Multiple sequence alignment - TraesCS5B01G468600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G468600 chr5B 100.000 2273 0 0 1 2273 642054518 642052246 0.000000e+00 4198.0
1 TraesCS5B01G468600 chr5B 95.395 608 20 4 1673 2273 590498724 590499330 0.000000e+00 961.0
2 TraesCS5B01G468600 chr5B 95.326 599 24 4 1679 2273 42267230 42267828 0.000000e+00 948.0
3 TraesCS5B01G468600 chr5B 94.728 607 22 3 1673 2271 659964762 659964158 0.000000e+00 935.0
4 TraesCS5B01G468600 chr5B 92.513 187 13 1 1 186 527473297 527473483 1.340000e-67 267.0
5 TraesCS5B01G468600 chr5B 88.889 81 7 2 1220 1299 395738767 395738846 5.170000e-17 99.0
6 TraesCS5B01G468600 chr2A 91.049 1039 76 4 260 1298 750367746 750368767 0.000000e+00 1387.0
7 TraesCS5B01G468600 chr3B 87.850 1037 119 6 266 1299 674434714 674433682 0.000000e+00 1210.0
8 TraesCS5B01G468600 chr3B 86.290 1043 135 7 260 1299 636870403 636871440 0.000000e+00 1127.0
9 TraesCS5B01G468600 chr3B 94.816 598 27 3 1673 2270 826316118 826316711 0.000000e+00 929.0
10 TraesCS5B01G468600 chr3B 95.349 86 4 0 176 261 254491803 254491888 1.090000e-28 137.0
11 TraesCS5B01G468600 chr3B 92.473 93 7 0 165 257 617960043 617959951 1.420000e-27 134.0
12 TraesCS5B01G468600 chr6A 87.512 1049 123 7 254 1298 463580557 463581601 0.000000e+00 1205.0
13 TraesCS5B01G468600 chr6A 94.624 93 5 0 165 257 22673553 22673461 6.540000e-31 145.0
14 TraesCS5B01G468600 chr7B 96.128 594 18 3 1673 2261 547443416 547442823 0.000000e+00 965.0
15 TraesCS5B01G468600 chr7B 95.326 599 18 4 1673 2261 547502925 547502327 0.000000e+00 942.0
16 TraesCS5B01G468600 chr7B 82.750 400 49 11 1289 1672 677419086 677418691 2.800000e-89 339.0
17 TraesCS5B01G468600 chr7B 93.011 186 13 0 1 186 624550422 624550607 2.880000e-69 272.0
18 TraesCS5B01G468600 chr4A 94.859 603 26 4 1672 2273 666371272 666371870 0.000000e+00 937.0
19 TraesCS5B01G468600 chr4A 94.290 613 24 4 1669 2273 656711407 656712016 0.000000e+00 928.0
20 TraesCS5B01G468600 chr2B 94.842 601 26 5 1673 2272 210005416 210004820 0.000000e+00 933.0
21 TraesCS5B01G468600 chr2B 85.302 381 39 11 1307 1672 228884376 228884754 5.930000e-101 377.0
22 TraesCS5B01G468600 chr2B 82.940 381 49 8 1307 1672 699037096 699037475 1.680000e-86 329.0
23 TraesCS5B01G468600 chr2B 90.909 99 9 0 162 260 346673686 346673784 1.420000e-27 134.0
24 TraesCS5B01G468600 chr2B 79.856 139 22 3 266 403 185775012 185774879 1.860000e-16 97.1
25 TraesCS5B01G468600 chr7A 81.513 1044 184 9 260 1299 89900115 89901153 0.000000e+00 850.0
26 TraesCS5B01G468600 chr7A 95.294 85 4 0 176 260 260990686 260990602 3.940000e-28 135.0
27 TraesCS5B01G468600 chr7D 91.196 443 38 1 859 1300 174120618 174121060 3.230000e-168 601.0
28 TraesCS5B01G468600 chr7D 90.860 186 15 2 1 186 14671566 14671383 4.850000e-62 248.0
29 TraesCS5B01G468600 chr7D 92.683 164 12 0 1 164 95130524 95130361 1.050000e-58 237.0
30 TraesCS5B01G468600 chr7D 90.449 178 17 0 1 178 126689725 126689548 3.770000e-58 235.0
31 TraesCS5B01G468600 chr4D 85.323 402 38 12 1283 1668 66509288 66509684 1.640000e-106 396.0
32 TraesCS5B01G468600 chr4D 84.910 391 41 9 1298 1672 69795049 69795437 1.650000e-101 379.0
33 TraesCS5B01G468600 chr4D 84.576 389 43 9 1298 1670 249040494 249040107 9.920000e-99 370.0
34 TraesCS5B01G468600 chr4D 82.692 312 34 9 1295 1589 344879266 344879574 2.240000e-65 259.0
35 TraesCS5B01G468600 chr4D 90.860 186 17 0 1 186 91513787 91513602 1.350000e-62 250.0
36 TraesCS5B01G468600 chr4D 91.124 169 14 1 1 169 440250953 440250786 6.320000e-56 228.0
37 TraesCS5B01G468600 chr4D 87.429 175 22 0 1 175 29190148 29190322 3.830000e-48 202.0
38 TraesCS5B01G468600 chr4D 94.118 85 5 0 176 260 5924958 5925042 1.830000e-26 130.0
39 TraesCS5B01G468600 chr4D 93.023 86 6 0 176 261 244436608 244436523 2.370000e-25 126.0
40 TraesCS5B01G468600 chr1D 84.635 397 43 9 1291 1672 366479177 366478784 1.650000e-101 379.0
41 TraesCS5B01G468600 chr1D 83.252 412 48 14 1279 1672 62837410 62837818 2.150000e-95 359.0
42 TraesCS5B01G468600 chr1D 88.060 268 32 0 1405 1672 199017189 199017456 3.640000e-83 318.0
43 TraesCS5B01G468600 chr1D 91.304 184 16 0 1 184 444285459 444285642 3.750000e-63 252.0
44 TraesCS5B01G468600 chr1D 90.533 169 16 0 1 169 44628001 44628169 8.170000e-55 224.0
45 TraesCS5B01G468600 chr1D 85.405 185 24 3 1 185 34008277 34008458 2.980000e-44 189.0
46 TraesCS5B01G468600 chr1D 95.349 86 4 0 176 261 493499962 493500047 1.090000e-28 137.0
47 TraesCS5B01G468600 chr1D 96.341 82 3 0 176 257 38548192 38548111 3.940000e-28 135.0
48 TraesCS5B01G468600 chr1D 93.258 89 6 0 176 264 307469382 307469294 5.090000e-27 132.0
49 TraesCS5B01G468600 chr1D 92.941 85 6 0 176 260 482525739 482525655 8.520000e-25 124.0
50 TraesCS5B01G468600 chr1D 92.857 84 6 0 178 261 114367220 114367303 3.070000e-24 122.0
51 TraesCS5B01G468600 chr5D 84.293 382 42 11 1307 1672 374260008 374259629 7.720000e-95 357.0
52 TraesCS5B01G468600 chr5D 89.179 268 29 0 1405 1672 37118649 37118382 3.620000e-88 335.0
53 TraesCS5B01G468600 chr5D 83.389 301 29 10 1307 1589 255071508 255071211 2.240000e-65 259.0
54 TraesCS5B01G468600 chr5D 91.908 173 14 0 1 173 557406501 557406673 2.260000e-60 243.0
55 TraesCS5B01G468600 chr5D 92.216 167 13 0 1 167 217079790 217079956 1.050000e-58 237.0
56 TraesCS5B01G468600 chr5D 90.964 166 15 0 5 170 434579270 434579105 8.170000e-55 224.0
57 TraesCS5B01G468600 chr5D 94.444 90 3 2 177 264 544667932 544667843 1.090000e-28 137.0
58 TraesCS5B01G468600 chr5D 95.349 86 4 0 176 261 545777211 545777296 1.090000e-28 137.0
59 TraesCS5B01G468600 chr1B 83.333 396 47 6 1289 1668 179793877 179793485 4.650000e-92 348.0
60 TraesCS5B01G468600 chr1B 95.506 178 8 0 1 178 602118128 602117951 3.700000e-73 285.0
61 TraesCS5B01G468600 chr1B 92.929 99 7 0 162 260 652100913 652101011 6.540000e-31 145.0
62 TraesCS5B01G468600 chr1A 82.707 399 51 10 1283 1665 397743969 397744365 2.800000e-89 339.0
63 TraesCS5B01G468600 chr1A 85.185 135 20 0 266 400 554274222 554274356 3.040000e-29 139.0
64 TraesCS5B01G468600 chr1A 82.734 139 22 2 266 403 93772470 93772333 3.070000e-24 122.0
65 TraesCS5B01G468600 chr4B 81.102 381 41 15 1307 1668 424718084 424717716 2.220000e-70 276.0
66 TraesCS5B01G468600 chr4B 95.322 171 8 0 1 171 525422689 525422519 2.880000e-69 272.0
67 TraesCS5B01G468600 chr4B 86.111 216 27 3 1086 1299 5921050 5920836 1.760000e-56 230.0
68 TraesCS5B01G468600 chr4B 94.505 91 5 0 176 266 580798829 580798919 8.460000e-30 141.0
69 TraesCS5B01G468600 chr6B 91.935 186 15 0 1 186 14894760 14894575 6.230000e-66 261.0
70 TraesCS5B01G468600 chr6B 82.028 217 23 2 1298 1499 380548627 380548412 1.080000e-38 171.0
71 TraesCS5B01G468600 chr2D 93.143 175 12 0 1 175 18471141 18470967 8.060000e-65 257.0
72 TraesCS5B01G468600 chr2D 82.109 313 36 12 1295 1589 598725789 598726099 1.350000e-62 250.0
73 TraesCS5B01G468600 chr2D 91.061 179 16 0 1 179 43213557 43213379 2.260000e-60 243.0
74 TraesCS5B01G468600 chr2D 69.817 1037 271 32 266 1280 32412604 32411588 2.350000e-30 143.0
75 TraesCS5B01G468600 chr2D 93.258 89 6 0 176 264 326271309 326271221 5.090000e-27 132.0
76 TraesCS5B01G468600 chr3D 92.442 172 13 0 1 172 540931065 540930894 1.740000e-61 246.0
77 TraesCS5B01G468600 chr3D 91.061 179 16 0 1 179 573929241 573929419 2.260000e-60 243.0
78 TraesCS5B01G468600 chr3D 90.722 97 8 1 162 258 136399476 136399571 6.590000e-26 128.0
79 TraesCS5B01G468600 chr6D 88.360 189 19 2 1 186 392472763 392472951 8.170000e-55 224.0
80 TraesCS5B01G468600 chr6D 95.506 89 4 0 173 261 314920061 314920149 2.350000e-30 143.0
81 TraesCS5B01G468600 chr6D 91.398 93 8 0 176 268 37446733 37446641 6.590000e-26 128.0
82 TraesCS5B01G468600 chr6D 91.011 89 8 0 176 264 157650740 157650652 1.100000e-23 121.0
83 TraesCS5B01G468600 chr6D 91.566 83 7 0 176 258 21623485 21623567 5.130000e-22 115.0
84 TraesCS5B01G468600 chr6D 90.698 86 8 0 176 261 454275036 454275121 5.130000e-22 115.0
85 TraesCS5B01G468600 chr3A 76.892 251 54 4 266 514 727659756 727660004 3.040000e-29 139.0
86 TraesCS5B01G468600 chrUn 94.118 85 5 0 176 260 86263709 86263793 1.830000e-26 130.0
87 TraesCS5B01G468600 chrUn 90.698 86 8 0 176 261 10364514 10364429 5.130000e-22 115.0
88 TraesCS5B01G468600 chrUn 90.698 86 8 0 176 261 222287984 222287899 5.130000e-22 115.0
89 TraesCS5B01G468600 chrUn 90.698 86 8 0 176 261 239188519 239188604 5.130000e-22 115.0
90 TraesCS5B01G468600 chrUn 96.491 57 2 0 205 261 101767546 101767490 6.680000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G468600 chr5B 642052246 642054518 2272 True 4198 4198 100.000 1 2273 1 chr5B.!!$R1 2272
1 TraesCS5B01G468600 chr5B 590498724 590499330 606 False 961 961 95.395 1673 2273 1 chr5B.!!$F4 600
2 TraesCS5B01G468600 chr5B 42267230 42267828 598 False 948 948 95.326 1679 2273 1 chr5B.!!$F1 594
3 TraesCS5B01G468600 chr5B 659964158 659964762 604 True 935 935 94.728 1673 2271 1 chr5B.!!$R2 598
4 TraesCS5B01G468600 chr2A 750367746 750368767 1021 False 1387 1387 91.049 260 1298 1 chr2A.!!$F1 1038
5 TraesCS5B01G468600 chr3B 674433682 674434714 1032 True 1210 1210 87.850 266 1299 1 chr3B.!!$R2 1033
6 TraesCS5B01G468600 chr3B 636870403 636871440 1037 False 1127 1127 86.290 260 1299 1 chr3B.!!$F2 1039
7 TraesCS5B01G468600 chr3B 826316118 826316711 593 False 929 929 94.816 1673 2270 1 chr3B.!!$F3 597
8 TraesCS5B01G468600 chr6A 463580557 463581601 1044 False 1205 1205 87.512 254 1298 1 chr6A.!!$F1 1044
9 TraesCS5B01G468600 chr7B 547442823 547443416 593 True 965 965 96.128 1673 2261 1 chr7B.!!$R1 588
10 TraesCS5B01G468600 chr7B 547502327 547502925 598 True 942 942 95.326 1673 2261 1 chr7B.!!$R2 588
11 TraesCS5B01G468600 chr4A 666371272 666371870 598 False 937 937 94.859 1672 2273 1 chr4A.!!$F2 601
12 TraesCS5B01G468600 chr4A 656711407 656712016 609 False 928 928 94.290 1669 2273 1 chr4A.!!$F1 604
13 TraesCS5B01G468600 chr2B 210004820 210005416 596 True 933 933 94.842 1673 2272 1 chr2B.!!$R2 599
14 TraesCS5B01G468600 chr7A 89900115 89901153 1038 False 850 850 81.513 260 1299 1 chr7A.!!$F1 1039

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
137 138 0.17691 AAAACAAACAAGGTGCCCGG 59.823 50.0 0.0 0.0 0.0 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1538 1540 0.029567 GCTACCCTGACTCGACATCG 59.97 60.0 0.0 0.0 41.45 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.866651 CAAGTCTTGCATGCCTAGTAGT 58.133 45.455 16.68 3.62 0.00 2.73
26 27 4.256920 CAAGTCTTGCATGCCTAGTAGTT 58.743 43.478 16.68 8.80 0.00 2.24
27 28 5.419542 CAAGTCTTGCATGCCTAGTAGTTA 58.580 41.667 16.68 0.00 0.00 2.24
28 29 5.677319 AGTCTTGCATGCCTAGTAGTTAA 57.323 39.130 16.68 0.00 0.00 2.01
29 30 6.049955 AGTCTTGCATGCCTAGTAGTTAAA 57.950 37.500 16.68 0.00 0.00 1.52
30 31 6.472887 AGTCTTGCATGCCTAGTAGTTAAAA 58.527 36.000 16.68 0.00 0.00 1.52
31 32 6.940298 AGTCTTGCATGCCTAGTAGTTAAAAA 59.060 34.615 16.68 0.00 0.00 1.94
32 33 7.611855 AGTCTTGCATGCCTAGTAGTTAAAAAT 59.388 33.333 16.68 0.00 0.00 1.82
33 34 7.698130 GTCTTGCATGCCTAGTAGTTAAAAATG 59.302 37.037 16.68 0.00 0.00 2.32
34 35 6.449635 TGCATGCCTAGTAGTTAAAAATGG 57.550 37.500 16.68 0.00 0.00 3.16
35 36 6.184068 TGCATGCCTAGTAGTTAAAAATGGA 58.816 36.000 16.68 0.00 0.00 3.41
36 37 6.661377 TGCATGCCTAGTAGTTAAAAATGGAA 59.339 34.615 16.68 0.00 0.00 3.53
37 38 7.177568 TGCATGCCTAGTAGTTAAAAATGGAAA 59.822 33.333 16.68 0.00 0.00 3.13
38 39 7.488150 GCATGCCTAGTAGTTAAAAATGGAAAC 59.512 37.037 6.36 0.00 0.00 2.78
54 55 5.798125 TGGAAACAAAATGTAAGCATGGA 57.202 34.783 0.00 0.00 37.44 3.41
55 56 6.166984 TGGAAACAAAATGTAAGCATGGAA 57.833 33.333 0.00 0.00 37.44 3.53
56 57 6.586344 TGGAAACAAAATGTAAGCATGGAAA 58.414 32.000 0.00 0.00 37.44 3.13
57 58 7.050377 TGGAAACAAAATGTAAGCATGGAAAA 58.950 30.769 0.00 0.00 37.44 2.29
58 59 7.011857 TGGAAACAAAATGTAAGCATGGAAAAC 59.988 33.333 0.00 0.00 37.44 2.43
59 60 6.859420 AACAAAATGTAAGCATGGAAAACC 57.141 33.333 0.00 0.00 35.15 3.27
60 61 6.173427 ACAAAATGTAAGCATGGAAAACCT 57.827 33.333 0.00 0.00 35.15 3.50
61 62 6.591001 ACAAAATGTAAGCATGGAAAACCTT 58.409 32.000 0.00 0.00 35.15 3.50
62 63 6.482973 ACAAAATGTAAGCATGGAAAACCTTG 59.517 34.615 0.00 0.00 35.15 3.61
63 64 3.658757 TGTAAGCATGGAAAACCTTGC 57.341 42.857 15.89 15.89 39.93 4.01
64 65 2.961741 TGTAAGCATGGAAAACCTTGCA 59.038 40.909 22.38 6.51 41.39 4.08
65 66 3.577848 TGTAAGCATGGAAAACCTTGCAT 59.422 39.130 22.38 15.95 43.72 3.96
74 75 7.910441 ATGGAAAACCTTGCATGAAAAATAG 57.090 32.000 0.00 0.00 41.58 1.73
75 76 7.060383 TGGAAAACCTTGCATGAAAAATAGA 57.940 32.000 0.00 0.00 0.00 1.98
76 77 7.678837 TGGAAAACCTTGCATGAAAAATAGAT 58.321 30.769 0.00 0.00 0.00 1.98
77 78 8.811017 TGGAAAACCTTGCATGAAAAATAGATA 58.189 29.630 0.00 0.00 0.00 1.98
78 79 9.305925 GGAAAACCTTGCATGAAAAATAGATAG 57.694 33.333 0.00 0.00 0.00 2.08
79 80 9.305925 GAAAACCTTGCATGAAAAATAGATAGG 57.694 33.333 0.00 0.00 0.00 2.57
80 81 8.593945 AAACCTTGCATGAAAAATAGATAGGA 57.406 30.769 0.00 0.00 0.00 2.94
81 82 8.593945 AACCTTGCATGAAAAATAGATAGGAA 57.406 30.769 0.00 0.00 0.00 3.36
82 83 8.593945 ACCTTGCATGAAAAATAGATAGGAAA 57.406 30.769 0.00 0.00 0.00 3.13
83 84 8.689972 ACCTTGCATGAAAAATAGATAGGAAAG 58.310 33.333 0.00 0.00 0.00 2.62
84 85 8.906867 CCTTGCATGAAAAATAGATAGGAAAGA 58.093 33.333 0.00 0.00 0.00 2.52
102 103 8.597662 AGGAAAGAAATCAAACAATCATTGTG 57.402 30.769 3.07 0.00 44.59 3.33
103 104 7.172019 AGGAAAGAAATCAAACAATCATTGTGC 59.828 33.333 3.07 0.00 44.59 4.57
104 105 7.041916 GGAAAGAAATCAAACAATCATTGTGCA 60.042 33.333 3.07 0.00 44.59 4.57
105 106 7.416154 AAGAAATCAAACAATCATTGTGCAG 57.584 32.000 3.07 0.00 44.59 4.41
106 107 5.407387 AGAAATCAAACAATCATTGTGCAGC 59.593 36.000 3.07 0.00 44.59 5.25
107 108 2.663808 TCAAACAATCATTGTGCAGCG 58.336 42.857 3.07 0.00 44.59 5.18
108 109 2.292845 TCAAACAATCATTGTGCAGCGA 59.707 40.909 3.07 0.00 44.59 4.93
109 110 3.057386 TCAAACAATCATTGTGCAGCGAT 60.057 39.130 3.07 0.00 44.59 4.58
110 111 4.155644 TCAAACAATCATTGTGCAGCGATA 59.844 37.500 3.07 0.00 44.59 2.92
111 112 3.680642 ACAATCATTGTGCAGCGATAC 57.319 42.857 0.98 0.00 43.48 2.24
112 113 3.273434 ACAATCATTGTGCAGCGATACT 58.727 40.909 0.98 0.00 43.48 2.12
113 114 3.691118 ACAATCATTGTGCAGCGATACTT 59.309 39.130 0.98 0.00 43.48 2.24
114 115 4.875536 ACAATCATTGTGCAGCGATACTTA 59.124 37.500 0.98 0.00 43.48 2.24
115 116 5.200454 CAATCATTGTGCAGCGATACTTAC 58.800 41.667 0.00 0.00 0.00 2.34
116 117 3.194861 TCATTGTGCAGCGATACTTACC 58.805 45.455 0.00 0.00 0.00 2.85
117 118 3.118775 TCATTGTGCAGCGATACTTACCT 60.119 43.478 0.00 0.00 0.00 3.08
118 119 4.098807 TCATTGTGCAGCGATACTTACCTA 59.901 41.667 0.00 0.00 0.00 3.08
119 120 4.459390 TTGTGCAGCGATACTTACCTAA 57.541 40.909 0.00 0.00 0.00 2.69
120 121 4.459390 TGTGCAGCGATACTTACCTAAA 57.541 40.909 0.00 0.00 0.00 1.85
121 122 4.823157 TGTGCAGCGATACTTACCTAAAA 58.177 39.130 0.00 0.00 0.00 1.52
122 123 4.628333 TGTGCAGCGATACTTACCTAAAAC 59.372 41.667 0.00 0.00 0.00 2.43
123 124 4.628333 GTGCAGCGATACTTACCTAAAACA 59.372 41.667 0.00 0.00 0.00 2.83
124 125 5.121142 GTGCAGCGATACTTACCTAAAACAA 59.879 40.000 0.00 0.00 0.00 2.83
125 126 5.701750 TGCAGCGATACTTACCTAAAACAAA 59.298 36.000 0.00 0.00 0.00 2.83
126 127 6.019762 GCAGCGATACTTACCTAAAACAAAC 58.980 40.000 0.00 0.00 0.00 2.93
127 128 6.347888 GCAGCGATACTTACCTAAAACAAACA 60.348 38.462 0.00 0.00 0.00 2.83
128 129 7.577979 CAGCGATACTTACCTAAAACAAACAA 58.422 34.615 0.00 0.00 0.00 2.83
129 130 7.744715 CAGCGATACTTACCTAAAACAAACAAG 59.255 37.037 0.00 0.00 0.00 3.16
130 131 7.019418 GCGATACTTACCTAAAACAAACAAGG 58.981 38.462 0.00 0.00 35.14 3.61
131 132 7.308169 GCGATACTTACCTAAAACAAACAAGGT 60.308 37.037 0.00 0.00 44.47 3.50
132 133 8.013378 CGATACTTACCTAAAACAAACAAGGTG 58.987 37.037 3.16 0.00 42.31 4.00
133 134 5.898174 ACTTACCTAAAACAAACAAGGTGC 58.102 37.500 3.16 0.00 42.31 5.01
134 135 3.812156 ACCTAAAACAAACAAGGTGCC 57.188 42.857 0.00 0.00 40.83 5.01
135 136 2.432874 ACCTAAAACAAACAAGGTGCCC 59.567 45.455 0.00 0.00 40.83 5.36
136 137 2.544903 CCTAAAACAAACAAGGTGCCCG 60.545 50.000 0.00 0.00 0.00 6.13
137 138 0.176910 AAAACAAACAAGGTGCCCGG 59.823 50.000 0.00 0.00 0.00 5.73
138 139 1.681486 AAACAAACAAGGTGCCCGGG 61.681 55.000 19.09 19.09 0.00 5.73
139 140 3.989787 CAAACAAGGTGCCCGGGC 61.990 66.667 39.40 39.40 42.35 6.13
154 155 3.741325 GGCACCTAGGTGTCCCAT 58.259 61.111 36.31 1.55 44.18 4.00
155 156 1.527370 GGCACCTAGGTGTCCCATC 59.473 63.158 36.31 21.60 44.18 3.51
156 157 0.983378 GGCACCTAGGTGTCCCATCT 60.983 60.000 36.31 0.00 44.18 2.90
157 158 1.691482 GGCACCTAGGTGTCCCATCTA 60.691 57.143 36.31 0.00 44.18 1.98
158 159 2.330216 GCACCTAGGTGTCCCATCTAT 58.670 52.381 36.31 0.00 46.90 1.98
159 160 2.706190 GCACCTAGGTGTCCCATCTATT 59.294 50.000 36.31 0.00 46.90 1.73
160 161 3.136626 GCACCTAGGTGTCCCATCTATTT 59.863 47.826 36.31 0.00 46.90 1.40
161 162 4.385310 GCACCTAGGTGTCCCATCTATTTT 60.385 45.833 36.31 0.00 46.90 1.82
162 163 5.163237 GCACCTAGGTGTCCCATCTATTTTA 60.163 44.000 36.31 0.00 46.90 1.52
163 164 6.289064 CACCTAGGTGTCCCATCTATTTTAC 58.711 44.000 30.57 0.00 40.91 2.01
164 165 5.968167 ACCTAGGTGTCCCATCTATTTTACA 59.032 40.000 15.42 0.00 0.00 2.41
165 166 6.619852 ACCTAGGTGTCCCATCTATTTTACAT 59.380 38.462 15.42 0.00 0.00 2.29
166 167 7.792736 ACCTAGGTGTCCCATCTATTTTACATA 59.207 37.037 15.42 0.00 0.00 2.29
167 168 8.826765 CCTAGGTGTCCCATCTATTTTACATAT 58.173 37.037 0.00 0.00 0.00 1.78
210 211 8.997621 TGAGTACAATAATCAACTTGGAGTAC 57.002 34.615 0.00 0.00 28.82 2.73
211 212 8.590204 TGAGTACAATAATCAACTTGGAGTACA 58.410 33.333 0.00 0.00 33.62 2.90
212 213 9.431887 GAGTACAATAATCAACTTGGAGTACAA 57.568 33.333 0.00 0.00 37.55 2.41
222 223 2.839486 TGGAGTACAAGACAAGGCAG 57.161 50.000 0.00 0.00 0.00 4.85
223 224 1.347707 TGGAGTACAAGACAAGGCAGG 59.652 52.381 0.00 0.00 0.00 4.85
224 225 1.623811 GGAGTACAAGACAAGGCAGGA 59.376 52.381 0.00 0.00 0.00 3.86
225 226 2.038557 GGAGTACAAGACAAGGCAGGAA 59.961 50.000 0.00 0.00 0.00 3.36
226 227 3.067833 GAGTACAAGACAAGGCAGGAAC 58.932 50.000 0.00 0.00 0.00 3.62
227 228 2.438021 AGTACAAGACAAGGCAGGAACA 59.562 45.455 0.00 0.00 0.00 3.18
228 229 2.435372 ACAAGACAAGGCAGGAACAA 57.565 45.000 0.00 0.00 0.00 2.83
229 230 2.733956 ACAAGACAAGGCAGGAACAAA 58.266 42.857 0.00 0.00 0.00 2.83
230 231 3.299503 ACAAGACAAGGCAGGAACAAAT 58.700 40.909 0.00 0.00 0.00 2.32
231 232 3.319122 ACAAGACAAGGCAGGAACAAATC 59.681 43.478 0.00 0.00 0.00 2.17
379 380 0.454196 GTTTTGGTGGCGAGTGTTGT 59.546 50.000 0.00 0.00 0.00 3.32
383 384 1.069090 GGTGGCGAGTGTTGTGAGA 59.931 57.895 0.00 0.00 0.00 3.27
429 430 6.072783 TGCTCAAATATCATCACGTTTCAACA 60.073 34.615 0.00 0.00 0.00 3.33
478 479 5.814783 ACGCTGAAGAAGATTTAATGCATC 58.185 37.500 0.00 0.00 0.00 3.91
615 616 5.243954 TCCTCGTTTCTCTGATTCTGAAAGA 59.756 40.000 0.00 0.00 44.68 2.52
651 652 1.878211 TCATGTGGGCTATCTGGACA 58.122 50.000 0.00 0.00 0.00 4.02
652 653 1.486310 TCATGTGGGCTATCTGGACAC 59.514 52.381 0.00 0.00 0.00 3.67
655 656 2.063979 TGGGCTATCTGGACACCCG 61.064 63.158 0.00 0.00 44.00 5.28
657 658 2.064581 GGCTATCTGGACACCCGGT 61.065 63.158 0.00 0.00 39.88 5.28
693 694 5.304101 ACATGATAAAGAAGCAACAAACCCA 59.696 36.000 0.00 0.00 0.00 4.51
724 725 4.624452 CGATGATTATGACTCGTGATGCAT 59.376 41.667 0.00 0.00 0.00 3.96
736 737 1.588139 GATGCATTGGCGCTGCTTC 60.588 57.895 19.22 17.78 45.35 3.86
741 742 1.665161 GCATTGGCGCTGCTTCATATC 60.665 52.381 12.41 0.00 36.68 1.63
765 766 1.086634 GTGAGCATGCTCGGGTTCTC 61.087 60.000 35.68 16.33 45.48 2.87
766 767 1.260538 TGAGCATGCTCGGGTTCTCT 61.261 55.000 35.68 5.82 45.48 3.10
824 825 3.742369 GTGAAGATAAACACCGACGGAAA 59.258 43.478 23.38 0.67 0.00 3.13
971 973 6.128391 GCTGTACGAGATGGTGTTATTTTTGA 60.128 38.462 0.00 0.00 0.00 2.69
977 979 6.089417 CGAGATGGTGTTATTTTTGAAAAGCC 59.911 38.462 0.00 0.00 0.00 4.35
1070 1072 3.695606 ACGATCAGTGGTGGCGCT 61.696 61.111 7.64 0.00 0.00 5.92
1117 1119 7.765819 AGCATGCTTGTTCTTTTACTTCTTTTT 59.234 29.630 16.30 0.00 0.00 1.94
1217 1219 2.507452 CTGGATGGGCTCGATGCA 59.493 61.111 8.71 0.00 45.15 3.96
1262 1264 2.687842 CAGATTCTGCCGAGGCTTC 58.312 57.895 15.75 7.15 42.51 3.86
1274 1276 3.181506 GCCGAGGCTTCTGTTGAATAAAG 60.182 47.826 6.90 0.00 38.26 1.85
1288 1290 7.125391 TGTTGAATAAAGCTCCCCATATTTCT 58.875 34.615 0.00 0.00 0.00 2.52
1317 1319 4.853924 AAATCACAACACTCAACATCCC 57.146 40.909 0.00 0.00 0.00 3.85
1318 1320 2.270352 TCACAACACTCAACATCCCC 57.730 50.000 0.00 0.00 0.00 4.81
1319 1321 1.202879 TCACAACACTCAACATCCCCC 60.203 52.381 0.00 0.00 0.00 5.40
1320 1322 0.250727 ACAACACTCAACATCCCCCG 60.251 55.000 0.00 0.00 0.00 5.73
1321 1323 1.303317 AACACTCAACATCCCCCGC 60.303 57.895 0.00 0.00 0.00 6.13
1322 1324 2.063015 AACACTCAACATCCCCCGCA 62.063 55.000 0.00 0.00 0.00 5.69
1323 1325 1.746615 CACTCAACATCCCCCGCAG 60.747 63.158 0.00 0.00 0.00 5.18
1324 1326 2.224159 ACTCAACATCCCCCGCAGT 61.224 57.895 0.00 0.00 0.00 4.40
1325 1327 1.450312 CTCAACATCCCCCGCAGTC 60.450 63.158 0.00 0.00 0.00 3.51
1326 1328 2.184020 CTCAACATCCCCCGCAGTCA 62.184 60.000 0.00 0.00 0.00 3.41
1327 1329 2.040544 CAACATCCCCCGCAGTCAC 61.041 63.158 0.00 0.00 0.00 3.67
1328 1330 2.525124 AACATCCCCCGCAGTCACA 61.525 57.895 0.00 0.00 0.00 3.58
1329 1331 2.063015 AACATCCCCCGCAGTCACAA 62.063 55.000 0.00 0.00 0.00 3.33
1330 1332 1.077501 CATCCCCCGCAGTCACAAT 60.078 57.895 0.00 0.00 0.00 2.71
1331 1333 1.077501 ATCCCCCGCAGTCACAATG 60.078 57.895 0.00 0.00 0.00 2.82
1332 1334 2.556840 ATCCCCCGCAGTCACAATGG 62.557 60.000 0.00 0.00 0.00 3.16
1333 1335 2.034066 CCCCGCAGTCACAATGGT 59.966 61.111 0.00 0.00 0.00 3.55
1334 1336 1.298340 CCCCGCAGTCACAATGGTA 59.702 57.895 0.00 0.00 0.00 3.25
1335 1337 0.744414 CCCCGCAGTCACAATGGTAG 60.744 60.000 0.00 0.00 0.00 3.18
1336 1338 1.369091 CCCGCAGTCACAATGGTAGC 61.369 60.000 0.00 0.00 0.00 3.58
1337 1339 1.695893 CCGCAGTCACAATGGTAGCG 61.696 60.000 0.00 0.00 42.93 4.26
1338 1340 0.735978 CGCAGTCACAATGGTAGCGA 60.736 55.000 0.00 0.00 45.78 4.93
1339 1341 1.002366 GCAGTCACAATGGTAGCGAG 58.998 55.000 0.00 0.00 0.00 5.03
1340 1342 1.645034 CAGTCACAATGGTAGCGAGG 58.355 55.000 0.00 0.00 0.00 4.63
1341 1343 0.108138 AGTCACAATGGTAGCGAGGC 60.108 55.000 0.00 0.00 0.00 4.70
1342 1344 1.153647 TCACAATGGTAGCGAGGCG 60.154 57.895 0.00 0.00 0.00 5.52
1343 1345 2.173669 CACAATGGTAGCGAGGCGG 61.174 63.158 0.00 0.00 0.00 6.13
1344 1346 2.588877 CAATGGTAGCGAGGCGGG 60.589 66.667 0.00 0.00 0.00 6.13
1345 1347 3.081409 AATGGTAGCGAGGCGGGT 61.081 61.111 0.00 0.00 0.00 5.28
1346 1348 3.385749 AATGGTAGCGAGGCGGGTG 62.386 63.158 0.00 0.00 0.00 4.61
1349 1351 4.814294 GTAGCGAGGCGGGTGGTG 62.814 72.222 0.00 0.00 0.00 4.17
1353 1355 4.436998 CGAGGCGGGTGGTGAGAC 62.437 72.222 0.00 0.00 0.00 3.36
1354 1356 4.083862 GAGGCGGGTGGTGAGACC 62.084 72.222 0.00 0.00 39.22 3.85
1358 1360 3.760035 CGGGTGGTGAGACCGGAG 61.760 72.222 9.46 0.00 42.58 4.63
1359 1361 2.283676 GGGTGGTGAGACCGGAGA 60.284 66.667 9.46 0.00 42.58 3.71
1360 1362 1.911766 GGGTGGTGAGACCGGAGAA 60.912 63.158 9.46 0.00 42.58 2.87
1361 1363 1.592223 GGTGGTGAGACCGGAGAAG 59.408 63.158 9.46 0.00 42.58 2.85
1362 1364 0.898789 GGTGGTGAGACCGGAGAAGA 60.899 60.000 9.46 0.00 42.58 2.87
1363 1365 0.966920 GTGGTGAGACCGGAGAAGAA 59.033 55.000 9.46 0.00 42.58 2.52
1364 1366 1.550976 GTGGTGAGACCGGAGAAGAAT 59.449 52.381 9.46 0.00 42.58 2.40
1365 1367 1.825474 TGGTGAGACCGGAGAAGAATC 59.175 52.381 9.46 0.00 42.58 2.52
1366 1368 1.137282 GGTGAGACCGGAGAAGAATCC 59.863 57.143 9.46 0.00 35.88 3.01
1383 1385 2.879907 CGAAGGTAAGCCGACGGA 59.120 61.111 20.50 0.00 40.50 4.69
1384 1386 1.515736 CGAAGGTAAGCCGACGGAC 60.516 63.158 20.50 9.27 40.50 4.79
1385 1387 1.588082 GAAGGTAAGCCGACGGACA 59.412 57.895 20.50 0.00 40.50 4.02
1386 1388 0.037975 GAAGGTAAGCCGACGGACAA 60.038 55.000 20.50 0.00 40.50 3.18
1387 1389 0.393820 AAGGTAAGCCGACGGACAAA 59.606 50.000 20.50 0.00 40.50 2.83
1388 1390 0.320160 AGGTAAGCCGACGGACAAAC 60.320 55.000 20.50 9.21 40.50 2.93
1389 1391 1.293963 GGTAAGCCGACGGACAAACC 61.294 60.000 20.50 14.60 0.00 3.27
1390 1392 1.004679 TAAGCCGACGGACAAACCC 60.005 57.895 20.50 0.00 34.64 4.11
1391 1393 2.453379 TAAGCCGACGGACAAACCCC 62.453 60.000 20.50 0.00 34.64 4.95
1409 1411 3.669939 CCCCCACATTCATAAGGAAGT 57.330 47.619 0.00 0.00 39.30 3.01
1410 1412 3.981212 CCCCCACATTCATAAGGAAGTT 58.019 45.455 0.00 0.00 39.30 2.66
1411 1413 3.701040 CCCCCACATTCATAAGGAAGTTG 59.299 47.826 0.00 0.00 39.30 3.16
1412 1414 4.344104 CCCCACATTCATAAGGAAGTTGT 58.656 43.478 0.00 0.00 39.30 3.32
1413 1415 4.158394 CCCCACATTCATAAGGAAGTTGTG 59.842 45.833 0.00 0.00 42.31 3.33
1415 1417 4.737054 CACATTCATAAGGAAGTTGTGGC 58.263 43.478 0.00 0.00 40.43 5.01
1416 1418 4.460382 CACATTCATAAGGAAGTTGTGGCT 59.540 41.667 0.00 0.00 40.43 4.75
1417 1419 5.647658 CACATTCATAAGGAAGTTGTGGCTA 59.352 40.000 0.00 0.00 40.43 3.93
1418 1420 5.882557 ACATTCATAAGGAAGTTGTGGCTAG 59.117 40.000 0.00 0.00 39.30 3.42
1419 1421 5.755409 TTCATAAGGAAGTTGTGGCTAGA 57.245 39.130 0.00 0.00 0.00 2.43
1420 1422 5.344743 TCATAAGGAAGTTGTGGCTAGAG 57.655 43.478 0.00 0.00 0.00 2.43
1421 1423 4.777896 TCATAAGGAAGTTGTGGCTAGAGT 59.222 41.667 0.00 0.00 0.00 3.24
1422 1424 3.409026 AAGGAAGTTGTGGCTAGAGTG 57.591 47.619 0.00 0.00 0.00 3.51
1423 1425 1.625818 AGGAAGTTGTGGCTAGAGTGG 59.374 52.381 0.00 0.00 0.00 4.00
1424 1426 1.623811 GGAAGTTGTGGCTAGAGTGGA 59.376 52.381 0.00 0.00 0.00 4.02
1425 1427 2.038557 GGAAGTTGTGGCTAGAGTGGAA 59.961 50.000 0.00 0.00 0.00 3.53
1426 1428 3.496160 GGAAGTTGTGGCTAGAGTGGAAA 60.496 47.826 0.00 0.00 0.00 3.13
1427 1429 3.127425 AGTTGTGGCTAGAGTGGAAAC 57.873 47.619 0.00 0.00 0.00 2.78
1428 1430 2.152016 GTTGTGGCTAGAGTGGAAACC 58.848 52.381 0.00 0.00 0.00 3.27
1429 1431 0.320374 TGTGGCTAGAGTGGAAACCG 59.680 55.000 0.00 0.00 0.00 4.44
1430 1432 0.606604 GTGGCTAGAGTGGAAACCGA 59.393 55.000 0.00 0.00 0.00 4.69
1431 1433 0.606604 TGGCTAGAGTGGAAACCGAC 59.393 55.000 0.00 0.00 0.00 4.79
1432 1434 0.458025 GGCTAGAGTGGAAACCGACG 60.458 60.000 0.00 0.00 0.00 5.12
1433 1435 0.524862 GCTAGAGTGGAAACCGACGA 59.475 55.000 0.00 0.00 0.00 4.20
1434 1436 1.467713 GCTAGAGTGGAAACCGACGAG 60.468 57.143 0.00 0.00 0.00 4.18
1444 1446 3.862124 CCGACGAGGTTGCTCAAG 58.138 61.111 0.00 0.00 34.51 3.02
1445 1447 2.383527 CCGACGAGGTTGCTCAAGC 61.384 63.158 0.00 3.81 38.96 4.01
1455 1457 3.490890 GCTCAAGCAAGGCGGTAG 58.509 61.111 0.00 0.00 41.59 3.18
1456 1458 2.754995 GCTCAAGCAAGGCGGTAGC 61.755 63.158 0.00 0.00 41.59 3.58
1457 1459 1.078848 CTCAAGCAAGGCGGTAGCT 60.079 57.895 0.00 0.00 44.37 3.32
1458 1460 1.079127 TCAAGCAAGGCGGTAGCTC 60.079 57.895 0.00 0.00 44.37 4.09
1459 1461 1.078848 CAAGCAAGGCGGTAGCTCT 60.079 57.895 0.00 0.00 44.37 4.09
1460 1462 0.674895 CAAGCAAGGCGGTAGCTCTT 60.675 55.000 0.00 0.00 44.37 2.85
1461 1463 0.036875 AAGCAAGGCGGTAGCTCTTT 59.963 50.000 0.00 0.00 44.37 2.52
1462 1464 0.902531 AGCAAGGCGGTAGCTCTTTA 59.097 50.000 0.00 0.00 44.37 1.85
1463 1465 1.486726 AGCAAGGCGGTAGCTCTTTAT 59.513 47.619 0.00 0.00 44.37 1.40
1464 1466 1.599542 GCAAGGCGGTAGCTCTTTATG 59.400 52.381 0.00 0.00 44.37 1.90
1465 1467 1.599542 CAAGGCGGTAGCTCTTTATGC 59.400 52.381 0.00 0.00 44.37 3.14
1466 1468 0.106894 AGGCGGTAGCTCTTTATGCC 59.893 55.000 0.00 0.00 44.37 4.40
1467 1469 0.179056 GGCGGTAGCTCTTTATGCCA 60.179 55.000 0.00 0.00 44.37 4.92
1468 1470 1.543429 GGCGGTAGCTCTTTATGCCAT 60.543 52.381 0.00 0.00 44.37 4.40
1469 1471 2.222027 GCGGTAGCTCTTTATGCCATT 58.778 47.619 0.00 0.00 41.01 3.16
1470 1472 2.031682 GCGGTAGCTCTTTATGCCATTG 60.032 50.000 0.00 0.00 41.01 2.82
1471 1473 3.206150 CGGTAGCTCTTTATGCCATTGT 58.794 45.455 0.00 0.00 0.00 2.71
1472 1474 3.248602 CGGTAGCTCTTTATGCCATTGTC 59.751 47.826 0.00 0.00 0.00 3.18
1473 1475 3.248602 GGTAGCTCTTTATGCCATTGTCG 59.751 47.826 0.00 0.00 0.00 4.35
1474 1476 3.266510 AGCTCTTTATGCCATTGTCGA 57.733 42.857 0.00 0.00 0.00 4.20
1475 1477 3.201290 AGCTCTTTATGCCATTGTCGAG 58.799 45.455 0.00 0.00 0.00 4.04
1476 1478 2.289002 GCTCTTTATGCCATTGTCGAGG 59.711 50.000 0.00 0.00 0.00 4.63
1477 1479 3.535561 CTCTTTATGCCATTGTCGAGGT 58.464 45.455 0.00 0.00 0.00 3.85
1478 1480 4.693283 CTCTTTATGCCATTGTCGAGGTA 58.307 43.478 0.00 0.00 0.00 3.08
1479 1481 4.693283 TCTTTATGCCATTGTCGAGGTAG 58.307 43.478 0.00 0.00 0.00 3.18
1480 1482 2.526304 TATGCCATTGTCGAGGTAGC 57.474 50.000 0.00 0.00 0.00 3.58
1481 1483 0.179045 ATGCCATTGTCGAGGTAGCC 60.179 55.000 0.00 0.00 0.00 3.93
1482 1484 1.220749 GCCATTGTCGAGGTAGCCA 59.779 57.895 0.00 0.00 0.00 4.75
1483 1485 0.392461 GCCATTGTCGAGGTAGCCAA 60.392 55.000 0.00 0.00 0.00 4.52
1484 1486 1.656652 CCATTGTCGAGGTAGCCAAG 58.343 55.000 0.00 0.00 0.00 3.61
1485 1487 1.207089 CCATTGTCGAGGTAGCCAAGA 59.793 52.381 0.00 0.00 0.00 3.02
1486 1488 2.544685 CATTGTCGAGGTAGCCAAGAG 58.455 52.381 0.00 0.00 0.00 2.85
1487 1489 0.246635 TTGTCGAGGTAGCCAAGAGC 59.753 55.000 0.00 0.00 44.25 4.09
1497 1499 3.577389 GCCAAGAGCATAGGGTTGT 57.423 52.632 0.00 0.00 42.97 3.32
1498 1500 1.098050 GCCAAGAGCATAGGGTTGTG 58.902 55.000 0.00 0.00 42.97 3.33
1499 1501 1.614317 GCCAAGAGCATAGGGTTGTGT 60.614 52.381 0.00 0.00 42.97 3.72
1500 1502 2.355716 GCCAAGAGCATAGGGTTGTGTA 60.356 50.000 0.00 0.00 42.97 2.90
1501 1503 3.535561 CCAAGAGCATAGGGTTGTGTAG 58.464 50.000 0.00 0.00 0.00 2.74
1502 1504 2.939103 CAAGAGCATAGGGTTGTGTAGC 59.061 50.000 0.00 0.00 0.00 3.58
1503 1505 1.486726 AGAGCATAGGGTTGTGTAGCC 59.513 52.381 0.00 0.00 45.13 3.93
1508 1510 2.428622 GGGTTGTGTAGCCGTGGT 59.571 61.111 0.00 0.00 34.09 4.16
1509 1511 1.670083 GGGTTGTGTAGCCGTGGTC 60.670 63.158 0.00 0.00 34.09 4.02
1510 1512 2.025418 GGTTGTGTAGCCGTGGTCG 61.025 63.158 0.00 0.00 0.00 4.79
1511 1513 1.007038 GTTGTGTAGCCGTGGTCGA 60.007 57.895 0.00 0.00 39.71 4.20
1512 1514 1.007336 GTTGTGTAGCCGTGGTCGAG 61.007 60.000 0.00 0.00 39.71 4.04
1513 1515 2.149803 TTGTGTAGCCGTGGTCGAGG 62.150 60.000 0.00 0.00 39.71 4.63
1514 1516 2.282674 TGTAGCCGTGGTCGAGGT 60.283 61.111 0.00 0.00 39.71 3.85
1515 1517 1.002257 TGTAGCCGTGGTCGAGGTA 60.002 57.895 0.00 0.00 39.71 3.08
1516 1518 1.028330 TGTAGCCGTGGTCGAGGTAG 61.028 60.000 0.00 0.00 39.71 3.18
1517 1519 2.117156 TAGCCGTGGTCGAGGTAGC 61.117 63.158 0.00 0.00 39.71 3.58
1518 1520 4.509737 GCCGTGGTCGAGGTAGCC 62.510 72.222 0.00 0.00 39.71 3.93
1519 1521 3.066190 CCGTGGTCGAGGTAGCCA 61.066 66.667 0.00 0.00 39.71 4.75
1520 1522 2.423898 CCGTGGTCGAGGTAGCCAT 61.424 63.158 0.00 0.00 39.71 4.40
1521 1523 1.226974 CGTGGTCGAGGTAGCCATG 60.227 63.158 0.00 0.00 39.71 3.66
1522 1524 1.144057 GTGGTCGAGGTAGCCATGG 59.856 63.158 7.63 7.63 34.52 3.66
1523 1525 1.001120 TGGTCGAGGTAGCCATGGA 59.999 57.895 18.40 0.00 0.00 3.41
1524 1526 0.616395 TGGTCGAGGTAGCCATGGAA 60.616 55.000 18.40 0.00 0.00 3.53
1525 1527 0.539986 GGTCGAGGTAGCCATGGAAA 59.460 55.000 18.40 0.00 0.00 3.13
1526 1528 1.473434 GGTCGAGGTAGCCATGGAAAG 60.473 57.143 18.40 0.00 0.00 2.62
1527 1529 1.480954 GTCGAGGTAGCCATGGAAAGA 59.519 52.381 18.40 1.05 0.00 2.52
1528 1530 2.093658 GTCGAGGTAGCCATGGAAAGAA 60.094 50.000 18.40 0.00 0.00 2.52
1529 1531 2.771943 TCGAGGTAGCCATGGAAAGAAT 59.228 45.455 18.40 0.00 0.00 2.40
1530 1532 2.874701 CGAGGTAGCCATGGAAAGAATG 59.125 50.000 18.40 0.00 0.00 2.67
1531 1533 2.620585 GAGGTAGCCATGGAAAGAATGC 59.379 50.000 18.40 0.00 0.00 3.56
1532 1534 2.025037 AGGTAGCCATGGAAAGAATGCA 60.025 45.455 18.40 0.00 0.00 3.96
1533 1535 2.961062 GGTAGCCATGGAAAGAATGCAT 59.039 45.455 18.40 0.00 41.32 3.96
1534 1536 3.385755 GGTAGCCATGGAAAGAATGCATT 59.614 43.478 18.40 12.83 38.12 3.56
1535 1537 3.536956 AGCCATGGAAAGAATGCATTG 57.463 42.857 18.59 0.00 38.12 2.82
1536 1538 2.169769 AGCCATGGAAAGAATGCATTGG 59.830 45.455 18.59 11.07 38.12 3.16
1537 1539 2.093341 GCCATGGAAAGAATGCATTGGT 60.093 45.455 18.59 0.14 38.12 3.67
1538 1540 3.788937 CCATGGAAAGAATGCATTGGTC 58.211 45.455 18.59 10.54 38.12 4.02
1539 1541 3.441163 CATGGAAAGAATGCATTGGTCG 58.559 45.455 18.59 0.00 38.12 4.79
1540 1542 2.789213 TGGAAAGAATGCATTGGTCGA 58.211 42.857 18.59 5.50 0.00 4.20
1541 1543 3.355378 TGGAAAGAATGCATTGGTCGAT 58.645 40.909 18.59 0.00 0.00 3.59
1542 1544 3.129113 TGGAAAGAATGCATTGGTCGATG 59.871 43.478 18.59 0.00 0.00 3.84
1543 1545 3.129287 GGAAAGAATGCATTGGTCGATGT 59.871 43.478 18.59 0.00 0.00 3.06
1544 1546 4.346129 GAAAGAATGCATTGGTCGATGTC 58.654 43.478 18.59 0.00 0.00 3.06
1545 1547 1.935873 AGAATGCATTGGTCGATGTCG 59.064 47.619 18.59 0.00 41.45 4.35
1554 1556 4.736739 TCGATGTCGAGTCAGGGT 57.263 55.556 0.21 0.00 44.22 4.34
1555 1557 3.867549 TCGATGTCGAGTCAGGGTA 57.132 52.632 0.21 0.00 44.22 3.69
1556 1558 1.664873 TCGATGTCGAGTCAGGGTAG 58.335 55.000 0.21 0.00 44.22 3.18
1557 1559 0.029567 CGATGTCGAGTCAGGGTAGC 59.970 60.000 0.00 0.00 43.02 3.58
1558 1560 0.386113 GATGTCGAGTCAGGGTAGCC 59.614 60.000 1.60 1.60 0.00 3.93
1559 1561 1.384989 ATGTCGAGTCAGGGTAGCCG 61.385 60.000 5.06 0.71 0.00 5.52
1560 1562 2.439701 TCGAGTCAGGGTAGCCGG 60.440 66.667 5.06 4.80 0.00 6.13
1561 1563 2.754658 CGAGTCAGGGTAGCCGGT 60.755 66.667 10.97 0.00 0.00 5.28
1562 1564 2.893398 GAGTCAGGGTAGCCGGTG 59.107 66.667 10.97 2.40 0.00 4.94
1563 1565 1.982938 GAGTCAGGGTAGCCGGTGT 60.983 63.158 10.97 0.00 0.00 4.16
1564 1566 1.946475 GAGTCAGGGTAGCCGGTGTC 61.946 65.000 10.97 5.51 0.00 3.67
1565 1567 3.066190 TCAGGGTAGCCGGTGTCG 61.066 66.667 10.97 0.00 0.00 4.35
1566 1568 3.066190 CAGGGTAGCCGGTGTCGA 61.066 66.667 1.90 0.00 39.00 4.20
1567 1569 2.754658 AGGGTAGCCGGTGTCGAG 60.755 66.667 1.90 0.00 39.00 4.04
1568 1570 3.066814 GGGTAGCCGGTGTCGAGT 61.067 66.667 1.90 0.00 39.00 4.18
1569 1571 1.750399 GGGTAGCCGGTGTCGAGTA 60.750 63.158 1.90 0.00 39.00 2.59
1570 1572 1.315257 GGGTAGCCGGTGTCGAGTAA 61.315 60.000 1.90 0.00 39.00 2.24
1571 1573 0.100146 GGTAGCCGGTGTCGAGTAAG 59.900 60.000 1.90 0.00 39.00 2.34
1572 1574 0.525029 GTAGCCGGTGTCGAGTAAGC 60.525 60.000 1.90 0.00 39.00 3.09
1573 1575 1.660560 TAGCCGGTGTCGAGTAAGCC 61.661 60.000 1.90 0.00 39.00 4.35
1574 1576 2.202570 CCGGTGTCGAGTAAGCCG 60.203 66.667 0.00 0.00 41.82 5.52
1575 1577 2.879462 CGGTGTCGAGTAAGCCGC 60.879 66.667 0.00 0.00 39.00 6.53
1576 1578 2.508663 GGTGTCGAGTAAGCCGCC 60.509 66.667 0.00 0.00 0.00 6.13
1577 1579 2.260434 GTGTCGAGTAAGCCGCCA 59.740 61.111 0.00 0.00 0.00 5.69
1578 1580 1.153628 GTGTCGAGTAAGCCGCCAT 60.154 57.895 0.00 0.00 0.00 4.40
1579 1581 1.153647 TGTCGAGTAAGCCGCCATG 60.154 57.895 0.00 0.00 0.00 3.66
1580 1582 1.883084 GTCGAGTAAGCCGCCATGG 60.883 63.158 7.63 7.63 42.50 3.66
1581 1583 2.186903 CGAGTAAGCCGCCATGGT 59.813 61.111 14.67 0.00 41.21 3.55
1582 1584 2.173669 CGAGTAAGCCGCCATGGTG 61.174 63.158 18.88 18.88 41.21 4.17
1583 1585 2.438434 AGTAAGCCGCCATGGTGC 60.438 61.111 20.39 18.83 41.21 5.01
1584 1586 3.518068 GTAAGCCGCCATGGTGCC 61.518 66.667 20.39 9.32 41.21 5.01
1607 1609 4.379243 CGCAAGGAGGCACCGAGT 62.379 66.667 0.00 0.00 44.74 4.18
1608 1610 2.032681 GCAAGGAGGCACCGAGTT 59.967 61.111 0.00 0.00 44.74 3.01
1609 1611 1.295423 GCAAGGAGGCACCGAGTTA 59.705 57.895 0.00 0.00 44.74 2.24
1610 1612 0.741221 GCAAGGAGGCACCGAGTTAG 60.741 60.000 0.00 0.00 44.74 2.34
1611 1613 0.608640 CAAGGAGGCACCGAGTTAGT 59.391 55.000 0.00 0.00 44.74 2.24
1612 1614 0.896226 AAGGAGGCACCGAGTTAGTC 59.104 55.000 0.00 0.00 44.74 2.59
1613 1615 0.251653 AGGAGGCACCGAGTTAGTCA 60.252 55.000 0.00 0.00 44.74 3.41
1614 1616 0.824759 GGAGGCACCGAGTTAGTCAT 59.175 55.000 0.00 0.00 0.00 3.06
1615 1617 1.471676 GGAGGCACCGAGTTAGTCATG 60.472 57.143 0.00 0.00 0.00 3.07
1616 1618 0.537188 AGGCACCGAGTTAGTCATGG 59.463 55.000 0.00 0.00 0.00 3.66
1617 1619 0.462047 GGCACCGAGTTAGTCATGGG 60.462 60.000 0.00 0.00 0.00 4.00
1618 1620 1.090052 GCACCGAGTTAGTCATGGGC 61.090 60.000 0.00 0.00 0.00 5.36
1619 1621 0.249120 CACCGAGTTAGTCATGGGCA 59.751 55.000 0.00 0.00 0.00 5.36
1620 1622 0.249398 ACCGAGTTAGTCATGGGCAC 59.751 55.000 0.00 0.00 0.00 5.01
1621 1623 0.249120 CCGAGTTAGTCATGGGCACA 59.751 55.000 0.00 0.00 0.00 4.57
1622 1624 1.645034 CGAGTTAGTCATGGGCACAG 58.355 55.000 0.00 0.00 0.00 3.66
1623 1625 1.066858 CGAGTTAGTCATGGGCACAGT 60.067 52.381 0.00 0.00 0.00 3.55
1624 1626 2.350522 GAGTTAGTCATGGGCACAGTG 58.649 52.381 0.00 0.00 0.00 3.66
1625 1627 1.003580 AGTTAGTCATGGGCACAGTGG 59.996 52.381 1.84 0.00 0.00 4.00
1626 1628 1.064003 TTAGTCATGGGCACAGTGGT 58.936 50.000 1.84 0.00 0.00 4.16
1628 1630 1.228245 GTCATGGGCACAGTGGTGT 60.228 57.895 1.84 0.00 46.95 4.16
1633 1635 4.134623 GGCACAGTGGTGTCGAAA 57.865 55.556 1.84 0.00 46.95 3.46
1634 1636 2.629002 GGCACAGTGGTGTCGAAAT 58.371 52.632 1.84 0.00 46.95 2.17
1635 1637 1.803334 GGCACAGTGGTGTCGAAATA 58.197 50.000 1.84 0.00 46.95 1.40
1636 1638 1.732259 GGCACAGTGGTGTCGAAATAG 59.268 52.381 1.84 0.00 46.95 1.73
1637 1639 2.413837 GCACAGTGGTGTCGAAATAGT 58.586 47.619 1.84 0.00 46.95 2.12
1638 1640 2.157668 GCACAGTGGTGTCGAAATAGTG 59.842 50.000 1.84 0.00 46.95 2.74
1639 1641 2.736721 CACAGTGGTGTCGAAATAGTGG 59.263 50.000 0.00 0.00 40.24 4.00
1640 1642 2.367567 ACAGTGGTGTCGAAATAGTGGT 59.632 45.455 0.00 0.00 26.76 4.16
1641 1643 2.736721 CAGTGGTGTCGAAATAGTGGTG 59.263 50.000 0.00 0.00 0.00 4.17
1642 1644 1.463444 GTGGTGTCGAAATAGTGGTGC 59.537 52.381 0.00 0.00 0.00 5.01
1643 1645 0.719465 GGTGTCGAAATAGTGGTGCG 59.281 55.000 0.00 0.00 0.00 5.34
1644 1646 0.094730 GTGTCGAAATAGTGGTGCGC 59.905 55.000 0.00 0.00 0.00 6.09
1645 1647 1.017177 TGTCGAAATAGTGGTGCGCC 61.017 55.000 10.11 10.11 0.00 6.53
1646 1648 1.017177 GTCGAAATAGTGGTGCGCCA 61.017 55.000 16.89 16.89 43.73 5.69
1654 1656 2.032528 TGGTGCGCCAGGAAGAAG 59.967 61.111 16.89 0.00 40.46 2.85
1655 1657 2.347490 GGTGCGCCAGGAAGAAGA 59.653 61.111 12.58 0.00 34.09 2.87
1656 1658 2.035442 GGTGCGCCAGGAAGAAGAC 61.035 63.158 12.58 0.00 34.09 3.01
1657 1659 2.048222 TGCGCCAGGAAGAAGACG 60.048 61.111 4.18 0.00 0.00 4.18
1658 1660 2.048127 GCGCCAGGAAGAAGACGT 60.048 61.111 0.00 0.00 0.00 4.34
1659 1661 1.668151 GCGCCAGGAAGAAGACGTT 60.668 57.895 0.00 0.00 0.00 3.99
1660 1662 1.901650 GCGCCAGGAAGAAGACGTTG 61.902 60.000 0.00 0.00 0.00 4.10
1661 1663 0.600255 CGCCAGGAAGAAGACGTTGT 60.600 55.000 0.00 0.00 0.00 3.32
1662 1664 1.594331 GCCAGGAAGAAGACGTTGTT 58.406 50.000 0.00 0.00 0.00 2.83
1663 1665 1.264288 GCCAGGAAGAAGACGTTGTTG 59.736 52.381 0.00 0.00 0.00 3.33
1664 1666 2.833794 CCAGGAAGAAGACGTTGTTGA 58.166 47.619 0.00 0.00 0.00 3.18
1665 1667 3.403038 CCAGGAAGAAGACGTTGTTGAT 58.597 45.455 0.00 0.00 0.00 2.57
1666 1668 3.187227 CCAGGAAGAAGACGTTGTTGATG 59.813 47.826 0.00 0.00 0.00 3.07
1667 1669 4.058124 CAGGAAGAAGACGTTGTTGATGA 58.942 43.478 0.00 0.00 0.00 2.92
1671 1673 1.126846 GAAGACGTTGTTGATGAGGCG 59.873 52.381 0.00 0.00 0.00 5.52
1676 1678 0.593128 GTTGTTGATGAGGCGCACTT 59.407 50.000 10.83 0.22 0.00 3.16
1749 1751 2.241281 TCCAGAACCGGGACTAATGA 57.759 50.000 6.32 0.00 0.00 2.57
1810 1813 1.641577 CATTTCTCCCGGTTCGTCTC 58.358 55.000 0.00 0.00 0.00 3.36
1825 1828 1.542915 CGTCTCGACCTTTTAGTCCCA 59.457 52.381 0.00 0.00 32.91 4.37
1826 1829 2.670509 CGTCTCGACCTTTTAGTCCCAC 60.671 54.545 0.00 0.00 32.91 4.61
1963 1966 2.645297 TGGGGTTTGAGGCATTAGTACA 59.355 45.455 0.00 0.00 0.00 2.90
1982 1985 3.960237 GTTCATGGCACGAACCGA 58.040 55.556 15.10 0.00 37.40 4.69
2156 2175 8.324567 TGTGAATTTCGACTTTATTTGCAAAAC 58.675 29.630 17.19 4.35 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.866651 ACTACTAGGCATGCAAGACTTG 58.133 45.455 21.36 11.02 0.00 3.16
5 6 4.559862 AACTACTAGGCATGCAAGACTT 57.440 40.909 21.36 7.36 0.00 3.01
6 7 5.677319 TTAACTACTAGGCATGCAAGACT 57.323 39.130 21.36 1.45 0.00 3.24
7 8 6.737254 TTTTAACTACTAGGCATGCAAGAC 57.263 37.500 21.36 1.15 0.00 3.01
8 9 7.148086 CCATTTTTAACTACTAGGCATGCAAGA 60.148 37.037 21.36 2.38 0.00 3.02
9 10 6.974622 CCATTTTTAACTACTAGGCATGCAAG 59.025 38.462 21.36 18.03 0.00 4.01
10 11 6.661377 TCCATTTTTAACTACTAGGCATGCAA 59.339 34.615 21.36 5.87 0.00 4.08
11 12 6.184068 TCCATTTTTAACTACTAGGCATGCA 58.816 36.000 21.36 0.00 0.00 3.96
12 13 6.693315 TCCATTTTTAACTACTAGGCATGC 57.307 37.500 9.90 9.90 0.00 4.06
13 14 8.519526 TGTTTCCATTTTTAACTACTAGGCATG 58.480 33.333 0.00 0.00 0.00 4.06
14 15 8.644374 TGTTTCCATTTTTAACTACTAGGCAT 57.356 30.769 0.00 0.00 0.00 4.40
15 16 8.466617 TTGTTTCCATTTTTAACTACTAGGCA 57.533 30.769 0.00 0.00 0.00 4.75
16 17 9.752961 TTTTGTTTCCATTTTTAACTACTAGGC 57.247 29.630 0.00 0.00 0.00 3.93
27 28 8.351461 CCATGCTTACATTTTGTTTCCATTTTT 58.649 29.630 0.00 0.00 32.87 1.94
28 29 7.718753 TCCATGCTTACATTTTGTTTCCATTTT 59.281 29.630 0.00 0.00 32.87 1.82
29 30 7.222872 TCCATGCTTACATTTTGTTTCCATTT 58.777 30.769 0.00 0.00 32.87 2.32
30 31 6.767456 TCCATGCTTACATTTTGTTTCCATT 58.233 32.000 0.00 0.00 32.87 3.16
31 32 6.357579 TCCATGCTTACATTTTGTTTCCAT 57.642 33.333 0.00 0.00 32.87 3.41
32 33 5.798125 TCCATGCTTACATTTTGTTTCCA 57.202 34.783 0.00 0.00 32.87 3.53
33 34 7.351981 GTTTTCCATGCTTACATTTTGTTTCC 58.648 34.615 0.00 0.00 32.87 3.13
34 35 7.226523 AGGTTTTCCATGCTTACATTTTGTTTC 59.773 33.333 0.00 0.00 43.73 2.78
35 36 7.053498 AGGTTTTCCATGCTTACATTTTGTTT 58.947 30.769 0.00 0.00 43.73 2.83
36 37 6.591001 AGGTTTTCCATGCTTACATTTTGTT 58.409 32.000 0.00 0.00 43.73 2.83
37 38 6.173427 AGGTTTTCCATGCTTACATTTTGT 57.827 33.333 0.00 0.00 43.73 2.83
38 39 6.890558 CAAGGTTTTCCATGCTTACATTTTG 58.109 36.000 0.00 0.00 43.73 2.44
49 50 6.563222 ATTTTTCATGCAAGGTTTTCCATG 57.437 33.333 0.00 0.00 43.73 3.66
50 51 7.678837 TCTATTTTTCATGCAAGGTTTTCCAT 58.321 30.769 0.00 0.00 43.73 3.41
51 52 7.060383 TCTATTTTTCATGCAAGGTTTTCCA 57.940 32.000 0.00 0.00 43.73 3.53
52 53 9.305925 CTATCTATTTTTCATGCAAGGTTTTCC 57.694 33.333 0.00 0.00 41.05 3.13
53 54 9.305925 CCTATCTATTTTTCATGCAAGGTTTTC 57.694 33.333 0.00 0.00 0.00 2.29
54 55 9.034800 TCCTATCTATTTTTCATGCAAGGTTTT 57.965 29.630 0.00 0.00 0.00 2.43
55 56 8.593945 TCCTATCTATTTTTCATGCAAGGTTT 57.406 30.769 0.00 0.00 0.00 3.27
56 57 8.593945 TTCCTATCTATTTTTCATGCAAGGTT 57.406 30.769 0.00 0.00 0.00 3.50
57 58 8.593945 TTTCCTATCTATTTTTCATGCAAGGT 57.406 30.769 0.00 0.00 0.00 3.50
58 59 8.906867 TCTTTCCTATCTATTTTTCATGCAAGG 58.093 33.333 0.00 0.00 0.00 3.61
76 77 9.695526 CACAATGATTGTTTGATTTCTTTCCTA 57.304 29.630 8.30 0.00 43.23 2.94
77 78 7.172019 GCACAATGATTGTTTGATTTCTTTCCT 59.828 33.333 8.30 0.00 43.23 3.36
78 79 7.041916 TGCACAATGATTGTTTGATTTCTTTCC 60.042 33.333 8.30 0.00 43.23 3.13
79 80 7.853524 TGCACAATGATTGTTTGATTTCTTTC 58.146 30.769 8.30 0.00 43.23 2.62
80 81 7.519328 GCTGCACAATGATTGTTTGATTTCTTT 60.519 33.333 8.30 0.00 43.23 2.52
81 82 6.073440 GCTGCACAATGATTGTTTGATTTCTT 60.073 34.615 8.30 0.00 43.23 2.52
82 83 5.407387 GCTGCACAATGATTGTTTGATTTCT 59.593 36.000 8.30 0.00 43.23 2.52
83 84 5.614760 GCTGCACAATGATTGTTTGATTTC 58.385 37.500 8.30 0.00 43.23 2.17
84 85 4.150980 CGCTGCACAATGATTGTTTGATTT 59.849 37.500 8.30 0.00 43.23 2.17
85 86 3.676172 CGCTGCACAATGATTGTTTGATT 59.324 39.130 8.30 0.00 43.23 2.57
86 87 3.057386 TCGCTGCACAATGATTGTTTGAT 60.057 39.130 8.30 0.00 43.23 2.57
87 88 2.292845 TCGCTGCACAATGATTGTTTGA 59.707 40.909 8.30 0.00 43.23 2.69
88 89 2.663808 TCGCTGCACAATGATTGTTTG 58.336 42.857 8.30 0.00 43.23 2.93
89 90 3.581024 ATCGCTGCACAATGATTGTTT 57.419 38.095 8.30 0.00 43.23 2.83
90 91 3.691118 AGTATCGCTGCACAATGATTGTT 59.309 39.130 8.30 0.00 43.23 2.83
91 92 3.273434 AGTATCGCTGCACAATGATTGT 58.727 40.909 4.72 4.72 46.75 2.71
92 93 3.957671 AGTATCGCTGCACAATGATTG 57.042 42.857 3.16 3.16 0.00 2.67
93 94 4.273480 GGTAAGTATCGCTGCACAATGATT 59.727 41.667 0.00 0.00 0.00 2.57
94 95 3.809832 GGTAAGTATCGCTGCACAATGAT 59.190 43.478 0.00 0.00 0.00 2.45
95 96 3.118775 AGGTAAGTATCGCTGCACAATGA 60.119 43.478 0.00 0.00 0.00 2.57
96 97 3.198068 AGGTAAGTATCGCTGCACAATG 58.802 45.455 0.00 0.00 0.00 2.82
97 98 3.543680 AGGTAAGTATCGCTGCACAAT 57.456 42.857 0.00 0.00 0.00 2.71
98 99 4.459390 TTAGGTAAGTATCGCTGCACAA 57.541 40.909 0.00 0.00 0.00 3.33
99 100 4.459390 TTTAGGTAAGTATCGCTGCACA 57.541 40.909 0.00 0.00 0.00 4.57
100 101 4.628333 TGTTTTAGGTAAGTATCGCTGCAC 59.372 41.667 0.00 0.00 0.00 4.57
101 102 4.823157 TGTTTTAGGTAAGTATCGCTGCA 58.177 39.130 0.00 0.00 0.00 4.41
102 103 5.789710 TTGTTTTAGGTAAGTATCGCTGC 57.210 39.130 0.00 0.00 0.00 5.25
103 104 7.124347 TGTTTGTTTTAGGTAAGTATCGCTG 57.876 36.000 0.00 0.00 0.00 5.18
104 105 7.094933 CCTTGTTTGTTTTAGGTAAGTATCGCT 60.095 37.037 0.00 0.00 0.00 4.93
105 106 7.019418 CCTTGTTTGTTTTAGGTAAGTATCGC 58.981 38.462 0.00 0.00 0.00 4.58
106 107 8.013378 CACCTTGTTTGTTTTAGGTAAGTATCG 58.987 37.037 0.00 0.00 38.93 2.92
107 108 7.806487 GCACCTTGTTTGTTTTAGGTAAGTATC 59.194 37.037 0.00 0.00 38.93 2.24
108 109 7.255695 GGCACCTTGTTTGTTTTAGGTAAGTAT 60.256 37.037 0.00 0.00 38.93 2.12
109 110 6.039605 GGCACCTTGTTTGTTTTAGGTAAGTA 59.960 38.462 0.00 0.00 38.93 2.24
110 111 5.163488 GGCACCTTGTTTGTTTTAGGTAAGT 60.163 40.000 0.00 0.00 38.93 2.24
111 112 5.286438 GGCACCTTGTTTGTTTTAGGTAAG 58.714 41.667 0.00 0.00 38.93 2.34
112 113 5.265350 GGCACCTTGTTTGTTTTAGGTAA 57.735 39.130 0.00 0.00 38.93 2.85
113 114 4.922471 GGCACCTTGTTTGTTTTAGGTA 57.078 40.909 0.00 0.00 38.93 3.08
114 115 3.812156 GGCACCTTGTTTGTTTTAGGT 57.188 42.857 0.00 0.00 41.58 3.08
184 185 9.601217 GTACTCCAAGTTGATTATTGTACTCAT 57.399 33.333 3.87 0.00 0.00 2.90
185 186 8.590204 TGTACTCCAAGTTGATTATTGTACTCA 58.410 33.333 3.87 0.00 31.91 3.41
186 187 8.997621 TGTACTCCAAGTTGATTATTGTACTC 57.002 34.615 3.87 0.00 31.91 2.59
187 188 9.436957 CTTGTACTCCAAGTTGATTATTGTACT 57.563 33.333 3.87 0.00 44.64 2.73
202 203 2.224523 CCTGCCTTGTCTTGTACTCCAA 60.225 50.000 0.00 0.00 0.00 3.53
203 204 1.347707 CCTGCCTTGTCTTGTACTCCA 59.652 52.381 0.00 0.00 0.00 3.86
204 205 1.623811 TCCTGCCTTGTCTTGTACTCC 59.376 52.381 0.00 0.00 0.00 3.85
205 206 3.067833 GTTCCTGCCTTGTCTTGTACTC 58.932 50.000 0.00 0.00 0.00 2.59
206 207 2.438021 TGTTCCTGCCTTGTCTTGTACT 59.562 45.455 0.00 0.00 0.00 2.73
207 208 2.846193 TGTTCCTGCCTTGTCTTGTAC 58.154 47.619 0.00 0.00 0.00 2.90
208 209 3.569194 TTGTTCCTGCCTTGTCTTGTA 57.431 42.857 0.00 0.00 0.00 2.41
209 210 2.435372 TTGTTCCTGCCTTGTCTTGT 57.565 45.000 0.00 0.00 0.00 3.16
210 211 3.305608 GGATTTGTTCCTGCCTTGTCTTG 60.306 47.826 0.00 0.00 41.78 3.02
211 212 2.893489 GGATTTGTTCCTGCCTTGTCTT 59.107 45.455 0.00 0.00 41.78 3.01
212 213 2.519013 GGATTTGTTCCTGCCTTGTCT 58.481 47.619 0.00 0.00 41.78 3.41
246 247 8.982723 TCTAGAGCTTTGTGATTATTAGGAAGT 58.017 33.333 0.00 0.00 0.00 3.01
247 248 9.474920 CTCTAGAGCTTTGTGATTATTAGGAAG 57.525 37.037 6.86 0.00 0.00 3.46
248 249 8.424918 CCTCTAGAGCTTTGTGATTATTAGGAA 58.575 37.037 14.73 0.00 0.00 3.36
249 250 7.785028 TCCTCTAGAGCTTTGTGATTATTAGGA 59.215 37.037 14.73 0.00 0.00 2.94
250 251 7.957002 TCCTCTAGAGCTTTGTGATTATTAGG 58.043 38.462 14.73 0.00 0.00 2.69
251 252 9.474920 CTTCCTCTAGAGCTTTGTGATTATTAG 57.525 37.037 14.73 0.00 0.00 1.73
252 253 8.424918 CCTTCCTCTAGAGCTTTGTGATTATTA 58.575 37.037 14.73 0.00 0.00 0.98
253 254 7.278875 CCTTCCTCTAGAGCTTTGTGATTATT 58.721 38.462 14.73 0.00 0.00 1.40
254 255 6.183361 CCCTTCCTCTAGAGCTTTGTGATTAT 60.183 42.308 14.73 0.00 0.00 1.28
255 256 5.129485 CCCTTCCTCTAGAGCTTTGTGATTA 59.871 44.000 14.73 0.00 0.00 1.75
256 257 4.080638 CCCTTCCTCTAGAGCTTTGTGATT 60.081 45.833 14.73 0.00 0.00 2.57
257 258 3.454082 CCCTTCCTCTAGAGCTTTGTGAT 59.546 47.826 14.73 0.00 0.00 3.06
258 259 2.834549 CCCTTCCTCTAGAGCTTTGTGA 59.165 50.000 14.73 2.15 0.00 3.58
379 380 4.040461 GGATTCAACGGGGAGAATATCTCA 59.960 45.833 9.40 0.00 45.12 3.27
383 384 4.718961 CAAGGATTCAACGGGGAGAATAT 58.281 43.478 0.00 0.00 34.79 1.28
478 479 2.327200 TGAGAGCAATGCATGAGAGG 57.673 50.000 8.35 0.00 0.00 3.69
492 493 4.267536 TCCAAAATCTCCTTGCATGAGAG 58.732 43.478 18.09 14.00 41.85 3.20
651 652 5.991861 TCATGTGTAATATTGTTACCGGGT 58.008 37.500 6.32 4.46 0.00 5.28
652 653 8.610248 TTATCATGTGTAATATTGTTACCGGG 57.390 34.615 6.32 0.00 0.00 5.73
693 694 6.419116 CACGAGTCATAATCATCGACTGAATT 59.581 38.462 0.00 0.00 40.04 2.17
724 725 0.819259 GGGATATGAAGCAGCGCCAA 60.819 55.000 2.29 0.00 0.00 4.52
736 737 1.001746 AGCATGCTCACGAGGGATATG 59.998 52.381 16.30 0.00 0.00 1.78
741 742 2.584418 CGAGCATGCTCACGAGGG 60.584 66.667 38.97 22.49 42.86 4.30
788 789 0.673985 CTTCACACAGGTCTCGTCCA 59.326 55.000 0.00 0.00 0.00 4.02
824 825 2.095008 CGACGAGCATCCATAGCTATGT 60.095 50.000 27.75 12.45 43.58 2.29
977 979 1.912371 GACCTTGGAAAAGCCTCGCG 61.912 60.000 0.00 0.00 37.63 5.87
1070 1072 4.959210 GCTCCCCTATCTCAGCTATGATAA 59.041 45.833 8.55 0.00 34.12 1.75
1117 1119 9.783081 TGCTGATCTAGAAATATGCTGAATAAA 57.217 29.630 0.00 0.00 0.00 1.40
1217 1219 7.934120 CCATAAGGCTAGTTACAAGAAAGCTAT 59.066 37.037 0.00 0.00 33.67 2.97
1256 1258 4.013050 GGAGCTTTATTCAACAGAAGCCT 58.987 43.478 3.56 0.00 44.13 4.58
1262 1264 6.966534 AATATGGGGAGCTTTATTCAACAG 57.033 37.500 0.00 0.00 0.00 3.16
1299 1301 1.202879 GGGGGATGTTGAGTGTTGTGA 60.203 52.381 0.00 0.00 0.00 3.58
1300 1302 1.247567 GGGGGATGTTGAGTGTTGTG 58.752 55.000 0.00 0.00 0.00 3.33
1301 1303 0.250727 CGGGGGATGTTGAGTGTTGT 60.251 55.000 0.00 0.00 0.00 3.32
1302 1304 1.586154 GCGGGGGATGTTGAGTGTTG 61.586 60.000 0.00 0.00 0.00 3.33
1303 1305 1.303317 GCGGGGGATGTTGAGTGTT 60.303 57.895 0.00 0.00 0.00 3.32
1304 1306 2.351276 GCGGGGGATGTTGAGTGT 59.649 61.111 0.00 0.00 0.00 3.55
1305 1307 1.746615 CTGCGGGGGATGTTGAGTG 60.747 63.158 0.00 0.00 0.00 3.51
1306 1308 2.185310 GACTGCGGGGGATGTTGAGT 62.185 60.000 0.00 0.00 0.00 3.41
1307 1309 1.450312 GACTGCGGGGGATGTTGAG 60.450 63.158 0.00 0.00 0.00 3.02
1308 1310 2.220586 TGACTGCGGGGGATGTTGA 61.221 57.895 0.00 0.00 0.00 3.18
1309 1311 2.040544 GTGACTGCGGGGGATGTTG 61.041 63.158 0.00 0.00 0.00 3.33
1310 1312 2.063015 TTGTGACTGCGGGGGATGTT 62.063 55.000 0.00 0.00 0.00 2.71
1311 1313 1.852157 ATTGTGACTGCGGGGGATGT 61.852 55.000 0.00 0.00 0.00 3.06
1312 1314 1.077501 ATTGTGACTGCGGGGGATG 60.078 57.895 0.00 0.00 0.00 3.51
1313 1315 1.077501 CATTGTGACTGCGGGGGAT 60.078 57.895 0.00 0.00 0.00 3.85
1314 1316 2.350895 CATTGTGACTGCGGGGGA 59.649 61.111 0.00 0.00 0.00 4.81
1315 1317 2.191786 TACCATTGTGACTGCGGGGG 62.192 60.000 0.00 0.00 0.00 5.40
1316 1318 0.744414 CTACCATTGTGACTGCGGGG 60.744 60.000 0.00 0.00 0.00 5.73
1317 1319 1.369091 GCTACCATTGTGACTGCGGG 61.369 60.000 0.00 0.00 0.00 6.13
1318 1320 1.695893 CGCTACCATTGTGACTGCGG 61.696 60.000 0.00 0.00 38.54 5.69
1319 1321 0.735978 TCGCTACCATTGTGACTGCG 60.736 55.000 0.00 0.00 42.70 5.18
1320 1322 1.002366 CTCGCTACCATTGTGACTGC 58.998 55.000 0.00 0.00 0.00 4.40
1321 1323 1.645034 CCTCGCTACCATTGTGACTG 58.355 55.000 0.00 0.00 0.00 3.51
1322 1324 0.108138 GCCTCGCTACCATTGTGACT 60.108 55.000 0.00 0.00 0.00 3.41
1323 1325 1.421410 CGCCTCGCTACCATTGTGAC 61.421 60.000 0.00 0.00 0.00 3.67
1324 1326 1.153647 CGCCTCGCTACCATTGTGA 60.154 57.895 0.00 0.00 0.00 3.58
1325 1327 2.173669 CCGCCTCGCTACCATTGTG 61.174 63.158 0.00 0.00 0.00 3.33
1326 1328 2.186903 CCGCCTCGCTACCATTGT 59.813 61.111 0.00 0.00 0.00 2.71
1327 1329 2.588877 CCCGCCTCGCTACCATTG 60.589 66.667 0.00 0.00 0.00 2.82
1328 1330 3.081409 ACCCGCCTCGCTACCATT 61.081 61.111 0.00 0.00 0.00 3.16
1329 1331 3.849951 CACCCGCCTCGCTACCAT 61.850 66.667 0.00 0.00 0.00 3.55
1332 1334 4.814294 CACCACCCGCCTCGCTAC 62.814 72.222 0.00 0.00 0.00 3.58
1336 1338 4.436998 GTCTCACCACCCGCCTCG 62.437 72.222 0.00 0.00 0.00 4.63
1337 1339 4.083862 GGTCTCACCACCCGCCTC 62.084 72.222 0.00 0.00 38.42 4.70
1341 1343 3.760035 CTCCGGTCTCACCACCCG 61.760 72.222 0.00 0.00 38.47 5.28
1342 1344 1.889530 CTTCTCCGGTCTCACCACCC 61.890 65.000 0.00 0.00 38.47 4.61
1343 1345 0.898789 TCTTCTCCGGTCTCACCACC 60.899 60.000 0.00 0.00 38.47 4.61
1344 1346 0.966920 TTCTTCTCCGGTCTCACCAC 59.033 55.000 0.00 0.00 38.47 4.16
1345 1347 1.825474 GATTCTTCTCCGGTCTCACCA 59.175 52.381 0.00 0.00 38.47 4.17
1346 1348 1.137282 GGATTCTTCTCCGGTCTCACC 59.863 57.143 0.00 0.00 34.05 4.02
1347 1349 2.588027 GGATTCTTCTCCGGTCTCAC 57.412 55.000 0.00 0.00 0.00 3.51
1355 1357 3.459145 GCTTACCTTCGGATTCTTCTCC 58.541 50.000 0.00 0.00 0.00 3.71
1356 1358 3.459145 GGCTTACCTTCGGATTCTTCTC 58.541 50.000 0.00 0.00 0.00 2.87
1357 1359 2.159085 CGGCTTACCTTCGGATTCTTCT 60.159 50.000 0.00 0.00 0.00 2.85
1358 1360 2.159142 TCGGCTTACCTTCGGATTCTTC 60.159 50.000 0.00 0.00 0.00 2.87
1359 1361 1.829222 TCGGCTTACCTTCGGATTCTT 59.171 47.619 0.00 0.00 0.00 2.52
1360 1362 1.136500 GTCGGCTTACCTTCGGATTCT 59.864 52.381 0.00 0.00 0.00 2.40
1361 1363 1.568606 GTCGGCTTACCTTCGGATTC 58.431 55.000 0.00 0.00 0.00 2.52
1362 1364 0.179119 CGTCGGCTTACCTTCGGATT 60.179 55.000 0.00 0.00 0.00 3.01
1363 1365 1.436336 CGTCGGCTTACCTTCGGAT 59.564 57.895 0.00 0.00 0.00 4.18
1364 1366 2.703798 CCGTCGGCTTACCTTCGGA 61.704 63.158 0.00 0.00 46.04 4.55
1365 1367 2.202703 CCGTCGGCTTACCTTCGG 60.203 66.667 0.00 0.00 41.13 4.30
1366 1368 1.515736 GTCCGTCGGCTTACCTTCG 60.516 63.158 6.34 0.00 0.00 3.79
1367 1369 0.037975 TTGTCCGTCGGCTTACCTTC 60.038 55.000 6.34 0.00 0.00 3.46
1368 1370 0.393820 TTTGTCCGTCGGCTTACCTT 59.606 50.000 6.34 0.00 0.00 3.50
1369 1371 0.320160 GTTTGTCCGTCGGCTTACCT 60.320 55.000 6.34 0.00 0.00 3.08
1370 1372 1.293963 GGTTTGTCCGTCGGCTTACC 61.294 60.000 6.34 7.60 0.00 2.85
1371 1373 1.293963 GGGTTTGTCCGTCGGCTTAC 61.294 60.000 6.34 0.00 37.00 2.34
1372 1374 1.004679 GGGTTTGTCCGTCGGCTTA 60.005 57.895 6.34 0.00 37.00 3.09
1373 1375 2.281276 GGGTTTGTCCGTCGGCTT 60.281 61.111 6.34 0.00 37.00 4.35
1374 1376 4.324991 GGGGTTTGTCCGTCGGCT 62.325 66.667 6.34 0.00 37.00 5.52
1389 1391 3.669939 ACTTCCTTATGAATGTGGGGG 57.330 47.619 0.00 0.00 31.06 5.40
1390 1392 4.158394 CACAACTTCCTTATGAATGTGGGG 59.842 45.833 0.00 0.00 39.03 4.96
1391 1393 5.314923 CACAACTTCCTTATGAATGTGGG 57.685 43.478 0.00 0.00 39.03 4.61
1393 1395 4.460382 AGCCACAACTTCCTTATGAATGTG 59.540 41.667 0.00 0.00 40.93 3.21
1394 1396 4.666512 AGCCACAACTTCCTTATGAATGT 58.333 39.130 0.00 0.00 31.06 2.71
1395 1397 6.115446 TCTAGCCACAACTTCCTTATGAATG 58.885 40.000 0.00 0.00 31.06 2.67
1396 1398 6.069963 ACTCTAGCCACAACTTCCTTATGAAT 60.070 38.462 0.00 0.00 31.06 2.57
1397 1399 5.248477 ACTCTAGCCACAACTTCCTTATGAA 59.752 40.000 0.00 0.00 0.00 2.57
1398 1400 4.777896 ACTCTAGCCACAACTTCCTTATGA 59.222 41.667 0.00 0.00 0.00 2.15
1399 1401 4.872691 CACTCTAGCCACAACTTCCTTATG 59.127 45.833 0.00 0.00 0.00 1.90
1400 1402 4.080863 CCACTCTAGCCACAACTTCCTTAT 60.081 45.833 0.00 0.00 0.00 1.73
1401 1403 3.260884 CCACTCTAGCCACAACTTCCTTA 59.739 47.826 0.00 0.00 0.00 2.69
1402 1404 2.039084 CCACTCTAGCCACAACTTCCTT 59.961 50.000 0.00 0.00 0.00 3.36
1403 1405 1.625818 CCACTCTAGCCACAACTTCCT 59.374 52.381 0.00 0.00 0.00 3.36
1404 1406 1.623811 TCCACTCTAGCCACAACTTCC 59.376 52.381 0.00 0.00 0.00 3.46
1405 1407 3.402628 TTCCACTCTAGCCACAACTTC 57.597 47.619 0.00 0.00 0.00 3.01
1406 1408 3.477530 GTTTCCACTCTAGCCACAACTT 58.522 45.455 0.00 0.00 0.00 2.66
1407 1409 2.224548 GGTTTCCACTCTAGCCACAACT 60.225 50.000 0.00 0.00 0.00 3.16
1408 1410 2.152016 GGTTTCCACTCTAGCCACAAC 58.848 52.381 0.00 0.00 0.00 3.32
1409 1411 1.270625 CGGTTTCCACTCTAGCCACAA 60.271 52.381 0.00 0.00 0.00 3.33
1410 1412 0.320374 CGGTTTCCACTCTAGCCACA 59.680 55.000 0.00 0.00 0.00 4.17
1411 1413 0.606604 TCGGTTTCCACTCTAGCCAC 59.393 55.000 0.00 0.00 0.00 5.01
1412 1414 0.606604 GTCGGTTTCCACTCTAGCCA 59.393 55.000 0.00 0.00 0.00 4.75
1413 1415 0.458025 CGTCGGTTTCCACTCTAGCC 60.458 60.000 0.00 0.00 0.00 3.93
1414 1416 0.524862 TCGTCGGTTTCCACTCTAGC 59.475 55.000 0.00 0.00 0.00 3.42
1415 1417 1.132643 CCTCGTCGGTTTCCACTCTAG 59.867 57.143 0.00 0.00 0.00 2.43
1416 1418 1.171308 CCTCGTCGGTTTCCACTCTA 58.829 55.000 0.00 0.00 0.00 2.43
1417 1419 0.826672 ACCTCGTCGGTTTCCACTCT 60.827 55.000 0.00 0.00 46.37 3.24
1418 1420 1.664306 ACCTCGTCGGTTTCCACTC 59.336 57.895 0.00 0.00 46.37 3.51
1419 1421 3.866539 ACCTCGTCGGTTTCCACT 58.133 55.556 0.00 0.00 46.37 4.00
1427 1429 2.383527 GCTTGAGCAACCTCGTCGG 61.384 63.158 0.00 0.00 41.13 4.79
1428 1430 3.159984 GCTTGAGCAACCTCGTCG 58.840 61.111 0.00 0.00 41.13 5.12
1438 1440 2.754995 GCTACCGCCTTGCTTGAGC 61.755 63.158 0.00 0.00 42.50 4.26
1439 1441 1.078848 AGCTACCGCCTTGCTTGAG 60.079 57.895 0.00 0.00 36.60 3.02
1440 1442 1.079127 GAGCTACCGCCTTGCTTGA 60.079 57.895 0.00 0.00 37.16 3.02
1441 1443 0.674895 AAGAGCTACCGCCTTGCTTG 60.675 55.000 0.00 0.00 37.16 4.01
1442 1444 0.036875 AAAGAGCTACCGCCTTGCTT 59.963 50.000 0.00 0.00 37.16 3.91
1443 1445 0.902531 TAAAGAGCTACCGCCTTGCT 59.097 50.000 0.00 0.00 40.02 3.91
1444 1446 1.599542 CATAAAGAGCTACCGCCTTGC 59.400 52.381 0.00 0.00 36.60 4.01
1445 1447 1.599542 GCATAAAGAGCTACCGCCTTG 59.400 52.381 0.00 0.00 36.60 3.61
1446 1448 1.475213 GGCATAAAGAGCTACCGCCTT 60.475 52.381 0.00 0.00 36.60 4.35
1447 1449 0.106894 GGCATAAAGAGCTACCGCCT 59.893 55.000 0.00 0.00 36.60 5.52
1448 1450 0.179056 TGGCATAAAGAGCTACCGCC 60.179 55.000 0.00 0.00 38.56 6.13
1449 1451 1.884235 ATGGCATAAAGAGCTACCGC 58.116 50.000 0.00 0.00 0.00 5.68
1450 1452 3.206150 ACAATGGCATAAAGAGCTACCG 58.794 45.455 0.00 0.00 0.00 4.02
1451 1453 3.248602 CGACAATGGCATAAAGAGCTACC 59.751 47.826 0.00 0.00 0.00 3.18
1452 1454 4.119862 TCGACAATGGCATAAAGAGCTAC 58.880 43.478 0.00 0.00 0.00 3.58
1453 1455 4.371786 CTCGACAATGGCATAAAGAGCTA 58.628 43.478 0.00 0.00 0.00 3.32
1454 1456 3.201290 CTCGACAATGGCATAAAGAGCT 58.799 45.455 0.00 0.00 0.00 4.09
1455 1457 2.289002 CCTCGACAATGGCATAAAGAGC 59.711 50.000 0.00 0.00 0.00 4.09
1456 1458 3.535561 ACCTCGACAATGGCATAAAGAG 58.464 45.455 0.00 7.70 0.00 2.85
1457 1459 3.627395 ACCTCGACAATGGCATAAAGA 57.373 42.857 0.00 0.00 0.00 2.52
1458 1460 3.248602 GCTACCTCGACAATGGCATAAAG 59.751 47.826 0.00 0.00 0.00 1.85
1459 1461 3.202906 GCTACCTCGACAATGGCATAAA 58.797 45.455 0.00 0.00 0.00 1.40
1460 1462 2.484770 GGCTACCTCGACAATGGCATAA 60.485 50.000 0.00 0.00 0.00 1.90
1461 1463 1.070134 GGCTACCTCGACAATGGCATA 59.930 52.381 0.00 0.00 0.00 3.14
1462 1464 0.179045 GGCTACCTCGACAATGGCAT 60.179 55.000 0.00 0.00 0.00 4.40
1463 1465 1.220749 GGCTACCTCGACAATGGCA 59.779 57.895 0.00 0.00 0.00 4.92
1464 1466 0.392461 TTGGCTACCTCGACAATGGC 60.392 55.000 0.00 0.00 0.00 4.40
1465 1467 1.207089 TCTTGGCTACCTCGACAATGG 59.793 52.381 0.00 0.00 0.00 3.16
1466 1468 2.544685 CTCTTGGCTACCTCGACAATG 58.455 52.381 0.00 0.00 0.00 2.82
1467 1469 1.134670 GCTCTTGGCTACCTCGACAAT 60.135 52.381 0.00 0.00 38.06 2.71
1468 1470 0.246635 GCTCTTGGCTACCTCGACAA 59.753 55.000 0.00 0.00 38.06 3.18
1469 1471 0.898326 TGCTCTTGGCTACCTCGACA 60.898 55.000 0.00 0.00 42.39 4.35
1470 1472 0.461961 ATGCTCTTGGCTACCTCGAC 59.538 55.000 0.00 0.00 42.39 4.20
1471 1473 1.957177 CTATGCTCTTGGCTACCTCGA 59.043 52.381 0.00 0.00 42.39 4.04
1472 1474 1.000283 CCTATGCTCTTGGCTACCTCG 60.000 57.143 0.00 0.00 42.39 4.63
1473 1475 1.346068 CCCTATGCTCTTGGCTACCTC 59.654 57.143 0.00 0.00 42.39 3.85
1474 1476 1.344496 ACCCTATGCTCTTGGCTACCT 60.344 52.381 0.00 0.00 42.39 3.08
1475 1477 1.132500 ACCCTATGCTCTTGGCTACC 58.868 55.000 0.00 0.00 42.39 3.18
1476 1478 2.092914 ACAACCCTATGCTCTTGGCTAC 60.093 50.000 0.00 0.00 42.39 3.58
1477 1479 2.092968 CACAACCCTATGCTCTTGGCTA 60.093 50.000 0.00 0.00 42.39 3.93
1478 1480 0.995024 ACAACCCTATGCTCTTGGCT 59.005 50.000 0.00 0.00 42.39 4.75
1479 1481 1.098050 CACAACCCTATGCTCTTGGC 58.902 55.000 0.00 0.00 42.22 4.52
1480 1482 2.496899 ACACAACCCTATGCTCTTGG 57.503 50.000 0.00 0.00 0.00 3.61
1481 1483 2.939103 GCTACACAACCCTATGCTCTTG 59.061 50.000 0.00 0.00 0.00 3.02
1482 1484 2.092914 GGCTACACAACCCTATGCTCTT 60.093 50.000 0.00 0.00 0.00 2.85
1483 1485 1.486726 GGCTACACAACCCTATGCTCT 59.513 52.381 0.00 0.00 0.00 4.09
1484 1486 1.806623 CGGCTACACAACCCTATGCTC 60.807 57.143 0.00 0.00 0.00 4.26
1485 1487 0.178068 CGGCTACACAACCCTATGCT 59.822 55.000 0.00 0.00 0.00 3.79
1486 1488 0.107848 ACGGCTACACAACCCTATGC 60.108 55.000 0.00 0.00 0.00 3.14
1487 1489 1.651987 CACGGCTACACAACCCTATG 58.348 55.000 0.00 0.00 0.00 2.23
1488 1490 0.539986 CCACGGCTACACAACCCTAT 59.460 55.000 0.00 0.00 0.00 2.57
1489 1491 0.832983 ACCACGGCTACACAACCCTA 60.833 55.000 0.00 0.00 0.00 3.53
1490 1492 2.108278 GACCACGGCTACACAACCCT 62.108 60.000 0.00 0.00 0.00 4.34
1491 1493 1.670083 GACCACGGCTACACAACCC 60.670 63.158 0.00 0.00 0.00 4.11
1492 1494 2.025418 CGACCACGGCTACACAACC 61.025 63.158 0.00 0.00 35.72 3.77
1493 1495 1.007038 TCGACCACGGCTACACAAC 60.007 57.895 0.00 0.00 40.21 3.32
1494 1496 1.287815 CTCGACCACGGCTACACAA 59.712 57.895 0.00 0.00 40.21 3.33
1495 1497 2.632544 CCTCGACCACGGCTACACA 61.633 63.158 0.00 0.00 40.21 3.72
1496 1498 1.308069 TACCTCGACCACGGCTACAC 61.308 60.000 0.00 0.00 40.21 2.90
1497 1499 1.002257 TACCTCGACCACGGCTACA 60.002 57.895 0.00 0.00 40.21 2.74
1498 1500 1.726265 CTACCTCGACCACGGCTAC 59.274 63.158 0.00 0.00 40.21 3.58
1499 1501 2.117156 GCTACCTCGACCACGGCTA 61.117 63.158 0.00 0.00 40.21 3.93
1500 1502 3.450115 GCTACCTCGACCACGGCT 61.450 66.667 0.00 0.00 40.21 5.52
1501 1503 4.509737 GGCTACCTCGACCACGGC 62.510 72.222 0.00 0.00 40.21 5.68
1502 1504 2.423898 ATGGCTACCTCGACCACGG 61.424 63.158 0.00 0.00 40.21 4.94
1503 1505 1.226974 CATGGCTACCTCGACCACG 60.227 63.158 0.00 0.00 35.99 4.94
1504 1506 1.144057 CCATGGCTACCTCGACCAC 59.856 63.158 0.00 0.00 35.99 4.16
1505 1507 0.616395 TTCCATGGCTACCTCGACCA 60.616 55.000 6.96 0.00 37.99 4.02
1506 1508 0.539986 TTTCCATGGCTACCTCGACC 59.460 55.000 6.96 0.00 0.00 4.79
1507 1509 1.480954 TCTTTCCATGGCTACCTCGAC 59.519 52.381 6.96 0.00 0.00 4.20
1508 1510 1.860641 TCTTTCCATGGCTACCTCGA 58.139 50.000 6.96 0.00 0.00 4.04
1509 1511 2.691409 TTCTTTCCATGGCTACCTCG 57.309 50.000 6.96 0.00 0.00 4.63
1510 1512 2.620585 GCATTCTTTCCATGGCTACCTC 59.379 50.000 6.96 0.00 0.00 3.85
1511 1513 2.025037 TGCATTCTTTCCATGGCTACCT 60.025 45.455 6.96 0.00 0.00 3.08
1512 1514 2.378038 TGCATTCTTTCCATGGCTACC 58.622 47.619 6.96 0.00 0.00 3.18
1513 1515 4.365723 CAATGCATTCTTTCCATGGCTAC 58.634 43.478 9.53 0.00 0.00 3.58
1514 1516 3.385433 CCAATGCATTCTTTCCATGGCTA 59.615 43.478 9.53 0.00 0.00 3.93
1515 1517 2.169769 CCAATGCATTCTTTCCATGGCT 59.830 45.455 9.53 0.00 0.00 4.75
1516 1518 2.093341 ACCAATGCATTCTTTCCATGGC 60.093 45.455 9.53 0.00 0.00 4.40
1517 1519 3.735820 CGACCAATGCATTCTTTCCATGG 60.736 47.826 9.53 4.97 0.00 3.66
1518 1520 3.129113 TCGACCAATGCATTCTTTCCATG 59.871 43.478 9.53 0.00 0.00 3.66
1519 1521 3.355378 TCGACCAATGCATTCTTTCCAT 58.645 40.909 9.53 0.00 0.00 3.41
1520 1522 2.789213 TCGACCAATGCATTCTTTCCA 58.211 42.857 9.53 0.00 0.00 3.53
1521 1523 3.129287 ACATCGACCAATGCATTCTTTCC 59.871 43.478 9.53 0.00 0.00 3.13
1522 1524 4.346129 GACATCGACCAATGCATTCTTTC 58.654 43.478 9.53 5.24 0.00 2.62
1523 1525 3.181507 CGACATCGACCAATGCATTCTTT 60.182 43.478 9.53 0.00 43.02 2.52
1524 1526 2.352651 CGACATCGACCAATGCATTCTT 59.647 45.455 9.53 0.00 43.02 2.52
1525 1527 1.935873 CGACATCGACCAATGCATTCT 59.064 47.619 9.53 0.00 43.02 2.40
1526 1528 1.933181 TCGACATCGACCAATGCATTC 59.067 47.619 9.53 0.00 44.22 2.67
1527 1529 1.935873 CTCGACATCGACCAATGCATT 59.064 47.619 5.99 5.99 44.22 3.56
1528 1530 1.134699 ACTCGACATCGACCAATGCAT 60.135 47.619 0.00 0.00 44.22 3.96
1529 1531 0.246360 ACTCGACATCGACCAATGCA 59.754 50.000 0.00 0.00 44.22 3.96
1530 1532 0.924090 GACTCGACATCGACCAATGC 59.076 55.000 0.00 0.00 44.22 3.56
1531 1533 2.188524 CTGACTCGACATCGACCAATG 58.811 52.381 0.00 0.00 44.22 2.82
1532 1534 1.135139 CCTGACTCGACATCGACCAAT 59.865 52.381 0.00 0.00 44.22 3.16
1533 1535 0.526211 CCTGACTCGACATCGACCAA 59.474 55.000 0.00 0.00 44.22 3.67
1534 1536 1.313091 CCCTGACTCGACATCGACCA 61.313 60.000 0.00 1.17 44.22 4.02
1535 1537 1.313812 ACCCTGACTCGACATCGACC 61.314 60.000 0.00 0.00 44.22 4.79
1536 1538 1.331138 CTACCCTGACTCGACATCGAC 59.669 57.143 0.00 0.00 44.22 4.20
1538 1540 0.029567 GCTACCCTGACTCGACATCG 59.970 60.000 0.00 0.00 41.45 3.84
1539 1541 0.386113 GGCTACCCTGACTCGACATC 59.614 60.000 0.00 0.00 0.00 3.06
1540 1542 1.384989 CGGCTACCCTGACTCGACAT 61.385 60.000 0.00 0.00 0.00 3.06
1541 1543 2.044555 CGGCTACCCTGACTCGACA 61.045 63.158 0.00 0.00 0.00 4.35
1542 1544 2.772691 CCGGCTACCCTGACTCGAC 61.773 68.421 0.00 0.00 0.00 4.20
1543 1545 2.439701 CCGGCTACCCTGACTCGA 60.440 66.667 0.00 0.00 0.00 4.04
1544 1546 2.754658 ACCGGCTACCCTGACTCG 60.755 66.667 0.00 0.00 0.00 4.18
1545 1547 1.946475 GACACCGGCTACCCTGACTC 61.946 65.000 0.00 0.00 0.00 3.36
1546 1548 1.982938 GACACCGGCTACCCTGACT 60.983 63.158 0.00 0.00 0.00 3.41
1547 1549 2.577593 GACACCGGCTACCCTGAC 59.422 66.667 0.00 0.00 0.00 3.51
1548 1550 3.066190 CGACACCGGCTACCCTGA 61.066 66.667 0.00 0.00 0.00 3.86
1549 1551 3.064987 CTCGACACCGGCTACCCTG 62.065 68.421 0.00 0.00 36.24 4.45
1550 1552 2.202236 TACTCGACACCGGCTACCCT 62.202 60.000 0.00 0.00 36.24 4.34
1551 1553 1.315257 TTACTCGACACCGGCTACCC 61.315 60.000 0.00 0.00 36.24 3.69
1552 1554 0.100146 CTTACTCGACACCGGCTACC 59.900 60.000 0.00 0.00 36.24 3.18
1553 1555 0.525029 GCTTACTCGACACCGGCTAC 60.525 60.000 0.00 0.00 36.24 3.58
1554 1556 1.660560 GGCTTACTCGACACCGGCTA 61.661 60.000 0.00 0.00 36.24 3.93
1555 1557 2.572284 GCTTACTCGACACCGGCT 59.428 61.111 0.00 0.00 36.24 5.52
1556 1558 2.508663 GGCTTACTCGACACCGGC 60.509 66.667 0.00 0.00 36.24 6.13
1557 1559 2.202570 CGGCTTACTCGACACCGG 60.203 66.667 0.00 0.00 40.18 5.28
1558 1560 2.879462 GCGGCTTACTCGACACCG 60.879 66.667 0.00 0.00 46.50 4.94
1559 1561 2.508663 GGCGGCTTACTCGACACC 60.509 66.667 0.00 0.00 35.41 4.16
1560 1562 2.260434 TGGCGGCTTACTCGACAC 59.740 61.111 11.43 0.00 41.09 3.67
1562 1564 1.883084 CCATGGCGGCTTACTCGAC 60.883 63.158 11.43 0.00 35.97 4.20
1563 1565 2.355986 ACCATGGCGGCTTACTCGA 61.356 57.895 13.04 0.00 39.03 4.04
1564 1566 2.173669 CACCATGGCGGCTTACTCG 61.174 63.158 13.04 0.00 39.03 4.18
1565 1567 2.472909 GCACCATGGCGGCTTACTC 61.473 63.158 19.00 0.00 39.03 2.59
1566 1568 2.438434 GCACCATGGCGGCTTACT 60.438 61.111 19.00 0.00 39.03 2.24
1567 1569 3.518068 GGCACCATGGCGGCTTAC 61.518 66.667 23.62 8.09 39.03 2.34
1590 1592 2.501223 TAACTCGGTGCCTCCTTGCG 62.501 60.000 0.00 0.00 0.00 4.85
1591 1593 0.741221 CTAACTCGGTGCCTCCTTGC 60.741 60.000 0.00 0.00 0.00 4.01
1592 1594 0.608640 ACTAACTCGGTGCCTCCTTG 59.391 55.000 0.00 0.00 0.00 3.61
1593 1595 0.896226 GACTAACTCGGTGCCTCCTT 59.104 55.000 0.00 0.00 0.00 3.36
1594 1596 0.251653 TGACTAACTCGGTGCCTCCT 60.252 55.000 0.00 0.00 0.00 3.69
1595 1597 0.824759 ATGACTAACTCGGTGCCTCC 59.175 55.000 0.00 0.00 0.00 4.30
1596 1598 1.471676 CCATGACTAACTCGGTGCCTC 60.472 57.143 0.00 0.00 0.00 4.70
1597 1599 0.537188 CCATGACTAACTCGGTGCCT 59.463 55.000 0.00 0.00 0.00 4.75
1598 1600 0.462047 CCCATGACTAACTCGGTGCC 60.462 60.000 0.00 0.00 0.00 5.01
1599 1601 1.090052 GCCCATGACTAACTCGGTGC 61.090 60.000 0.00 0.00 0.00 5.01
1600 1602 0.249120 TGCCCATGACTAACTCGGTG 59.751 55.000 0.00 0.00 0.00 4.94
1601 1603 0.249398 GTGCCCATGACTAACTCGGT 59.751 55.000 0.00 0.00 0.00 4.69
1602 1604 0.249120 TGTGCCCATGACTAACTCGG 59.751 55.000 0.00 0.00 0.00 4.63
1603 1605 1.066858 ACTGTGCCCATGACTAACTCG 60.067 52.381 0.00 0.00 0.00 4.18
1604 1606 2.350522 CACTGTGCCCATGACTAACTC 58.649 52.381 0.00 0.00 0.00 3.01
1605 1607 1.003580 CCACTGTGCCCATGACTAACT 59.996 52.381 1.29 0.00 0.00 2.24
1606 1608 1.271379 ACCACTGTGCCCATGACTAAC 60.271 52.381 1.29 0.00 0.00 2.34
1607 1609 1.064003 ACCACTGTGCCCATGACTAA 58.936 50.000 1.29 0.00 0.00 2.24
1608 1610 0.324614 CACCACTGTGCCCATGACTA 59.675 55.000 1.29 0.00 35.31 2.59
1609 1611 1.073722 CACCACTGTGCCCATGACT 59.926 57.895 1.29 0.00 35.31 3.41
1610 1612 1.228245 ACACCACTGTGCCCATGAC 60.228 57.895 1.29 0.00 46.86 3.06
1611 1613 1.073025 GACACCACTGTGCCCATGA 59.927 57.895 1.29 0.00 46.86 3.07
1612 1614 2.327343 CGACACCACTGTGCCCATG 61.327 63.158 1.29 0.54 46.86 3.66
1613 1615 2.032528 CGACACCACTGTGCCCAT 59.967 61.111 1.29 0.00 46.86 4.00
1614 1616 2.258748 TTTCGACACCACTGTGCCCA 62.259 55.000 1.29 0.00 46.86 5.36
1615 1617 0.889186 ATTTCGACACCACTGTGCCC 60.889 55.000 1.29 0.00 46.86 5.36
1616 1618 1.732259 CTATTTCGACACCACTGTGCC 59.268 52.381 1.29 0.00 46.86 5.01
1617 1619 2.157668 CACTATTTCGACACCACTGTGC 59.842 50.000 1.29 0.00 46.86 4.57
1619 1621 2.367567 ACCACTATTTCGACACCACTGT 59.632 45.455 0.00 0.00 0.00 3.55
1620 1622 2.736721 CACCACTATTTCGACACCACTG 59.263 50.000 0.00 0.00 0.00 3.66
1621 1623 2.870435 GCACCACTATTTCGACACCACT 60.870 50.000 0.00 0.00 0.00 4.00
1622 1624 1.463444 GCACCACTATTTCGACACCAC 59.537 52.381 0.00 0.00 0.00 4.16
1623 1625 1.803334 GCACCACTATTTCGACACCA 58.197 50.000 0.00 0.00 0.00 4.17
1624 1626 0.719465 CGCACCACTATTTCGACACC 59.281 55.000 0.00 0.00 0.00 4.16
1625 1627 0.094730 GCGCACCACTATTTCGACAC 59.905 55.000 0.30 0.00 0.00 3.67
1626 1628 1.017177 GGCGCACCACTATTTCGACA 61.017 55.000 10.83 0.00 35.26 4.35
1627 1629 1.017177 TGGCGCACCACTATTTCGAC 61.017 55.000 10.83 0.00 42.67 4.20
1628 1630 0.739462 CTGGCGCACCACTATTTCGA 60.739 55.000 10.83 0.00 42.67 3.71
1629 1631 1.705337 CCTGGCGCACCACTATTTCG 61.705 60.000 10.83 0.00 42.67 3.46
1630 1632 0.392461 TCCTGGCGCACCACTATTTC 60.392 55.000 10.83 0.00 42.67 2.17
1631 1633 0.037590 TTCCTGGCGCACCACTATTT 59.962 50.000 10.83 0.00 42.67 1.40
1632 1634 0.392998 CTTCCTGGCGCACCACTATT 60.393 55.000 10.83 0.00 42.67 1.73
1633 1635 1.221840 CTTCCTGGCGCACCACTAT 59.778 57.895 10.83 0.00 42.67 2.12
1634 1636 1.476845 TTCTTCCTGGCGCACCACTA 61.477 55.000 10.83 0.00 42.67 2.74
1635 1637 2.738213 CTTCTTCCTGGCGCACCACT 62.738 60.000 10.83 0.00 42.67 4.00
1636 1638 2.281484 TTCTTCCTGGCGCACCAC 60.281 61.111 10.83 0.00 42.67 4.16
1637 1639 2.032528 CTTCTTCCTGGCGCACCA 59.967 61.111 10.83 0.00 46.51 4.17
1638 1640 2.035442 GTCTTCTTCCTGGCGCACC 61.035 63.158 10.83 0.00 0.00 5.01
1639 1641 2.383527 CGTCTTCTTCCTGGCGCAC 61.384 63.158 10.83 0.00 0.00 5.34
1640 1642 2.048222 CGTCTTCTTCCTGGCGCA 60.048 61.111 10.83 0.00 0.00 6.09
1641 1643 1.668151 AACGTCTTCTTCCTGGCGC 60.668 57.895 0.00 0.00 0.00 6.53
1642 1644 0.600255 ACAACGTCTTCTTCCTGGCG 60.600 55.000 0.00 0.00 0.00 5.69
1643 1645 1.264288 CAACAACGTCTTCTTCCTGGC 59.736 52.381 0.00 0.00 0.00 4.85
1644 1646 2.833794 TCAACAACGTCTTCTTCCTGG 58.166 47.619 0.00 0.00 0.00 4.45
1645 1647 4.058124 TCATCAACAACGTCTTCTTCCTG 58.942 43.478 0.00 0.00 0.00 3.86
1646 1648 4.310769 CTCATCAACAACGTCTTCTTCCT 58.689 43.478 0.00 0.00 0.00 3.36
1647 1649 3.433615 CCTCATCAACAACGTCTTCTTCC 59.566 47.826 0.00 0.00 0.00 3.46
1648 1650 3.120511 GCCTCATCAACAACGTCTTCTTC 60.121 47.826 0.00 0.00 0.00 2.87
1649 1651 2.808543 GCCTCATCAACAACGTCTTCTT 59.191 45.455 0.00 0.00 0.00 2.52
1650 1652 2.417719 GCCTCATCAACAACGTCTTCT 58.582 47.619 0.00 0.00 0.00 2.85
1651 1653 1.126846 CGCCTCATCAACAACGTCTTC 59.873 52.381 0.00 0.00 0.00 2.87
1652 1654 1.148310 CGCCTCATCAACAACGTCTT 58.852 50.000 0.00 0.00 0.00 3.01
1653 1655 1.291877 GCGCCTCATCAACAACGTCT 61.292 55.000 0.00 0.00 0.00 4.18
1654 1656 1.132640 GCGCCTCATCAACAACGTC 59.867 57.895 0.00 0.00 0.00 4.34
1655 1657 1.596752 TGCGCCTCATCAACAACGT 60.597 52.632 4.18 0.00 0.00 3.99
1656 1658 1.154413 GTGCGCCTCATCAACAACG 60.154 57.895 4.18 0.00 0.00 4.10
1657 1659 0.593128 AAGTGCGCCTCATCAACAAC 59.407 50.000 4.18 0.00 0.00 3.32
1658 1660 0.592637 CAAGTGCGCCTCATCAACAA 59.407 50.000 4.18 0.00 0.00 2.83
1659 1661 0.534877 ACAAGTGCGCCTCATCAACA 60.535 50.000 4.18 0.00 0.00 3.33
1660 1662 1.394917 CTACAAGTGCGCCTCATCAAC 59.605 52.381 4.18 0.00 0.00 3.18
1661 1663 1.275010 TCTACAAGTGCGCCTCATCAA 59.725 47.619 4.18 0.00 0.00 2.57
1662 1664 0.894835 TCTACAAGTGCGCCTCATCA 59.105 50.000 4.18 0.00 0.00 3.07
1663 1665 2.010145 TTCTACAAGTGCGCCTCATC 57.990 50.000 4.18 0.00 0.00 2.92
1664 1666 2.472695 TTTCTACAAGTGCGCCTCAT 57.527 45.000 4.18 0.00 0.00 2.90
1665 1667 2.143122 CTTTTCTACAAGTGCGCCTCA 58.857 47.619 4.18 0.00 0.00 3.86
1666 1668 2.413453 CTCTTTTCTACAAGTGCGCCTC 59.587 50.000 4.18 0.00 0.00 4.70
1667 1669 2.417719 CTCTTTTCTACAAGTGCGCCT 58.582 47.619 4.18 0.00 0.00 5.52
1671 1673 2.784347 AGCCCTCTTTTCTACAAGTGC 58.216 47.619 0.00 0.00 0.00 4.40
1676 1678 3.394606 AGACCAAAGCCCTCTTTTCTACA 59.605 43.478 0.00 0.00 40.35 2.74
1718 1720 0.395312 GTTCTGGACTGAACCGGGAA 59.605 55.000 6.32 0.00 40.10 3.97
1749 1751 1.912971 GAACCGGGACTAATGCCCT 59.087 57.895 6.32 0.00 43.72 5.19
1796 1799 2.484203 GTCGAGACGAACCGGGAG 59.516 66.667 6.32 0.00 37.72 4.30
1810 1813 2.224450 ACCAAGTGGGACTAAAAGGTCG 60.224 50.000 1.69 0.00 41.15 4.79
1825 1828 2.590575 CGGTTCGTGGCACCAAGT 60.591 61.111 12.86 0.00 33.36 3.16
1826 1829 3.353836 CCGGTTCGTGGCACCAAG 61.354 66.667 12.86 0.00 33.36 3.61
1982 1985 8.170730 AGAGTTTGAAAATGGGACCTTTAGTAT 58.829 33.333 0.00 0.00 0.00 2.12
2156 2175 7.993183 TGCCCATTTTACTAAATTCTAGAGAGG 59.007 37.037 0.00 0.00 31.63 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.