00 | 0.00 | 32.22 | 5.52 |
4882 | 5980 | 0.249741 | CGACAAACCGGAACCTCTGT | 60.250 | 55.000 | 9.46 | 1.12 | 0.00 | 3.41 |
4905 | 6003 | 0.743688 | TGCATCTGTTTGCCGTGTTT | 59.256 | 45.000 | 0.00 | 0.00 | 42.06 | 2.83 |
4917 | 6015 | 1.303799 | ACGGCAGAAGCTTGCATCTG | 61.304 | 55.000 | 19.53 | 19.53 | 45.86 | 2.90 |
4936 | 6034 | 4.000325 | CACGACCAAATAACCTGTCATCA | 59.000 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
4937 | 6035 | 3.181510 | GCACGACCAAATAACCTGTCATC | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 2.92 |
4938 | 6036 | 2.747446 | GCACGACCAAATAACCTGTCAT | 59.253 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
5086 | 6201 | 5.511729 | GGATTATTTTGCAAACTGAGCGTAC | 59.488 | 40.000 | 12.39 | 0.00 | 33.85 | 3.67 |
5089 | 6204 | 4.737054 | AGGATTATTTTGCAAACTGAGCG | 58.263 | 39.130 | 12.39 | 0.00 | 33.85 | 5.03 |
5093 | 6208 | 6.071165 | AGGAGGAAGGATTATTTTGCAAACTG | 60.071 | 38.462 | 12.39 | 0.00 | 0.00 | 3.16 |
5108 | 6365 | 5.219739 | ACATATTAGCAAGAGGAGGAAGGA | 58.780 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
5129 | 6386 | 6.266323 | GCATACGAGAAGATTCTTCAGTACA | 58.734 | 40.000 | 24.51 | 12.32 | 37.73 | 2.90 |
5130 | 6387 | 5.688176 | GGCATACGAGAAGATTCTTCAGTAC | 59.312 | 44.000 | 24.51 | 16.25 | 37.73 | 2.73 |
5131 | 6388 | 5.221263 | GGGCATACGAGAAGATTCTTCAGTA | 60.221 | 44.000 | 24.51 | 24.29 | 37.73 | 2.74 |
5132 | 6389 | 4.442192 | GGGCATACGAGAAGATTCTTCAGT | 60.442 | 45.833 | 24.51 | 23.26 | 37.73 | 3.41 |
5136 | 6393 | 3.452627 | ACTGGGCATACGAGAAGATTCTT | 59.547 | 43.478 | 0.00 | 0.00 | 37.73 | 2.52 |
5142 | 6399 | 2.032620 | AGGTACTGGGCATACGAGAAG | 58.967 | 52.381 | 0.00 | 0.00 | 37.18 | 2.85 |
5147 | 6404 | 2.396590 | ACAAAGGTACTGGGCATACG | 57.603 | 50.000 | 0.00 | 0.00 | 40.86 | 3.06 |
5157 | 6414 | 8.263940 | TGAAATCACTGCTTATACAAAGGTAC | 57.736 | 34.615 | 0.00 | 0.00 | 30.94 | 3.34 |
5160 | 6417 | 9.294030 | GATTTGAAATCACTGCTTATACAAAGG | 57.706 | 33.333 | 12.73 | 0.00 | 0.00 | 3.11 |
5256 | 6513 | 3.312890 | CAGGTCTGAAGGGATCCAGTAT | 58.687 | 50.000 | 15.23 | 0.00 | 0.00 | 2.12 |
5328 | 6595 | 7.939039 | CGGATCATAGGCCCAACAATTATATAT | 59.061 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
5340 | 6609 | 1.045407 | GTGTACGGATCATAGGCCCA | 58.955 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
5371 | 6640 | 0.446222 | CGTGGCCTATTTGTCAACCG | 59.554 | 55.000 | 3.32 | 0.00 | 0.00 | 4.44 |
5402 | 6682 | 1.953017 | CCCTGACCGAGATAGCGAG | 59.047 | 63.158 | 0.00 | 0.00 | 0.00 | 5.03 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.