Multiple sequence alignment - TraesCS5B01G473100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G473100 | chr5B | 100.000 | 2545 | 0 | 0 | 1 | 2545 | 647388319 | 647385775 | 0.000000e+00 | 4700.0 |
1 | TraesCS5B01G473100 | chr5B | 83.333 | 162 | 21 | 6 | 28 | 185 | 621396673 | 621396514 | 7.340000e-31 | 145.0 |
2 | TraesCS5B01G473100 | chr5D | 94.407 | 1198 | 40 | 10 | 696 | 1889 | 514924388 | 514923214 | 0.000000e+00 | 1816.0 |
3 | TraesCS5B01G473100 | chr5D | 97.238 | 362 | 8 | 2 | 1889 | 2248 | 514923169 | 514922808 | 1.670000e-171 | 612.0 |
4 | TraesCS5B01G473100 | chr5D | 81.408 | 355 | 42 | 10 | 206 | 546 | 514924715 | 514924371 | 4.170000e-68 | 268.0 |
5 | TraesCS5B01G473100 | chr5D | 84.375 | 160 | 19 | 3 | 29 | 182 | 563965180 | 563965339 | 4.390000e-33 | 152.0 |
6 | TraesCS5B01G473100 | chr5D | 95.522 | 67 | 3 | 0 | 2479 | 2545 | 514922813 | 514922747 | 9.630000e-20 | 108.0 |
7 | TraesCS5B01G473100 | chr5A | 89.974 | 1137 | 79 | 19 | 696 | 1818 | 642919676 | 642918561 | 0.000000e+00 | 1435.0 |
8 | TraesCS5B01G473100 | chr5A | 100.000 | 30 | 0 | 0 | 1 | 30 | 642920062 | 642920033 | 3.540000e-04 | 56.5 |
9 | TraesCS5B01G473100 | chr6D | 89.267 | 764 | 60 | 15 | 808 | 1560 | 16307432 | 16306680 | 0.000000e+00 | 937.0 |
10 | TraesCS5B01G473100 | chr6D | 86.337 | 849 | 77 | 22 | 733 | 1560 | 16523452 | 16522622 | 0.000000e+00 | 889.0 |
11 | TraesCS5B01G473100 | chr6D | 83.762 | 973 | 100 | 37 | 735 | 1685 | 16529769 | 16528833 | 0.000000e+00 | 869.0 |
12 | TraesCS5B01G473100 | chr6D | 85.497 | 855 | 85 | 22 | 723 | 1562 | 16510497 | 16511327 | 0.000000e+00 | 856.0 |
13 | TraesCS5B01G473100 | chr6D | 85.935 | 711 | 70 | 18 | 853 | 1545 | 24001426 | 24002124 | 0.000000e+00 | 732.0 |
14 | TraesCS5B01G473100 | chr6D | 87.795 | 254 | 25 | 5 | 2233 | 2482 | 81014670 | 81014419 | 2.480000e-75 | 292.0 |
15 | TraesCS5B01G473100 | chr6D | 88.477 | 243 | 27 | 1 | 2244 | 2485 | 446210180 | 446210422 | 2.480000e-75 | 292.0 |
16 | TraesCS5B01G473100 | chr6B | 87.013 | 847 | 72 | 24 | 733 | 1560 | 28980500 | 28979673 | 0.000000e+00 | 920.0 |
17 | TraesCS5B01G473100 | chr6B | 87.223 | 767 | 62 | 25 | 808 | 1562 | 28256814 | 28256072 | 0.000000e+00 | 841.0 |
18 | TraesCS5B01G473100 | chr6B | 92.523 | 107 | 8 | 0 | 77 | 183 | 314646968 | 314647074 | 1.220000e-33 | 154.0 |
19 | TraesCS5B01G473100 | chr6B | 89.744 | 117 | 10 | 2 | 76 | 190 | 561149924 | 561149808 | 5.670000e-32 | 148.0 |
20 | TraesCS5B01G473100 | chr1B | 83.976 | 1011 | 95 | 39 | 733 | 1717 | 587472620 | 587473589 | 0.000000e+00 | 907.0 |
21 | TraesCS5B01G473100 | chr6A | 88.062 | 779 | 54 | 25 | 802 | 1562 | 16593984 | 16593227 | 0.000000e+00 | 887.0 |
22 | TraesCS5B01G473100 | chr3D | 89.627 | 241 | 24 | 1 | 2244 | 2483 | 304534561 | 304534801 | 3.180000e-79 | 305.0 |
23 | TraesCS5B01G473100 | chr3D | 88.142 | 253 | 28 | 2 | 2236 | 2487 | 439774393 | 439774644 | 1.480000e-77 | 300.0 |
24 | TraesCS5B01G473100 | chr3D | 88.306 | 248 | 28 | 1 | 2235 | 2481 | 209677479 | 209677726 | 1.910000e-76 | 296.0 |
25 | TraesCS5B01G473100 | chr3D | 88.259 | 247 | 26 | 3 | 2244 | 2488 | 602938487 | 602938242 | 2.480000e-75 | 292.0 |
26 | TraesCS5B01G473100 | chr3D | 92.920 | 113 | 7 | 1 | 77 | 188 | 125786849 | 125786961 | 2.030000e-36 | 163.0 |
27 | TraesCS5B01G473100 | chr3D | 92.035 | 113 | 8 | 1 | 77 | 188 | 125779342 | 125779454 | 9.430000e-35 | 158.0 |
28 | TraesCS5B01G473100 | chr7D | 89.583 | 240 | 24 | 1 | 2243 | 2481 | 195476255 | 195476494 | 1.140000e-78 | 303.0 |
29 | TraesCS5B01G473100 | chr7D | 82.468 | 154 | 24 | 3 | 29 | 182 | 556720332 | 556720482 | 5.710000e-27 | 132.0 |
30 | TraesCS5B01G473100 | chr2A | 89.121 | 239 | 22 | 4 | 2244 | 2481 | 9107187 | 9106952 | 6.890000e-76 | 294.0 |
31 | TraesCS5B01G473100 | chr4B | 88.477 | 243 | 26 | 2 | 2241 | 2482 | 468241494 | 468241253 | 2.480000e-75 | 292.0 |
32 | TraesCS5B01G473100 | chr3A | 84.568 | 162 | 18 | 4 | 29 | 183 | 130848281 | 130848120 | 1.220000e-33 | 154.0 |
33 | TraesCS5B01G473100 | chr2D | 83.439 | 157 | 24 | 2 | 28 | 184 | 616431600 | 616431446 | 7.340000e-31 | 145.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G473100 | chr5B | 647385775 | 647388319 | 2544 | True | 4700.00 | 4700 | 100.00000 | 1 | 2545 | 1 | chr5B.!!$R2 | 2544 |
1 | TraesCS5B01G473100 | chr5D | 514922747 | 514924715 | 1968 | True | 701.00 | 1816 | 92.14375 | 206 | 2545 | 4 | chr5D.!!$R1 | 2339 |
2 | TraesCS5B01G473100 | chr5A | 642918561 | 642920062 | 1501 | True | 745.75 | 1435 | 94.98700 | 1 | 1818 | 2 | chr5A.!!$R1 | 1817 |
3 | TraesCS5B01G473100 | chr6D | 16306680 | 16307432 | 752 | True | 937.00 | 937 | 89.26700 | 808 | 1560 | 1 | chr6D.!!$R1 | 752 |
4 | TraesCS5B01G473100 | chr6D | 16522622 | 16523452 | 830 | True | 889.00 | 889 | 86.33700 | 733 | 1560 | 1 | chr6D.!!$R2 | 827 |
5 | TraesCS5B01G473100 | chr6D | 16528833 | 16529769 | 936 | True | 869.00 | 869 | 83.76200 | 735 | 1685 | 1 | chr6D.!!$R3 | 950 |
6 | TraesCS5B01G473100 | chr6D | 16510497 | 16511327 | 830 | False | 856.00 | 856 | 85.49700 | 723 | 1562 | 1 | chr6D.!!$F1 | 839 |
7 | TraesCS5B01G473100 | chr6D | 24001426 | 24002124 | 698 | False | 732.00 | 732 | 85.93500 | 853 | 1545 | 1 | chr6D.!!$F2 | 692 |
8 | TraesCS5B01G473100 | chr6B | 28979673 | 28980500 | 827 | True | 920.00 | 920 | 87.01300 | 733 | 1560 | 1 | chr6B.!!$R2 | 827 |
9 | TraesCS5B01G473100 | chr6B | 28256072 | 28256814 | 742 | True | 841.00 | 841 | 87.22300 | 808 | 1562 | 1 | chr6B.!!$R1 | 754 |
10 | TraesCS5B01G473100 | chr1B | 587472620 | 587473589 | 969 | False | 907.00 | 907 | 83.97600 | 733 | 1717 | 1 | chr1B.!!$F1 | 984 |
11 | TraesCS5B01G473100 | chr6A | 16593227 | 16593984 | 757 | True | 887.00 | 887 | 88.06200 | 802 | 1562 | 1 | chr6A.!!$R1 | 760 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
661 | 678 | 0.038599 | ATGGGCTGTCAGCAACATCA | 59.961 | 50.0 | 25.68 | 14.79 | 44.75 | 3.07 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1602 | 1704 | 0.693622 | TACAAGACCCAATCCCGCAA | 59.306 | 50.0 | 0.0 | 0.0 | 0.0 | 4.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
30 | 31 | 6.263168 | AGCAAGTAAAATATGCTCCCATGTAC | 59.737 | 38.462 | 0.00 | 0.00 | 46.98 | 2.90 |
31 | 32 | 6.263168 | GCAAGTAAAATATGCTCCCATGTACT | 59.737 | 38.462 | 0.00 | 0.00 | 37.12 | 2.73 |
32 | 33 | 7.520614 | GCAAGTAAAATATGCTCCCATGTACTC | 60.521 | 40.741 | 0.00 | 0.00 | 37.12 | 2.59 |
33 | 34 | 6.534634 | AGTAAAATATGCTCCCATGTACTCC | 58.465 | 40.000 | 0.00 | 0.00 | 32.85 | 3.85 |
34 | 35 | 5.653255 | AAAATATGCTCCCATGTACTCCT | 57.347 | 39.130 | 0.00 | 0.00 | 32.85 | 3.69 |
35 | 36 | 5.653255 | AAATATGCTCCCATGTACTCCTT | 57.347 | 39.130 | 0.00 | 0.00 | 32.85 | 3.36 |
36 | 37 | 4.899352 | ATATGCTCCCATGTACTCCTTC | 57.101 | 45.455 | 0.00 | 0.00 | 32.85 | 3.46 |
37 | 38 | 1.204146 | TGCTCCCATGTACTCCTTCC | 58.796 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
38 | 39 | 0.105039 | GCTCCCATGTACTCCTTCCG | 59.895 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
39 | 40 | 1.486211 | CTCCCATGTACTCCTTCCGT | 58.514 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
40 | 41 | 1.831736 | CTCCCATGTACTCCTTCCGTT | 59.168 | 52.381 | 0.00 | 0.00 | 0.00 | 4.44 |
41 | 42 | 1.829222 | TCCCATGTACTCCTTCCGTTC | 59.171 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
42 | 43 | 1.831736 | CCCATGTACTCCTTCCGTTCT | 59.168 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
43 | 44 | 2.236395 | CCCATGTACTCCTTCCGTTCTT | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
44 | 45 | 3.449737 | CCCATGTACTCCTTCCGTTCTTA | 59.550 | 47.826 | 0.00 | 0.00 | 0.00 | 2.10 |
45 | 46 | 4.081309 | CCCATGTACTCCTTCCGTTCTTAA | 60.081 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
46 | 47 | 5.484715 | CCATGTACTCCTTCCGTTCTTAAA | 58.515 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
47 | 48 | 6.113411 | CCATGTACTCCTTCCGTTCTTAAAT | 58.887 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
48 | 49 | 7.270047 | CCATGTACTCCTTCCGTTCTTAAATA | 58.730 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
49 | 50 | 7.931948 | CCATGTACTCCTTCCGTTCTTAAATAT | 59.068 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
50 | 51 | 9.326413 | CATGTACTCCTTCCGTTCTTAAATATT | 57.674 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
51 | 52 | 9.901172 | ATGTACTCCTTCCGTTCTTAAATATTT | 57.099 | 29.630 | 5.89 | 5.89 | 0.00 | 1.40 |
52 | 53 | 9.158233 | TGTACTCCTTCCGTTCTTAAATATTTG | 57.842 | 33.333 | 11.05 | 0.00 | 0.00 | 2.32 |
53 | 54 | 9.159364 | GTACTCCTTCCGTTCTTAAATATTTGT | 57.841 | 33.333 | 11.05 | 0.00 | 0.00 | 2.83 |
54 | 55 | 8.631480 | ACTCCTTCCGTTCTTAAATATTTGTT | 57.369 | 30.769 | 11.05 | 0.00 | 0.00 | 2.83 |
55 | 56 | 9.074576 | ACTCCTTCCGTTCTTAAATATTTGTTT | 57.925 | 29.630 | 11.05 | 0.00 | 0.00 | 2.83 |
56 | 57 | 9.908152 | CTCCTTCCGTTCTTAAATATTTGTTTT | 57.092 | 29.630 | 11.05 | 0.00 | 0.00 | 2.43 |
90 | 91 | 9.932207 | ATTTCAATAAATGAGCAAAATGAGTGA | 57.068 | 25.926 | 0.00 | 0.00 | 39.77 | 3.41 |
91 | 92 | 9.761504 | TTTCAATAAATGAGCAAAATGAGTGAA | 57.238 | 25.926 | 0.00 | 0.00 | 39.77 | 3.18 |
92 | 93 | 9.932207 | TTCAATAAATGAGCAAAATGAGTGAAT | 57.068 | 25.926 | 0.00 | 0.00 | 39.77 | 2.57 |
93 | 94 | 9.932207 | TCAATAAATGAGCAAAATGAGTGAATT | 57.068 | 25.926 | 0.00 | 0.00 | 33.04 | 2.17 |
98 | 99 | 8.524870 | AATGAGCAAAATGAGTGAATTTACAC | 57.475 | 30.769 | 2.93 | 0.00 | 40.60 | 2.90 |
137 | 138 | 6.267496 | CATACATCCGTATGTGATAGTCCA | 57.733 | 41.667 | 3.56 | 0.00 | 46.70 | 4.02 |
138 | 139 | 6.867550 | CATACATCCGTATGTGATAGTCCAT | 58.132 | 40.000 | 3.56 | 0.00 | 46.70 | 3.41 |
139 | 140 | 5.808366 | ACATCCGTATGTGATAGTCCATT | 57.192 | 39.130 | 0.00 | 0.00 | 44.79 | 3.16 |
140 | 141 | 6.174720 | ACATCCGTATGTGATAGTCCATTT | 57.825 | 37.500 | 0.00 | 0.00 | 44.79 | 2.32 |
141 | 142 | 5.991606 | ACATCCGTATGTGATAGTCCATTTG | 59.008 | 40.000 | 0.00 | 0.00 | 44.79 | 2.32 |
142 | 143 | 5.862678 | TCCGTATGTGATAGTCCATTTGA | 57.137 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
143 | 144 | 6.228616 | TCCGTATGTGATAGTCCATTTGAA | 57.771 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
144 | 145 | 6.645306 | TCCGTATGTGATAGTCCATTTGAAA | 58.355 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
145 | 146 | 7.279615 | TCCGTATGTGATAGTCCATTTGAAAT | 58.720 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
146 | 147 | 7.773224 | TCCGTATGTGATAGTCCATTTGAAATT | 59.227 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
147 | 148 | 8.405531 | CCGTATGTGATAGTCCATTTGAAATTT | 58.594 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
148 | 149 | 9.787532 | CGTATGTGATAGTCCATTTGAAATTTT | 57.212 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
192 | 193 | 3.195825 | ACAGAGGGAGTATTTTCTGGACG | 59.804 | 47.826 | 5.47 | 0.00 | 40.97 | 4.79 |
193 | 194 | 3.195825 | CAGAGGGAGTATTTTCTGGACGT | 59.804 | 47.826 | 0.00 | 0.00 | 34.76 | 4.34 |
195 | 196 | 5.021458 | AGAGGGAGTATTTTCTGGACGTAA | 58.979 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
197 | 198 | 5.485620 | AGGGAGTATTTTCTGGACGTAAAC | 58.514 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
201 | 202 | 7.255208 | GGGAGTATTTTCTGGACGTAAACAAAA | 60.255 | 37.037 | 0.00 | 0.00 | 0.00 | 2.44 |
204 | 205 | 8.680001 | AGTATTTTCTGGACGTAAACAAAACTT | 58.320 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
229 | 230 | 0.462375 | TGCTCCGCCACGTATTATGT | 59.538 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
298 | 300 | 2.769663 | TGTGTCTTGGTAGTGTTGGACT | 59.230 | 45.455 | 0.00 | 0.00 | 38.88 | 3.85 |
299 | 301 | 3.131396 | GTGTCTTGGTAGTGTTGGACTG | 58.869 | 50.000 | 0.00 | 0.00 | 35.96 | 3.51 |
301 | 303 | 1.765904 | TCTTGGTAGTGTTGGACTGCA | 59.234 | 47.619 | 0.00 | 0.00 | 38.98 | 4.41 |
302 | 304 | 2.146342 | CTTGGTAGTGTTGGACTGCAG | 58.854 | 52.381 | 13.48 | 13.48 | 38.98 | 4.41 |
303 | 305 | 1.419381 | TGGTAGTGTTGGACTGCAGA | 58.581 | 50.000 | 23.35 | 0.00 | 38.98 | 4.26 |
304 | 306 | 1.765904 | TGGTAGTGTTGGACTGCAGAA | 59.234 | 47.619 | 23.35 | 0.48 | 38.98 | 3.02 |
312 | 328 | 2.618241 | GTTGGACTGCAGAATTGTGTCA | 59.382 | 45.455 | 23.35 | 3.59 | 34.18 | 3.58 |
315 | 331 | 3.890756 | TGGACTGCAGAATTGTGTCATTT | 59.109 | 39.130 | 23.35 | 0.00 | 34.18 | 2.32 |
318 | 334 | 5.336213 | GGACTGCAGAATTGTGTCATTTGAT | 60.336 | 40.000 | 23.35 | 0.00 | 34.18 | 2.57 |
321 | 337 | 5.953183 | TGCAGAATTGTGTCATTTGATACC | 58.047 | 37.500 | 4.33 | 0.00 | 35.62 | 2.73 |
346 | 362 | 7.872993 | CCGATGTACTTTATCATCCACTTATGT | 59.127 | 37.037 | 0.00 | 0.00 | 37.67 | 2.29 |
416 | 432 | 9.632807 | TTTTAACAATTTGCATAAGTAGCGATT | 57.367 | 25.926 | 0.00 | 0.00 | 33.85 | 3.34 |
448 | 464 | 5.793030 | ATTTTATTGTGTTTGGGGAACGA | 57.207 | 34.783 | 0.00 | 0.00 | 41.29 | 3.85 |
452 | 468 | 0.256464 | TGTGTTTGGGGAACGAAGGT | 59.744 | 50.000 | 0.00 | 0.00 | 41.29 | 3.50 |
454 | 470 | 2.092538 | TGTGTTTGGGGAACGAAGGTAA | 60.093 | 45.455 | 0.00 | 0.00 | 41.29 | 2.85 |
465 | 481 | 6.293698 | GGGAACGAAGGTAATGTATAACCAT | 58.706 | 40.000 | 0.00 | 0.00 | 38.30 | 3.55 |
495 | 511 | 7.015487 | TCTCCAAGTGAAAAATTGATTGGATGT | 59.985 | 33.333 | 5.03 | 0.00 | 43.73 | 3.06 |
537 | 554 | 7.997107 | AAAATATCATGTACAAATGCTGCAG | 57.003 | 32.000 | 10.11 | 10.11 | 0.00 | 4.41 |
538 | 555 | 6.947644 | AATATCATGTACAAATGCTGCAGA | 57.052 | 33.333 | 20.43 | 2.70 | 0.00 | 4.26 |
539 | 556 | 4.895224 | ATCATGTACAAATGCTGCAGAG | 57.105 | 40.909 | 20.43 | 3.40 | 0.00 | 3.35 |
540 | 557 | 3.941573 | TCATGTACAAATGCTGCAGAGA | 58.058 | 40.909 | 20.43 | 2.51 | 0.00 | 3.10 |
541 | 558 | 3.937079 | TCATGTACAAATGCTGCAGAGAG | 59.063 | 43.478 | 20.43 | 4.17 | 0.00 | 3.20 |
542 | 559 | 3.683365 | TGTACAAATGCTGCAGAGAGA | 57.317 | 42.857 | 20.43 | 0.00 | 0.00 | 3.10 |
543 | 560 | 3.593096 | TGTACAAATGCTGCAGAGAGAG | 58.407 | 45.455 | 20.43 | 6.12 | 0.00 | 3.20 |
544 | 561 | 3.259123 | TGTACAAATGCTGCAGAGAGAGA | 59.741 | 43.478 | 20.43 | 0.00 | 0.00 | 3.10 |
545 | 562 | 3.413846 | ACAAATGCTGCAGAGAGAGAA | 57.586 | 42.857 | 20.43 | 0.00 | 0.00 | 2.87 |
546 | 563 | 3.748083 | ACAAATGCTGCAGAGAGAGAAA | 58.252 | 40.909 | 20.43 | 0.00 | 0.00 | 2.52 |
547 | 564 | 4.139786 | ACAAATGCTGCAGAGAGAGAAAA | 58.860 | 39.130 | 20.43 | 0.00 | 0.00 | 2.29 |
548 | 565 | 4.581824 | ACAAATGCTGCAGAGAGAGAAAAA | 59.418 | 37.500 | 20.43 | 0.00 | 0.00 | 1.94 |
567 | 584 | 3.924114 | AAAAAGAAACCAACCCAAGGG | 57.076 | 42.857 | 2.91 | 2.91 | 42.03 | 3.95 |
568 | 585 | 1.128200 | AAAGAAACCAACCCAAGGGC | 58.872 | 50.000 | 4.70 | 0.00 | 39.32 | 5.19 |
569 | 586 | 0.264657 | AAGAAACCAACCCAAGGGCT | 59.735 | 50.000 | 4.70 | 0.00 | 39.32 | 5.19 |
570 | 587 | 1.154430 | AGAAACCAACCCAAGGGCTA | 58.846 | 50.000 | 4.70 | 0.00 | 39.32 | 3.93 |
571 | 588 | 1.501604 | AGAAACCAACCCAAGGGCTAA | 59.498 | 47.619 | 4.70 | 0.00 | 39.32 | 3.09 |
572 | 589 | 2.111792 | AGAAACCAACCCAAGGGCTAAT | 59.888 | 45.455 | 4.70 | 0.00 | 39.32 | 1.73 |
573 | 590 | 2.231716 | AACCAACCCAAGGGCTAATC | 57.768 | 50.000 | 4.70 | 0.00 | 39.32 | 1.75 |
574 | 591 | 0.335019 | ACCAACCCAAGGGCTAATCC | 59.665 | 55.000 | 4.70 | 0.00 | 39.32 | 3.01 |
575 | 592 | 0.631212 | CCAACCCAAGGGCTAATCCT | 59.369 | 55.000 | 4.70 | 0.00 | 39.32 | 3.24 |
576 | 593 | 1.410224 | CCAACCCAAGGGCTAATCCTC | 60.410 | 57.143 | 4.70 | 0.00 | 39.32 | 3.71 |
577 | 594 | 0.546598 | AACCCAAGGGCTAATCCTCG | 59.453 | 55.000 | 4.70 | 0.00 | 39.32 | 4.63 |
578 | 595 | 0.620700 | ACCCAAGGGCTAATCCTCGT | 60.621 | 55.000 | 4.70 | 0.00 | 39.32 | 4.18 |
579 | 596 | 0.546598 | CCCAAGGGCTAATCCTCGTT | 59.453 | 55.000 | 0.00 | 0.00 | 35.80 | 3.85 |
580 | 597 | 1.668419 | CCAAGGGCTAATCCTCGTTG | 58.332 | 55.000 | 0.00 | 0.00 | 35.80 | 4.10 |
581 | 598 | 1.668419 | CAAGGGCTAATCCTCGTTGG | 58.332 | 55.000 | 0.00 | 0.00 | 35.80 | 3.77 |
582 | 599 | 0.546598 | AAGGGCTAATCCTCGTTGGG | 59.453 | 55.000 | 0.00 | 0.00 | 35.80 | 4.12 |
583 | 600 | 0.326238 | AGGGCTAATCCTCGTTGGGA | 60.326 | 55.000 | 0.00 | 0.00 | 39.95 | 4.37 |
584 | 601 | 0.765510 | GGGCTAATCCTCGTTGGGAT | 59.234 | 55.000 | 0.00 | 0.00 | 46.96 | 3.85 |
597 | 614 | 9.726438 | ATCCTCGTTGGGATTTATTTATAGAAG | 57.274 | 33.333 | 0.00 | 0.00 | 42.89 | 2.85 |
598 | 615 | 8.930527 | TCCTCGTTGGGATTTATTTATAGAAGA | 58.069 | 33.333 | 0.00 | 0.00 | 36.20 | 2.87 |
599 | 616 | 9.555727 | CCTCGTTGGGATTTATTTATAGAAGAA | 57.444 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
612 | 629 | 8.859517 | ATTTATAGAAGAAACTCTACGAGCAC | 57.140 | 34.615 | 0.00 | 0.00 | 32.04 | 4.40 |
613 | 630 | 3.579335 | AGAAGAAACTCTACGAGCACC | 57.421 | 47.619 | 0.00 | 0.00 | 32.04 | 5.01 |
614 | 631 | 2.891580 | AGAAGAAACTCTACGAGCACCA | 59.108 | 45.455 | 0.00 | 0.00 | 32.04 | 4.17 |
615 | 632 | 2.726832 | AGAAACTCTACGAGCACCAC | 57.273 | 50.000 | 0.00 | 0.00 | 32.04 | 4.16 |
616 | 633 | 1.068472 | AGAAACTCTACGAGCACCACG | 60.068 | 52.381 | 0.00 | 0.00 | 32.04 | 4.94 |
617 | 634 | 0.666577 | AAACTCTACGAGCACCACGC | 60.667 | 55.000 | 0.00 | 0.00 | 42.91 | 5.34 |
626 | 643 | 2.713154 | GCACCACGCGTTCAAGTT | 59.287 | 55.556 | 10.22 | 0.00 | 0.00 | 2.66 |
627 | 644 | 1.654137 | GCACCACGCGTTCAAGTTG | 60.654 | 57.895 | 10.22 | 0.00 | 0.00 | 3.16 |
628 | 645 | 1.010125 | CACCACGCGTTCAAGTTGG | 60.010 | 57.895 | 10.22 | 8.84 | 0.00 | 3.77 |
629 | 646 | 2.184167 | ACCACGCGTTCAAGTTGGG | 61.184 | 57.895 | 10.22 | 7.88 | 0.00 | 4.12 |
630 | 647 | 1.890041 | CCACGCGTTCAAGTTGGGA | 60.890 | 57.895 | 10.22 | 0.00 | 0.00 | 4.37 |
631 | 648 | 1.278637 | CACGCGTTCAAGTTGGGAC | 59.721 | 57.895 | 10.22 | 1.88 | 0.00 | 4.46 |
632 | 649 | 1.145377 | ACGCGTTCAAGTTGGGACT | 59.855 | 52.632 | 5.58 | 0.00 | 37.87 | 3.85 |
633 | 650 | 0.463116 | ACGCGTTCAAGTTGGGACTT | 60.463 | 50.000 | 5.58 | 0.00 | 46.85 | 3.01 |
642 | 659 | 3.502123 | AAGTTGGGACTTGAATTCGGA | 57.498 | 42.857 | 0.04 | 0.00 | 44.27 | 4.55 |
643 | 660 | 3.721087 | AGTTGGGACTTGAATTCGGAT | 57.279 | 42.857 | 0.04 | 0.00 | 29.87 | 4.18 |
644 | 661 | 3.347216 | AGTTGGGACTTGAATTCGGATG | 58.653 | 45.455 | 0.04 | 0.00 | 29.87 | 3.51 |
645 | 662 | 2.418368 | TGGGACTTGAATTCGGATGG | 57.582 | 50.000 | 0.04 | 0.00 | 0.00 | 3.51 |
646 | 663 | 1.064758 | TGGGACTTGAATTCGGATGGG | 60.065 | 52.381 | 0.04 | 0.00 | 0.00 | 4.00 |
647 | 664 | 1.025041 | GGACTTGAATTCGGATGGGC | 58.975 | 55.000 | 0.04 | 0.00 | 0.00 | 5.36 |
648 | 665 | 1.408822 | GGACTTGAATTCGGATGGGCT | 60.409 | 52.381 | 0.04 | 0.00 | 0.00 | 5.19 |
649 | 666 | 1.672881 | GACTTGAATTCGGATGGGCTG | 59.327 | 52.381 | 0.04 | 0.00 | 0.00 | 4.85 |
650 | 667 | 1.004745 | ACTTGAATTCGGATGGGCTGT | 59.995 | 47.619 | 0.04 | 0.00 | 0.00 | 4.40 |
651 | 668 | 1.672881 | CTTGAATTCGGATGGGCTGTC | 59.327 | 52.381 | 0.04 | 0.00 | 0.00 | 3.51 |
652 | 669 | 0.617935 | TGAATTCGGATGGGCTGTCA | 59.382 | 50.000 | 0.04 | 0.00 | 0.00 | 3.58 |
653 | 670 | 1.303309 | GAATTCGGATGGGCTGTCAG | 58.697 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
654 | 671 | 0.749454 | AATTCGGATGGGCTGTCAGC | 60.749 | 55.000 | 16.93 | 16.93 | 41.46 | 4.26 |
655 | 672 | 1.913951 | ATTCGGATGGGCTGTCAGCA | 61.914 | 55.000 | 25.68 | 7.26 | 44.75 | 4.41 |
656 | 673 | 2.046023 | CGGATGGGCTGTCAGCAA | 60.046 | 61.111 | 25.68 | 13.95 | 44.75 | 3.91 |
657 | 674 | 2.401766 | CGGATGGGCTGTCAGCAAC | 61.402 | 63.158 | 25.68 | 17.72 | 44.75 | 4.17 |
658 | 675 | 1.303561 | GGATGGGCTGTCAGCAACA | 60.304 | 57.895 | 25.68 | 22.35 | 44.75 | 3.33 |
659 | 676 | 0.682209 | GGATGGGCTGTCAGCAACAT | 60.682 | 55.000 | 25.39 | 25.39 | 44.75 | 2.71 |
660 | 677 | 0.737219 | GATGGGCTGTCAGCAACATC | 59.263 | 55.000 | 29.85 | 29.85 | 44.75 | 3.06 |
661 | 678 | 0.038599 | ATGGGCTGTCAGCAACATCA | 59.961 | 50.000 | 25.68 | 14.79 | 44.75 | 3.07 |
662 | 679 | 0.607217 | TGGGCTGTCAGCAACATCAG | 60.607 | 55.000 | 25.68 | 0.00 | 44.75 | 2.90 |
664 | 681 | 2.552802 | GCTGTCAGCAACATCAGCT | 58.447 | 52.632 | 20.16 | 0.00 | 46.35 | 4.24 |
665 | 682 | 0.447011 | GCTGTCAGCAACATCAGCTC | 59.553 | 55.000 | 20.16 | 0.00 | 46.35 | 4.09 |
666 | 683 | 1.085091 | CTGTCAGCAACATCAGCTCC | 58.915 | 55.000 | 0.00 | 0.00 | 41.14 | 4.70 |
667 | 684 | 0.671472 | TGTCAGCAACATCAGCTCCG | 60.671 | 55.000 | 0.00 | 0.00 | 41.14 | 4.63 |
668 | 685 | 1.078918 | TCAGCAACATCAGCTCCGG | 60.079 | 57.895 | 0.00 | 0.00 | 41.14 | 5.14 |
669 | 686 | 1.078918 | CAGCAACATCAGCTCCGGA | 60.079 | 57.895 | 2.93 | 2.93 | 41.14 | 5.14 |
670 | 687 | 1.088340 | CAGCAACATCAGCTCCGGAG | 61.088 | 60.000 | 27.83 | 27.83 | 41.14 | 4.63 |
898 | 930 | 0.248215 | CCAATAAAAGCCGCGCTCTG | 60.248 | 55.000 | 5.56 | 0.00 | 38.25 | 3.35 |
920 | 953 | 0.591236 | CGCCGTCCAAACACACAAAG | 60.591 | 55.000 | 0.00 | 0.00 | 0.00 | 2.77 |
933 | 983 | 2.880268 | CACACAAAGTCAGAGCATTCCA | 59.120 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
934 | 984 | 3.316029 | CACACAAAGTCAGAGCATTCCAA | 59.684 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
935 | 985 | 3.953612 | ACACAAAGTCAGAGCATTCCAAA | 59.046 | 39.130 | 0.00 | 0.00 | 0.00 | 3.28 |
936 | 986 | 4.402155 | ACACAAAGTCAGAGCATTCCAAAA | 59.598 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
937 | 987 | 5.069516 | ACACAAAGTCAGAGCATTCCAAAAT | 59.930 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
938 | 988 | 5.632347 | CACAAAGTCAGAGCATTCCAAAATC | 59.368 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
939 | 989 | 5.166398 | CAAAGTCAGAGCATTCCAAAATCC | 58.834 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
1113 | 1174 | 3.659089 | GAAGAAGGGCCGCTACGCA | 62.659 | 63.158 | 0.00 | 0.00 | 0.00 | 5.24 |
1206 | 1269 | 0.546747 | ATCTTTCCTGTCCGTCCCCA | 60.547 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
1599 | 1701 | 7.095017 | GGAGAAGATGACGAGACTTTTGATTTT | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
1617 | 1719 | 3.448469 | TTTTTGCGGGATTGGGTCT | 57.552 | 47.368 | 0.00 | 0.00 | 0.00 | 3.85 |
1743 | 1852 | 3.603532 | TGCAATCATGTCCTCTTCTGAC | 58.396 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
1783 | 1893 | 3.748048 | TGCTTCAGAAAGTGTGCATCTAC | 59.252 | 43.478 | 0.00 | 0.00 | 33.87 | 2.59 |
1784 | 1894 | 3.126000 | GCTTCAGAAAGTGTGCATCTACC | 59.874 | 47.826 | 0.00 | 0.00 | 34.79 | 3.18 |
1814 | 1925 | 9.877178 | CTTGTACCTTCTGTCAGTTTATAAGAT | 57.123 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
1961 | 2118 | 0.401738 | TTTCCCCTCCAGCTGAGTTG | 59.598 | 55.000 | 17.39 | 0.00 | 39.65 | 3.16 |
1982 | 2139 | 6.268847 | AGTTGGTTGTAGATTATTTTGGCCAA | 59.731 | 34.615 | 16.05 | 16.05 | 0.00 | 4.52 |
2036 | 2194 | 2.540361 | GCCGGTGACATGTAGTACTACG | 60.540 | 54.545 | 24.36 | 15.31 | 38.85 | 3.51 |
2053 | 2211 | 7.710896 | AGTACTACGTACAACAAACTTCTTCT | 58.289 | 34.615 | 0.00 | 0.00 | 41.03 | 2.85 |
2144 | 2302 | 8.648693 | ACTATTGGACTGAACTACTAAAACAGT | 58.351 | 33.333 | 0.00 | 0.00 | 43.10 | 3.55 |
2202 | 2360 | 9.554724 | GTAACGCTCATCAATCAAAAATTAAGA | 57.445 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
2209 | 2367 | 9.087871 | TCATCAATCAAAAATTAAGACAAGGGA | 57.912 | 29.630 | 0.00 | 0.00 | 0.00 | 4.20 |
2259 | 2417 | 3.890527 | GGTACTACCTCGGTCCTGA | 57.109 | 57.895 | 0.00 | 0.00 | 34.73 | 3.86 |
2260 | 2418 | 2.361643 | GGTACTACCTCGGTCCTGAT | 57.638 | 55.000 | 0.00 | 0.00 | 34.73 | 2.90 |
2261 | 2419 | 2.664015 | GGTACTACCTCGGTCCTGATT | 58.336 | 52.381 | 0.00 | 0.00 | 34.73 | 2.57 |
2262 | 2420 | 3.029570 | GGTACTACCTCGGTCCTGATTT | 58.970 | 50.000 | 0.00 | 0.00 | 34.73 | 2.17 |
2263 | 2421 | 3.181478 | GGTACTACCTCGGTCCTGATTTG | 60.181 | 52.174 | 0.00 | 0.00 | 34.73 | 2.32 |
2264 | 2422 | 2.537143 | ACTACCTCGGTCCTGATTTGT | 58.463 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
2265 | 2423 | 2.904434 | ACTACCTCGGTCCTGATTTGTT | 59.096 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
2266 | 2424 | 2.185004 | ACCTCGGTCCTGATTTGTTG | 57.815 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2267 | 2425 | 1.271379 | ACCTCGGTCCTGATTTGTTGG | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
2268 | 2426 | 1.271379 | CCTCGGTCCTGATTTGTTGGT | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
2269 | 2427 | 2.076863 | CTCGGTCCTGATTTGTTGGTC | 58.923 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
2270 | 2428 | 1.165270 | CGGTCCTGATTTGTTGGTCC | 58.835 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2271 | 2429 | 1.545841 | GGTCCTGATTTGTTGGTCCC | 58.454 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2272 | 2430 | 1.075536 | GGTCCTGATTTGTTGGTCCCT | 59.924 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
2273 | 2431 | 2.307686 | GGTCCTGATTTGTTGGTCCCTA | 59.692 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2274 | 2432 | 3.053619 | GGTCCTGATTTGTTGGTCCCTAT | 60.054 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
2275 | 2433 | 4.569865 | GGTCCTGATTTGTTGGTCCCTATT | 60.570 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
2276 | 2434 | 5.339695 | GGTCCTGATTTGTTGGTCCCTATTA | 60.340 | 44.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2277 | 2435 | 6.365520 | GTCCTGATTTGTTGGTCCCTATTAT | 58.634 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2278 | 2436 | 7.420913 | GGTCCTGATTTGTTGGTCCCTATTATA | 60.421 | 40.741 | 0.00 | 0.00 | 0.00 | 0.98 |
2279 | 2437 | 7.996644 | GTCCTGATTTGTTGGTCCCTATTATAA | 59.003 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
2280 | 2438 | 8.732854 | TCCTGATTTGTTGGTCCCTATTATAAT | 58.267 | 33.333 | 2.97 | 2.97 | 0.00 | 1.28 |
2281 | 2439 | 9.014297 | CCTGATTTGTTGGTCCCTATTATAATC | 57.986 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
2282 | 2440 | 9.799106 | CTGATTTGTTGGTCCCTATTATAATCT | 57.201 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
2283 | 2441 | 9.573166 | TGATTTGTTGGTCCCTATTATAATCTG | 57.427 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2284 | 2442 | 9.574516 | GATTTGTTGGTCCCTATTATAATCTGT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2285 | 2443 | 8.746052 | TTTGTTGGTCCCTATTATAATCTGTG | 57.254 | 34.615 | 0.00 | 0.00 | 0.00 | 3.66 |
2286 | 2444 | 6.296026 | TGTTGGTCCCTATTATAATCTGTGC | 58.704 | 40.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2287 | 2445 | 5.499004 | TGGTCCCTATTATAATCTGTGCC | 57.501 | 43.478 | 0.00 | 1.89 | 0.00 | 5.01 |
2288 | 2446 | 4.910913 | TGGTCCCTATTATAATCTGTGCCA | 59.089 | 41.667 | 0.00 | 4.37 | 0.00 | 4.92 |
2289 | 2447 | 5.371176 | TGGTCCCTATTATAATCTGTGCCAA | 59.629 | 40.000 | 0.00 | 0.00 | 0.00 | 4.52 |
2290 | 2448 | 6.126332 | TGGTCCCTATTATAATCTGTGCCAAA | 60.126 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
2291 | 2449 | 6.206829 | GGTCCCTATTATAATCTGTGCCAAAC | 59.793 | 42.308 | 0.00 | 0.00 | 0.00 | 2.93 |
2292 | 2450 | 6.998673 | GTCCCTATTATAATCTGTGCCAAACT | 59.001 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
2293 | 2451 | 7.502561 | GTCCCTATTATAATCTGTGCCAAACTT | 59.497 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
2294 | 2452 | 8.058847 | TCCCTATTATAATCTGTGCCAAACTTT | 58.941 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
2295 | 2453 | 9.349713 | CCCTATTATAATCTGTGCCAAACTTTA | 57.650 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
2333 | 2491 | 9.740239 | ACTAATAAAATGTTCATGCATGTGATC | 57.260 | 29.630 | 25.43 | 14.33 | 0.00 | 2.92 |
2334 | 2492 | 9.961265 | CTAATAAAATGTTCATGCATGTGATCT | 57.039 | 29.630 | 25.43 | 7.01 | 0.00 | 2.75 |
2339 | 2497 | 9.661563 | AAAATGTTCATGCATGTGATCTAAAAT | 57.338 | 25.926 | 25.43 | 9.63 | 0.00 | 1.82 |
2340 | 2498 | 9.661563 | AAATGTTCATGCATGTGATCTAAAATT | 57.338 | 25.926 | 25.43 | 14.62 | 0.00 | 1.82 |
2376 | 2534 | 9.912634 | AACACTATGTTCAAATACAAATCCAAG | 57.087 | 29.630 | 0.00 | 0.00 | 35.27 | 3.61 |
2377 | 2535 | 8.522830 | ACACTATGTTCAAATACAAATCCAAGG | 58.477 | 33.333 | 0.00 | 0.00 | 0.00 | 3.61 |
2378 | 2536 | 8.739039 | CACTATGTTCAAATACAAATCCAAGGA | 58.261 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
2379 | 2537 | 9.479549 | ACTATGTTCAAATACAAATCCAAGGAT | 57.520 | 29.630 | 0.00 | 0.00 | 36.23 | 3.24 |
2395 | 2553 | 9.844257 | AATCCAAGGATTTAATTTTTGTTGACA | 57.156 | 25.926 | 8.51 | 0.00 | 41.55 | 3.58 |
2397 | 2555 | 9.270640 | TCCAAGGATTTAATTTTTGTTGACATG | 57.729 | 29.630 | 0.00 | 0.00 | 0.00 | 3.21 |
2398 | 2556 | 8.016801 | CCAAGGATTTAATTTTTGTTGACATGC | 58.983 | 33.333 | 0.00 | 0.00 | 0.00 | 4.06 |
2399 | 2557 | 8.557864 | CAAGGATTTAATTTTTGTTGACATGCA | 58.442 | 29.630 | 0.00 | 0.00 | 0.00 | 3.96 |
2400 | 2558 | 8.086851 | AGGATTTAATTTTTGTTGACATGCAC | 57.913 | 30.769 | 0.00 | 0.00 | 0.00 | 4.57 |
2401 | 2559 | 7.933033 | AGGATTTAATTTTTGTTGACATGCACT | 59.067 | 29.630 | 0.00 | 0.00 | 0.00 | 4.40 |
2402 | 2560 | 9.202273 | GGATTTAATTTTTGTTGACATGCACTA | 57.798 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
2405 | 2563 | 8.932945 | TTAATTTTTGTTGACATGCACTAACA | 57.067 | 26.923 | 0.00 | 0.00 | 0.00 | 2.41 |
2406 | 2564 | 9.539825 | TTAATTTTTGTTGACATGCACTAACAT | 57.460 | 25.926 | 0.00 | 0.00 | 33.56 | 2.71 |
2407 | 2565 | 8.436046 | AATTTTTGTTGACATGCACTAACATT | 57.564 | 26.923 | 0.00 | 0.00 | 33.56 | 2.71 |
2408 | 2566 | 7.840342 | TTTTTGTTGACATGCACTAACATTT | 57.160 | 28.000 | 0.00 | 0.00 | 33.56 | 2.32 |
2409 | 2567 | 7.840342 | TTTTGTTGACATGCACTAACATTTT | 57.160 | 28.000 | 0.00 | 0.00 | 33.56 | 1.82 |
2410 | 2568 | 8.932945 | TTTTGTTGACATGCACTAACATTTTA | 57.067 | 26.923 | 0.00 | 0.00 | 33.56 | 1.52 |
2411 | 2569 | 9.539825 | TTTTGTTGACATGCACTAACATTTTAT | 57.460 | 25.926 | 0.00 | 0.00 | 33.56 | 1.40 |
2412 | 2570 | 8.741101 | TTGTTGACATGCACTAACATTTTATC | 57.259 | 30.769 | 0.00 | 0.00 | 33.56 | 1.75 |
2413 | 2571 | 7.880105 | TGTTGACATGCACTAACATTTTATCA | 58.120 | 30.769 | 0.00 | 0.00 | 0.00 | 2.15 |
2414 | 2572 | 8.022550 | TGTTGACATGCACTAACATTTTATCAG | 58.977 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2415 | 2573 | 7.686438 | TGACATGCACTAACATTTTATCAGT | 57.314 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2416 | 2574 | 8.109705 | TGACATGCACTAACATTTTATCAGTT | 57.890 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
2417 | 2575 | 9.225436 | TGACATGCACTAACATTTTATCAGTTA | 57.775 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
2456 | 2614 | 9.884636 | AAATTTAGCATAAATTACAAAGGGGAC | 57.115 | 29.630 | 7.68 | 0.00 | 30.38 | 4.46 |
2458 | 2616 | 9.930158 | ATTTAGCATAAATTACAAAGGGGACTA | 57.070 | 29.630 | 0.00 | 0.00 | 42.68 | 2.59 |
2459 | 2617 | 9.756571 | TTTAGCATAAATTACAAAGGGGACTAA | 57.243 | 29.630 | 0.00 | 0.00 | 42.68 | 2.24 |
2460 | 2618 | 9.930158 | TTAGCATAAATTACAAAGGGGACTAAT | 57.070 | 29.630 | 0.00 | 0.00 | 42.68 | 1.73 |
2462 | 2620 | 9.930158 | AGCATAAATTACAAAGGGGACTAATAA | 57.070 | 29.630 | 0.00 | 0.00 | 42.68 | 1.40 |
2468 | 2626 | 9.916360 | AATTACAAAGGGGACTAATAAACTAGG | 57.084 | 33.333 | 0.00 | 0.00 | 42.68 | 3.02 |
2469 | 2627 | 8.683776 | TTACAAAGGGGACTAATAAACTAGGA | 57.316 | 34.615 | 0.00 | 0.00 | 42.68 | 2.94 |
2470 | 2628 | 6.955364 | ACAAAGGGGACTAATAAACTAGGAC | 58.045 | 40.000 | 0.00 | 0.00 | 42.68 | 3.85 |
2471 | 2629 | 5.866159 | AAGGGGACTAATAAACTAGGACG | 57.134 | 43.478 | 0.00 | 0.00 | 42.68 | 4.79 |
2472 | 2630 | 4.221530 | AGGGGACTAATAAACTAGGACGG | 58.778 | 47.826 | 0.00 | 0.00 | 40.61 | 4.79 |
2473 | 2631 | 4.078980 | AGGGGACTAATAAACTAGGACGGA | 60.079 | 45.833 | 0.00 | 0.00 | 40.61 | 4.69 |
2474 | 2632 | 4.280425 | GGGGACTAATAAACTAGGACGGAG | 59.720 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2475 | 2633 | 4.280425 | GGGACTAATAAACTAGGACGGAGG | 59.720 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2476 | 2634 | 4.892345 | GGACTAATAAACTAGGACGGAGGT | 59.108 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
2477 | 2635 | 6.064717 | GGACTAATAAACTAGGACGGAGGTA | 58.935 | 44.000 | 0.00 | 0.00 | 0.00 | 3.08 |
2478 | 2636 | 6.206438 | GGACTAATAAACTAGGACGGAGGTAG | 59.794 | 46.154 | 0.00 | 0.00 | 0.00 | 3.18 |
2493 | 2651 | 7.135591 | ACGGAGGTAGTACTAGTAGAAGAAT | 57.864 | 40.000 | 1.87 | 0.00 | 0.00 | 2.40 |
2494 | 2652 | 6.991531 | ACGGAGGTAGTACTAGTAGAAGAATG | 59.008 | 42.308 | 1.87 | 0.00 | 0.00 | 2.67 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
30 | 31 | 9.908152 | AAAACAAATATTTAAGAACGGAAGGAG | 57.092 | 29.630 | 0.00 | 0.00 | 0.00 | 3.69 |
64 | 65 | 9.932207 | TCACTCATTTTGCTCATTTATTGAAAT | 57.068 | 25.926 | 0.00 | 0.00 | 35.56 | 2.17 |
65 | 66 | 9.761504 | TTCACTCATTTTGCTCATTTATTGAAA | 57.238 | 25.926 | 0.00 | 0.00 | 32.78 | 2.69 |
66 | 67 | 9.932207 | ATTCACTCATTTTGCTCATTTATTGAA | 57.068 | 25.926 | 0.00 | 0.00 | 32.78 | 2.69 |
67 | 68 | 9.932207 | AATTCACTCATTTTGCTCATTTATTGA | 57.068 | 25.926 | 0.00 | 0.00 | 0.00 | 2.57 |
72 | 73 | 8.981647 | GTGTAAATTCACTCATTTTGCTCATTT | 58.018 | 29.630 | 0.00 | 0.00 | 35.68 | 2.32 |
73 | 74 | 8.362639 | AGTGTAAATTCACTCATTTTGCTCATT | 58.637 | 29.630 | 0.00 | 0.00 | 44.07 | 2.57 |
74 | 75 | 7.889469 | AGTGTAAATTCACTCATTTTGCTCAT | 58.111 | 30.769 | 0.00 | 0.00 | 44.07 | 2.90 |
75 | 76 | 7.275888 | AGTGTAAATTCACTCATTTTGCTCA | 57.724 | 32.000 | 0.00 | 0.00 | 44.07 | 4.26 |
115 | 116 | 7.482169 | AATGGACTATCACATACGGATGTAT | 57.518 | 36.000 | 14.23 | 10.02 | 44.82 | 2.29 |
116 | 117 | 6.911250 | AATGGACTATCACATACGGATGTA | 57.089 | 37.500 | 14.23 | 2.61 | 44.82 | 2.29 |
118 | 119 | 6.223120 | TCAAATGGACTATCACATACGGATG | 58.777 | 40.000 | 5.94 | 5.94 | 39.16 | 3.51 |
119 | 120 | 6.419484 | TCAAATGGACTATCACATACGGAT | 57.581 | 37.500 | 0.00 | 0.00 | 0.00 | 4.18 |
120 | 121 | 5.862678 | TCAAATGGACTATCACATACGGA | 57.137 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
121 | 122 | 6.918892 | TTTCAAATGGACTATCACATACGG | 57.081 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
122 | 123 | 9.787532 | AAAATTTCAAATGGACTATCACATACG | 57.212 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
162 | 163 | 9.454859 | CAGAAAATACTCCCTCTGTTCTTAAAT | 57.545 | 33.333 | 0.00 | 0.00 | 32.38 | 1.40 |
163 | 164 | 7.883311 | CCAGAAAATACTCCCTCTGTTCTTAAA | 59.117 | 37.037 | 0.00 | 0.00 | 34.70 | 1.52 |
164 | 165 | 7.236847 | TCCAGAAAATACTCCCTCTGTTCTTAA | 59.763 | 37.037 | 0.00 | 0.00 | 34.70 | 1.85 |
165 | 166 | 6.729100 | TCCAGAAAATACTCCCTCTGTTCTTA | 59.271 | 38.462 | 0.00 | 0.00 | 34.70 | 2.10 |
166 | 167 | 5.548056 | TCCAGAAAATACTCCCTCTGTTCTT | 59.452 | 40.000 | 0.00 | 0.00 | 34.70 | 2.52 |
167 | 168 | 5.046231 | GTCCAGAAAATACTCCCTCTGTTCT | 60.046 | 44.000 | 0.00 | 0.00 | 34.70 | 3.01 |
168 | 169 | 5.179533 | GTCCAGAAAATACTCCCTCTGTTC | 58.820 | 45.833 | 0.00 | 0.00 | 34.70 | 3.18 |
169 | 170 | 4.322801 | CGTCCAGAAAATACTCCCTCTGTT | 60.323 | 45.833 | 0.00 | 0.00 | 34.70 | 3.16 |
170 | 171 | 3.195825 | CGTCCAGAAAATACTCCCTCTGT | 59.804 | 47.826 | 0.00 | 0.00 | 34.70 | 3.41 |
171 | 172 | 3.195825 | ACGTCCAGAAAATACTCCCTCTG | 59.804 | 47.826 | 0.00 | 0.00 | 35.99 | 3.35 |
172 | 173 | 3.442076 | ACGTCCAGAAAATACTCCCTCT | 58.558 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
173 | 174 | 3.889520 | ACGTCCAGAAAATACTCCCTC | 57.110 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
174 | 175 | 5.012354 | TGTTTACGTCCAGAAAATACTCCCT | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
175 | 176 | 5.240121 | TGTTTACGTCCAGAAAATACTCCC | 58.760 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
176 | 177 | 6.790285 | TTGTTTACGTCCAGAAAATACTCC | 57.210 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
177 | 178 | 8.340443 | AGTTTTGTTTACGTCCAGAAAATACTC | 58.660 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
178 | 179 | 8.217131 | AGTTTTGTTTACGTCCAGAAAATACT | 57.783 | 30.769 | 0.00 | 0.00 | 0.00 | 2.12 |
179 | 180 | 8.845942 | AAGTTTTGTTTACGTCCAGAAAATAC | 57.154 | 30.769 | 0.00 | 0.00 | 0.00 | 1.89 |
180 | 181 | 8.895737 | AGAAGTTTTGTTTACGTCCAGAAAATA | 58.104 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
181 | 182 | 7.768240 | AGAAGTTTTGTTTACGTCCAGAAAAT | 58.232 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
185 | 186 | 5.644636 | ACAAGAAGTTTTGTTTACGTCCAGA | 59.355 | 36.000 | 0.00 | 0.00 | 38.05 | 3.86 |
192 | 193 | 5.229260 | CGGAGCAACAAGAAGTTTTGTTTAC | 59.771 | 40.000 | 11.19 | 8.30 | 46.18 | 2.01 |
193 | 194 | 5.336744 | CGGAGCAACAAGAAGTTTTGTTTA | 58.663 | 37.500 | 11.19 | 0.00 | 46.18 | 2.01 |
229 | 230 | 1.202830 | ACCGGCAAAACTCACCATGTA | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
273 | 275 | 3.242608 | CCAACACTACCAAGACACAAACG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 3.60 |
298 | 300 | 5.391843 | CGGTATCAAATGACACAATTCTGCA | 60.392 | 40.000 | 0.00 | 0.00 | 0.00 | 4.41 |
299 | 301 | 5.030295 | CGGTATCAAATGACACAATTCTGC | 58.970 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
301 | 303 | 6.599244 | ACATCGGTATCAAATGACACAATTCT | 59.401 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
302 | 304 | 6.785191 | ACATCGGTATCAAATGACACAATTC | 58.215 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
303 | 305 | 6.757897 | ACATCGGTATCAAATGACACAATT | 57.242 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
304 | 306 | 7.047891 | AGTACATCGGTATCAAATGACACAAT | 58.952 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
312 | 328 | 9.436957 | GGATGATAAAGTACATCGGTATCAAAT | 57.563 | 33.333 | 0.00 | 0.00 | 42.34 | 2.32 |
315 | 331 | 7.232737 | AGTGGATGATAAAGTACATCGGTATCA | 59.767 | 37.037 | 0.00 | 1.55 | 42.34 | 2.15 |
318 | 334 | 6.971726 | AGTGGATGATAAAGTACATCGGTA | 57.028 | 37.500 | 0.00 | 0.00 | 42.34 | 4.02 |
321 | 337 | 8.818141 | ACATAAGTGGATGATAAAGTACATCG | 57.182 | 34.615 | 0.00 | 0.00 | 42.34 | 3.84 |
394 | 410 | 5.516339 | GCAATCGCTACTTATGCAAATTGTT | 59.484 | 36.000 | 0.00 | 0.00 | 36.48 | 2.83 |
416 | 432 | 7.605691 | CCCAAACACAATAAAATAAATCCAGCA | 59.394 | 33.333 | 0.00 | 0.00 | 0.00 | 4.41 |
465 | 481 | 9.709495 | CCAATCAATTTTTCACTTGGAGAAATA | 57.291 | 29.630 | 0.00 | 0.00 | 38.85 | 1.40 |
473 | 489 | 9.695526 | TCTTACATCCAATCAATTTTTCACTTG | 57.304 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
515 | 532 | 6.769341 | TCTCTGCAGCATTTGTACATGATATT | 59.231 | 34.615 | 9.47 | 0.00 | 0.00 | 1.28 |
518 | 535 | 4.520179 | TCTCTGCAGCATTTGTACATGAT | 58.480 | 39.130 | 9.47 | 0.00 | 0.00 | 2.45 |
519 | 536 | 3.937079 | CTCTCTGCAGCATTTGTACATGA | 59.063 | 43.478 | 9.47 | 0.00 | 0.00 | 3.07 |
520 | 537 | 3.937079 | TCTCTCTGCAGCATTTGTACATG | 59.063 | 43.478 | 9.47 | 0.00 | 0.00 | 3.21 |
521 | 538 | 4.081254 | TCTCTCTCTGCAGCATTTGTACAT | 60.081 | 41.667 | 9.47 | 0.00 | 0.00 | 2.29 |
523 | 540 | 3.854666 | TCTCTCTCTGCAGCATTTGTAC | 58.145 | 45.455 | 9.47 | 0.00 | 0.00 | 2.90 |
526 | 543 | 4.761235 | TTTTCTCTCTCTGCAGCATTTG | 57.239 | 40.909 | 9.47 | 0.00 | 0.00 | 2.32 |
547 | 564 | 2.092646 | GCCCTTGGGTTGGTTTCTTTTT | 60.093 | 45.455 | 7.61 | 0.00 | 0.00 | 1.94 |
548 | 565 | 1.488812 | GCCCTTGGGTTGGTTTCTTTT | 59.511 | 47.619 | 7.61 | 0.00 | 0.00 | 2.27 |
549 | 566 | 1.128200 | GCCCTTGGGTTGGTTTCTTT | 58.872 | 50.000 | 7.61 | 0.00 | 0.00 | 2.52 |
550 | 567 | 0.264657 | AGCCCTTGGGTTGGTTTCTT | 59.735 | 50.000 | 7.61 | 0.00 | 0.00 | 2.52 |
551 | 568 | 1.154430 | TAGCCCTTGGGTTGGTTTCT | 58.846 | 50.000 | 7.61 | 0.00 | 34.28 | 2.52 |
552 | 569 | 2.003937 | TTAGCCCTTGGGTTGGTTTC | 57.996 | 50.000 | 7.61 | 0.00 | 34.28 | 2.78 |
553 | 570 | 2.536066 | GATTAGCCCTTGGGTTGGTTT | 58.464 | 47.619 | 7.61 | 0.00 | 34.28 | 3.27 |
554 | 571 | 1.273041 | GGATTAGCCCTTGGGTTGGTT | 60.273 | 52.381 | 7.61 | 0.00 | 34.28 | 3.67 |
555 | 572 | 0.335019 | GGATTAGCCCTTGGGTTGGT | 59.665 | 55.000 | 7.61 | 0.00 | 34.28 | 3.67 |
556 | 573 | 0.631212 | AGGATTAGCCCTTGGGTTGG | 59.369 | 55.000 | 7.61 | 0.00 | 37.37 | 3.77 |
557 | 574 | 1.747206 | CGAGGATTAGCCCTTGGGTTG | 60.747 | 57.143 | 7.61 | 0.00 | 36.49 | 3.77 |
558 | 575 | 0.546598 | CGAGGATTAGCCCTTGGGTT | 59.453 | 55.000 | 7.61 | 3.76 | 36.49 | 4.11 |
559 | 576 | 0.620700 | ACGAGGATTAGCCCTTGGGT | 60.621 | 55.000 | 7.61 | 0.00 | 41.18 | 4.51 |
560 | 577 | 0.546598 | AACGAGGATTAGCCCTTGGG | 59.453 | 55.000 | 0.32 | 0.32 | 41.18 | 4.12 |
561 | 578 | 1.668419 | CAACGAGGATTAGCCCTTGG | 58.332 | 55.000 | 0.00 | 0.00 | 41.18 | 3.61 |
562 | 579 | 1.668419 | CCAACGAGGATTAGCCCTTG | 58.332 | 55.000 | 0.00 | 0.00 | 42.32 | 3.61 |
563 | 580 | 0.546598 | CCCAACGAGGATTAGCCCTT | 59.453 | 55.000 | 0.00 | 0.00 | 41.22 | 3.95 |
564 | 581 | 0.326238 | TCCCAACGAGGATTAGCCCT | 60.326 | 55.000 | 0.00 | 0.00 | 41.22 | 5.19 |
565 | 582 | 0.765510 | ATCCCAACGAGGATTAGCCC | 59.234 | 55.000 | 0.00 | 0.00 | 44.61 | 5.19 |
572 | 589 | 8.930527 | TCTTCTATAAATAAATCCCAACGAGGA | 58.069 | 33.333 | 0.00 | 0.00 | 41.22 | 3.71 |
573 | 590 | 9.555727 | TTCTTCTATAAATAAATCCCAACGAGG | 57.444 | 33.333 | 0.00 | 0.00 | 37.03 | 4.63 |
602 | 619 | 2.791396 | GAACGCGTGGTGCTCGTAGA | 62.791 | 60.000 | 14.98 | 0.00 | 43.27 | 2.59 |
603 | 620 | 2.430244 | AACGCGTGGTGCTCGTAG | 60.430 | 61.111 | 14.98 | 0.00 | 43.27 | 3.51 |
604 | 621 | 2.429571 | GAACGCGTGGTGCTCGTA | 60.430 | 61.111 | 14.98 | 0.00 | 43.27 | 3.43 |
605 | 622 | 4.578898 | TGAACGCGTGGTGCTCGT | 62.579 | 61.111 | 14.98 | 0.00 | 43.27 | 4.18 |
606 | 623 | 3.281751 | CTTGAACGCGTGGTGCTCG | 62.282 | 63.158 | 14.98 | 0.00 | 43.27 | 5.03 |
607 | 624 | 1.772063 | AACTTGAACGCGTGGTGCTC | 61.772 | 55.000 | 14.98 | 6.74 | 43.27 | 4.26 |
608 | 625 | 1.817941 | AACTTGAACGCGTGGTGCT | 60.818 | 52.632 | 14.98 | 0.00 | 43.27 | 4.40 |
609 | 626 | 1.654137 | CAACTTGAACGCGTGGTGC | 60.654 | 57.895 | 14.98 | 3.32 | 41.47 | 5.01 |
610 | 627 | 1.010125 | CCAACTTGAACGCGTGGTG | 60.010 | 57.895 | 14.98 | 9.26 | 0.00 | 4.17 |
611 | 628 | 2.184167 | CCCAACTTGAACGCGTGGT | 61.184 | 57.895 | 14.98 | 7.08 | 0.00 | 4.16 |
612 | 629 | 1.890041 | TCCCAACTTGAACGCGTGG | 60.890 | 57.895 | 14.98 | 7.74 | 0.00 | 4.94 |
613 | 630 | 1.157870 | AGTCCCAACTTGAACGCGTG | 61.158 | 55.000 | 14.98 | 1.65 | 28.74 | 5.34 |
614 | 631 | 0.463116 | AAGTCCCAACTTGAACGCGT | 60.463 | 50.000 | 5.58 | 5.58 | 44.13 | 6.01 |
615 | 632 | 2.317230 | AAGTCCCAACTTGAACGCG | 58.683 | 52.632 | 3.53 | 3.53 | 44.13 | 6.01 |
622 | 639 | 3.502123 | TCCGAATTCAAGTCCCAACTT | 57.498 | 42.857 | 6.22 | 0.00 | 46.80 | 2.66 |
623 | 640 | 3.347216 | CATCCGAATTCAAGTCCCAACT | 58.653 | 45.455 | 6.22 | 0.00 | 37.32 | 3.16 |
624 | 641 | 2.423538 | CCATCCGAATTCAAGTCCCAAC | 59.576 | 50.000 | 6.22 | 0.00 | 0.00 | 3.77 |
625 | 642 | 2.620367 | CCCATCCGAATTCAAGTCCCAA | 60.620 | 50.000 | 6.22 | 0.00 | 0.00 | 4.12 |
626 | 643 | 1.064758 | CCCATCCGAATTCAAGTCCCA | 60.065 | 52.381 | 6.22 | 0.00 | 0.00 | 4.37 |
627 | 644 | 1.680338 | CCCATCCGAATTCAAGTCCC | 58.320 | 55.000 | 6.22 | 0.00 | 0.00 | 4.46 |
628 | 645 | 1.025041 | GCCCATCCGAATTCAAGTCC | 58.975 | 55.000 | 6.22 | 0.00 | 0.00 | 3.85 |
629 | 646 | 1.672881 | CAGCCCATCCGAATTCAAGTC | 59.327 | 52.381 | 6.22 | 0.00 | 0.00 | 3.01 |
630 | 647 | 1.004745 | ACAGCCCATCCGAATTCAAGT | 59.995 | 47.619 | 6.22 | 0.00 | 0.00 | 3.16 |
631 | 648 | 1.672881 | GACAGCCCATCCGAATTCAAG | 59.327 | 52.381 | 6.22 | 0.00 | 0.00 | 3.02 |
632 | 649 | 1.004161 | TGACAGCCCATCCGAATTCAA | 59.996 | 47.619 | 6.22 | 0.00 | 0.00 | 2.69 |
633 | 650 | 0.617935 | TGACAGCCCATCCGAATTCA | 59.382 | 50.000 | 6.22 | 0.00 | 0.00 | 2.57 |
634 | 651 | 1.303309 | CTGACAGCCCATCCGAATTC | 58.697 | 55.000 | 0.00 | 0.00 | 0.00 | 2.17 |
635 | 652 | 0.749454 | GCTGACAGCCCATCCGAATT | 60.749 | 55.000 | 17.01 | 0.00 | 34.48 | 2.17 |
636 | 653 | 1.153086 | GCTGACAGCCCATCCGAAT | 60.153 | 57.895 | 17.01 | 0.00 | 34.48 | 3.34 |
637 | 654 | 2.123248 | TTGCTGACAGCCCATCCGAA | 62.123 | 55.000 | 24.33 | 7.47 | 41.51 | 4.30 |
638 | 655 | 2.592032 | TTGCTGACAGCCCATCCGA | 61.592 | 57.895 | 24.33 | 0.79 | 41.51 | 4.55 |
639 | 656 | 2.046023 | TTGCTGACAGCCCATCCG | 60.046 | 61.111 | 24.33 | 0.00 | 41.51 | 4.18 |
640 | 657 | 0.682209 | ATGTTGCTGACAGCCCATCC | 60.682 | 55.000 | 24.33 | 8.23 | 42.62 | 3.51 |
641 | 658 | 0.737219 | GATGTTGCTGACAGCCCATC | 59.263 | 55.000 | 27.56 | 27.56 | 42.62 | 3.51 |
642 | 659 | 0.038599 | TGATGTTGCTGACAGCCCAT | 59.961 | 50.000 | 24.33 | 23.34 | 43.96 | 4.00 |
643 | 660 | 0.607217 | CTGATGTTGCTGACAGCCCA | 60.607 | 55.000 | 24.33 | 19.95 | 43.96 | 5.36 |
644 | 661 | 1.930908 | GCTGATGTTGCTGACAGCCC | 61.931 | 60.000 | 24.33 | 15.08 | 43.96 | 5.19 |
645 | 662 | 1.505353 | GCTGATGTTGCTGACAGCC | 59.495 | 57.895 | 24.33 | 10.67 | 43.96 | 4.85 |
647 | 664 | 1.085091 | GGAGCTGATGTTGCTGACAG | 58.915 | 55.000 | 0.00 | 0.00 | 42.62 | 3.51 |
648 | 665 | 0.671472 | CGGAGCTGATGTTGCTGACA | 60.671 | 55.000 | 0.00 | 0.00 | 41.30 | 3.58 |
649 | 666 | 1.364626 | CCGGAGCTGATGTTGCTGAC | 61.365 | 60.000 | 0.00 | 0.00 | 41.30 | 3.51 |
650 | 667 | 1.078918 | CCGGAGCTGATGTTGCTGA | 60.079 | 57.895 | 0.00 | 0.00 | 41.30 | 4.26 |
651 | 668 | 1.078918 | TCCGGAGCTGATGTTGCTG | 60.079 | 57.895 | 0.00 | 0.00 | 41.30 | 4.41 |
652 | 669 | 1.220206 | CTCCGGAGCTGATGTTGCT | 59.780 | 57.895 | 20.67 | 0.00 | 44.24 | 3.91 |
653 | 670 | 3.805267 | CTCCGGAGCTGATGTTGC | 58.195 | 61.111 | 20.67 | 0.00 | 0.00 | 4.17 |
682 | 699 | 3.134127 | GCATTGAGGACGGGGCAC | 61.134 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
683 | 700 | 3.329889 | AGCATTGAGGACGGGGCA | 61.330 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
684 | 701 | 2.825836 | CAGCATTGAGGACGGGGC | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
685 | 702 | 2.825836 | GCAGCATTGAGGACGGGG | 60.826 | 66.667 | 0.00 | 0.00 | 0.00 | 5.73 |
686 | 703 | 2.046023 | TGCAGCATTGAGGACGGG | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 5.28 |
687 | 704 | 1.078918 | TCTGCAGCATTGAGGACGG | 60.079 | 57.895 | 9.47 | 0.00 | 0.00 | 4.79 |
688 | 705 | 0.108472 | TCTCTGCAGCATTGAGGACG | 60.108 | 55.000 | 9.47 | 0.00 | 0.00 | 4.79 |
689 | 706 | 1.206610 | TCTCTCTGCAGCATTGAGGAC | 59.793 | 52.381 | 9.47 | 0.00 | 0.00 | 3.85 |
690 | 707 | 1.481363 | CTCTCTCTGCAGCATTGAGGA | 59.519 | 52.381 | 9.47 | 11.33 | 0.00 | 3.71 |
691 | 708 | 1.481363 | TCTCTCTCTGCAGCATTGAGG | 59.519 | 52.381 | 9.47 | 12.50 | 0.00 | 3.86 |
692 | 709 | 2.931325 | GTTCTCTCTCTGCAGCATTGAG | 59.069 | 50.000 | 9.47 | 13.16 | 0.00 | 3.02 |
693 | 710 | 2.354503 | GGTTCTCTCTCTGCAGCATTGA | 60.355 | 50.000 | 9.47 | 3.73 | 0.00 | 2.57 |
694 | 711 | 2.008329 | GGTTCTCTCTCTGCAGCATTG | 58.992 | 52.381 | 9.47 | 0.00 | 0.00 | 2.82 |
870 | 891 | 1.751351 | GGCTTTTATTGGAGGCAGGAC | 59.249 | 52.381 | 0.00 | 0.00 | 38.25 | 3.85 |
920 | 953 | 3.009723 | TCGGATTTTGGAATGCTCTGAC | 58.990 | 45.455 | 0.00 | 0.00 | 32.01 | 3.51 |
933 | 983 | 0.039527 | GCGGTGCTTGTTCGGATTTT | 60.040 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
934 | 984 | 1.579429 | GCGGTGCTTGTTCGGATTT | 59.421 | 52.632 | 0.00 | 0.00 | 0.00 | 2.17 |
935 | 985 | 2.332654 | GGCGGTGCTTGTTCGGATT | 61.333 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
936 | 986 | 2.746277 | GGCGGTGCTTGTTCGGAT | 60.746 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
1599 | 1701 | 1.342819 | CAAGACCCAATCCCGCAAAAA | 59.657 | 47.619 | 0.00 | 0.00 | 0.00 | 1.94 |
1602 | 1704 | 0.693622 | TACAAGACCCAATCCCGCAA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1603 | 1705 | 0.693622 | TTACAAGACCCAATCCCGCA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
1605 | 1707 | 2.099098 | GCAATTACAAGACCCAATCCCG | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
1606 | 1708 | 2.430694 | GGCAATTACAAGACCCAATCCC | 59.569 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1607 | 1709 | 3.365472 | AGGCAATTACAAGACCCAATCC | 58.635 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
1608 | 1710 | 5.193679 | ACTAGGCAATTACAAGACCCAATC | 58.806 | 41.667 | 0.00 | 0.00 | 0.00 | 2.67 |
1609 | 1711 | 5.044846 | AGACTAGGCAATTACAAGACCCAAT | 60.045 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1611 | 1713 | 3.844211 | AGACTAGGCAATTACAAGACCCA | 59.156 | 43.478 | 0.00 | 0.00 | 0.00 | 4.51 |
1612 | 1714 | 4.192317 | CAGACTAGGCAATTACAAGACCC | 58.808 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
1614 | 1716 | 6.531948 | CACTACAGACTAGGCAATTACAAGAC | 59.468 | 42.308 | 0.00 | 0.00 | 0.00 | 3.01 |
1615 | 1717 | 6.351033 | CCACTACAGACTAGGCAATTACAAGA | 60.351 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
1616 | 1718 | 5.812642 | CCACTACAGACTAGGCAATTACAAG | 59.187 | 44.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1617 | 1719 | 5.730550 | CCACTACAGACTAGGCAATTACAA | 58.269 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
1743 | 1852 | 1.266989 | GCAAAAGCACGCAACAAACAG | 60.267 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
1784 | 1894 | 1.279271 | CTGACAGAAGGTACAAGGGGG | 59.721 | 57.143 | 0.00 | 0.00 | 0.00 | 5.40 |
1961 | 2118 | 6.872920 | TGATTGGCCAAAATAATCTACAACC | 58.127 | 36.000 | 24.71 | 0.00 | 33.21 | 3.77 |
2036 | 2194 | 7.421530 | TGCATCTAGAAGAAGTTTGTTGTAC | 57.578 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2144 | 2302 | 9.221933 | TCTTAATTTTTCAGTAAGCATCCGTTA | 57.778 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
2191 | 2349 | 6.986250 | AGCTCTTCCCTTGTCTTAATTTTTG | 58.014 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2202 | 2360 | 2.632763 | ACTCCTAGCTCTTCCCTTGT | 57.367 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2209 | 2367 | 2.661718 | GCCTGACTACTCCTAGCTCTT | 58.338 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
2243 | 2401 | 3.705051 | ACAAATCAGGACCGAGGTAGTA | 58.295 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
2244 | 2402 | 2.537143 | ACAAATCAGGACCGAGGTAGT | 58.463 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
2245 | 2403 | 3.262420 | CAACAAATCAGGACCGAGGTAG | 58.738 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2246 | 2404 | 2.027561 | CCAACAAATCAGGACCGAGGTA | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
2247 | 2405 | 1.271379 | CCAACAAATCAGGACCGAGGT | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2248 | 2406 | 1.271379 | ACCAACAAATCAGGACCGAGG | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
2249 | 2407 | 2.076863 | GACCAACAAATCAGGACCGAG | 58.923 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
2250 | 2408 | 1.271163 | GGACCAACAAATCAGGACCGA | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
2251 | 2409 | 1.165270 | GGACCAACAAATCAGGACCG | 58.835 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2252 | 2410 | 1.075536 | AGGGACCAACAAATCAGGACC | 59.924 | 52.381 | 0.00 | 0.00 | 36.67 | 4.46 |
2253 | 2411 | 2.586648 | AGGGACCAACAAATCAGGAC | 57.413 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2254 | 2412 | 4.946160 | AATAGGGACCAACAAATCAGGA | 57.054 | 40.909 | 0.00 | 0.00 | 0.00 | 3.86 |
2255 | 2413 | 8.940397 | ATTATAATAGGGACCAACAAATCAGG | 57.060 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
2256 | 2414 | 9.799106 | AGATTATAATAGGGACCAACAAATCAG | 57.201 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2257 | 2415 | 9.573166 | CAGATTATAATAGGGACCAACAAATCA | 57.427 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2258 | 2416 | 9.574516 | ACAGATTATAATAGGGACCAACAAATC | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2259 | 2417 | 9.354673 | CACAGATTATAATAGGGACCAACAAAT | 57.645 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2260 | 2418 | 7.284489 | GCACAGATTATAATAGGGACCAACAAA | 59.716 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
2261 | 2419 | 6.770785 | GCACAGATTATAATAGGGACCAACAA | 59.229 | 38.462 | 0.00 | 0.00 | 0.00 | 2.83 |
2262 | 2420 | 6.296026 | GCACAGATTATAATAGGGACCAACA | 58.704 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2263 | 2421 | 5.705905 | GGCACAGATTATAATAGGGACCAAC | 59.294 | 44.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2264 | 2422 | 5.371176 | TGGCACAGATTATAATAGGGACCAA | 59.629 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2265 | 2423 | 4.910913 | TGGCACAGATTATAATAGGGACCA | 59.089 | 41.667 | 0.00 | 5.18 | 0.00 | 4.02 |
2266 | 2424 | 5.499004 | TGGCACAGATTATAATAGGGACC | 57.501 | 43.478 | 0.00 | 2.92 | 0.00 | 4.46 |
2267 | 2425 | 6.998673 | AGTTTGGCACAGATTATAATAGGGAC | 59.001 | 38.462 | 0.00 | 0.00 | 42.39 | 4.46 |
2268 | 2426 | 7.149202 | AGTTTGGCACAGATTATAATAGGGA | 57.851 | 36.000 | 0.00 | 0.00 | 42.39 | 4.20 |
2269 | 2427 | 7.823745 | AAGTTTGGCACAGATTATAATAGGG | 57.176 | 36.000 | 0.00 | 0.00 | 42.39 | 3.53 |
2307 | 2465 | 9.740239 | GATCACATGCATGAACATTTTATTAGT | 57.260 | 29.630 | 32.75 | 2.07 | 30.82 | 2.24 |
2308 | 2466 | 9.961265 | AGATCACATGCATGAACATTTTATTAG | 57.039 | 29.630 | 32.75 | 1.29 | 30.82 | 1.73 |
2313 | 2471 | 9.661563 | ATTTTAGATCACATGCATGAACATTTT | 57.338 | 25.926 | 32.75 | 13.43 | 30.82 | 1.82 |
2314 | 2472 | 9.661563 | AATTTTAGATCACATGCATGAACATTT | 57.338 | 25.926 | 32.75 | 16.81 | 30.82 | 2.32 |
2350 | 2508 | 9.912634 | CTTGGATTTGTATTTGAACATAGTGTT | 57.087 | 29.630 | 0.00 | 0.00 | 44.37 | 3.32 |
2351 | 2509 | 8.522830 | CCTTGGATTTGTATTTGAACATAGTGT | 58.477 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
2352 | 2510 | 8.739039 | TCCTTGGATTTGTATTTGAACATAGTG | 58.261 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
2353 | 2511 | 8.877864 | TCCTTGGATTTGTATTTGAACATAGT | 57.122 | 30.769 | 0.00 | 0.00 | 0.00 | 2.12 |
2369 | 2527 | 9.844257 | TGTCAACAAAAATTAAATCCTTGGATT | 57.156 | 25.926 | 8.94 | 8.94 | 0.00 | 3.01 |
2371 | 2529 | 9.270640 | CATGTCAACAAAAATTAAATCCTTGGA | 57.729 | 29.630 | 0.00 | 0.00 | 0.00 | 3.53 |
2372 | 2530 | 8.016801 | GCATGTCAACAAAAATTAAATCCTTGG | 58.983 | 33.333 | 0.00 | 0.00 | 0.00 | 3.61 |
2373 | 2531 | 8.557864 | TGCATGTCAACAAAAATTAAATCCTTG | 58.442 | 29.630 | 0.00 | 0.00 | 0.00 | 3.61 |
2374 | 2532 | 8.558700 | GTGCATGTCAACAAAAATTAAATCCTT | 58.441 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
2375 | 2533 | 7.933033 | AGTGCATGTCAACAAAAATTAAATCCT | 59.067 | 29.630 | 0.00 | 0.00 | 0.00 | 3.24 |
2376 | 2534 | 8.086851 | AGTGCATGTCAACAAAAATTAAATCC | 57.913 | 30.769 | 0.00 | 0.00 | 0.00 | 3.01 |
2379 | 2537 | 9.371136 | TGTTAGTGCATGTCAACAAAAATTAAA | 57.629 | 25.926 | 0.00 | 0.00 | 0.00 | 1.52 |
2380 | 2538 | 8.932945 | TGTTAGTGCATGTCAACAAAAATTAA | 57.067 | 26.923 | 0.00 | 0.00 | 0.00 | 1.40 |
2381 | 2539 | 9.539825 | AATGTTAGTGCATGTCAACAAAAATTA | 57.460 | 25.926 | 8.71 | 0.00 | 34.79 | 1.40 |
2382 | 2540 | 8.436046 | AATGTTAGTGCATGTCAACAAAAATT | 57.564 | 26.923 | 8.71 | 0.00 | 34.79 | 1.82 |
2383 | 2541 | 8.436046 | AAATGTTAGTGCATGTCAACAAAAAT | 57.564 | 26.923 | 8.71 | 0.00 | 34.79 | 1.82 |
2384 | 2542 | 7.840342 | AAATGTTAGTGCATGTCAACAAAAA | 57.160 | 28.000 | 8.71 | 0.00 | 34.79 | 1.94 |
2385 | 2543 | 7.840342 | AAAATGTTAGTGCATGTCAACAAAA | 57.160 | 28.000 | 8.71 | 0.00 | 34.79 | 2.44 |
2386 | 2544 | 9.190858 | GATAAAATGTTAGTGCATGTCAACAAA | 57.809 | 29.630 | 8.71 | 0.00 | 34.79 | 2.83 |
2387 | 2545 | 8.355913 | TGATAAAATGTTAGTGCATGTCAACAA | 58.644 | 29.630 | 8.71 | 0.00 | 34.79 | 2.83 |
2388 | 2546 | 7.880105 | TGATAAAATGTTAGTGCATGTCAACA | 58.120 | 30.769 | 0.00 | 0.00 | 35.53 | 3.33 |
2389 | 2547 | 8.023128 | ACTGATAAAATGTTAGTGCATGTCAAC | 58.977 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2390 | 2548 | 8.109705 | ACTGATAAAATGTTAGTGCATGTCAA | 57.890 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
2391 | 2549 | 7.686438 | ACTGATAAAATGTTAGTGCATGTCA | 57.314 | 32.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2430 | 2588 | 9.884636 | GTCCCCTTTGTAATTTATGCTAAATTT | 57.115 | 29.630 | 14.76 | 0.00 | 32.64 | 1.82 |
2431 | 2589 | 9.267071 | AGTCCCCTTTGTAATTTATGCTAAATT | 57.733 | 29.630 | 14.27 | 14.27 | 34.55 | 1.82 |
2432 | 2590 | 8.838649 | AGTCCCCTTTGTAATTTATGCTAAAT | 57.161 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
2433 | 2591 | 9.756571 | TTAGTCCCCTTTGTAATTTATGCTAAA | 57.243 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
2434 | 2592 | 9.930158 | ATTAGTCCCCTTTGTAATTTATGCTAA | 57.070 | 29.630 | 0.00 | 0.00 | 0.00 | 3.09 |
2436 | 2594 | 9.930158 | TTATTAGTCCCCTTTGTAATTTATGCT | 57.070 | 29.630 | 0.00 | 0.00 | 0.00 | 3.79 |
2442 | 2600 | 9.916360 | CCTAGTTTATTAGTCCCCTTTGTAATT | 57.084 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2443 | 2601 | 9.287818 | TCCTAGTTTATTAGTCCCCTTTGTAAT | 57.712 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
2444 | 2602 | 8.542926 | GTCCTAGTTTATTAGTCCCCTTTGTAA | 58.457 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
2445 | 2603 | 7.147846 | CGTCCTAGTTTATTAGTCCCCTTTGTA | 60.148 | 40.741 | 0.00 | 0.00 | 0.00 | 2.41 |
2446 | 2604 | 6.351626 | CGTCCTAGTTTATTAGTCCCCTTTGT | 60.352 | 42.308 | 0.00 | 0.00 | 0.00 | 2.83 |
2447 | 2605 | 6.047231 | CGTCCTAGTTTATTAGTCCCCTTTG | 58.953 | 44.000 | 0.00 | 0.00 | 0.00 | 2.77 |
2448 | 2606 | 5.129980 | CCGTCCTAGTTTATTAGTCCCCTTT | 59.870 | 44.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2449 | 2607 | 4.652881 | CCGTCCTAGTTTATTAGTCCCCTT | 59.347 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
2450 | 2608 | 4.078980 | TCCGTCCTAGTTTATTAGTCCCCT | 60.079 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
2451 | 2609 | 4.218312 | TCCGTCCTAGTTTATTAGTCCCC | 58.782 | 47.826 | 0.00 | 0.00 | 0.00 | 4.81 |
2452 | 2610 | 4.280425 | CCTCCGTCCTAGTTTATTAGTCCC | 59.720 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2453 | 2611 | 4.892345 | ACCTCCGTCCTAGTTTATTAGTCC | 59.108 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
2454 | 2612 | 6.770303 | ACTACCTCCGTCCTAGTTTATTAGTC | 59.230 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
2455 | 2613 | 6.667661 | ACTACCTCCGTCCTAGTTTATTAGT | 58.332 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2456 | 2614 | 7.936301 | AGTACTACCTCCGTCCTAGTTTATTAG | 59.064 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
2457 | 2615 | 7.806180 | AGTACTACCTCCGTCCTAGTTTATTA | 58.194 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
2458 | 2616 | 6.667661 | AGTACTACCTCCGTCCTAGTTTATT | 58.332 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2459 | 2617 | 6.259346 | AGTACTACCTCCGTCCTAGTTTAT | 57.741 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
2460 | 2618 | 5.700402 | AGTACTACCTCCGTCCTAGTTTA | 57.300 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
2461 | 2619 | 4.582973 | AGTACTACCTCCGTCCTAGTTT | 57.417 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
2462 | 2620 | 4.719273 | ACTAGTACTACCTCCGTCCTAGTT | 59.281 | 45.833 | 0.00 | 0.00 | 32.00 | 2.24 |
2463 | 2621 | 4.294347 | ACTAGTACTACCTCCGTCCTAGT | 58.706 | 47.826 | 0.00 | 0.00 | 31.33 | 2.57 |
2464 | 2622 | 4.953940 | ACTAGTACTACCTCCGTCCTAG | 57.046 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2465 | 2623 | 5.706447 | TCTACTAGTACTACCTCCGTCCTA | 58.294 | 45.833 | 0.00 | 0.00 | 0.00 | 2.94 |
2466 | 2624 | 4.551671 | TCTACTAGTACTACCTCCGTCCT | 58.448 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
2467 | 2625 | 4.946478 | TCTACTAGTACTACCTCCGTCC | 57.054 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2468 | 2626 | 6.155475 | TCTTCTACTAGTACTACCTCCGTC | 57.845 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
2469 | 2627 | 6.552445 | TTCTTCTACTAGTACTACCTCCGT | 57.448 | 41.667 | 0.00 | 0.00 | 0.00 | 4.69 |
2470 | 2628 | 6.991531 | ACATTCTTCTACTAGTACTACCTCCG | 59.008 | 42.308 | 0.00 | 0.00 | 0.00 | 4.63 |
2471 | 2629 | 8.750515 | AACATTCTTCTACTAGTACTACCTCC | 57.249 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
2473 | 2631 | 9.531158 | ACAAACATTCTTCTACTAGTACTACCT | 57.469 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
2493 | 2651 | 7.940137 | ACTGTATTTACCCTCATGTTACAAACA | 59.060 | 33.333 | 0.00 | 0.00 | 46.94 | 2.83 |
2494 | 2652 | 8.331730 | ACTGTATTTACCCTCATGTTACAAAC | 57.668 | 34.615 | 0.00 | 0.00 | 0.00 | 2.93 |
2504 | 2662 | 5.163385 | CCCGACAATACTGTATTTACCCTCA | 60.163 | 44.000 | 10.25 | 0.00 | 35.30 | 3.86 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.