Multiple sequence alignment - TraesCS5B01G474400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G474400 chr5B 100.000 2447 0 0 1 2447 647899398 647901844 0.000000e+00 4519.0
1 TraesCS5B01G474400 chr5B 92.946 241 14 2 2207 2447 652876518 652876755 5.010000e-92 348.0
2 TraesCS5B01G474400 chr5A 90.738 637 44 7 975 1598 643324853 643325487 0.000000e+00 835.0
3 TraesCS5B01G474400 chr5A 86.213 602 46 20 1 569 643322139 643322736 3.460000e-173 617.0
4 TraesCS5B01G474400 chr5D 95.585 521 18 4 975 1494 515109362 515109878 0.000000e+00 830.0
5 TraesCS5B01G474400 chr5D 91.887 567 32 7 1 558 515107425 515107986 0.000000e+00 780.0
6 TraesCS5B01G474400 chr5D 82.210 534 65 21 1699 2207 515110385 515110913 1.340000e-117 433.0
7 TraesCS5B01G474400 chr5D 93.333 210 13 1 2239 2447 427566759 427566968 2.360000e-80 309.0
8 TraesCS5B01G474400 chr5D 87.850 107 13 0 345 451 515108650 515108756 2.550000e-25 126.0
9 TraesCS5B01G474400 chr1B 97.510 241 6 0 2207 2447 659084397 659084157 1.750000e-111 412.0
10 TraesCS5B01G474400 chr1B 95.851 241 10 0 2207 2447 659192209 659191969 8.200000e-105 390.0
11 TraesCS5B01G474400 chr1B 93.776 241 15 0 2207 2447 473292001 473292241 1.790000e-96 363.0
12 TraesCS5B01G474400 chr1B 89.894 188 19 0 2207 2394 603513149 603513336 2.430000e-60 243.0
13 TraesCS5B01G474400 chr3B 94.606 241 13 0 2207 2447 341969413 341969173 8.260000e-100 374.0
14 TraesCS5B01G474400 chr6B 93.004 243 15 1 2207 2447 487776468 487776226 1.080000e-93 353.0
15 TraesCS5B01G474400 chr1A 90.756 238 18 4 2212 2447 478428069 478427834 5.080000e-82 315.0
16 TraesCS5B01G474400 chr7B 84.643 280 25 5 975 1254 29047219 29047480 1.870000e-66 263.0
17 TraesCS5B01G474400 chr7D 85.892 241 15 6 2207 2447 598484678 598484457 3.140000e-59 239.0
18 TraesCS5B01G474400 chr1D 87.500 152 9 1 1296 1447 381030273 381030132 1.510000e-37 167.0
19 TraesCS5B01G474400 chr4A 100.000 29 0 0 63 91 617526127 617526099 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G474400 chr5B 647899398 647901844 2446 False 4519.00 4519 100.0000 1 2447 1 chr5B.!!$F1 2446
1 TraesCS5B01G474400 chr5A 643322139 643325487 3348 False 726.00 835 88.4755 1 1598 2 chr5A.!!$F1 1597
2 TraesCS5B01G474400 chr5D 515107425 515110913 3488 False 542.25 830 89.3830 1 2207 4 chr5D.!!$F2 2206

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
601 695 0.035152 CCACAGCACCTTAGGCATGA 60.035 55.0 0.0 0.0 0.0 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2209 4680 0.030369 GCTGCTACCATTGCTCATGC 59.97 55.0 0.0 0.0 40.2 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
155 156 2.338015 CGAGGGGACGGACGAGAAA 61.338 63.158 0.00 0.00 0.00 2.52
159 160 1.153804 GGGACGGACGAGAAAGAGC 60.154 63.158 0.00 0.00 0.00 4.09
168 169 3.612247 GAGAAAGAGCGCCTGCCCA 62.612 63.158 2.29 0.00 44.31 5.36
218 219 1.410153 ACGTTTCAAGTCAGGTACGGT 59.590 47.619 0.00 0.00 33.66 4.83
355 384 6.097356 TGGTTGATCAGTCGTTGATTAGTAC 58.903 40.000 0.00 0.00 46.51 2.73
356 385 6.071560 TGGTTGATCAGTCGTTGATTAGTACT 60.072 38.462 0.00 0.00 46.51 2.73
357 386 7.121611 TGGTTGATCAGTCGTTGATTAGTACTA 59.878 37.037 0.00 0.00 46.51 1.82
452 481 5.169295 GTTCTAGCTGTCGGTAGTTTTCAT 58.831 41.667 0.00 0.00 41.02 2.57
473 502 9.712305 TTTCATTTTTCAACTGTTAAAGGTTGA 57.288 25.926 15.89 15.89 46.42 3.18
485 523 7.439056 ACTGTTAAAGGTTGAATTTTGATGCTG 59.561 33.333 0.00 0.00 0.00 4.41
541 579 4.038080 CCCAACGCGGCAAACCTC 62.038 66.667 12.47 0.00 0.00 3.85
551 589 1.001378 CGGCAAACCTCAAGAACAAGG 60.001 52.381 0.00 0.00 38.70 3.61
569 663 5.491982 ACAAGGCATGTTTGGTTTTGTAAA 58.508 33.333 14.02 0.00 40.06 2.01
570 664 6.118852 ACAAGGCATGTTTGGTTTTGTAAAT 58.881 32.000 14.02 0.00 40.06 1.40
571 665 7.275920 ACAAGGCATGTTTGGTTTTGTAAATA 58.724 30.769 14.02 0.00 40.06 1.40
572 666 7.770897 ACAAGGCATGTTTGGTTTTGTAAATAA 59.229 29.630 14.02 0.00 40.06 1.40
581 675 7.988904 TTGGTTTTGTAAATAAAGGTTCACG 57.011 32.000 0.00 0.00 0.00 4.35
596 690 2.034879 CACGCCACAGCACCTTAGG 61.035 63.158 0.00 0.00 39.83 2.69
599 693 1.379044 GCCACAGCACCTTAGGCAT 60.379 57.895 0.00 0.00 44.59 4.40
601 695 0.035152 CCACAGCACCTTAGGCATGA 60.035 55.000 0.00 0.00 0.00 3.07
602 696 1.614051 CCACAGCACCTTAGGCATGAA 60.614 52.381 0.00 0.00 0.00 2.57
603 697 2.372264 CACAGCACCTTAGGCATGAAT 58.628 47.619 0.00 0.00 0.00 2.57
604 698 2.756760 CACAGCACCTTAGGCATGAATT 59.243 45.455 0.00 0.00 0.00 2.17
605 699 3.947196 CACAGCACCTTAGGCATGAATTA 59.053 43.478 0.00 0.00 0.00 1.40
608 702 2.290641 GCACCTTAGGCATGAATTACGG 59.709 50.000 0.00 0.00 0.00 4.02
609 703 3.541632 CACCTTAGGCATGAATTACGGT 58.458 45.455 0.00 0.00 0.00 4.83
610 704 4.699637 CACCTTAGGCATGAATTACGGTA 58.300 43.478 0.00 0.00 0.00 4.02
611 705 4.750098 CACCTTAGGCATGAATTACGGTAG 59.250 45.833 0.00 0.00 0.00 3.18
612 706 4.407945 ACCTTAGGCATGAATTACGGTAGT 59.592 41.667 0.00 0.00 0.00 2.73
613 707 5.104652 ACCTTAGGCATGAATTACGGTAGTT 60.105 40.000 0.00 0.00 0.00 2.24
614 708 5.236478 CCTTAGGCATGAATTACGGTAGTTG 59.764 44.000 0.00 0.00 0.00 3.16
624 829 1.813753 CGGTAGTTGACATGGCGGG 60.814 63.158 0.00 0.00 0.00 6.13
625 830 2.112815 GGTAGTTGACATGGCGGGC 61.113 63.158 0.00 0.00 0.00 6.13
626 831 2.125310 TAGTTGACATGGCGGGCG 60.125 61.111 0.00 0.00 0.00 6.13
627 832 2.651105 TAGTTGACATGGCGGGCGA 61.651 57.895 0.00 0.00 0.00 5.54
628 833 2.572095 TAGTTGACATGGCGGGCGAG 62.572 60.000 0.00 0.00 0.00 5.03
682 934 5.591067 TCAAACTGACCAGAAAACGGTTATT 59.409 36.000 3.76 0.00 36.69 1.40
684 936 5.684550 ACTGACCAGAAAACGGTTATTTC 57.315 39.130 3.76 0.00 36.69 2.17
697 949 5.137551 ACGGTTATTTCTTATGGGAATGGG 58.862 41.667 0.00 0.00 0.00 4.00
700 952 6.773685 CGGTTATTTCTTATGGGAATGGGTAA 59.226 38.462 0.00 0.00 0.00 2.85
701 953 7.285858 CGGTTATTTCTTATGGGAATGGGTAAA 59.714 37.037 0.00 0.00 0.00 2.01
705 957 5.382664 TCTTATGGGAATGGGTAAAGGTC 57.617 43.478 0.00 0.00 0.00 3.85
712 964 3.118371 GGAATGGGTAAAGGTCAGTCGAT 60.118 47.826 0.00 0.00 0.00 3.59
713 965 4.514401 GAATGGGTAAAGGTCAGTCGATT 58.486 43.478 0.00 0.00 0.00 3.34
714 966 3.328382 TGGGTAAAGGTCAGTCGATTG 57.672 47.619 0.68 0.68 0.00 2.67
715 967 2.027561 TGGGTAAAGGTCAGTCGATTGG 60.028 50.000 8.17 0.00 0.00 3.16
747 999 6.425577 TTTAGGTTAATCGATTGTTTCCCG 57.574 37.500 20.87 0.00 0.00 5.14
751 1003 1.373590 AATCGATTGTTTCCCGGCCG 61.374 55.000 21.04 21.04 0.00 6.13
767 1019 1.213537 CCGTTGGATGGCAAAGCAG 59.786 57.895 0.00 0.00 0.00 4.24
770 1022 0.389426 GTTGGATGGCAAAGCAGCAG 60.389 55.000 0.00 0.00 35.83 4.24
771 1023 0.828762 TTGGATGGCAAAGCAGCAGT 60.829 50.000 0.00 0.00 35.83 4.40
772 1024 1.246056 TGGATGGCAAAGCAGCAGTC 61.246 55.000 0.00 0.00 35.83 3.51
773 1025 1.136147 GATGGCAAAGCAGCAGTCG 59.864 57.895 0.00 0.00 35.83 4.18
774 1026 1.580845 GATGGCAAAGCAGCAGTCGT 61.581 55.000 0.00 0.00 35.83 4.34
775 1027 0.321564 ATGGCAAAGCAGCAGTCGTA 60.322 50.000 0.00 0.00 35.83 3.43
776 1028 0.321564 TGGCAAAGCAGCAGTCGTAT 60.322 50.000 0.00 0.00 35.83 3.06
777 1029 0.804989 GGCAAAGCAGCAGTCGTATT 59.195 50.000 0.00 0.00 35.83 1.89
778 1030 1.200020 GGCAAAGCAGCAGTCGTATTT 59.800 47.619 0.00 0.00 35.83 1.40
779 1031 2.351738 GGCAAAGCAGCAGTCGTATTTT 60.352 45.455 0.00 0.00 35.83 1.82
780 1032 3.308530 GCAAAGCAGCAGTCGTATTTTT 58.691 40.909 0.00 0.00 0.00 1.94
807 1059 4.927425 TCGACCCTCTAAAGAAATTGTTCG 59.073 41.667 0.00 0.00 38.90 3.95
810 1062 6.313744 ACCCTCTAAAGAAATTGTTCGTTG 57.686 37.500 0.00 0.00 36.34 4.10
822 1074 1.000607 TGTTCGTTGTCTTCCTCCTCG 60.001 52.381 0.00 0.00 0.00 4.63
824 1076 1.801913 CGTTGTCTTCCTCCTCGCG 60.802 63.158 0.00 0.00 0.00 5.87
829 1081 1.135083 TGTCTTCCTCCTCGCGATTTC 60.135 52.381 10.36 0.00 0.00 2.17
833 1085 0.744874 TCCTCCTCGCGATTTCGATT 59.255 50.000 10.36 0.00 43.02 3.34
835 1087 1.258982 CCTCCTCGCGATTTCGATTTG 59.741 52.381 10.36 0.00 43.02 2.32
841 1093 1.531058 CGCGATTTCGATTTGAACCCC 60.531 52.381 0.00 0.00 43.02 4.95
856 1108 1.925455 CCCCTTCTTCCTCTGGCCA 60.925 63.158 4.71 4.71 0.00 5.36
862 1114 2.610859 TTCCTCTGGCCACCCTCC 60.611 66.667 0.00 0.00 0.00 4.30
876 1128 4.785453 CTCCAGCCCAGGCCGAAC 62.785 72.222 4.70 0.00 43.17 3.95
890 1174 0.035458 CCGAACTGCCAGTCTCCTTT 59.965 55.000 0.00 0.00 0.00 3.11
895 1179 2.134630 CTGCCAGTCTCCTTTGCCCT 62.135 60.000 0.00 0.00 0.00 5.19
899 1183 0.111253 CAGTCTCCTTTGCCCTTGGT 59.889 55.000 0.00 0.00 0.00 3.67
903 1187 0.955919 CTCCTTTGCCCTTGGTCGAC 60.956 60.000 7.13 7.13 0.00 4.20
906 1190 1.566018 CTTTGCCCTTGGTCGACGAC 61.566 60.000 19.70 19.70 0.00 4.34
910 1194 2.049433 CCTTGGTCGACGACGCTT 60.049 61.111 20.92 0.00 39.58 4.68
912 1196 3.000080 CTTGGTCGACGACGCTTGC 62.000 63.158 20.92 7.96 39.58 4.01
925 1209 2.126850 CTTGCGCGACTGTCTCGA 60.127 61.111 22.72 6.34 46.14 4.04
926 1210 2.428569 TTGCGCGACTGTCTCGAC 60.429 61.111 22.72 14.16 46.14 4.20
927 1211 3.189010 TTGCGCGACTGTCTCGACA 62.189 57.895 22.72 16.30 46.14 4.35
933 1888 3.628280 GACTGTCTCGACACCCCGC 62.628 68.421 0.00 0.00 36.21 6.13
938 1893 4.016706 CTCGACACCCCGCCCTTT 62.017 66.667 0.00 0.00 0.00 3.11
945 1900 4.426313 CCCCGCCCTTTCCTCACC 62.426 72.222 0.00 0.00 0.00 4.02
946 1901 3.646715 CCCGCCCTTTCCTCACCA 61.647 66.667 0.00 0.00 0.00 4.17
961 1916 4.776322 CCATCGGGCTTGCCGTCA 62.776 66.667 5.49 0.00 0.00 4.35
1490 3668 4.578928 TGGAAGCAAAACCTTCAGTCTTAC 59.421 41.667 4.54 0.00 42.31 2.34
1515 3693 7.609532 ACCTTCAGATACAGAAAAATTCAGAGG 59.390 37.037 0.00 0.00 0.00 3.69
1626 3806 3.263489 ACAGAGATTGGTCAGATGCTG 57.737 47.619 0.00 0.00 0.00 4.41
1634 3814 3.737559 TGGTCAGATGCTGGGTTAATT 57.262 42.857 0.00 0.00 31.51 1.40
1647 3827 6.325286 TGCTGGGTTAATTAGGAAAAACAGTT 59.675 34.615 0.00 0.00 0.00 3.16
1648 3828 6.866770 GCTGGGTTAATTAGGAAAAACAGTTC 59.133 38.462 0.00 0.00 0.00 3.01
1649 3829 7.470841 GCTGGGTTAATTAGGAAAAACAGTTCA 60.471 37.037 0.00 0.00 0.00 3.18
1661 3841 5.567138 AAAACAGTTCATATAGCCACTGC 57.433 39.130 7.55 0.00 40.35 4.40
1662 3842 3.912496 ACAGTTCATATAGCCACTGCA 57.088 42.857 7.55 0.00 40.35 4.41
1717 4114 1.279271 ACGGCAATAGGTTTCTGCTCT 59.721 47.619 0.00 0.00 36.32 4.09
1721 4118 2.354199 GCAATAGGTTTCTGCTCTGCTC 59.646 50.000 0.00 0.00 33.20 4.26
1735 4132 2.280052 GCTCGAGCCTCTGGATGC 60.280 66.667 27.22 0.00 34.31 3.91
1752 4149 1.676967 GCAGCTTGTTGAGGAGGGG 60.677 63.158 0.00 0.00 0.00 4.79
1753 4150 2.069776 CAGCTTGTTGAGGAGGGGA 58.930 57.895 0.00 0.00 0.00 4.81
1767 4164 3.249189 GGGACCTGGTGAGCCACA 61.249 66.667 2.82 0.00 40.46 4.17
1776 4173 3.768633 GTGAGCCACACCATAGAGG 57.231 57.895 0.85 0.00 43.05 3.69
1779 4176 0.466124 GAGCCACACCATAGAGGACC 59.534 60.000 0.00 0.00 41.22 4.46
1793 4257 8.445548 CCATAGAGGACCCAAACTCTGGAAAA 62.446 46.154 4.57 0.00 44.45 2.29
1815 4279 1.453762 GCAGGAGCCATGGAGAATGC 61.454 60.000 18.40 15.75 34.67 3.56
1817 4281 1.228228 GGAGCCATGGAGAATGCCA 59.772 57.895 18.40 0.00 43.23 4.92
1820 4284 1.340248 GAGCCATGGAGAATGCCATTG 59.660 52.381 18.40 0.00 46.29 2.82
1828 4292 3.245016 TGGAGAATGCCATTGTTGAGAGT 60.245 43.478 0.00 0.00 31.66 3.24
1829 4293 4.019411 TGGAGAATGCCATTGTTGAGAGTA 60.019 41.667 0.00 0.00 31.66 2.59
1830 4294 4.943705 GGAGAATGCCATTGTTGAGAGTAA 59.056 41.667 0.00 0.00 0.00 2.24
1831 4295 5.591877 GGAGAATGCCATTGTTGAGAGTAAT 59.408 40.000 0.00 0.00 0.00 1.89
1832 4296 6.096001 GGAGAATGCCATTGTTGAGAGTAATT 59.904 38.462 0.00 0.00 0.00 1.40
1833 4297 7.283127 GGAGAATGCCATTGTTGAGAGTAATTA 59.717 37.037 0.00 0.00 0.00 1.40
1834 4298 8.218338 AGAATGCCATTGTTGAGAGTAATTAG 57.782 34.615 0.00 0.00 0.00 1.73
1835 4299 5.818136 TGCCATTGTTGAGAGTAATTAGC 57.182 39.130 0.00 0.00 0.00 3.09
1836 4300 4.640201 TGCCATTGTTGAGAGTAATTAGCC 59.360 41.667 0.00 0.00 0.00 3.93
1837 4301 4.884164 GCCATTGTTGAGAGTAATTAGCCT 59.116 41.667 0.00 0.00 0.00 4.58
1838 4302 6.055588 GCCATTGTTGAGAGTAATTAGCCTA 58.944 40.000 0.00 0.00 0.00 3.93
1839 4303 6.203723 GCCATTGTTGAGAGTAATTAGCCTAG 59.796 42.308 0.00 0.00 0.00 3.02
1840 4304 6.708054 CCATTGTTGAGAGTAATTAGCCTAGG 59.292 42.308 3.67 3.67 0.00 3.02
1841 4305 7.419057 CCATTGTTGAGAGTAATTAGCCTAGGA 60.419 40.741 14.75 0.00 0.00 2.94
1842 4306 7.676683 TTGTTGAGAGTAATTAGCCTAGGAT 57.323 36.000 14.75 9.51 0.00 3.24
1843 4307 7.291411 TGTTGAGAGTAATTAGCCTAGGATC 57.709 40.000 14.75 0.00 0.00 3.36
1844 4308 7.069986 TGTTGAGAGTAATTAGCCTAGGATCT 58.930 38.462 14.75 3.19 0.00 2.75
1845 4309 7.565398 TGTTGAGAGTAATTAGCCTAGGATCTT 59.435 37.037 14.75 6.48 0.00 2.40
1846 4310 9.080097 GTTGAGAGTAATTAGCCTAGGATCTTA 57.920 37.037 14.75 5.40 0.00 2.10
1847 4311 8.871629 TGAGAGTAATTAGCCTAGGATCTTAG 57.128 38.462 14.75 4.89 0.00 2.18
1848 4312 7.891183 TGAGAGTAATTAGCCTAGGATCTTAGG 59.109 40.741 23.37 23.37 42.62 2.69
1849 4313 7.771673 AGAGTAATTAGCCTAGGATCTTAGGT 58.228 38.462 26.73 17.66 41.90 3.08
1850 4314 7.672239 AGAGTAATTAGCCTAGGATCTTAGGTG 59.328 40.741 26.73 7.99 41.90 4.00
1851 4315 7.306781 AGTAATTAGCCTAGGATCTTAGGTGT 58.693 38.462 26.73 18.56 41.90 4.16
1852 4316 6.426646 AATTAGCCTAGGATCTTAGGTGTG 57.573 41.667 26.73 7.04 41.90 3.82
1853 4317 2.683768 AGCCTAGGATCTTAGGTGTGG 58.316 52.381 26.73 7.58 41.90 4.17
1854 4318 2.022918 AGCCTAGGATCTTAGGTGTGGT 60.023 50.000 26.73 8.36 41.90 4.16
1855 4319 2.103263 GCCTAGGATCTTAGGTGTGGTG 59.897 54.545 26.73 5.46 41.90 4.17
1856 4320 3.375699 CCTAGGATCTTAGGTGTGGTGT 58.624 50.000 20.27 0.00 36.29 4.16
1857 4321 3.385111 CCTAGGATCTTAGGTGTGGTGTC 59.615 52.174 20.27 0.00 36.29 3.67
1858 4322 3.191888 AGGATCTTAGGTGTGGTGTCT 57.808 47.619 0.00 0.00 0.00 3.41
1859 4323 4.332683 AGGATCTTAGGTGTGGTGTCTA 57.667 45.455 0.00 0.00 0.00 2.59
1860 4324 4.684724 AGGATCTTAGGTGTGGTGTCTAA 58.315 43.478 0.00 0.00 0.00 2.10
1861 4325 5.281314 AGGATCTTAGGTGTGGTGTCTAAT 58.719 41.667 0.00 0.00 0.00 1.73
1862 4326 5.726793 AGGATCTTAGGTGTGGTGTCTAATT 59.273 40.000 0.00 0.00 0.00 1.40
1863 4327 6.049790 GGATCTTAGGTGTGGTGTCTAATTC 58.950 44.000 0.00 0.00 0.00 2.17
1864 4328 6.127026 GGATCTTAGGTGTGGTGTCTAATTCT 60.127 42.308 0.00 0.00 0.00 2.40
1865 4329 6.037786 TCTTAGGTGTGGTGTCTAATTCTG 57.962 41.667 0.00 0.00 0.00 3.02
1866 4330 5.542635 TCTTAGGTGTGGTGTCTAATTCTGT 59.457 40.000 0.00 0.00 0.00 3.41
1867 4331 4.273148 AGGTGTGGTGTCTAATTCTGTC 57.727 45.455 0.00 0.00 0.00 3.51
1868 4332 3.904339 AGGTGTGGTGTCTAATTCTGTCT 59.096 43.478 0.00 0.00 0.00 3.41
1869 4333 4.348168 AGGTGTGGTGTCTAATTCTGTCTT 59.652 41.667 0.00 0.00 0.00 3.01
1870 4334 5.542635 AGGTGTGGTGTCTAATTCTGTCTTA 59.457 40.000 0.00 0.00 0.00 2.10
1871 4335 6.213600 AGGTGTGGTGTCTAATTCTGTCTTAT 59.786 38.462 0.00 0.00 0.00 1.73
1872 4336 6.535508 GGTGTGGTGTCTAATTCTGTCTTATC 59.464 42.308 0.00 0.00 0.00 1.75
1873 4337 6.253727 GTGTGGTGTCTAATTCTGTCTTATCG 59.746 42.308 0.00 0.00 0.00 2.92
1874 4338 5.232414 GTGGTGTCTAATTCTGTCTTATCGC 59.768 44.000 0.00 0.00 0.00 4.58
1875 4339 4.745620 GGTGTCTAATTCTGTCTTATCGCC 59.254 45.833 0.00 0.00 0.00 5.54
1876 4340 4.745620 GTGTCTAATTCTGTCTTATCGCCC 59.254 45.833 0.00 0.00 0.00 6.13
1877 4341 4.404394 TGTCTAATTCTGTCTTATCGCCCA 59.596 41.667 0.00 0.00 0.00 5.36
1878 4342 5.105106 TGTCTAATTCTGTCTTATCGCCCAA 60.105 40.000 0.00 0.00 0.00 4.12
1890 4354 3.788333 ATCGCCCAACAATCTGATTTG 57.212 42.857 0.00 0.00 0.00 2.32
1896 4360 4.338879 CCCAACAATCTGATTTGAGTCCT 58.661 43.478 0.00 0.00 0.00 3.85
1920 4384 7.362142 CCTTGTATAAACCTTTTGCTCTCCTTC 60.362 40.741 0.00 0.00 0.00 3.46
1927 4391 5.983540 ACCTTTTGCTCTCCTTCTATACAG 58.016 41.667 0.00 0.00 0.00 2.74
1935 4399 8.164057 TGCTCTCCTTCTATACAGATAGGATA 57.836 38.462 3.40 0.00 37.41 2.59
1945 4409 4.775058 ACAGATAGGATACGTCATGAGC 57.225 45.455 0.00 0.00 46.39 4.26
1946 4410 3.508012 ACAGATAGGATACGTCATGAGCC 59.492 47.826 0.00 0.00 46.39 4.70
1955 4419 5.416326 GGATACGTCATGAGCCTACTAAGAT 59.584 44.000 0.00 0.00 0.00 2.40
1956 4420 6.598457 GGATACGTCATGAGCCTACTAAGATA 59.402 42.308 0.00 0.00 0.00 1.98
1958 4422 6.902771 ACGTCATGAGCCTACTAAGATAAT 57.097 37.500 0.00 0.00 0.00 1.28
1959 4423 7.997773 ACGTCATGAGCCTACTAAGATAATA 57.002 36.000 0.00 0.00 0.00 0.98
1960 4424 8.405418 ACGTCATGAGCCTACTAAGATAATAA 57.595 34.615 0.00 0.00 0.00 1.40
2014 4484 3.628942 ACCACCGTTTTAGAGTTTTGGAC 59.371 43.478 0.00 0.00 0.00 4.02
2018 4488 4.337274 ACCGTTTTAGAGTTTTGGACCAAG 59.663 41.667 7.07 0.00 0.00 3.61
2022 4492 7.030768 CGTTTTAGAGTTTTGGACCAAGAAAA 58.969 34.615 7.07 6.18 0.00 2.29
2023 4493 7.542824 CGTTTTAGAGTTTTGGACCAAGAAAAA 59.457 33.333 7.07 4.29 0.00 1.94
2071 4542 2.994699 CCCCCTATGGTGCAACGA 59.005 61.111 0.00 0.00 38.12 3.85
2077 4548 3.318006 TATGGTGCAACGACCCCCG 62.318 63.158 0.00 0.00 45.44 5.73
2112 4583 2.765807 ATCTGGAGGCACCCGAGG 60.766 66.667 0.00 0.00 35.47 4.63
2133 4604 1.538950 CTGAAGGCTTGGTTGAAGAGC 59.461 52.381 3.46 0.00 32.82 4.09
2152 4623 8.699130 TGAAGAGCAATTACTCTGAGATAATGA 58.301 33.333 12.44 0.00 46.38 2.57
2167 4638 4.586841 AGATAATGAGAAGGAAGAGGACGG 59.413 45.833 0.00 0.00 0.00 4.79
2171 4642 0.615261 AGAAGGAAGAGGACGGGACC 60.615 60.000 0.00 0.00 0.00 4.46
2179 4650 1.381327 AGGACGGGACCGATGATGT 60.381 57.895 18.80 0.00 42.83 3.06
2184 4655 0.108377 CGGGACCGATGATGTTGTCA 60.108 55.000 4.40 0.00 42.83 3.58
2197 4668 2.058705 TGTTGTCATGTACCCTCCCAA 58.941 47.619 0.00 0.00 0.00 4.12
2207 4678 1.277580 ACCCTCCCAAGCTCCATGAG 61.278 60.000 0.00 0.00 0.00 2.90
2208 4679 1.530771 CCTCCCAAGCTCCATGAGG 59.469 63.158 0.00 7.03 36.92 3.86
2209 4680 1.530771 CTCCCAAGCTCCATGAGGG 59.469 63.158 0.00 0.00 40.98 4.30
2210 4681 2.123982 CCCAAGCTCCATGAGGGC 60.124 66.667 0.00 0.00 36.21 5.19
2211 4682 2.679092 CCAAGCTCCATGAGGGCA 59.321 61.111 8.50 0.00 34.63 5.36
2212 4683 1.229359 CCAAGCTCCATGAGGGCAT 59.771 57.895 8.50 0.00 34.63 4.40
2221 4692 3.127099 ATGAGGGCATGAGCAATGG 57.873 52.632 0.00 0.00 44.61 3.16
2222 4693 0.260816 ATGAGGGCATGAGCAATGGT 59.739 50.000 0.00 0.00 44.61 3.55
2223 4694 0.918258 TGAGGGCATGAGCAATGGTA 59.082 50.000 0.00 0.00 44.61 3.25
2224 4695 1.134007 TGAGGGCATGAGCAATGGTAG 60.134 52.381 0.00 0.00 44.61 3.18
2225 4696 0.466922 AGGGCATGAGCAATGGTAGC 60.467 55.000 0.00 0.00 44.61 3.58
2226 4697 0.752743 GGGCATGAGCAATGGTAGCA 60.753 55.000 0.00 0.00 44.61 3.49
2227 4698 0.666913 GGCATGAGCAATGGTAGCAG 59.333 55.000 0.00 0.00 44.61 4.24
2228 4699 0.030369 GCATGAGCAATGGTAGCAGC 59.970 55.000 0.00 0.00 41.58 5.25
2229 4700 1.385528 CATGAGCAATGGTAGCAGCA 58.614 50.000 8.62 0.00 32.10 4.41
2230 4701 1.065102 CATGAGCAATGGTAGCAGCAC 59.935 52.381 8.62 3.31 32.10 4.40
2231 4702 0.677731 TGAGCAATGGTAGCAGCACC 60.678 55.000 8.62 0.75 39.20 5.01
2236 4707 2.749682 TGGTAGCAGCACCAGGTG 59.250 61.111 16.16 16.16 43.76 4.00
2237 4708 1.841103 TGGTAGCAGCACCAGGTGA 60.841 57.895 24.96 0.00 43.76 4.02
2238 4709 1.200760 TGGTAGCAGCACCAGGTGAT 61.201 55.000 24.96 15.51 43.76 3.06
2242 4713 2.753043 CAGCACCAGGTGATGCCC 60.753 66.667 24.62 5.46 42.79 5.36
2243 4714 4.052518 AGCACCAGGTGATGCCCC 62.053 66.667 24.96 4.03 43.12 5.80
2244 4715 4.365111 GCACCAGGTGATGCCCCA 62.365 66.667 24.96 0.00 38.26 4.96
2245 4716 2.044650 CACCAGGTGATGCCCCAG 60.045 66.667 15.35 0.00 38.26 4.45
2246 4717 2.532715 ACCAGGTGATGCCCCAGT 60.533 61.111 0.00 0.00 38.26 4.00
2247 4718 2.044650 CCAGGTGATGCCCCAGTG 60.045 66.667 0.00 0.00 38.26 3.66
2248 4719 2.753043 CAGGTGATGCCCCAGTGC 60.753 66.667 0.00 0.00 38.26 4.40
2249 4720 3.259314 AGGTGATGCCCCAGTGCA 61.259 61.111 0.00 0.00 46.94 4.57
2250 4721 3.064324 GGTGATGCCCCAGTGCAC 61.064 66.667 9.40 9.40 45.48 4.57
2251 4722 2.034687 GTGATGCCCCAGTGCACT 59.965 61.111 15.25 15.25 45.48 4.40
2252 4723 2.042831 GTGATGCCCCAGTGCACTC 61.043 63.158 18.64 6.33 45.48 3.51
2253 4724 2.439156 GATGCCCCAGTGCACTCC 60.439 66.667 18.64 6.39 45.48 3.85
2254 4725 3.259314 ATGCCCCAGTGCACTCCA 61.259 61.111 18.64 12.11 45.48 3.86
2255 4726 2.563013 GATGCCCCAGTGCACTCCAT 62.563 60.000 18.64 16.27 45.48 3.41
2256 4727 2.439156 GCCCCAGTGCACTCCATC 60.439 66.667 18.64 3.05 0.00 3.51
2257 4728 2.976490 GCCCCAGTGCACTCCATCT 61.976 63.158 18.64 0.00 0.00 2.90
2258 4729 1.222936 CCCCAGTGCACTCCATCTC 59.777 63.158 18.64 0.00 0.00 2.75
2259 4730 1.556373 CCCCAGTGCACTCCATCTCA 61.556 60.000 18.64 0.00 0.00 3.27
2260 4731 0.107800 CCCAGTGCACTCCATCTCAG 60.108 60.000 18.64 2.65 0.00 3.35
2261 4732 0.743701 CCAGTGCACTCCATCTCAGC 60.744 60.000 18.64 0.00 0.00 4.26
2262 4733 1.082679 CAGTGCACTCCATCTCAGCG 61.083 60.000 18.64 0.00 0.00 5.18
2263 4734 1.216444 GTGCACTCCATCTCAGCGA 59.784 57.895 10.32 0.00 0.00 4.93
2264 4735 0.805322 GTGCACTCCATCTCAGCGAG 60.805 60.000 10.32 0.00 0.00 5.03
2265 4736 0.967380 TGCACTCCATCTCAGCGAGA 60.967 55.000 10.02 10.02 43.20 4.04
2266 4737 0.248990 GCACTCCATCTCAGCGAGAG 60.249 60.000 12.53 8.31 42.26 3.20
2276 4747 2.999507 TCAGCGAGAGAAGACAAGAC 57.000 50.000 0.00 0.00 0.00 3.01
2277 4748 1.542030 TCAGCGAGAGAAGACAAGACC 59.458 52.381 0.00 0.00 0.00 3.85
2278 4749 1.270826 CAGCGAGAGAAGACAAGACCA 59.729 52.381 0.00 0.00 0.00 4.02
2279 4750 1.271102 AGCGAGAGAAGACAAGACCAC 59.729 52.381 0.00 0.00 0.00 4.16
2280 4751 1.970447 CGAGAGAAGACAAGACCACG 58.030 55.000 0.00 0.00 0.00 4.94
2281 4752 1.401670 CGAGAGAAGACAAGACCACGG 60.402 57.143 0.00 0.00 0.00 4.94
2282 4753 1.614413 GAGAGAAGACAAGACCACGGT 59.386 52.381 0.00 0.00 0.00 4.83
2283 4754 2.036089 GAGAGAAGACAAGACCACGGTT 59.964 50.000 0.00 0.00 0.00 4.44
2284 4755 2.135933 GAGAAGACAAGACCACGGTTG 58.864 52.381 0.00 0.00 0.00 3.77
2285 4756 1.485066 AGAAGACAAGACCACGGTTGT 59.515 47.619 0.00 0.00 39.62 3.32
2286 4757 1.597663 GAAGACAAGACCACGGTTGTG 59.402 52.381 0.00 0.00 46.00 3.33
2300 4771 4.637276 ACGGTTGTGACATTGATTACTCA 58.363 39.130 0.00 0.00 0.00 3.41
2301 4772 5.060506 ACGGTTGTGACATTGATTACTCAA 58.939 37.500 0.00 0.00 45.15 3.02
2302 4773 5.049680 ACGGTTGTGACATTGATTACTCAAC 60.050 40.000 0.00 0.00 43.92 3.18
2303 4774 5.382303 GGTTGTGACATTGATTACTCAACG 58.618 41.667 0.00 0.00 43.92 4.10
2304 4775 4.661993 TGTGACATTGATTACTCAACGC 57.338 40.909 0.00 0.00 43.92 4.84
2305 4776 4.314961 TGTGACATTGATTACTCAACGCT 58.685 39.130 0.00 0.00 43.92 5.07
2306 4777 5.474825 TGTGACATTGATTACTCAACGCTA 58.525 37.500 0.00 0.00 43.92 4.26
2307 4778 5.576774 TGTGACATTGATTACTCAACGCTAG 59.423 40.000 0.00 0.00 43.92 3.42
2308 4779 4.566759 TGACATTGATTACTCAACGCTAGC 59.433 41.667 4.06 4.06 43.92 3.42
2309 4780 3.871594 ACATTGATTACTCAACGCTAGCC 59.128 43.478 9.66 0.00 43.92 3.93
2310 4781 3.603158 TTGATTACTCAACGCTAGCCA 57.397 42.857 9.66 0.00 36.46 4.75
2311 4782 2.888594 TGATTACTCAACGCTAGCCAC 58.111 47.619 9.66 0.00 0.00 5.01
2312 4783 2.202566 GATTACTCAACGCTAGCCACC 58.797 52.381 9.66 0.00 0.00 4.61
2313 4784 0.248289 TTACTCAACGCTAGCCACCC 59.752 55.000 9.66 0.00 0.00 4.61
2314 4785 0.613853 TACTCAACGCTAGCCACCCT 60.614 55.000 9.66 0.00 0.00 4.34
2315 4786 1.296715 CTCAACGCTAGCCACCCTT 59.703 57.895 9.66 0.00 0.00 3.95
2316 4787 0.741221 CTCAACGCTAGCCACCCTTC 60.741 60.000 9.66 0.00 0.00 3.46
2317 4788 1.192146 TCAACGCTAGCCACCCTTCT 61.192 55.000 9.66 0.00 0.00 2.85
2318 4789 0.535335 CAACGCTAGCCACCCTTCTA 59.465 55.000 9.66 0.00 0.00 2.10
2319 4790 0.824759 AACGCTAGCCACCCTTCTAG 59.175 55.000 9.66 0.00 36.31 2.43
2320 4791 0.324460 ACGCTAGCCACCCTTCTAGT 60.324 55.000 9.66 0.00 35.80 2.57
2321 4792 0.103208 CGCTAGCCACCCTTCTAGTG 59.897 60.000 9.66 0.00 37.16 2.74
2331 4802 1.132500 CCTTCTAGTGGGACCCATCC 58.868 60.000 18.51 4.50 45.42 3.51
2332 4803 1.344496 CCTTCTAGTGGGACCCATCCT 60.344 57.143 18.51 12.81 45.46 3.24
2333 4804 2.043227 CTTCTAGTGGGACCCATCCTC 58.957 57.143 18.51 3.21 45.46 3.71
2334 4805 1.319947 TCTAGTGGGACCCATCCTCT 58.680 55.000 18.51 11.63 45.46 3.69
2335 4806 2.510330 TCTAGTGGGACCCATCCTCTA 58.490 52.381 18.51 12.18 45.46 2.43
2336 4807 3.072086 TCTAGTGGGACCCATCCTCTAT 58.928 50.000 18.51 0.00 45.46 1.98
2337 4808 2.897823 AGTGGGACCCATCCTCTATT 57.102 50.000 18.51 0.00 45.46 1.73
2338 4809 4.673132 TCTAGTGGGACCCATCCTCTATTA 59.327 45.833 18.51 2.17 45.46 0.98
2339 4810 4.510303 AGTGGGACCCATCCTCTATTAT 57.490 45.455 18.51 0.00 45.46 1.28
2340 4811 4.844348 AGTGGGACCCATCCTCTATTATT 58.156 43.478 18.51 0.00 45.46 1.40
2341 4812 5.235534 AGTGGGACCCATCCTCTATTATTT 58.764 41.667 18.51 0.00 45.46 1.40
2342 4813 6.399013 AGTGGGACCCATCCTCTATTATTTA 58.601 40.000 18.51 0.00 45.46 1.40
2343 4814 6.272558 AGTGGGACCCATCCTCTATTATTTAC 59.727 42.308 18.51 0.00 45.46 2.01
2344 4815 6.272558 GTGGGACCCATCCTCTATTATTTACT 59.727 42.308 18.51 0.00 45.46 2.24
2345 4816 6.500751 TGGGACCCATCCTCTATTATTTACTC 59.499 42.308 9.95 0.00 45.46 2.59
2346 4817 6.500751 GGGACCCATCCTCTATTATTTACTCA 59.499 42.308 5.33 0.00 45.46 3.41
2347 4818 7.017254 GGGACCCATCCTCTATTATTTACTCAA 59.983 40.741 5.33 0.00 45.46 3.02
2348 4819 8.437575 GGACCCATCCTCTATTATTTACTCAAA 58.562 37.037 0.00 0.00 42.45 2.69
2349 4820 9.274206 GACCCATCCTCTATTATTTACTCAAAC 57.726 37.037 0.00 0.00 0.00 2.93
2350 4821 8.778059 ACCCATCCTCTATTATTTACTCAAACA 58.222 33.333 0.00 0.00 0.00 2.83
2351 4822 9.627123 CCCATCCTCTATTATTTACTCAAACAA 57.373 33.333 0.00 0.00 0.00 2.83
2354 4825 9.853177 ATCCTCTATTATTTACTCAAACAAGGG 57.147 33.333 0.00 0.00 0.00 3.95
2355 4826 8.272173 TCCTCTATTATTTACTCAAACAAGGGG 58.728 37.037 0.00 0.00 0.00 4.79
2356 4827 7.013369 CCTCTATTATTTACTCAAACAAGGGGC 59.987 40.741 0.00 0.00 0.00 5.80
2357 4828 7.406916 TCTATTATTTACTCAAACAAGGGGCA 58.593 34.615 0.00 0.00 0.00 5.36
2358 4829 5.715434 TTATTTACTCAAACAAGGGGCAC 57.285 39.130 0.00 0.00 0.00 5.01
2359 4830 2.738587 TTACTCAAACAAGGGGCACA 57.261 45.000 0.00 0.00 0.00 4.57
2360 4831 2.270352 TACTCAAACAAGGGGCACAG 57.730 50.000 0.00 0.00 0.00 3.66
2361 4832 0.468029 ACTCAAACAAGGGGCACAGG 60.468 55.000 0.00 0.00 0.00 4.00
2362 4833 1.809567 CTCAAACAAGGGGCACAGGC 61.810 60.000 0.00 0.00 40.13 4.85
2363 4834 2.132996 CAAACAAGGGGCACAGGCA 61.133 57.895 0.00 0.00 43.71 4.75
2364 4835 1.382420 AAACAAGGGGCACAGGCAA 60.382 52.632 0.00 0.00 43.71 4.52
2365 4836 1.402107 AAACAAGGGGCACAGGCAAG 61.402 55.000 0.00 0.00 43.71 4.01
2366 4837 2.993264 CAAGGGGCACAGGCAAGG 60.993 66.667 0.00 0.00 43.71 3.61
2367 4838 3.511610 AAGGGGCACAGGCAAGGT 61.512 61.111 0.00 0.00 43.71 3.50
2368 4839 3.513750 AAGGGGCACAGGCAAGGTC 62.514 63.158 0.00 0.00 43.71 3.85
2369 4840 4.284550 GGGGCACAGGCAAGGTCA 62.285 66.667 0.00 0.00 43.71 4.02
2370 4841 2.036256 GGGCACAGGCAAGGTCAT 59.964 61.111 0.00 0.00 43.71 3.06
2371 4842 2.048603 GGGCACAGGCAAGGTCATC 61.049 63.158 0.00 0.00 43.71 2.92
2372 4843 2.048603 GGCACAGGCAAGGTCATCC 61.049 63.158 0.00 0.00 43.71 3.51
2373 4844 2.490270 GGCACAGGCAAGGTCATCCT 62.490 60.000 0.00 0.00 43.71 3.24
2374 4845 0.253044 GCACAGGCAAGGTCATCCTA 59.747 55.000 0.00 0.00 44.35 2.94
2375 4846 1.745141 GCACAGGCAAGGTCATCCTAG 60.745 57.143 0.00 0.00 44.35 3.02
2376 4847 0.543749 ACAGGCAAGGTCATCCTAGC 59.456 55.000 0.00 0.00 44.35 3.42
2377 4848 0.179034 CAGGCAAGGTCATCCTAGCC 60.179 60.000 0.00 0.00 44.35 3.93
2378 4849 0.621571 AGGCAAGGTCATCCTAGCCA 60.622 55.000 0.00 0.00 44.35 4.75
2379 4850 0.464554 GGCAAGGTCATCCTAGCCAC 60.465 60.000 0.00 0.00 44.35 5.01
2380 4851 0.543749 GCAAGGTCATCCTAGCCACT 59.456 55.000 0.00 0.00 44.35 4.00
2381 4852 1.065126 GCAAGGTCATCCTAGCCACTT 60.065 52.381 0.00 0.00 44.35 3.16
2382 4853 2.619074 GCAAGGTCATCCTAGCCACTTT 60.619 50.000 0.00 0.00 44.35 2.66
2383 4854 3.274288 CAAGGTCATCCTAGCCACTTTC 58.726 50.000 0.00 0.00 44.35 2.62
2384 4855 2.839228 AGGTCATCCTAGCCACTTTCT 58.161 47.619 0.00 0.00 43.12 2.52
2385 4856 2.769095 AGGTCATCCTAGCCACTTTCTC 59.231 50.000 0.00 0.00 43.12 2.87
2386 4857 2.769095 GGTCATCCTAGCCACTTTCTCT 59.231 50.000 0.00 0.00 0.00 3.10
2387 4858 3.198853 GGTCATCCTAGCCACTTTCTCTT 59.801 47.826 0.00 0.00 0.00 2.85
2388 4859 4.187694 GTCATCCTAGCCACTTTCTCTTG 58.812 47.826 0.00 0.00 0.00 3.02
2389 4860 2.770164 TCCTAGCCACTTTCTCTTGC 57.230 50.000 0.00 0.00 0.00 4.01
2390 4861 2.260822 TCCTAGCCACTTTCTCTTGCT 58.739 47.619 0.00 0.00 36.11 3.91
2391 4862 2.639839 TCCTAGCCACTTTCTCTTGCTT 59.360 45.455 0.00 0.00 33.63 3.91
2392 4863 3.073062 TCCTAGCCACTTTCTCTTGCTTT 59.927 43.478 0.00 0.00 33.63 3.51
2393 4864 3.823304 CCTAGCCACTTTCTCTTGCTTTT 59.177 43.478 0.00 0.00 33.63 2.27
2394 4865 3.998099 AGCCACTTTCTCTTGCTTTTC 57.002 42.857 0.00 0.00 0.00 2.29
2395 4866 2.625314 AGCCACTTTCTCTTGCTTTTCC 59.375 45.455 0.00 0.00 0.00 3.13
2396 4867 2.288457 GCCACTTTCTCTTGCTTTTCCC 60.288 50.000 0.00 0.00 0.00 3.97
2397 4868 3.225940 CCACTTTCTCTTGCTTTTCCCT 58.774 45.455 0.00 0.00 0.00 4.20
2398 4869 3.254411 CCACTTTCTCTTGCTTTTCCCTC 59.746 47.826 0.00 0.00 0.00 4.30
2399 4870 4.140536 CACTTTCTCTTGCTTTTCCCTCT 58.859 43.478 0.00 0.00 0.00 3.69
2400 4871 4.582240 CACTTTCTCTTGCTTTTCCCTCTT 59.418 41.667 0.00 0.00 0.00 2.85
2401 4872 5.068329 CACTTTCTCTTGCTTTTCCCTCTTT 59.932 40.000 0.00 0.00 0.00 2.52
2402 4873 5.300539 ACTTTCTCTTGCTTTTCCCTCTTTC 59.699 40.000 0.00 0.00 0.00 2.62
2403 4874 4.713792 TCTCTTGCTTTTCCCTCTTTCT 57.286 40.909 0.00 0.00 0.00 2.52
2404 4875 4.646572 TCTCTTGCTTTTCCCTCTTTCTC 58.353 43.478 0.00 0.00 0.00 2.87
2405 4876 4.349342 TCTCTTGCTTTTCCCTCTTTCTCT 59.651 41.667 0.00 0.00 0.00 3.10
2406 4877 4.646572 TCTTGCTTTTCCCTCTTTCTCTC 58.353 43.478 0.00 0.00 0.00 3.20
2407 4878 3.045601 TGCTTTTCCCTCTTTCTCTCG 57.954 47.619 0.00 0.00 0.00 4.04
2408 4879 1.735018 GCTTTTCCCTCTTTCTCTCGC 59.265 52.381 0.00 0.00 0.00 5.03
2409 4880 2.614229 GCTTTTCCCTCTTTCTCTCGCT 60.614 50.000 0.00 0.00 0.00 4.93
2410 4881 3.669536 CTTTTCCCTCTTTCTCTCGCTT 58.330 45.455 0.00 0.00 0.00 4.68
2411 4882 3.771577 TTTCCCTCTTTCTCTCGCTTT 57.228 42.857 0.00 0.00 0.00 3.51
2412 4883 3.771577 TTCCCTCTTTCTCTCGCTTTT 57.228 42.857 0.00 0.00 0.00 2.27
2413 4884 3.045601 TCCCTCTTTCTCTCGCTTTTG 57.954 47.619 0.00 0.00 0.00 2.44
2414 4885 2.368875 TCCCTCTTTCTCTCGCTTTTGT 59.631 45.455 0.00 0.00 0.00 2.83
2415 4886 2.739379 CCCTCTTTCTCTCGCTTTTGTC 59.261 50.000 0.00 0.00 0.00 3.18
2416 4887 3.393800 CCTCTTTCTCTCGCTTTTGTCA 58.606 45.455 0.00 0.00 0.00 3.58
2417 4888 3.431572 CCTCTTTCTCTCGCTTTTGTCAG 59.568 47.826 0.00 0.00 0.00 3.51
2418 4889 2.802816 TCTTTCTCTCGCTTTTGTCAGC 59.197 45.455 0.00 0.00 36.33 4.26
2419 4890 1.512926 TTCTCTCGCTTTTGTCAGCC 58.487 50.000 0.00 0.00 36.31 4.85
2420 4891 0.392706 TCTCTCGCTTTTGTCAGCCA 59.607 50.000 0.00 0.00 36.31 4.75
2421 4892 1.202639 TCTCTCGCTTTTGTCAGCCAA 60.203 47.619 0.00 0.00 36.31 4.52
2422 4893 1.196354 CTCTCGCTTTTGTCAGCCAAG 59.804 52.381 0.00 0.00 36.31 3.61
2423 4894 1.202639 TCTCGCTTTTGTCAGCCAAGA 60.203 47.619 0.00 0.00 36.31 3.02
2424 4895 1.196354 CTCGCTTTTGTCAGCCAAGAG 59.804 52.381 0.00 0.00 38.11 2.85
2425 4896 1.202639 TCGCTTTTGTCAGCCAAGAGA 60.203 47.619 0.00 0.00 37.44 3.10
2426 4897 1.069636 CGCTTTTGTCAGCCAAGAGAC 60.070 52.381 0.00 0.00 37.44 3.36
2427 4898 1.069636 GCTTTTGTCAGCCAAGAGACG 60.070 52.381 0.00 0.00 37.44 4.18
2428 4899 1.532868 CTTTTGTCAGCCAAGAGACGG 59.467 52.381 0.00 0.00 37.44 4.79
2429 4900 0.250295 TTTGTCAGCCAAGAGACGGG 60.250 55.000 0.00 0.00 37.58 5.28
2430 4901 1.407656 TTGTCAGCCAAGAGACGGGT 61.408 55.000 0.00 0.00 37.58 5.28
2431 4902 1.371558 GTCAGCCAAGAGACGGGTT 59.628 57.895 0.00 0.00 29.87 4.11
2432 4903 0.670854 GTCAGCCAAGAGACGGGTTC 60.671 60.000 0.00 0.00 29.87 3.62
2433 4904 0.832135 TCAGCCAAGAGACGGGTTCT 60.832 55.000 0.00 0.00 37.23 3.01
2434 4905 0.035458 CAGCCAAGAGACGGGTTCTT 59.965 55.000 0.00 0.00 33.22 2.52
2435 4906 0.321996 AGCCAAGAGACGGGTTCTTC 59.678 55.000 0.00 0.00 33.22 2.87
2436 4907 0.321996 GCCAAGAGACGGGTTCTTCT 59.678 55.000 0.00 0.00 33.22 2.85
2437 4908 1.941668 GCCAAGAGACGGGTTCTTCTG 60.942 57.143 0.00 0.00 33.22 3.02
2438 4909 1.433534 CAAGAGACGGGTTCTTCTGC 58.566 55.000 0.00 0.00 33.22 4.26
2439 4910 1.048601 AAGAGACGGGTTCTTCTGCA 58.951 50.000 0.00 0.00 33.22 4.41
2440 4911 0.605589 AGAGACGGGTTCTTCTGCAG 59.394 55.000 7.63 7.63 33.22 4.41
2441 4912 0.603569 GAGACGGGTTCTTCTGCAGA 59.396 55.000 13.74 13.74 33.22 4.26
2442 4913 1.000955 GAGACGGGTTCTTCTGCAGAA 59.999 52.381 26.87 26.87 39.39 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 4.087892 CCTCCAGTCCGGGTGCTG 62.088 72.222 0.00 8.11 34.36 4.41
211 212 4.120331 CCCCGTCGTCACCGTACC 62.120 72.222 0.00 0.00 35.01 3.34
218 219 2.362503 ATGAGCTCCCCGTCGTCA 60.363 61.111 12.15 0.00 0.00 4.35
259 260 0.110373 CGACACCTTGTAAAAGCGGC 60.110 55.000 0.00 0.00 0.00 6.53
265 266 2.030007 CGGTACCTCGACACCTTGTAAA 60.030 50.000 10.90 0.00 32.29 2.01
292 293 0.661483 GAACGCTGCAACCTCAAAGC 60.661 55.000 0.00 0.00 0.00 3.51
355 384 5.120830 AGCTTTTCAACGACATTGCTAGTAG 59.879 40.000 0.00 0.00 38.29 2.57
356 385 4.994852 AGCTTTTCAACGACATTGCTAGTA 59.005 37.500 0.00 0.00 38.29 1.82
357 386 3.815401 AGCTTTTCAACGACATTGCTAGT 59.185 39.130 0.00 0.00 38.29 2.57
468 497 3.259123 AGTCCCAGCATCAAAATTCAACC 59.741 43.478 0.00 0.00 0.00 3.77
472 501 5.504665 CGTCATAGTCCCAGCATCAAAATTC 60.505 44.000 0.00 0.00 0.00 2.17
473 502 4.336433 CGTCATAGTCCCAGCATCAAAATT 59.664 41.667 0.00 0.00 0.00 1.82
475 504 3.270027 CGTCATAGTCCCAGCATCAAAA 58.730 45.455 0.00 0.00 0.00 2.44
479 508 2.288273 GGTACGTCATAGTCCCAGCATC 60.288 54.545 0.00 0.00 0.00 3.91
480 509 1.687123 GGTACGTCATAGTCCCAGCAT 59.313 52.381 0.00 0.00 0.00 3.79
481 510 1.108776 GGTACGTCATAGTCCCAGCA 58.891 55.000 0.00 0.00 0.00 4.41
512 550 1.991230 CGTTGGGGGAGGTCTTCAT 59.009 57.895 0.00 0.00 0.00 2.57
551 589 8.148807 ACCTTTATTTACAAAACCAAACATGC 57.851 30.769 0.00 0.00 0.00 4.06
559 653 5.403166 GGCGTGAACCTTTATTTACAAAACC 59.597 40.000 0.00 0.00 0.00 3.27
569 663 1.165270 GCTGTGGCGTGAACCTTTAT 58.835 50.000 0.00 0.00 0.00 1.40
570 664 0.179043 TGCTGTGGCGTGAACCTTTA 60.179 50.000 0.00 0.00 42.25 1.85
571 665 1.453015 TGCTGTGGCGTGAACCTTT 60.453 52.632 0.00 0.00 42.25 3.11
572 666 2.186826 GTGCTGTGGCGTGAACCTT 61.187 57.895 0.00 0.00 42.25 3.50
581 675 1.379044 ATGCCTAAGGTGCTGTGGC 60.379 57.895 0.00 0.00 43.49 5.01
596 690 5.501715 CATGTCAACTACCGTAATTCATGC 58.498 41.667 0.00 0.00 0.00 4.06
599 693 3.936453 GCCATGTCAACTACCGTAATTCA 59.064 43.478 0.00 0.00 0.00 2.57
601 695 2.933906 CGCCATGTCAACTACCGTAATT 59.066 45.455 0.00 0.00 0.00 1.40
602 696 2.546778 CGCCATGTCAACTACCGTAAT 58.453 47.619 0.00 0.00 0.00 1.89
603 697 1.404449 CCGCCATGTCAACTACCGTAA 60.404 52.381 0.00 0.00 0.00 3.18
604 698 0.173935 CCGCCATGTCAACTACCGTA 59.826 55.000 0.00 0.00 0.00 4.02
605 699 1.079405 CCGCCATGTCAACTACCGT 60.079 57.895 0.00 0.00 0.00 4.83
608 702 2.461110 CGCCCGCCATGTCAACTAC 61.461 63.158 0.00 0.00 0.00 2.73
609 703 2.125310 CGCCCGCCATGTCAACTA 60.125 61.111 0.00 0.00 0.00 2.24
610 704 3.958147 CTCGCCCGCCATGTCAACT 62.958 63.158 0.00 0.00 0.00 3.16
611 705 3.499737 CTCGCCCGCCATGTCAAC 61.500 66.667 0.00 0.00 0.00 3.18
630 835 4.436998 CCAGTCGACCTGCCCGTC 62.437 72.222 13.01 0.00 40.06 4.79
632 837 4.436998 GACCAGTCGACCTGCCCG 62.437 72.222 13.01 0.78 40.06 6.13
646 851 2.287103 GTCAGTTTGACTGGTTTCGACC 59.713 50.000 8.11 0.00 45.94 4.79
650 855 3.541632 TCTGGTCAGTTTGACTGGTTTC 58.458 45.455 8.11 0.00 45.94 2.78
657 862 2.681344 ACCGTTTTCTGGTCAGTTTGAC 59.319 45.455 0.62 0.62 46.23 3.18
665 870 7.248437 CCATAAGAAATAACCGTTTTCTGGTC 58.752 38.462 0.03 0.00 41.38 4.02
676 881 8.541899 TTTACCCATTCCCATAAGAAATAACC 57.458 34.615 0.00 0.00 0.00 2.85
682 934 5.254267 TGACCTTTACCCATTCCCATAAGAA 59.746 40.000 0.00 0.00 0.00 2.52
684 936 5.124036 TGACCTTTACCCATTCCCATAAG 57.876 43.478 0.00 0.00 0.00 1.73
697 949 5.411669 ACAAATCCAATCGACTGACCTTTAC 59.588 40.000 0.00 0.00 0.00 2.01
700 952 4.021102 ACAAATCCAATCGACTGACCTT 57.979 40.909 0.00 0.00 0.00 3.50
701 953 3.703001 ACAAATCCAATCGACTGACCT 57.297 42.857 0.00 0.00 0.00 3.85
727 979 3.275999 CCGGGAAACAATCGATTAACCT 58.724 45.455 10.97 0.00 0.00 3.50
751 1003 0.389426 CTGCTGCTTTGCCATCCAAC 60.389 55.000 0.00 0.00 31.97 3.77
777 1029 8.349983 CAATTTCTTTAGAGGGTCGAAGAAAAA 58.650 33.333 17.37 5.01 41.67 1.94
778 1030 7.501225 ACAATTTCTTTAGAGGGTCGAAGAAAA 59.499 33.333 17.37 8.09 41.67 2.29
779 1031 6.996282 ACAATTTCTTTAGAGGGTCGAAGAAA 59.004 34.615 16.49 16.49 42.07 2.52
780 1032 6.531021 ACAATTTCTTTAGAGGGTCGAAGAA 58.469 36.000 0.00 0.00 39.69 2.52
781 1033 6.110411 ACAATTTCTTTAGAGGGTCGAAGA 57.890 37.500 0.00 0.00 0.00 2.87
782 1034 6.401153 CGAACAATTTCTTTAGAGGGTCGAAG 60.401 42.308 0.00 0.00 0.00 3.79
783 1035 5.407387 CGAACAATTTCTTTAGAGGGTCGAA 59.593 40.000 0.00 0.00 0.00 3.71
784 1036 4.927425 CGAACAATTTCTTTAGAGGGTCGA 59.073 41.667 0.00 0.00 0.00 4.20
785 1037 4.689345 ACGAACAATTTCTTTAGAGGGTCG 59.311 41.667 0.00 0.00 0.00 4.79
786 1038 6.017357 ACAACGAACAATTTCTTTAGAGGGTC 60.017 38.462 0.00 0.00 0.00 4.46
787 1039 5.826208 ACAACGAACAATTTCTTTAGAGGGT 59.174 36.000 0.00 0.00 0.00 4.34
788 1040 6.204882 AGACAACGAACAATTTCTTTAGAGGG 59.795 38.462 0.00 0.00 0.00 4.30
789 1041 7.190920 AGACAACGAACAATTTCTTTAGAGG 57.809 36.000 0.00 0.00 0.00 3.69
790 1042 7.798982 GGAAGACAACGAACAATTTCTTTAGAG 59.201 37.037 0.00 0.00 0.00 2.43
791 1043 7.497909 AGGAAGACAACGAACAATTTCTTTAGA 59.502 33.333 0.00 0.00 0.00 2.10
792 1044 7.639945 AGGAAGACAACGAACAATTTCTTTAG 58.360 34.615 0.00 0.00 0.00 1.85
793 1045 7.255001 GGAGGAAGACAACGAACAATTTCTTTA 60.255 37.037 0.00 0.00 0.00 1.85
807 1059 0.173708 ATCGCGAGGAGGAAGACAAC 59.826 55.000 16.66 0.00 0.00 3.32
810 1062 1.562017 GAAATCGCGAGGAGGAAGAC 58.438 55.000 16.66 0.00 0.00 3.01
822 1074 1.743394 AGGGGTTCAAATCGAAATCGC 59.257 47.619 0.00 0.00 39.60 4.58
824 1076 5.393135 GGAAGAAGGGGTTCAAATCGAAATC 60.393 44.000 0.00 0.00 34.69 2.17
829 1081 3.010420 GAGGAAGAAGGGGTTCAAATCG 58.990 50.000 0.00 0.00 0.00 3.34
833 1085 1.705186 CCAGAGGAAGAAGGGGTTCAA 59.295 52.381 0.00 0.00 0.00 2.69
835 1087 0.034960 GCCAGAGGAAGAAGGGGTTC 60.035 60.000 0.00 0.00 0.00 3.62
841 1093 1.204113 AGGGTGGCCAGAGGAAGAAG 61.204 60.000 5.11 0.00 0.00 2.85
870 1122 2.435059 GGAGACTGGCAGTTCGGC 60.435 66.667 22.98 8.86 41.67 5.54
871 1123 0.035458 AAAGGAGACTGGCAGTTCGG 59.965 55.000 22.98 0.00 42.68 4.30
873 1125 0.877743 GCAAAGGAGACTGGCAGTTC 59.122 55.000 22.98 18.99 42.68 3.01
874 1126 0.538287 GGCAAAGGAGACTGGCAGTT 60.538 55.000 22.98 11.65 42.68 3.16
875 1127 1.073897 GGCAAAGGAGACTGGCAGT 59.926 57.895 22.26 22.26 42.68 4.40
876 1128 1.676967 GGGCAAAGGAGACTGGCAG 60.677 63.158 14.16 14.16 42.68 4.85
877 1129 1.719063 AAGGGCAAAGGAGACTGGCA 61.719 55.000 0.00 0.00 42.68 4.92
879 1163 0.610232 CCAAGGGCAAAGGAGACTGG 60.610 60.000 0.00 0.00 42.68 4.00
883 1167 1.125093 TCGACCAAGGGCAAAGGAGA 61.125 55.000 0.00 0.00 0.00 3.71
890 1174 4.351938 CGTCGTCGACCAAGGGCA 62.352 66.667 19.29 0.00 39.71 5.36
895 1179 3.033764 GCAAGCGTCGTCGACCAA 61.034 61.111 19.29 0.00 39.71 3.67
916 1200 3.681835 GCGGGGTGTCGAGACAGT 61.682 66.667 15.28 0.00 42.74 3.55
921 1205 3.952628 GAAAGGGCGGGGTGTCGAG 62.953 68.421 0.00 0.00 0.00 4.04
922 1206 4.011517 GAAAGGGCGGGGTGTCGA 62.012 66.667 0.00 0.00 0.00 4.20
925 1209 3.647771 GAGGAAAGGGCGGGGTGT 61.648 66.667 0.00 0.00 0.00 4.16
926 1210 3.646715 TGAGGAAAGGGCGGGGTG 61.647 66.667 0.00 0.00 0.00 4.61
927 1211 3.647771 GTGAGGAAAGGGCGGGGT 61.648 66.667 0.00 0.00 0.00 4.95
933 1888 1.224592 CCCGATGGTGAGGAAAGGG 59.775 63.158 0.00 0.00 0.00 3.95
937 1892 1.299648 CAAGCCCGATGGTGAGGAA 59.700 57.895 0.00 0.00 0.00 3.36
938 1893 2.989639 CAAGCCCGATGGTGAGGA 59.010 61.111 0.00 0.00 0.00 3.71
961 1916 2.844839 GTAGGGATGGCCGGAGCT 60.845 66.667 5.05 0.00 39.73 4.09
1490 3668 7.414984 GCCTCTGAATTTTTCTGTATCTGAAGG 60.415 40.741 0.00 0.00 0.00 3.46
1539 3717 5.819059 ACTAGCAAACGCACTATCTAGTAC 58.181 41.667 0.00 0.00 36.10 2.73
1540 3718 6.127814 ACAACTAGCAAACGCACTATCTAGTA 60.128 38.462 0.00 0.00 36.64 1.82
1541 3719 4.985538 ACTAGCAAACGCACTATCTAGT 57.014 40.909 0.00 0.00 36.90 2.57
1542 3720 5.103000 ACAACTAGCAAACGCACTATCTAG 58.897 41.667 0.00 0.00 0.00 2.43
1544 3722 3.926616 ACAACTAGCAAACGCACTATCT 58.073 40.909 0.00 0.00 0.00 1.98
1545 3723 5.968387 ATACAACTAGCAAACGCACTATC 57.032 39.130 0.00 0.00 0.00 2.08
1547 3725 5.803461 CAGTATACAACTAGCAAACGCACTA 59.197 40.000 5.50 0.00 35.76 2.74
1598 3778 9.494271 GCATCTGACCAATCTCTGTTTTATATA 57.506 33.333 0.00 0.00 0.00 0.86
1599 3779 8.216423 AGCATCTGACCAATCTCTGTTTTATAT 58.784 33.333 0.00 0.00 0.00 0.86
1600 3780 7.496920 CAGCATCTGACCAATCTCTGTTTTATA 59.503 37.037 0.00 0.00 32.44 0.98
1601 3781 6.318144 CAGCATCTGACCAATCTCTGTTTTAT 59.682 38.462 0.00 0.00 32.44 1.40
1602 3782 5.645067 CAGCATCTGACCAATCTCTGTTTTA 59.355 40.000 0.00 0.00 32.44 1.52
1603 3783 4.458295 CAGCATCTGACCAATCTCTGTTTT 59.542 41.667 0.00 0.00 32.44 2.43
1604 3784 4.008330 CAGCATCTGACCAATCTCTGTTT 58.992 43.478 0.00 0.00 32.44 2.83
1605 3785 3.607741 CAGCATCTGACCAATCTCTGTT 58.392 45.455 0.00 0.00 32.44 3.16
1606 3786 2.093075 CCAGCATCTGACCAATCTCTGT 60.093 50.000 0.00 0.00 32.44 3.41
1607 3787 2.562635 CCAGCATCTGACCAATCTCTG 58.437 52.381 0.00 0.00 32.44 3.35
1608 3788 1.489649 CCCAGCATCTGACCAATCTCT 59.510 52.381 0.00 0.00 32.44 3.10
1609 3789 1.211457 ACCCAGCATCTGACCAATCTC 59.789 52.381 0.00 0.00 32.44 2.75
1610 3790 1.293062 ACCCAGCATCTGACCAATCT 58.707 50.000 0.00 0.00 32.44 2.40
1611 3791 2.134789 AACCCAGCATCTGACCAATC 57.865 50.000 0.00 0.00 32.44 2.67
1612 3792 3.737559 TTAACCCAGCATCTGACCAAT 57.262 42.857 0.00 0.00 32.44 3.16
1616 3796 5.036117 TCCTAATTAACCCAGCATCTGAC 57.964 43.478 0.00 0.00 32.44 3.51
1620 3800 6.930731 TGTTTTTCCTAATTAACCCAGCATC 58.069 36.000 0.00 0.00 0.00 3.91
1634 3814 7.552687 CAGTGGCTATATGAACTGTTTTTCCTA 59.447 37.037 0.00 0.00 36.20 2.94
1689 3873 4.828387 AGAAACCTATTGCCGTTACCAAAA 59.172 37.500 0.00 0.00 0.00 2.44
1692 3876 3.340034 CAGAAACCTATTGCCGTTACCA 58.660 45.455 0.00 0.00 0.00 3.25
1693 3877 2.096980 GCAGAAACCTATTGCCGTTACC 59.903 50.000 0.00 0.00 31.79 2.85
1694 3878 3.007635 AGCAGAAACCTATTGCCGTTAC 58.992 45.455 0.00 0.00 38.58 2.50
1695 3879 3.055385 AGAGCAGAAACCTATTGCCGTTA 60.055 43.478 0.00 0.00 38.58 3.18
1717 4114 3.086391 GCATCCAGAGGCTCGAGCA 62.086 63.158 36.27 17.26 44.36 4.26
1721 4118 2.588314 GCTGCATCCAGAGGCTCG 60.588 66.667 9.22 4.13 41.77 5.03
1730 4127 1.093159 CTCCTCAACAAGCTGCATCC 58.907 55.000 1.02 0.00 0.00 3.51
1735 4132 0.322008 GTCCCCTCCTCAACAAGCTG 60.322 60.000 0.00 0.00 0.00 4.24
1764 4161 2.305927 AGTTTGGGTCCTCTATGGTGTG 59.694 50.000 0.00 0.00 37.07 3.82
1765 4162 2.572104 GAGTTTGGGTCCTCTATGGTGT 59.428 50.000 0.00 0.00 37.07 4.16
1766 4163 2.840651 AGAGTTTGGGTCCTCTATGGTG 59.159 50.000 0.00 0.00 36.30 4.17
1767 4164 2.840651 CAGAGTTTGGGTCCTCTATGGT 59.159 50.000 0.00 0.00 35.90 3.55
1815 4279 6.708054 CCTAGGCTAATTACTCTCAACAATGG 59.292 42.308 0.00 0.00 0.00 3.16
1817 4281 7.676683 TCCTAGGCTAATTACTCTCAACAAT 57.323 36.000 2.96 0.00 0.00 2.71
1820 4284 7.533289 AGATCCTAGGCTAATTACTCTCAAC 57.467 40.000 2.96 0.00 0.00 3.18
1828 4292 6.497259 CCACACCTAAGATCCTAGGCTAATTA 59.503 42.308 16.14 0.00 42.09 1.40
1829 4293 5.308237 CCACACCTAAGATCCTAGGCTAATT 59.692 44.000 16.14 0.00 42.09 1.40
1830 4294 4.841246 CCACACCTAAGATCCTAGGCTAAT 59.159 45.833 16.14 0.00 42.09 1.73
1831 4295 4.223953 CCACACCTAAGATCCTAGGCTAA 58.776 47.826 16.14 0.00 42.09 3.09
1832 4296 3.206866 ACCACACCTAAGATCCTAGGCTA 59.793 47.826 16.14 0.00 42.09 3.93
1833 4297 2.022918 ACCACACCTAAGATCCTAGGCT 60.023 50.000 16.14 0.00 42.09 4.58
1834 4298 2.103263 CACCACACCTAAGATCCTAGGC 59.897 54.545 16.14 0.00 42.09 3.93
1835 4299 3.375699 ACACCACACCTAAGATCCTAGG 58.624 50.000 14.85 14.85 43.70 3.02
1836 4300 4.282496 AGACACCACACCTAAGATCCTAG 58.718 47.826 0.00 0.00 0.00 3.02
1837 4301 4.332683 AGACACCACACCTAAGATCCTA 57.667 45.455 0.00 0.00 0.00 2.94
1838 4302 3.191888 AGACACCACACCTAAGATCCT 57.808 47.619 0.00 0.00 0.00 3.24
1839 4303 5.615925 ATTAGACACCACACCTAAGATCC 57.384 43.478 0.00 0.00 0.00 3.36
1840 4304 6.758886 CAGAATTAGACACCACACCTAAGATC 59.241 42.308 0.00 0.00 0.00 2.75
1841 4305 6.213600 ACAGAATTAGACACCACACCTAAGAT 59.786 38.462 0.00 0.00 0.00 2.40
1842 4306 5.542635 ACAGAATTAGACACCACACCTAAGA 59.457 40.000 0.00 0.00 0.00 2.10
1843 4307 5.794894 ACAGAATTAGACACCACACCTAAG 58.205 41.667 0.00 0.00 0.00 2.18
1844 4308 5.542635 AGACAGAATTAGACACCACACCTAA 59.457 40.000 0.00 0.00 0.00 2.69
1845 4309 5.084519 AGACAGAATTAGACACCACACCTA 58.915 41.667 0.00 0.00 0.00 3.08
1846 4310 3.904339 AGACAGAATTAGACACCACACCT 59.096 43.478 0.00 0.00 0.00 4.00
1847 4311 4.273148 AGACAGAATTAGACACCACACC 57.727 45.455 0.00 0.00 0.00 4.16
1848 4312 6.253727 CGATAAGACAGAATTAGACACCACAC 59.746 42.308 0.00 0.00 0.00 3.82
1849 4313 6.330278 CGATAAGACAGAATTAGACACCACA 58.670 40.000 0.00 0.00 0.00 4.17
1850 4314 5.232414 GCGATAAGACAGAATTAGACACCAC 59.768 44.000 0.00 0.00 0.00 4.16
1851 4315 5.348986 GCGATAAGACAGAATTAGACACCA 58.651 41.667 0.00 0.00 0.00 4.17
1852 4316 4.745620 GGCGATAAGACAGAATTAGACACC 59.254 45.833 0.00 0.00 0.00 4.16
1853 4317 4.745620 GGGCGATAAGACAGAATTAGACAC 59.254 45.833 0.00 0.00 0.00 3.67
1854 4318 4.404394 TGGGCGATAAGACAGAATTAGACA 59.596 41.667 0.00 0.00 0.00 3.41
1855 4319 4.945246 TGGGCGATAAGACAGAATTAGAC 58.055 43.478 0.00 0.00 0.00 2.59
1856 4320 5.105106 TGTTGGGCGATAAGACAGAATTAGA 60.105 40.000 0.00 0.00 0.00 2.10
1857 4321 5.116180 TGTTGGGCGATAAGACAGAATTAG 58.884 41.667 0.00 0.00 0.00 1.73
1858 4322 5.092554 TGTTGGGCGATAAGACAGAATTA 57.907 39.130 0.00 0.00 0.00 1.40
1859 4323 3.950397 TGTTGGGCGATAAGACAGAATT 58.050 40.909 0.00 0.00 0.00 2.17
1860 4324 3.627395 TGTTGGGCGATAAGACAGAAT 57.373 42.857 0.00 0.00 0.00 2.40
1861 4325 3.410631 TTGTTGGGCGATAAGACAGAA 57.589 42.857 0.00 0.00 0.00 3.02
1862 4326 3.197766 AGATTGTTGGGCGATAAGACAGA 59.802 43.478 0.00 0.00 0.00 3.41
1863 4327 3.310774 CAGATTGTTGGGCGATAAGACAG 59.689 47.826 0.00 0.00 0.00 3.51
1864 4328 3.055458 TCAGATTGTTGGGCGATAAGACA 60.055 43.478 0.00 0.00 0.00 3.41
1865 4329 3.531538 TCAGATTGTTGGGCGATAAGAC 58.468 45.455 0.00 0.00 0.00 3.01
1866 4330 3.904800 TCAGATTGTTGGGCGATAAGA 57.095 42.857 0.00 0.00 0.00 2.10
1867 4331 5.066375 TCAAATCAGATTGTTGGGCGATAAG 59.934 40.000 0.00 0.00 0.00 1.73
1868 4332 4.946772 TCAAATCAGATTGTTGGGCGATAA 59.053 37.500 0.00 0.00 0.00 1.75
1869 4333 4.522114 TCAAATCAGATTGTTGGGCGATA 58.478 39.130 0.00 0.00 0.00 2.92
1870 4334 3.355378 TCAAATCAGATTGTTGGGCGAT 58.645 40.909 0.00 0.00 0.00 4.58
1871 4335 2.749076 CTCAAATCAGATTGTTGGGCGA 59.251 45.455 0.00 0.00 0.00 5.54
1872 4336 2.489329 ACTCAAATCAGATTGTTGGGCG 59.511 45.455 0.00 0.00 0.00 6.13
1873 4337 3.119352 GGACTCAAATCAGATTGTTGGGC 60.119 47.826 0.00 0.00 0.00 5.36
1874 4338 4.338879 AGGACTCAAATCAGATTGTTGGG 58.661 43.478 0.00 0.00 0.00 4.12
1875 4339 5.242393 ACAAGGACTCAAATCAGATTGTTGG 59.758 40.000 0.00 0.00 0.00 3.77
1876 4340 6.323203 ACAAGGACTCAAATCAGATTGTTG 57.677 37.500 0.00 0.00 0.00 3.33
1877 4341 9.739276 TTATACAAGGACTCAAATCAGATTGTT 57.261 29.630 0.00 0.00 32.38 2.83
1878 4342 9.739276 TTTATACAAGGACTCAAATCAGATTGT 57.261 29.630 0.00 0.00 34.33 2.71
1890 4354 6.655425 AGAGCAAAAGGTTTATACAAGGACTC 59.345 38.462 0.00 0.00 0.00 3.36
1896 4360 7.231467 AGAAGGAGAGCAAAAGGTTTATACAA 58.769 34.615 0.00 0.00 0.00 2.41
1920 4384 7.254966 GGCTCATGACGTATCCTATCTGTATAG 60.255 44.444 0.00 0.00 35.73 1.31
1927 4391 4.944930 AGTAGGCTCATGACGTATCCTATC 59.055 45.833 0.00 0.00 0.00 2.08
1935 4399 6.902771 ATTATCTTAGTAGGCTCATGACGT 57.097 37.500 0.00 0.00 0.00 4.34
1985 4455 9.089601 CAAAACTCTAAAACGGTGGTTATTTTT 57.910 29.630 0.00 0.00 34.62 1.94
1995 4465 3.888583 TGGTCCAAAACTCTAAAACGGT 58.111 40.909 0.00 0.00 0.00 4.83
1998 4468 8.766000 TTTTTCTTGGTCCAAAACTCTAAAAC 57.234 30.769 5.64 0.00 0.00 2.43
2022 4492 9.148104 GTAGTTTACGGTATCTGATCTGTTTTT 57.852 33.333 0.00 0.00 0.00 1.94
2023 4493 7.763071 GGTAGTTTACGGTATCTGATCTGTTTT 59.237 37.037 0.00 0.00 0.00 2.43
2024 4494 7.263496 GGTAGTTTACGGTATCTGATCTGTTT 58.737 38.462 0.00 0.00 0.00 2.83
2077 4548 0.755686 ATCTCAAGGATCACGAGGGC 59.244 55.000 0.00 0.00 0.00 5.19
2112 4583 1.538950 CTCTTCAACCAAGCCTTCAGC 59.461 52.381 0.00 0.00 44.25 4.26
2120 4591 5.702670 TCAGAGTAATTGCTCTTCAACCAAG 59.297 40.000 21.85 9.55 42.69 3.61
2152 4623 0.615261 GGTCCCGTCCTCTTCCTTCT 60.615 60.000 0.00 0.00 0.00 2.85
2167 4638 2.632377 ACATGACAACATCATCGGTCC 58.368 47.619 0.00 0.00 45.52 4.46
2171 4642 3.797039 AGGGTACATGACAACATCATCG 58.203 45.455 0.00 0.00 45.52 3.84
2179 4650 1.004277 GCTTGGGAGGGTACATGACAA 59.996 52.381 0.00 0.00 0.00 3.18
2184 4655 0.253160 TGGAGCTTGGGAGGGTACAT 60.253 55.000 0.00 0.00 0.00 2.29
2186 4657 0.181350 CATGGAGCTTGGGAGGGTAC 59.819 60.000 0.00 0.00 0.00 3.34
2207 4678 0.752743 TGCTACCATTGCTCATGCCC 60.753 55.000 0.00 0.00 38.71 5.36
2208 4679 0.666913 CTGCTACCATTGCTCATGCC 59.333 55.000 0.00 0.00 38.71 4.40
2209 4680 0.030369 GCTGCTACCATTGCTCATGC 59.970 55.000 0.00 0.00 40.20 4.06
2210 4681 1.065102 GTGCTGCTACCATTGCTCATG 59.935 52.381 0.00 0.00 0.00 3.07
2211 4682 1.386533 GTGCTGCTACCATTGCTCAT 58.613 50.000 0.00 0.00 0.00 2.90
2212 4683 0.677731 GGTGCTGCTACCATTGCTCA 60.678 55.000 13.89 0.00 40.54 4.26
2213 4684 0.677731 TGGTGCTGCTACCATTGCTC 60.678 55.000 16.47 0.00 45.46 4.26
2214 4685 1.379916 TGGTGCTGCTACCATTGCT 59.620 52.632 16.47 0.00 45.46 3.91
2215 4686 4.001248 TGGTGCTGCTACCATTGC 57.999 55.556 16.47 0.00 45.46 3.56
2220 4691 0.745845 CATCACCTGGTGCTGCTACC 60.746 60.000 22.02 12.44 41.24 3.18
2221 4692 2.772739 CATCACCTGGTGCTGCTAC 58.227 57.895 22.02 0.00 32.98 3.58
2225 4696 2.753043 GGGCATCACCTGGTGCTG 60.753 66.667 22.88 22.88 41.04 4.41
2226 4697 4.052518 GGGGCATCACCTGGTGCT 62.053 66.667 22.02 9.94 41.04 4.40
2227 4698 4.365111 TGGGGCATCACCTGGTGC 62.365 66.667 22.02 10.55 40.55 5.01
2228 4699 2.044650 CTGGGGCATCACCTGGTG 60.045 66.667 20.86 20.86 39.10 4.17
2229 4700 2.532715 ACTGGGGCATCACCTGGT 60.533 61.111 0.00 0.00 39.10 4.00
2230 4701 2.044650 CACTGGGGCATCACCTGG 60.045 66.667 0.00 0.00 39.10 4.45
2231 4702 2.753043 GCACTGGGGCATCACCTG 60.753 66.667 0.00 0.00 39.10 4.00
2232 4703 3.259314 TGCACTGGGGCATCACCT 61.259 61.111 0.00 0.00 39.25 4.00
2233 4704 3.064324 GTGCACTGGGGCATCACC 61.064 66.667 10.32 0.00 46.92 4.02
2234 4705 2.034687 AGTGCACTGGGGCATCAC 59.965 61.111 20.97 0.00 46.92 3.06
2235 4706 2.352422 GAGTGCACTGGGGCATCA 59.648 61.111 27.27 0.00 46.92 3.07
2236 4707 2.439156 GGAGTGCACTGGGGCATC 60.439 66.667 27.27 7.86 46.92 3.91
2237 4708 2.563013 GATGGAGTGCACTGGGGCAT 62.563 60.000 27.27 6.05 46.92 4.40
2238 4709 3.259314 ATGGAGTGCACTGGGGCA 61.259 61.111 27.27 1.13 42.53 5.36
2239 4710 2.439156 GATGGAGTGCACTGGGGC 60.439 66.667 27.27 9.66 0.00 5.80
2240 4711 1.222936 GAGATGGAGTGCACTGGGG 59.777 63.158 27.27 0.00 0.00 4.96
2241 4712 0.107800 CTGAGATGGAGTGCACTGGG 60.108 60.000 27.27 1.05 0.00 4.45
2242 4713 0.743701 GCTGAGATGGAGTGCACTGG 60.744 60.000 27.27 4.88 0.00 4.00
2243 4714 1.082679 CGCTGAGATGGAGTGCACTG 61.083 60.000 27.27 8.24 0.00 3.66
2244 4715 1.217511 CGCTGAGATGGAGTGCACT 59.782 57.895 21.88 21.88 0.00 4.40
2245 4716 0.805322 CTCGCTGAGATGGAGTGCAC 60.805 60.000 9.40 9.40 0.00 4.57
2246 4717 0.967380 TCTCGCTGAGATGGAGTGCA 60.967 55.000 4.47 0.00 33.35 4.57
2247 4718 0.248990 CTCTCGCTGAGATGGAGTGC 60.249 60.000 8.38 0.00 45.39 4.40
2248 4719 1.387539 TCTCTCGCTGAGATGGAGTG 58.612 55.000 8.38 0.00 46.03 3.51
2249 4720 3.892633 TCTCTCGCTGAGATGGAGT 57.107 52.632 8.38 0.00 46.03 3.85
2256 4727 2.415357 GGTCTTGTCTTCTCTCGCTGAG 60.415 54.545 0.00 0.00 43.96 3.35
2257 4728 1.542030 GGTCTTGTCTTCTCTCGCTGA 59.458 52.381 0.00 0.00 0.00 4.26
2258 4729 1.270826 TGGTCTTGTCTTCTCTCGCTG 59.729 52.381 0.00 0.00 0.00 5.18
2259 4730 1.271102 GTGGTCTTGTCTTCTCTCGCT 59.729 52.381 0.00 0.00 0.00 4.93
2260 4731 1.704070 GTGGTCTTGTCTTCTCTCGC 58.296 55.000 0.00 0.00 0.00 5.03
2261 4732 1.401670 CCGTGGTCTTGTCTTCTCTCG 60.402 57.143 0.00 0.00 0.00 4.04
2262 4733 1.614413 ACCGTGGTCTTGTCTTCTCTC 59.386 52.381 0.00 0.00 0.00 3.20
2263 4734 1.705873 ACCGTGGTCTTGTCTTCTCT 58.294 50.000 0.00 0.00 0.00 3.10
2264 4735 2.135933 CAACCGTGGTCTTGTCTTCTC 58.864 52.381 0.00 0.00 0.00 2.87
2265 4736 1.485066 ACAACCGTGGTCTTGTCTTCT 59.515 47.619 0.00 0.00 0.00 2.85
2266 4737 1.597663 CACAACCGTGGTCTTGTCTTC 59.402 52.381 0.00 0.00 39.64 2.87
2267 4738 1.208535 TCACAACCGTGGTCTTGTCTT 59.791 47.619 0.00 0.00 43.79 3.01
2268 4739 0.828022 TCACAACCGTGGTCTTGTCT 59.172 50.000 0.00 0.00 43.79 3.41
2269 4740 0.935196 GTCACAACCGTGGTCTTGTC 59.065 55.000 0.00 0.00 43.79 3.18
2270 4741 0.250793 TGTCACAACCGTGGTCTTGT 59.749 50.000 0.00 0.00 43.79 3.16
2271 4742 1.593196 ATGTCACAACCGTGGTCTTG 58.407 50.000 0.00 0.00 43.79 3.02
2272 4743 1.946768 CAATGTCACAACCGTGGTCTT 59.053 47.619 0.00 0.00 43.79 3.01
2273 4744 1.140052 TCAATGTCACAACCGTGGTCT 59.860 47.619 0.00 0.00 43.79 3.85
2274 4745 1.588674 TCAATGTCACAACCGTGGTC 58.411 50.000 0.00 0.00 43.79 4.02
2275 4746 2.270352 ATCAATGTCACAACCGTGGT 57.730 45.000 0.00 0.00 43.79 4.16
2276 4747 3.751175 AGTAATCAATGTCACAACCGTGG 59.249 43.478 0.00 0.00 43.79 4.94
2277 4748 4.450757 TGAGTAATCAATGTCACAACCGTG 59.549 41.667 0.00 0.00 45.08 4.94
2278 4749 4.637276 TGAGTAATCAATGTCACAACCGT 58.363 39.130 0.00 0.00 0.00 4.83
2279 4750 5.382303 GTTGAGTAATCAATGTCACAACCG 58.618 41.667 9.08 0.00 32.98 4.44
2280 4751 5.382303 CGTTGAGTAATCAATGTCACAACC 58.618 41.667 15.33 0.00 34.78 3.77
2281 4752 4.846137 GCGTTGAGTAATCAATGTCACAAC 59.154 41.667 22.22 5.07 38.49 3.32
2282 4753 4.754618 AGCGTTGAGTAATCAATGTCACAA 59.245 37.500 22.22 0.00 38.49 3.33
2283 4754 4.314961 AGCGTTGAGTAATCAATGTCACA 58.685 39.130 22.22 0.00 38.49 3.58
2284 4755 4.928661 AGCGTTGAGTAATCAATGTCAC 57.071 40.909 22.22 9.31 38.49 3.67
2285 4756 4.566759 GCTAGCGTTGAGTAATCAATGTCA 59.433 41.667 22.22 11.90 38.49 3.58
2286 4757 4.025647 GGCTAGCGTTGAGTAATCAATGTC 60.026 45.833 22.22 15.66 38.49 3.06
2287 4758 3.871594 GGCTAGCGTTGAGTAATCAATGT 59.128 43.478 22.22 13.48 38.49 2.71
2288 4759 3.871006 TGGCTAGCGTTGAGTAATCAATG 59.129 43.478 18.46 18.46 39.06 2.82
2289 4760 3.871594 GTGGCTAGCGTTGAGTAATCAAT 59.128 43.478 9.08 0.00 31.79 2.57
2290 4761 3.259064 GTGGCTAGCGTTGAGTAATCAA 58.741 45.455 9.00 0.56 0.00 2.57
2291 4762 2.418197 GGTGGCTAGCGTTGAGTAATCA 60.418 50.000 9.00 0.00 0.00 2.57
2292 4763 2.202566 GGTGGCTAGCGTTGAGTAATC 58.797 52.381 9.00 0.00 0.00 1.75
2293 4764 1.134491 GGGTGGCTAGCGTTGAGTAAT 60.134 52.381 9.00 0.00 0.00 1.89
2294 4765 0.248289 GGGTGGCTAGCGTTGAGTAA 59.752 55.000 9.00 0.00 0.00 2.24
2295 4766 0.613853 AGGGTGGCTAGCGTTGAGTA 60.614 55.000 9.00 0.00 0.00 2.59
2296 4767 1.481056 AAGGGTGGCTAGCGTTGAGT 61.481 55.000 9.00 0.00 31.88 3.41
2297 4768 0.741221 GAAGGGTGGCTAGCGTTGAG 60.741 60.000 12.01 0.00 33.10 3.02
2298 4769 1.192146 AGAAGGGTGGCTAGCGTTGA 61.192 55.000 12.01 0.00 33.10 3.18
2299 4770 0.535335 TAGAAGGGTGGCTAGCGTTG 59.465 55.000 12.01 0.00 33.10 4.10
2300 4771 0.824759 CTAGAAGGGTGGCTAGCGTT 59.175 55.000 9.00 6.93 35.36 4.84
2301 4772 0.324460 ACTAGAAGGGTGGCTAGCGT 60.324 55.000 9.00 0.00 38.08 5.07
2302 4773 0.103208 CACTAGAAGGGTGGCTAGCG 59.897 60.000 9.00 0.00 38.08 4.26
2303 4774 0.466124 CCACTAGAAGGGTGGCTAGC 59.534 60.000 6.04 6.04 45.97 3.42
2309 4780 0.546747 TGGGTCCCACTAGAAGGGTG 60.547 60.000 19.79 0.00 46.82 4.61
2310 4781 0.421904 ATGGGTCCCACTAGAAGGGT 59.578 55.000 14.57 0.00 46.82 4.34
2311 4782 4.660608 AGGATGGGTCCCACTAGAAGGG 62.661 59.091 14.57 16.06 46.34 3.95
2312 4783 1.132500 GGATGGGTCCCACTAGAAGG 58.868 60.000 14.57 0.00 38.69 3.46
2313 4784 2.043227 GAGGATGGGTCCCACTAGAAG 58.957 57.143 14.57 0.00 46.34 2.85
2314 4785 1.651770 AGAGGATGGGTCCCACTAGAA 59.348 52.381 14.57 0.00 46.34 2.10
2315 4786 1.319947 AGAGGATGGGTCCCACTAGA 58.680 55.000 14.57 0.00 46.34 2.43
2316 4787 3.551635 ATAGAGGATGGGTCCCACTAG 57.448 52.381 14.57 0.00 46.34 2.57
2317 4788 5.633473 ATAATAGAGGATGGGTCCCACTA 57.367 43.478 14.57 10.63 46.34 2.74
2318 4789 2.897823 AATAGAGGATGGGTCCCACT 57.102 50.000 14.57 6.77 46.34 4.00
2319 4790 5.584551 AAATAATAGAGGATGGGTCCCAC 57.415 43.478 14.57 7.36 46.34 4.61
2320 4791 6.399013 AGTAAATAATAGAGGATGGGTCCCA 58.601 40.000 14.64 14.64 46.34 4.37
2321 4792 6.500751 TGAGTAAATAATAGAGGATGGGTCCC 59.499 42.308 0.00 0.00 46.34 4.46
2322 4793 7.554959 TGAGTAAATAATAGAGGATGGGTCC 57.445 40.000 0.00 0.00 45.45 4.46
2323 4794 9.274206 GTTTGAGTAAATAATAGAGGATGGGTC 57.726 37.037 0.00 0.00 0.00 4.46
2324 4795 8.778059 TGTTTGAGTAAATAATAGAGGATGGGT 58.222 33.333 0.00 0.00 0.00 4.51
2325 4796 9.627123 TTGTTTGAGTAAATAATAGAGGATGGG 57.373 33.333 0.00 0.00 0.00 4.00
2328 4799 9.853177 CCCTTGTTTGAGTAAATAATAGAGGAT 57.147 33.333 0.00 0.00 0.00 3.24
2329 4800 8.272173 CCCCTTGTTTGAGTAAATAATAGAGGA 58.728 37.037 0.00 0.00 0.00 3.71
2330 4801 7.013369 GCCCCTTGTTTGAGTAAATAATAGAGG 59.987 40.741 0.00 0.00 0.00 3.69
2331 4802 7.556275 TGCCCCTTGTTTGAGTAAATAATAGAG 59.444 37.037 0.00 0.00 0.00 2.43
2332 4803 7.338449 GTGCCCCTTGTTTGAGTAAATAATAGA 59.662 37.037 0.00 0.00 0.00 1.98
2333 4804 7.122055 TGTGCCCCTTGTTTGAGTAAATAATAG 59.878 37.037 0.00 0.00 0.00 1.73
2334 4805 6.948886 TGTGCCCCTTGTTTGAGTAAATAATA 59.051 34.615 0.00 0.00 0.00 0.98
2335 4806 5.777732 TGTGCCCCTTGTTTGAGTAAATAAT 59.222 36.000 0.00 0.00 0.00 1.28
2336 4807 5.141182 TGTGCCCCTTGTTTGAGTAAATAA 58.859 37.500 0.00 0.00 0.00 1.40
2337 4808 4.730966 TGTGCCCCTTGTTTGAGTAAATA 58.269 39.130 0.00 0.00 0.00 1.40
2338 4809 3.571590 TGTGCCCCTTGTTTGAGTAAAT 58.428 40.909 0.00 0.00 0.00 1.40
2339 4810 2.955660 CTGTGCCCCTTGTTTGAGTAAA 59.044 45.455 0.00 0.00 0.00 2.01
2340 4811 2.582052 CTGTGCCCCTTGTTTGAGTAA 58.418 47.619 0.00 0.00 0.00 2.24
2341 4812 1.202879 CCTGTGCCCCTTGTTTGAGTA 60.203 52.381 0.00 0.00 0.00 2.59
2342 4813 0.468029 CCTGTGCCCCTTGTTTGAGT 60.468 55.000 0.00 0.00 0.00 3.41
2343 4814 1.809567 GCCTGTGCCCCTTGTTTGAG 61.810 60.000 0.00 0.00 0.00 3.02
2344 4815 1.832167 GCCTGTGCCCCTTGTTTGA 60.832 57.895 0.00 0.00 0.00 2.69
2345 4816 1.684386 TTGCCTGTGCCCCTTGTTTG 61.684 55.000 0.00 0.00 36.33 2.93
2346 4817 1.382420 TTGCCTGTGCCCCTTGTTT 60.382 52.632 0.00 0.00 36.33 2.83
2347 4818 1.833934 CTTGCCTGTGCCCCTTGTT 60.834 57.895 0.00 0.00 36.33 2.83
2348 4819 2.203538 CTTGCCTGTGCCCCTTGT 60.204 61.111 0.00 0.00 36.33 3.16
2349 4820 2.993264 CCTTGCCTGTGCCCCTTG 60.993 66.667 0.00 0.00 36.33 3.61
2350 4821 3.511610 ACCTTGCCTGTGCCCCTT 61.512 61.111 0.00 0.00 36.33 3.95
2351 4822 3.971702 GACCTTGCCTGTGCCCCT 61.972 66.667 0.00 0.00 36.33 4.79
2352 4823 3.590466 ATGACCTTGCCTGTGCCCC 62.590 63.158 0.00 0.00 36.33 5.80
2353 4824 2.036256 ATGACCTTGCCTGTGCCC 59.964 61.111 0.00 0.00 36.33 5.36
2354 4825 2.048603 GGATGACCTTGCCTGTGCC 61.049 63.158 0.00 0.00 36.33 5.01
2355 4826 0.253044 TAGGATGACCTTGCCTGTGC 59.747 55.000 0.00 0.00 45.36 4.57
2356 4827 2.322355 CTAGGATGACCTTGCCTGTG 57.678 55.000 0.00 0.00 45.36 3.66
2362 4833 3.054802 AGAAAGTGGCTAGGATGACCTTG 60.055 47.826 0.00 0.00 45.36 3.61
2363 4834 3.185455 AGAAAGTGGCTAGGATGACCTT 58.815 45.455 0.00 0.00 45.36 3.50
2365 4836 2.769095 AGAGAAAGTGGCTAGGATGACC 59.231 50.000 0.00 0.00 0.00 4.02
2366 4837 4.187694 CAAGAGAAAGTGGCTAGGATGAC 58.812 47.826 0.00 0.00 0.00 3.06
2367 4838 3.369892 GCAAGAGAAAGTGGCTAGGATGA 60.370 47.826 0.00 0.00 0.00 2.92
2368 4839 2.941720 GCAAGAGAAAGTGGCTAGGATG 59.058 50.000 0.00 0.00 0.00 3.51
2369 4840 2.843113 AGCAAGAGAAAGTGGCTAGGAT 59.157 45.455 0.00 0.00 32.09 3.24
2370 4841 2.260822 AGCAAGAGAAAGTGGCTAGGA 58.739 47.619 0.00 0.00 32.09 2.94
2371 4842 2.777832 AGCAAGAGAAAGTGGCTAGG 57.222 50.000 0.00 0.00 32.09 3.02
2372 4843 4.083057 GGAAAAGCAAGAGAAAGTGGCTAG 60.083 45.833 0.00 0.00 33.80 3.42
2373 4844 3.821033 GGAAAAGCAAGAGAAAGTGGCTA 59.179 43.478 0.00 0.00 33.80 3.93
2374 4845 2.625314 GGAAAAGCAAGAGAAAGTGGCT 59.375 45.455 0.00 0.00 36.13 4.75
2375 4846 2.288457 GGGAAAAGCAAGAGAAAGTGGC 60.288 50.000 0.00 0.00 0.00 5.01
2376 4847 3.225940 AGGGAAAAGCAAGAGAAAGTGG 58.774 45.455 0.00 0.00 0.00 4.00
2377 4848 4.140536 AGAGGGAAAAGCAAGAGAAAGTG 58.859 43.478 0.00 0.00 0.00 3.16
2378 4849 4.445557 AGAGGGAAAAGCAAGAGAAAGT 57.554 40.909 0.00 0.00 0.00 2.66
2379 4850 5.534278 AGAAAGAGGGAAAAGCAAGAGAAAG 59.466 40.000 0.00 0.00 0.00 2.62
2380 4851 5.449553 AGAAAGAGGGAAAAGCAAGAGAAA 58.550 37.500 0.00 0.00 0.00 2.52
2381 4852 5.053978 AGAAAGAGGGAAAAGCAAGAGAA 57.946 39.130 0.00 0.00 0.00 2.87
2382 4853 4.349342 AGAGAAAGAGGGAAAAGCAAGAGA 59.651 41.667 0.00 0.00 0.00 3.10
2383 4854 4.650734 AGAGAAAGAGGGAAAAGCAAGAG 58.349 43.478 0.00 0.00 0.00 2.85
2384 4855 4.646572 GAGAGAAAGAGGGAAAAGCAAGA 58.353 43.478 0.00 0.00 0.00 3.02
2385 4856 3.434984 CGAGAGAAAGAGGGAAAAGCAAG 59.565 47.826 0.00 0.00 0.00 4.01
2386 4857 3.403038 CGAGAGAAAGAGGGAAAAGCAA 58.597 45.455 0.00 0.00 0.00 3.91
2387 4858 2.872038 GCGAGAGAAAGAGGGAAAAGCA 60.872 50.000 0.00 0.00 0.00 3.91
2388 4859 1.735018 GCGAGAGAAAGAGGGAAAAGC 59.265 52.381 0.00 0.00 0.00 3.51
2389 4860 3.326836 AGCGAGAGAAAGAGGGAAAAG 57.673 47.619 0.00 0.00 0.00 2.27
2390 4861 3.771577 AAGCGAGAGAAAGAGGGAAAA 57.228 42.857 0.00 0.00 0.00 2.29
2391 4862 3.771577 AAAGCGAGAGAAAGAGGGAAA 57.228 42.857 0.00 0.00 0.00 3.13
2392 4863 3.181454 ACAAAAGCGAGAGAAAGAGGGAA 60.181 43.478 0.00 0.00 0.00 3.97
2393 4864 2.368875 ACAAAAGCGAGAGAAAGAGGGA 59.631 45.455 0.00 0.00 0.00 4.20
2394 4865 2.739379 GACAAAAGCGAGAGAAAGAGGG 59.261 50.000 0.00 0.00 0.00 4.30
2395 4866 3.393800 TGACAAAAGCGAGAGAAAGAGG 58.606 45.455 0.00 0.00 0.00 3.69
2396 4867 3.120718 GCTGACAAAAGCGAGAGAAAGAG 60.121 47.826 0.00 0.00 32.56 2.85
2397 4868 2.802816 GCTGACAAAAGCGAGAGAAAGA 59.197 45.455 0.00 0.00 32.56 2.52
2398 4869 2.096019 GGCTGACAAAAGCGAGAGAAAG 60.096 50.000 0.00 0.00 44.52 2.62
2399 4870 1.873591 GGCTGACAAAAGCGAGAGAAA 59.126 47.619 0.00 0.00 44.52 2.52
2400 4871 1.202639 TGGCTGACAAAAGCGAGAGAA 60.203 47.619 0.00 0.00 44.52 2.87
2401 4872 0.392706 TGGCTGACAAAAGCGAGAGA 59.607 50.000 0.00 0.00 44.52 3.10
2402 4873 1.196354 CTTGGCTGACAAAAGCGAGAG 59.804 52.381 0.00 0.00 44.52 3.20
2403 4874 1.202639 TCTTGGCTGACAAAAGCGAGA 60.203 47.619 0.00 0.00 44.52 4.04
2404 4875 1.196354 CTCTTGGCTGACAAAAGCGAG 59.804 52.381 0.00 0.00 44.52 5.03
2405 4876 1.202639 TCTCTTGGCTGACAAAAGCGA 60.203 47.619 0.00 0.00 44.52 4.93
2406 4877 1.069636 GTCTCTTGGCTGACAAAAGCG 60.070 52.381 0.00 0.00 44.52 4.68
2407 4878 1.069636 CGTCTCTTGGCTGACAAAAGC 60.070 52.381 0.00 0.00 42.75 3.51
2408 4879 1.532868 CCGTCTCTTGGCTGACAAAAG 59.467 52.381 0.00 0.00 38.91 2.27
2409 4880 1.593196 CCGTCTCTTGGCTGACAAAA 58.407 50.000 0.00 0.00 38.91 2.44
2410 4881 0.250295 CCCGTCTCTTGGCTGACAAA 60.250 55.000 0.00 0.00 38.91 2.83
2411 4882 1.371183 CCCGTCTCTTGGCTGACAA 59.629 57.895 0.00 0.00 37.55 3.18
2412 4883 1.407656 AACCCGTCTCTTGGCTGACA 61.408 55.000 0.00 0.00 33.18 3.58
2413 4884 0.670854 GAACCCGTCTCTTGGCTGAC 60.671 60.000 0.00 0.00 0.00 3.51
2414 4885 0.832135 AGAACCCGTCTCTTGGCTGA 60.832 55.000 0.00 0.00 0.00 4.26
2415 4886 0.035458 AAGAACCCGTCTCTTGGCTG 59.965 55.000 0.00 0.00 34.56 4.85
2416 4887 0.321996 GAAGAACCCGTCTCTTGGCT 59.678 55.000 0.00 0.00 34.56 4.75
2417 4888 0.321996 AGAAGAACCCGTCTCTTGGC 59.678 55.000 0.00 0.00 34.56 4.52
2418 4889 1.941668 GCAGAAGAACCCGTCTCTTGG 60.942 57.143 0.00 0.00 34.56 3.61
2419 4890 1.270305 TGCAGAAGAACCCGTCTCTTG 60.270 52.381 0.00 0.00 34.56 3.02
2420 4891 1.001406 CTGCAGAAGAACCCGTCTCTT 59.999 52.381 8.42 0.00 34.56 2.85
2421 4892 0.605589 CTGCAGAAGAACCCGTCTCT 59.394 55.000 8.42 0.00 34.56 3.10
2422 4893 0.603569 TCTGCAGAAGAACCCGTCTC 59.396 55.000 15.67 0.00 34.56 3.36
2423 4894 1.048601 TTCTGCAGAAGAACCCGTCT 58.951 50.000 25.16 0.00 40.09 4.18
2424 4895 3.606886 TTCTGCAGAAGAACCCGTC 57.393 52.632 25.16 0.00 40.09 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.