Multiple sequence alignment - TraesCS5B01G467600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G467600 chr5B 100.000 2643 0 0 1 2643 641300954 641298312 0.000000e+00 4881.0
1 TraesCS5B01G467600 chr5B 89.335 2091 163 26 1 2075 470216905 470218951 0.000000e+00 2571.0
2 TraesCS5B01G467600 chr5B 88.517 2064 179 25 1 2044 407222197 407224222 0.000000e+00 2446.0
3 TraesCS5B01G467600 chr6D 90.892 2086 159 13 1 2072 450905611 450907679 0.000000e+00 2771.0
4 TraesCS5B01G467600 chr6D 89.151 212 23 0 2132 2343 311650032 311650243 5.610000e-67 265.0
5 TraesCS5B01G467600 chr6D 88.785 214 23 1 2132 2345 337621777 337621989 7.260000e-66 261.0
6 TraesCS5B01G467600 chr6D 88.710 62 6 1 2073 2134 119536704 119536764 1.010000e-09 75.0
7 TraesCS5B01G467600 chr4B 90.640 2094 162 15 1 2072 551784356 551786437 0.000000e+00 2750.0
8 TraesCS5B01G467600 chr4B 90.444 2093 167 14 1 2072 551729749 551731829 0.000000e+00 2726.0
9 TraesCS5B01G467600 chr4B 90.323 62 6 0 2073 2134 189679816 189679877 6.060000e-12 82.4
10 TraesCS5B01G467600 chr7D 90.540 2093 173 12 1 2072 463976193 463974105 0.000000e+00 2745.0
11 TraesCS5B01G467600 chr7D 88.995 2090 191 20 1 2073 432740889 432738822 0.000000e+00 2549.0
12 TraesCS5B01G467600 chr7D 83.333 420 50 10 1 411 188565072 188564664 1.160000e-98 370.0
13 TraesCS5B01G467600 chr7D 89.151 212 23 0 2132 2343 180483990 180484201 5.610000e-67 265.0
14 TraesCS5B01G467600 chr7B 90.631 2092 156 18 3 2072 150841755 150843828 0.000000e+00 2741.0
15 TraesCS5B01G467600 chr7B 95.374 281 9 2 2073 2350 538342118 538341839 6.710000e-121 444.0
16 TraesCS5B01G467600 chr6B 90.330 2120 140 20 1 2070 189103173 189105277 0.000000e+00 2719.0
17 TraesCS5B01G467600 chr6B 88.710 62 6 1 2073 2134 551107212 551107152 1.010000e-09 75.0
18 TraesCS5B01G467600 chr3A 89.522 2090 169 20 1 2072 418765995 418763938 0.000000e+00 2601.0
19 TraesCS5B01G467600 chr4D 89.048 2091 180 24 1 2075 493971444 493969387 0.000000e+00 2547.0
20 TraesCS5B01G467600 chr4D 88.463 2089 190 27 3 2069 48684277 48682218 0.000000e+00 2475.0
21 TraesCS5B01G467600 chr4D 88.128 219 23 3 2132 2349 110805373 110805157 9.390000e-65 257.0
22 TraesCS5B01G467600 chr4D 87.302 63 7 1 2073 2134 86918343 86918405 1.310000e-08 71.3
23 TraesCS5B01G467600 chr3B 88.586 2094 184 23 1 2075 478551301 478549244 0.000000e+00 2492.0
24 TraesCS5B01G467600 chr7A 86.788 1983 201 27 1 1938 620203194 620205160 0.000000e+00 2154.0
25 TraesCS5B01G467600 chr2D 86.700 406 39 8 1 394 618295344 618295746 1.120000e-118 436.0
26 TraesCS5B01G467600 chr2D 88.785 214 23 1 2132 2345 140370006 140370218 7.260000e-66 261.0
27 TraesCS5B01G467600 chr2B 91.121 214 17 1 2132 2343 116348336 116348123 3.330000e-74 289.0
28 TraesCS5B01G467600 chr2B 95.161 62 2 1 2073 2134 116348436 116348376 2.170000e-16 97.1
29 TraesCS5B01G467600 chr3D 91.080 213 17 2 2132 2343 134760342 134760131 1.200000e-73 287.0
30 TraesCS5B01G467600 chr3D 88.710 62 7 0 2073 2134 309458034 309457973 2.820000e-10 76.8
31 TraesCS5B01G467600 chr5D 88.073 218 25 1 2132 2349 72765579 72765363 9.390000e-65 257.0
32 TraesCS5B01G467600 chr5D 88.710 62 6 1 2073 2134 297430600 297430540 1.010000e-09 75.0
33 TraesCS5B01G467600 chr5D 87.097 62 7 1 2073 2134 363673094 363673154 4.720000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G467600 chr5B 641298312 641300954 2642 True 4881 4881 100.000 1 2643 1 chr5B.!!$R1 2642
1 TraesCS5B01G467600 chr5B 470216905 470218951 2046 False 2571 2571 89.335 1 2075 1 chr5B.!!$F2 2074
2 TraesCS5B01G467600 chr5B 407222197 407224222 2025 False 2446 2446 88.517 1 2044 1 chr5B.!!$F1 2043
3 TraesCS5B01G467600 chr6D 450905611 450907679 2068 False 2771 2771 90.892 1 2072 1 chr6D.!!$F4 2071
4 TraesCS5B01G467600 chr4B 551784356 551786437 2081 False 2750 2750 90.640 1 2072 1 chr4B.!!$F3 2071
5 TraesCS5B01G467600 chr4B 551729749 551731829 2080 False 2726 2726 90.444 1 2072 1 chr4B.!!$F2 2071
6 TraesCS5B01G467600 chr7D 463974105 463976193 2088 True 2745 2745 90.540 1 2072 1 chr7D.!!$R3 2071
7 TraesCS5B01G467600 chr7D 432738822 432740889 2067 True 2549 2549 88.995 1 2073 1 chr7D.!!$R2 2072
8 TraesCS5B01G467600 chr7B 150841755 150843828 2073 False 2741 2741 90.631 3 2072 1 chr7B.!!$F1 2069
9 TraesCS5B01G467600 chr6B 189103173 189105277 2104 False 2719 2719 90.330 1 2070 1 chr6B.!!$F1 2069
10 TraesCS5B01G467600 chr3A 418763938 418765995 2057 True 2601 2601 89.522 1 2072 1 chr3A.!!$R1 2071
11 TraesCS5B01G467600 chr4D 493969387 493971444 2057 True 2547 2547 89.048 1 2075 1 chr4D.!!$R3 2074
12 TraesCS5B01G467600 chr4D 48682218 48684277 2059 True 2475 2475 88.463 3 2069 1 chr4D.!!$R1 2066
13 TraesCS5B01G467600 chr3B 478549244 478551301 2057 True 2492 2492 88.586 1 2075 1 chr3B.!!$R1 2074
14 TraesCS5B01G467600 chr7A 620203194 620205160 1966 False 2154 2154 86.788 1 1938 1 chr7A.!!$F1 1937

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
299 436 0.269782 GTAGTAGGGGGATTGGGGGA 59.730 60.0 0.0 0.0 0.0 4.81 F
301 438 0.354199 AGTAGGGGGATTGGGGGATT 59.646 55.0 0.0 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1154 1343 0.035915 TCGTCGGGCATTGGATGAAA 60.036 50.0 0.0 0.0 0.00 2.69 R
2137 2352 0.168788 CGTGTTGCCACATGACCATC 59.831 55.0 4.1 0.0 41.91 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 24 1.613925 CACTCTCCAAACTCTCACCGA 59.386 52.381 0.00 0.00 0.00 4.69
94 98 1.527844 GATCATCACCTGGCCAGCC 60.528 63.158 28.39 0.38 0.00 4.85
209 215 5.721960 GGGGAATAGAGGTAGATAAGCATGA 59.278 44.000 0.00 0.00 0.00 3.07
212 233 7.256332 GGGAATAGAGGTAGATAAGCATGACAA 60.256 40.741 0.00 0.00 0.00 3.18
284 405 1.755380 GGTAGATGCGGTTGGAGTAGT 59.245 52.381 0.00 0.00 0.00 2.73
297 434 1.730851 GAGTAGTAGGGGGATTGGGG 58.269 60.000 0.00 0.00 0.00 4.96
298 435 0.271005 AGTAGTAGGGGGATTGGGGG 59.729 60.000 0.00 0.00 0.00 5.40
299 436 0.269782 GTAGTAGGGGGATTGGGGGA 59.730 60.000 0.00 0.00 0.00 4.81
300 437 1.132168 GTAGTAGGGGGATTGGGGGAT 60.132 57.143 0.00 0.00 0.00 3.85
301 438 0.354199 AGTAGGGGGATTGGGGGATT 59.646 55.000 0.00 0.00 0.00 3.01
302 439 0.482887 GTAGGGGGATTGGGGGATTG 59.517 60.000 0.00 0.00 0.00 2.67
303 440 0.704461 TAGGGGGATTGGGGGATTGG 60.704 60.000 0.00 0.00 0.00 3.16
304 441 2.614595 GGGGATTGGGGGATTGGG 59.385 66.667 0.00 0.00 0.00 4.12
311 456 0.780494 TTGGGGGATTGGGGGTACAA 60.780 55.000 0.00 0.00 34.41 2.41
318 463 3.565670 GGGATTGGGGGTACAAAACAGAT 60.566 47.826 0.00 0.00 33.48 2.90
320 465 5.454966 GGATTGGGGGTACAAAACAGATAT 58.545 41.667 0.00 0.00 33.48 1.63
378 550 2.435586 CGAGTGGCTGGCCTTCAG 60.436 66.667 13.05 0.00 46.03 3.02
395 567 1.002430 TCAGCTTCTTGTTCATCGCCT 59.998 47.619 0.00 0.00 0.00 5.52
431 603 2.100603 CGTCTTCGTCCTCGGCTC 59.899 66.667 0.00 0.00 37.69 4.70
436 608 1.587043 CTTCGTCCTCGGCTCAGTCA 61.587 60.000 0.00 0.00 37.69 3.41
464 636 3.851128 GCCAGGTAGGACGGCCTC 61.851 72.222 16.98 5.45 45.54 4.70
466 638 2.439701 CAGGTAGGACGGCCTCGA 60.440 66.667 16.98 0.00 45.54 4.04
502 674 0.389817 TCATCTGCACCGGTTCTTCG 60.390 55.000 2.97 0.00 0.00 3.79
590 765 0.683504 ACGACGGTCATTAGGAGCCT 60.684 55.000 9.10 0.00 40.99 4.58
612 787 2.492484 AGTAGCTCTTGTACTTGGACCG 59.508 50.000 0.00 0.00 0.00 4.79
726 902 2.297315 TCATCGTCTTCAGCTCTTGTGT 59.703 45.455 0.00 0.00 0.00 3.72
871 1048 1.363530 CCCTCCAGCCAATACCCCAT 61.364 60.000 0.00 0.00 0.00 4.00
945 1128 6.672593 AGATTGATAGTGAGAGAAGAGAGGT 58.327 40.000 0.00 0.00 0.00 3.85
957 1141 3.264450 AGAAGAGAGGTGGTGGGTAAATG 59.736 47.826 0.00 0.00 0.00 2.32
961 1145 1.353022 GAGGTGGTGGGTAAATGGTGA 59.647 52.381 0.00 0.00 0.00 4.02
1011 1200 1.822371 GGAGAGGAGGAAGAGTGACAC 59.178 57.143 0.00 0.00 0.00 3.67
1023 1212 3.482722 GAGTGACACTCATGCCATTTG 57.517 47.619 27.15 0.00 44.45 2.32
1058 1247 6.946340 TCTTCAATAAGCCATGAACTCTGTA 58.054 36.000 0.00 0.00 32.46 2.74
1273 1470 1.890041 AACAAGCGCCGCAACTACA 60.890 52.632 13.36 0.00 0.00 2.74
1315 1512 1.815408 GCCCAACTCACTTCTGCAAGA 60.815 52.381 0.00 0.00 44.68 3.02
1338 1535 1.032014 TCCTTGCACCAAAGCTTGAC 58.968 50.000 0.00 0.00 34.99 3.18
1540 1740 1.412710 TGACGTTCAAGCTCCTCACTT 59.587 47.619 0.00 0.00 0.00 3.16
1541 1741 1.795286 GACGTTCAAGCTCCTCACTTG 59.205 52.381 0.00 0.00 44.76 3.16
1680 1881 9.469807 CTAATTACTATCGAGTCTGCTTTGAAT 57.530 33.333 0.00 0.00 37.10 2.57
1790 2004 3.055602 TCTGCTCTGCTTATGATGTGTGT 60.056 43.478 0.00 0.00 0.00 3.72
1853 2067 2.925724 CCAAAGAGGTTACCACACACA 58.074 47.619 3.51 0.00 0.00 3.72
1970 2185 1.194218 GGGCATGTAGGCAACCAAAT 58.806 50.000 0.00 0.00 46.44 2.32
2038 2253 3.944015 GAGTTGAGAAGGCTATGCAATGT 59.056 43.478 0.00 0.00 0.00 2.71
2075 2290 0.386113 GCAACCAAACACGCCCTTAA 59.614 50.000 0.00 0.00 0.00 1.85
2076 2291 1.202428 GCAACCAAACACGCCCTTAAA 60.202 47.619 0.00 0.00 0.00 1.52
2077 2292 2.738964 GCAACCAAACACGCCCTTAAAA 60.739 45.455 0.00 0.00 0.00 1.52
2078 2293 3.522553 CAACCAAACACGCCCTTAAAAA 58.477 40.909 0.00 0.00 0.00 1.94
2079 2294 3.446310 ACCAAACACGCCCTTAAAAAG 57.554 42.857 0.00 0.00 0.00 2.27
2080 2295 3.025262 ACCAAACACGCCCTTAAAAAGA 58.975 40.909 0.00 0.00 0.00 2.52
2081 2296 3.447944 ACCAAACACGCCCTTAAAAAGAA 59.552 39.130 0.00 0.00 0.00 2.52
2082 2297 3.799963 CCAAACACGCCCTTAAAAAGAAC 59.200 43.478 0.00 0.00 0.00 3.01
2083 2298 4.440940 CCAAACACGCCCTTAAAAAGAACT 60.441 41.667 0.00 0.00 0.00 3.01
2084 2299 3.982576 ACACGCCCTTAAAAAGAACTG 57.017 42.857 0.00 0.00 0.00 3.16
2085 2300 2.034179 ACACGCCCTTAAAAAGAACTGC 59.966 45.455 0.00 0.00 0.00 4.40
2086 2301 2.034053 CACGCCCTTAAAAAGAACTGCA 59.966 45.455 0.00 0.00 0.00 4.41
2087 2302 2.890945 ACGCCCTTAAAAAGAACTGCAT 59.109 40.909 0.00 0.00 0.00 3.96
2088 2303 3.244976 CGCCCTTAAAAAGAACTGCATG 58.755 45.455 0.00 0.00 0.00 4.06
2089 2304 3.305335 CGCCCTTAAAAAGAACTGCATGT 60.305 43.478 0.00 0.00 0.00 3.21
2090 2305 4.631131 GCCCTTAAAAAGAACTGCATGTT 58.369 39.130 0.00 1.82 42.38 2.71
2091 2306 4.448732 GCCCTTAAAAAGAACTGCATGTTG 59.551 41.667 6.31 0.00 39.30 3.33
2092 2307 4.448732 CCCTTAAAAAGAACTGCATGTTGC 59.551 41.667 6.31 0.00 45.29 4.17
2093 2308 5.291971 CCTTAAAAAGAACTGCATGTTGCT 58.708 37.500 6.31 2.31 45.31 3.91
2094 2309 5.754890 CCTTAAAAAGAACTGCATGTTGCTT 59.245 36.000 6.31 6.94 45.31 3.91
2095 2310 6.074142 CCTTAAAAAGAACTGCATGTTGCTTC 60.074 38.462 6.31 0.00 45.31 3.86
2096 2311 4.389890 AAAAGAACTGCATGTTGCTTCA 57.610 36.364 6.31 0.00 45.31 3.02
2097 2312 3.360249 AAGAACTGCATGTTGCTTCAC 57.640 42.857 6.31 0.00 45.31 3.18
2098 2313 2.579873 AGAACTGCATGTTGCTTCACT 58.420 42.857 6.31 0.00 45.31 3.41
2099 2314 2.954318 AGAACTGCATGTTGCTTCACTT 59.046 40.909 6.31 0.00 45.31 3.16
2100 2315 3.382546 AGAACTGCATGTTGCTTCACTTT 59.617 39.130 6.31 0.00 45.31 2.66
2101 2316 3.360249 ACTGCATGTTGCTTCACTTTC 57.640 42.857 0.75 0.00 45.31 2.62
2102 2317 2.954318 ACTGCATGTTGCTTCACTTTCT 59.046 40.909 0.75 0.00 45.31 2.52
2103 2318 3.004106 ACTGCATGTTGCTTCACTTTCTC 59.996 43.478 0.75 0.00 45.31 2.87
2104 2319 2.294233 TGCATGTTGCTTCACTTTCTCC 59.706 45.455 0.75 0.00 45.31 3.71
2105 2320 2.294233 GCATGTTGCTTCACTTTCTCCA 59.706 45.455 0.00 0.00 40.96 3.86
2106 2321 3.854784 GCATGTTGCTTCACTTTCTCCAC 60.855 47.826 0.00 0.00 40.96 4.02
2107 2322 2.997980 TGTTGCTTCACTTTCTCCACA 58.002 42.857 0.00 0.00 0.00 4.17
2108 2323 3.554934 TGTTGCTTCACTTTCTCCACAT 58.445 40.909 0.00 0.00 0.00 3.21
2109 2324 3.565482 TGTTGCTTCACTTTCTCCACATC 59.435 43.478 0.00 0.00 0.00 3.06
2110 2325 2.783135 TGCTTCACTTTCTCCACATCC 58.217 47.619 0.00 0.00 0.00 3.51
2111 2326 2.373169 TGCTTCACTTTCTCCACATCCT 59.627 45.455 0.00 0.00 0.00 3.24
2112 2327 3.006247 GCTTCACTTTCTCCACATCCTC 58.994 50.000 0.00 0.00 0.00 3.71
2113 2328 3.604582 CTTCACTTTCTCCACATCCTCC 58.395 50.000 0.00 0.00 0.00 4.30
2114 2329 1.909302 TCACTTTCTCCACATCCTCCC 59.091 52.381 0.00 0.00 0.00 4.30
2115 2330 1.912043 CACTTTCTCCACATCCTCCCT 59.088 52.381 0.00 0.00 0.00 4.20
2116 2331 2.307098 CACTTTCTCCACATCCTCCCTT 59.693 50.000 0.00 0.00 0.00 3.95
2117 2332 2.989571 ACTTTCTCCACATCCTCCCTTT 59.010 45.455 0.00 0.00 0.00 3.11
2118 2333 3.399305 ACTTTCTCCACATCCTCCCTTTT 59.601 43.478 0.00 0.00 0.00 2.27
2119 2334 4.140924 ACTTTCTCCACATCCTCCCTTTTT 60.141 41.667 0.00 0.00 0.00 1.94
2150 2365 1.315690 CCATCTGATGGTCATGTGGC 58.684 55.000 25.34 0.00 45.54 5.01
2151 2366 1.409101 CCATCTGATGGTCATGTGGCA 60.409 52.381 25.34 0.00 45.54 4.92
2152 2367 2.371306 CATCTGATGGTCATGTGGCAA 58.629 47.619 9.82 0.00 0.00 4.52
2153 2368 1.825090 TCTGATGGTCATGTGGCAAC 58.175 50.000 0.00 0.00 0.00 4.17
2164 2379 3.756802 TGGCAACACGACCCATTG 58.243 55.556 0.00 0.00 46.17 2.82
2165 2380 1.900981 TGGCAACACGACCCATTGG 60.901 57.895 0.00 0.00 46.17 3.16
2204 2419 2.791383 TTTTCTGGAAACGGCACATG 57.209 45.000 0.00 0.00 36.33 3.21
2205 2420 1.974265 TTTCTGGAAACGGCACATGA 58.026 45.000 0.00 0.00 36.33 3.07
2206 2421 2.198827 TTCTGGAAACGGCACATGAT 57.801 45.000 0.00 0.00 36.33 2.45
2207 2422 2.198827 TCTGGAAACGGCACATGATT 57.801 45.000 0.00 0.00 36.33 2.57
2208 2423 3.342377 TCTGGAAACGGCACATGATTA 57.658 42.857 0.00 0.00 36.33 1.75
2209 2424 3.884895 TCTGGAAACGGCACATGATTAT 58.115 40.909 0.00 0.00 36.33 1.28
2210 2425 4.269183 TCTGGAAACGGCACATGATTATT 58.731 39.130 0.00 0.00 36.33 1.40
2211 2426 4.335315 TCTGGAAACGGCACATGATTATTC 59.665 41.667 0.00 0.00 36.33 1.75
2212 2427 4.269183 TGGAAACGGCACATGATTATTCT 58.731 39.130 0.00 0.00 0.00 2.40
2213 2428 5.432645 TGGAAACGGCACATGATTATTCTA 58.567 37.500 0.00 0.00 0.00 2.10
2214 2429 5.527214 TGGAAACGGCACATGATTATTCTAG 59.473 40.000 0.00 0.00 0.00 2.43
2215 2430 5.758296 GGAAACGGCACATGATTATTCTAGA 59.242 40.000 0.00 0.00 0.00 2.43
2216 2431 6.260050 GGAAACGGCACATGATTATTCTAGAA 59.740 38.462 7.82 7.82 0.00 2.10
2217 2432 6.604735 AACGGCACATGATTATTCTAGAAC 57.395 37.500 7.48 0.00 0.00 3.01
2218 2433 5.670485 ACGGCACATGATTATTCTAGAACA 58.330 37.500 7.48 1.37 0.00 3.18
2219 2434 5.523916 ACGGCACATGATTATTCTAGAACAC 59.476 40.000 7.48 0.62 0.00 3.32
2220 2435 5.523552 CGGCACATGATTATTCTAGAACACA 59.476 40.000 7.48 6.29 0.00 3.72
2221 2436 6.292542 CGGCACATGATTATTCTAGAACACAG 60.293 42.308 7.48 1.14 0.00 3.66
2222 2437 6.540189 GGCACATGATTATTCTAGAACACAGT 59.460 38.462 7.48 1.73 0.00 3.55
2223 2438 7.710907 GGCACATGATTATTCTAGAACACAGTA 59.289 37.037 7.48 0.00 0.00 2.74
2224 2439 8.759641 GCACATGATTATTCTAGAACACAGTAG 58.240 37.037 7.48 0.00 0.00 2.57
2232 2447 7.646548 ATTCTAGAACACAGTAGATGTAGCA 57.353 36.000 7.48 0.00 41.41 3.49
2233 2448 6.685527 TCTAGAACACAGTAGATGTAGCAG 57.314 41.667 0.00 0.00 41.41 4.24
2234 2449 4.116747 AGAACACAGTAGATGTAGCAGC 57.883 45.455 0.00 0.00 41.41 5.25
2235 2450 3.511540 AGAACACAGTAGATGTAGCAGCA 59.488 43.478 0.00 0.00 41.41 4.41
2236 2451 3.516981 ACACAGTAGATGTAGCAGCAG 57.483 47.619 0.00 0.00 41.41 4.24
2237 2452 2.828520 ACACAGTAGATGTAGCAGCAGT 59.171 45.455 0.00 0.00 41.41 4.40
2238 2453 3.185330 CACAGTAGATGTAGCAGCAGTG 58.815 50.000 0.00 0.00 41.41 3.66
2239 2454 2.828520 ACAGTAGATGTAGCAGCAGTGT 59.171 45.455 0.00 0.00 41.60 3.55
2240 2455 4.017126 ACAGTAGATGTAGCAGCAGTGTA 58.983 43.478 0.00 0.00 41.60 2.90
2241 2456 4.142359 ACAGTAGATGTAGCAGCAGTGTAC 60.142 45.833 0.00 0.00 41.60 2.90
2242 2457 4.097135 CAGTAGATGTAGCAGCAGTGTACT 59.903 45.833 0.00 0.00 0.00 2.73
2243 2458 3.516981 AGATGTAGCAGCAGTGTACTG 57.483 47.619 7.64 7.64 46.40 2.74
2244 2459 2.828520 AGATGTAGCAGCAGTGTACTGT 59.171 45.455 13.08 0.00 45.45 3.55
2245 2460 3.259374 AGATGTAGCAGCAGTGTACTGTT 59.741 43.478 13.08 4.78 45.45 3.16
2246 2461 3.026630 TGTAGCAGCAGTGTACTGTTC 57.973 47.619 13.08 3.73 45.45 3.18
2247 2462 2.364002 TGTAGCAGCAGTGTACTGTTCA 59.636 45.455 13.08 0.00 45.45 3.18
2248 2463 2.847327 AGCAGCAGTGTACTGTTCAT 57.153 45.000 13.08 0.00 45.45 2.57
2249 2464 2.420642 AGCAGCAGTGTACTGTTCATG 58.579 47.619 13.08 8.48 45.45 3.07
2250 2465 1.135859 GCAGCAGTGTACTGTTCATGC 60.136 52.381 13.08 13.35 45.45 4.06
2251 2466 1.127397 CAGCAGTGTACTGTTCATGCG 59.873 52.381 13.08 7.25 45.45 4.73
2252 2467 1.000843 AGCAGTGTACTGTTCATGCGA 59.999 47.619 13.08 0.00 45.45 5.10
2253 2468 1.798223 GCAGTGTACTGTTCATGCGAA 59.202 47.619 13.08 0.00 45.45 4.70
2254 2469 2.416547 GCAGTGTACTGTTCATGCGAAT 59.583 45.455 13.08 0.00 45.45 3.34
2255 2470 3.484229 GCAGTGTACTGTTCATGCGAATC 60.484 47.826 13.08 0.00 45.45 2.52
2256 2471 3.928992 CAGTGTACTGTTCATGCGAATCT 59.071 43.478 3.88 0.00 39.09 2.40
2257 2472 4.389992 CAGTGTACTGTTCATGCGAATCTT 59.610 41.667 3.88 0.00 39.09 2.40
2258 2473 4.389992 AGTGTACTGTTCATGCGAATCTTG 59.610 41.667 0.00 0.00 32.61 3.02
2259 2474 2.907910 ACTGTTCATGCGAATCTTGC 57.092 45.000 0.00 0.00 32.61 4.01
2260 2475 2.430465 ACTGTTCATGCGAATCTTGCT 58.570 42.857 0.00 0.00 32.61 3.91
2261 2476 2.161012 ACTGTTCATGCGAATCTTGCTG 59.839 45.455 0.00 0.00 32.61 4.41
2262 2477 2.417586 CTGTTCATGCGAATCTTGCTGA 59.582 45.455 0.00 0.00 32.61 4.26
2263 2478 3.011818 TGTTCATGCGAATCTTGCTGAT 58.988 40.909 0.00 0.00 36.89 2.90
2264 2479 4.190772 TGTTCATGCGAATCTTGCTGATA 58.809 39.130 0.00 0.00 34.45 2.15
2265 2480 4.818005 TGTTCATGCGAATCTTGCTGATAT 59.182 37.500 0.00 0.00 34.45 1.63
2266 2481 5.297527 TGTTCATGCGAATCTTGCTGATATT 59.702 36.000 0.00 0.00 34.45 1.28
2267 2482 5.352643 TCATGCGAATCTTGCTGATATTG 57.647 39.130 0.00 0.00 34.45 1.90
2268 2483 4.214758 TCATGCGAATCTTGCTGATATTGG 59.785 41.667 0.00 0.00 34.45 3.16
2269 2484 2.291465 TGCGAATCTTGCTGATATTGGC 59.709 45.455 0.00 0.00 35.62 4.52
2270 2485 2.351157 GCGAATCTTGCTGATATTGGCC 60.351 50.000 0.00 0.00 34.45 5.36
2271 2486 2.227388 CGAATCTTGCTGATATTGGCCC 59.773 50.000 0.00 0.00 34.45 5.80
2272 2487 3.494332 GAATCTTGCTGATATTGGCCCT 58.506 45.455 0.00 0.00 34.45 5.19
2273 2488 3.607490 ATCTTGCTGATATTGGCCCTT 57.393 42.857 0.00 0.00 32.79 3.95
2274 2489 2.658285 TCTTGCTGATATTGGCCCTTG 58.342 47.619 0.00 0.00 0.00 3.61
2275 2490 1.684983 CTTGCTGATATTGGCCCTTGG 59.315 52.381 0.00 0.00 0.00 3.61
2276 2491 0.925558 TGCTGATATTGGCCCTTGGA 59.074 50.000 0.00 0.00 0.00 3.53
2277 2492 1.500303 TGCTGATATTGGCCCTTGGAT 59.500 47.619 0.00 0.00 0.00 3.41
2278 2493 2.091166 TGCTGATATTGGCCCTTGGATT 60.091 45.455 0.00 0.00 0.00 3.01
2279 2494 2.967887 GCTGATATTGGCCCTTGGATTT 59.032 45.455 0.00 0.00 0.00 2.17
2280 2495 4.151883 GCTGATATTGGCCCTTGGATTTA 58.848 43.478 0.00 0.00 0.00 1.40
2281 2496 4.588528 GCTGATATTGGCCCTTGGATTTAA 59.411 41.667 0.00 0.00 0.00 1.52
2282 2497 5.070313 GCTGATATTGGCCCTTGGATTTAAA 59.930 40.000 0.00 0.00 0.00 1.52
2283 2498 6.407979 GCTGATATTGGCCCTTGGATTTAAAA 60.408 38.462 0.00 0.00 0.00 1.52
2284 2499 7.123355 TGATATTGGCCCTTGGATTTAAAAG 57.877 36.000 0.00 0.00 0.00 2.27
2285 2500 6.900186 TGATATTGGCCCTTGGATTTAAAAGA 59.100 34.615 0.00 0.00 0.00 2.52
2286 2501 7.568366 TGATATTGGCCCTTGGATTTAAAAGAT 59.432 33.333 0.00 0.00 0.00 2.40
2287 2502 5.675684 TTGGCCCTTGGATTTAAAAGATC 57.324 39.130 0.00 0.00 0.00 2.75
2288 2503 4.682563 TGGCCCTTGGATTTAAAAGATCA 58.317 39.130 0.00 0.00 0.00 2.92
2289 2504 5.090139 TGGCCCTTGGATTTAAAAGATCAA 58.910 37.500 0.00 0.00 0.00 2.57
2290 2505 5.046663 TGGCCCTTGGATTTAAAAGATCAAC 60.047 40.000 0.00 0.00 0.00 3.18
2291 2506 5.102313 GCCCTTGGATTTAAAAGATCAACG 58.898 41.667 0.00 0.00 0.00 4.10
2292 2507 5.650543 CCCTTGGATTTAAAAGATCAACGG 58.349 41.667 0.00 0.00 0.00 4.44
2293 2508 5.185056 CCCTTGGATTTAAAAGATCAACGGT 59.815 40.000 0.00 0.00 0.00 4.83
2294 2509 6.295067 CCCTTGGATTTAAAAGATCAACGGTT 60.295 38.462 0.00 0.00 0.00 4.44
2295 2510 7.094118 CCCTTGGATTTAAAAGATCAACGGTTA 60.094 37.037 0.00 0.00 0.00 2.85
2296 2511 8.466798 CCTTGGATTTAAAAGATCAACGGTTAT 58.533 33.333 0.00 0.00 0.00 1.89
2297 2512 9.289303 CTTGGATTTAAAAGATCAACGGTTATG 57.711 33.333 0.00 0.00 0.00 1.90
2298 2513 8.568676 TGGATTTAAAAGATCAACGGTTATGA 57.431 30.769 0.00 0.00 0.00 2.15
2299 2514 9.184523 TGGATTTAAAAGATCAACGGTTATGAT 57.815 29.630 0.00 0.00 40.14 2.45
2305 2520 7.630242 AAAGATCAACGGTTATGATTGATGT 57.370 32.000 3.55 0.00 41.89 3.06
2306 2521 7.630242 AAGATCAACGGTTATGATTGATGTT 57.370 32.000 3.55 3.53 41.89 2.71
2307 2522 7.251704 AGATCAACGGTTATGATTGATGTTC 57.748 36.000 3.55 0.00 41.89 3.18
2308 2523 7.050377 AGATCAACGGTTATGATTGATGTTCT 58.950 34.615 3.55 0.00 41.89 3.01
2309 2524 7.554118 AGATCAACGGTTATGATTGATGTTCTT 59.446 33.333 3.55 0.00 41.89 2.52
2310 2525 8.731275 ATCAACGGTTATGATTGATGTTCTTA 57.269 30.769 0.00 0.00 40.65 2.10
2311 2526 8.196802 TCAACGGTTATGATTGATGTTCTTAG 57.803 34.615 0.00 0.00 0.00 2.18
2312 2527 7.822334 TCAACGGTTATGATTGATGTTCTTAGT 59.178 33.333 0.00 0.00 0.00 2.24
2313 2528 7.772332 ACGGTTATGATTGATGTTCTTAGTC 57.228 36.000 0.00 0.00 0.00 2.59
2314 2529 6.761714 ACGGTTATGATTGATGTTCTTAGTCC 59.238 38.462 0.00 0.00 0.00 3.85
2315 2530 6.986817 CGGTTATGATTGATGTTCTTAGTCCT 59.013 38.462 0.00 0.00 0.00 3.85
2316 2531 8.141909 CGGTTATGATTGATGTTCTTAGTCCTA 58.858 37.037 0.00 0.00 0.00 2.94
2317 2532 9.262358 GGTTATGATTGATGTTCTTAGTCCTAC 57.738 37.037 0.00 0.00 0.00 3.18
2320 2535 7.718334 TGATTGATGTTCTTAGTCCTACTCA 57.282 36.000 0.00 0.00 0.00 3.41
2321 2536 8.134202 TGATTGATGTTCTTAGTCCTACTCAA 57.866 34.615 0.00 0.00 0.00 3.02
2322 2537 8.253810 TGATTGATGTTCTTAGTCCTACTCAAG 58.746 37.037 0.00 0.00 0.00 3.02
2323 2538 7.776618 TTGATGTTCTTAGTCCTACTCAAGA 57.223 36.000 0.00 0.00 0.00 3.02
2324 2539 7.159322 TGATGTTCTTAGTCCTACTCAAGAC 57.841 40.000 0.00 0.00 0.00 3.01
2325 2540 6.948886 TGATGTTCTTAGTCCTACTCAAGACT 59.051 38.462 0.00 0.00 45.20 3.24
2326 2541 6.821031 TGTTCTTAGTCCTACTCAAGACTC 57.179 41.667 0.00 0.00 42.31 3.36
2327 2542 5.411977 TGTTCTTAGTCCTACTCAAGACTCG 59.588 44.000 0.00 0.00 42.31 4.18
2328 2543 5.163281 TCTTAGTCCTACTCAAGACTCGT 57.837 43.478 0.00 0.00 42.31 4.18
2329 2544 6.291648 TCTTAGTCCTACTCAAGACTCGTA 57.708 41.667 0.00 0.00 42.31 3.43
2330 2545 6.105333 TCTTAGTCCTACTCAAGACTCGTAC 58.895 44.000 0.00 0.00 42.31 3.67
2331 2546 4.283363 AGTCCTACTCAAGACTCGTACA 57.717 45.455 0.00 0.00 39.08 2.90
2332 2547 4.002316 AGTCCTACTCAAGACTCGTACAC 58.998 47.826 0.00 0.00 39.08 2.90
2333 2548 4.002316 GTCCTACTCAAGACTCGTACACT 58.998 47.826 0.00 0.00 0.00 3.55
2334 2549 5.046735 AGTCCTACTCAAGACTCGTACACTA 60.047 44.000 0.00 0.00 39.08 2.74
2335 2550 5.816777 GTCCTACTCAAGACTCGTACACTAT 59.183 44.000 0.00 0.00 0.00 2.12
2336 2551 6.983307 GTCCTACTCAAGACTCGTACACTATA 59.017 42.308 0.00 0.00 0.00 1.31
2337 2552 7.656948 GTCCTACTCAAGACTCGTACACTATAT 59.343 40.741 0.00 0.00 0.00 0.86
2338 2553 8.864087 TCCTACTCAAGACTCGTACACTATATA 58.136 37.037 0.00 0.00 0.00 0.86
2339 2554 9.142515 CCTACTCAAGACTCGTACACTATATAG 57.857 40.741 8.27 8.27 0.00 1.31
2340 2555 9.695526 CTACTCAAGACTCGTACACTATATAGT 57.304 37.037 9.71 9.71 36.90 2.12
2342 2557 9.695526 ACTCAAGACTCGTACACTATATAGTAG 57.304 37.037 15.03 10.87 34.13 2.57
2343 2558 9.911138 CTCAAGACTCGTACACTATATAGTAGA 57.089 37.037 15.03 10.95 34.13 2.59
2344 2559 9.911138 TCAAGACTCGTACACTATATAGTAGAG 57.089 37.037 15.03 19.59 34.13 2.43
2345 2560 9.695526 CAAGACTCGTACACTATATAGTAGAGT 57.304 37.037 25.72 25.72 37.99 3.24
2403 2618 9.260002 TGTATTTCTTTCTTCCATTTTCTTTGC 57.740 29.630 0.00 0.00 0.00 3.68
2404 2619 9.481340 GTATTTCTTTCTTCCATTTTCTTTGCT 57.519 29.630 0.00 0.00 0.00 3.91
2405 2620 8.969260 ATTTCTTTCTTCCATTTTCTTTGCTT 57.031 26.923 0.00 0.00 0.00 3.91
2406 2621 8.791327 TTTCTTTCTTCCATTTTCTTTGCTTT 57.209 26.923 0.00 0.00 0.00 3.51
2407 2622 7.775397 TCTTTCTTCCATTTTCTTTGCTTTG 57.225 32.000 0.00 0.00 0.00 2.77
2408 2623 7.330262 TCTTTCTTCCATTTTCTTTGCTTTGT 58.670 30.769 0.00 0.00 0.00 2.83
2409 2624 7.823799 TCTTTCTTCCATTTTCTTTGCTTTGTT 59.176 29.630 0.00 0.00 0.00 2.83
2410 2625 7.920160 TTCTTCCATTTTCTTTGCTTTGTTT 57.080 28.000 0.00 0.00 0.00 2.83
2411 2626 7.920160 TCTTCCATTTTCTTTGCTTTGTTTT 57.080 28.000 0.00 0.00 0.00 2.43
2412 2627 8.334263 TCTTCCATTTTCTTTGCTTTGTTTTT 57.666 26.923 0.00 0.00 0.00 1.94
2448 2663 9.996554 TTCTTCTTTTCTTTTCTTTGTTTTCCT 57.003 25.926 0.00 0.00 0.00 3.36
2449 2664 9.639601 TCTTCTTTTCTTTTCTTTGTTTTCCTC 57.360 29.630 0.00 0.00 0.00 3.71
2450 2665 9.645059 CTTCTTTTCTTTTCTTTGTTTTCCTCT 57.355 29.630 0.00 0.00 0.00 3.69
2451 2666 9.996554 TTCTTTTCTTTTCTTTGTTTTCCTCTT 57.003 25.926 0.00 0.00 0.00 2.85
2452 2667 9.639601 TCTTTTCTTTTCTTTGTTTTCCTCTTC 57.360 29.630 0.00 0.00 0.00 2.87
2453 2668 9.645059 CTTTTCTTTTCTTTGTTTTCCTCTTCT 57.355 29.630 0.00 0.00 0.00 2.85
2454 2669 9.996554 TTTTCTTTTCTTTGTTTTCCTCTTCTT 57.003 25.926 0.00 0.00 0.00 2.52
2455 2670 9.996554 TTTCTTTTCTTTGTTTTCCTCTTCTTT 57.003 25.926 0.00 0.00 0.00 2.52
2456 2671 9.996554 TTCTTTTCTTTGTTTTCCTCTTCTTTT 57.003 25.926 0.00 0.00 0.00 2.27
2457 2672 9.423061 TCTTTTCTTTGTTTTCCTCTTCTTTTG 57.577 29.630 0.00 0.00 0.00 2.44
2458 2673 9.208022 CTTTTCTTTGTTTTCCTCTTCTTTTGT 57.792 29.630 0.00 0.00 0.00 2.83
2459 2674 9.554395 TTTTCTTTGTTTTCCTCTTCTTTTGTT 57.446 25.926 0.00 0.00 0.00 2.83
2460 2675 9.554395 TTTCTTTGTTTTCCTCTTCTTTTGTTT 57.446 25.926 0.00 0.00 0.00 2.83
2461 2676 8.532977 TCTTTGTTTTCCTCTTCTTTTGTTTG 57.467 30.769 0.00 0.00 0.00 2.93
2462 2677 8.147704 TCTTTGTTTTCCTCTTCTTTTGTTTGT 58.852 29.630 0.00 0.00 0.00 2.83
2463 2678 8.669946 TTTGTTTTCCTCTTCTTTTGTTTGTT 57.330 26.923 0.00 0.00 0.00 2.83
2464 2679 8.669946 TTGTTTTCCTCTTCTTTTGTTTGTTT 57.330 26.923 0.00 0.00 0.00 2.83
2465 2680 8.669946 TGTTTTCCTCTTCTTTTGTTTGTTTT 57.330 26.923 0.00 0.00 0.00 2.43
2466 2681 8.769891 TGTTTTCCTCTTCTTTTGTTTGTTTTC 58.230 29.630 0.00 0.00 0.00 2.29
2467 2682 7.899178 TTTCCTCTTCTTTTGTTTGTTTTCC 57.101 32.000 0.00 0.00 0.00 3.13
2468 2683 6.850752 TCCTCTTCTTTTGTTTGTTTTCCT 57.149 33.333 0.00 0.00 0.00 3.36
2469 2684 7.239763 TCCTCTTCTTTTGTTTGTTTTCCTT 57.760 32.000 0.00 0.00 0.00 3.36
2470 2685 7.676004 TCCTCTTCTTTTGTTTGTTTTCCTTT 58.324 30.769 0.00 0.00 0.00 3.11
2471 2686 7.817478 TCCTCTTCTTTTGTTTGTTTTCCTTTC 59.183 33.333 0.00 0.00 0.00 2.62
2472 2687 7.819415 CCTCTTCTTTTGTTTGTTTTCCTTTCT 59.181 33.333 0.00 0.00 0.00 2.52
2473 2688 9.208022 CTCTTCTTTTGTTTGTTTTCCTTTCTT 57.792 29.630 0.00 0.00 0.00 2.52
2474 2689 9.554395 TCTTCTTTTGTTTGTTTTCCTTTCTTT 57.446 25.926 0.00 0.00 0.00 2.52
2506 2721 8.986929 TCTCTTTTCTTTTCCTCATTTCTTCT 57.013 30.769 0.00 0.00 0.00 2.85
2507 2722 9.413734 TCTCTTTTCTTTTCCTCATTTCTTCTT 57.586 29.630 0.00 0.00 0.00 2.52
2508 2723 9.676195 CTCTTTTCTTTTCCTCATTTCTTCTTC 57.324 33.333 0.00 0.00 0.00 2.87
2509 2724 9.413734 TCTTTTCTTTTCCTCATTTCTTCTTCT 57.586 29.630 0.00 0.00 0.00 2.85
2513 2728 9.807649 TTCTTTTCCTCATTTCTTCTTCTTTTG 57.192 29.630 0.00 0.00 0.00 2.44
2514 2729 8.971073 TCTTTTCCTCATTTCTTCTTCTTTTGT 58.029 29.630 0.00 0.00 0.00 2.83
2515 2730 9.591792 CTTTTCCTCATTTCTTCTTCTTTTGTT 57.408 29.630 0.00 0.00 0.00 2.83
2516 2731 9.586435 TTTTCCTCATTTCTTCTTCTTTTGTTC 57.414 29.630 0.00 0.00 0.00 3.18
2517 2732 8.525290 TTCCTCATTTCTTCTTCTTTTGTTCT 57.475 30.769 0.00 0.00 0.00 3.01
2518 2733 8.525290 TCCTCATTTCTTCTTCTTTTGTTCTT 57.475 30.769 0.00 0.00 0.00 2.52
2519 2734 8.408601 TCCTCATTTCTTCTTCTTTTGTTCTTG 58.591 33.333 0.00 0.00 0.00 3.02
2520 2735 8.193438 CCTCATTTCTTCTTCTTTTGTTCTTGT 58.807 33.333 0.00 0.00 0.00 3.16
2521 2736 9.578439 CTCATTTCTTCTTCTTTTGTTCTTGTT 57.422 29.630 0.00 0.00 0.00 2.83
2522 2737 9.357652 TCATTTCTTCTTCTTTTGTTCTTGTTG 57.642 29.630 0.00 0.00 0.00 3.33
2523 2738 9.143631 CATTTCTTCTTCTTTTGTTCTTGTTGT 57.856 29.630 0.00 0.00 0.00 3.32
2524 2739 9.710900 ATTTCTTCTTCTTTTGTTCTTGTTGTT 57.289 25.926 0.00 0.00 0.00 2.83
2525 2740 9.541143 TTTCTTCTTCTTTTGTTCTTGTTGTTT 57.459 25.926 0.00 0.00 0.00 2.83
2526 2741 9.541143 TTCTTCTTCTTTTGTTCTTGTTGTTTT 57.459 25.926 0.00 0.00 0.00 2.43
2527 2742 8.977505 TCTTCTTCTTTTGTTCTTGTTGTTTTG 58.022 29.630 0.00 0.00 0.00 2.44
2528 2743 8.655651 TTCTTCTTTTGTTCTTGTTGTTTTGT 57.344 26.923 0.00 0.00 0.00 2.83
2529 2744 8.655651 TCTTCTTTTGTTCTTGTTGTTTTGTT 57.344 26.923 0.00 0.00 0.00 2.83
2530 2745 8.547069 TCTTCTTTTGTTCTTGTTGTTTTGTTG 58.453 29.630 0.00 0.00 0.00 3.33
2531 2746 7.778470 TCTTTTGTTCTTGTTGTTTTGTTGT 57.222 28.000 0.00 0.00 0.00 3.32
2532 2747 7.846485 TCTTTTGTTCTTGTTGTTTTGTTGTC 58.154 30.769 0.00 0.00 0.00 3.18
2533 2748 7.708752 TCTTTTGTTCTTGTTGTTTTGTTGTCT 59.291 29.630 0.00 0.00 0.00 3.41
2534 2749 7.778470 TTTGTTCTTGTTGTTTTGTTGTCTT 57.222 28.000 0.00 0.00 0.00 3.01
2535 2750 8.873215 TTTGTTCTTGTTGTTTTGTTGTCTTA 57.127 26.923 0.00 0.00 0.00 2.10
2536 2751 9.482627 TTTGTTCTTGTTGTTTTGTTGTCTTAT 57.517 25.926 0.00 0.00 0.00 1.73
2537 2752 8.682128 TGTTCTTGTTGTTTTGTTGTCTTATC 57.318 30.769 0.00 0.00 0.00 1.75
2538 2753 8.519526 TGTTCTTGTTGTTTTGTTGTCTTATCT 58.480 29.630 0.00 0.00 0.00 1.98
2539 2754 9.353999 GTTCTTGTTGTTTTGTTGTCTTATCTT 57.646 29.630 0.00 0.00 0.00 2.40
2540 2755 9.921637 TTCTTGTTGTTTTGTTGTCTTATCTTT 57.078 25.926 0.00 0.00 0.00 2.52
2541 2756 9.921637 TCTTGTTGTTTTGTTGTCTTATCTTTT 57.078 25.926 0.00 0.00 0.00 2.27
2542 2757 9.956797 CTTGTTGTTTTGTTGTCTTATCTTTTG 57.043 29.630 0.00 0.00 0.00 2.44
2543 2758 9.698309 TTGTTGTTTTGTTGTCTTATCTTTTGA 57.302 25.926 0.00 0.00 0.00 2.69
2544 2759 9.698309 TGTTGTTTTGTTGTCTTATCTTTTGAA 57.302 25.926 0.00 0.00 0.00 2.69
2545 2760 9.952341 GTTGTTTTGTTGTCTTATCTTTTGAAC 57.048 29.630 0.00 0.00 0.00 3.18
2546 2761 9.698309 TTGTTTTGTTGTCTTATCTTTTGAACA 57.302 25.926 0.00 0.00 0.00 3.18
2547 2762 9.868277 TGTTTTGTTGTCTTATCTTTTGAACAT 57.132 25.926 0.00 0.00 0.00 2.71
2549 2764 9.868277 TTTTGTTGTCTTATCTTTTGAACATGT 57.132 25.926 0.00 0.00 0.00 3.21
2553 2768 9.612620 GTTGTCTTATCTTTTGAACATGTAAGG 57.387 33.333 0.00 0.00 0.00 2.69
2554 2769 9.567776 TTGTCTTATCTTTTGAACATGTAAGGA 57.432 29.630 0.00 0.00 0.00 3.36
2555 2770 9.567776 TGTCTTATCTTTTGAACATGTAAGGAA 57.432 29.630 0.00 0.00 0.00 3.36
2560 2775 7.873719 TCTTTTGAACATGTAAGGAAAGACA 57.126 32.000 16.29 3.56 29.60 3.41
2561 2776 8.287439 TCTTTTGAACATGTAAGGAAAGACAA 57.713 30.769 16.29 0.00 29.60 3.18
2562 2777 8.405531 TCTTTTGAACATGTAAGGAAAGACAAG 58.594 33.333 16.29 2.55 29.60 3.16
2563 2778 6.633500 TTGAACATGTAAGGAAAGACAAGG 57.367 37.500 0.00 0.00 0.00 3.61
2564 2779 5.935945 TGAACATGTAAGGAAAGACAAGGA 58.064 37.500 0.00 0.00 0.00 3.36
2565 2780 5.997746 TGAACATGTAAGGAAAGACAAGGAG 59.002 40.000 0.00 0.00 0.00 3.69
2566 2781 4.327680 ACATGTAAGGAAAGACAAGGAGC 58.672 43.478 0.00 0.00 0.00 4.70
2567 2782 4.202461 ACATGTAAGGAAAGACAAGGAGCA 60.202 41.667 0.00 0.00 0.00 4.26
2568 2783 4.431416 TGTAAGGAAAGACAAGGAGCAA 57.569 40.909 0.00 0.00 0.00 3.91
2569 2784 4.985538 TGTAAGGAAAGACAAGGAGCAAT 58.014 39.130 0.00 0.00 0.00 3.56
2570 2785 4.761739 TGTAAGGAAAGACAAGGAGCAATG 59.238 41.667 0.00 0.00 0.00 2.82
2571 2786 2.800250 AGGAAAGACAAGGAGCAATGG 58.200 47.619 0.00 0.00 0.00 3.16
2572 2787 1.821136 GGAAAGACAAGGAGCAATGGG 59.179 52.381 0.00 0.00 0.00 4.00
2573 2788 1.821136 GAAAGACAAGGAGCAATGGGG 59.179 52.381 0.00 0.00 0.00 4.96
2574 2789 0.779997 AAGACAAGGAGCAATGGGGT 59.220 50.000 0.00 0.00 0.00 4.95
2575 2790 0.038744 AGACAAGGAGCAATGGGGTG 59.961 55.000 0.00 0.00 0.00 4.61
2576 2791 0.967380 GACAAGGAGCAATGGGGTGG 60.967 60.000 0.00 0.00 0.00 4.61
2577 2792 1.077265 CAAGGAGCAATGGGGTGGT 59.923 57.895 0.00 0.00 0.00 4.16
2578 2793 1.077265 AAGGAGCAATGGGGTGGTG 59.923 57.895 0.00 0.00 0.00 4.17
2579 2794 1.434513 AAGGAGCAATGGGGTGGTGA 61.435 55.000 0.00 0.00 0.00 4.02
2580 2795 1.379044 GGAGCAATGGGGTGGTGAG 60.379 63.158 0.00 0.00 0.00 3.51
2581 2796 1.379044 GAGCAATGGGGTGGTGAGG 60.379 63.158 0.00 0.00 0.00 3.86
2582 2797 2.362889 GCAATGGGGTGGTGAGGG 60.363 66.667 0.00 0.00 0.00 4.30
2583 2798 2.360191 CAATGGGGTGGTGAGGGG 59.640 66.667 0.00 0.00 0.00 4.79
2584 2799 2.212761 AATGGGGTGGTGAGGGGA 59.787 61.111 0.00 0.00 0.00 4.81
2585 2800 1.930656 AATGGGGTGGTGAGGGGAG 60.931 63.158 0.00 0.00 0.00 4.30
2586 2801 3.970363 ATGGGGTGGTGAGGGGAGG 62.970 68.421 0.00 0.00 0.00 4.30
2589 2804 3.403558 GGTGGTGAGGGGAGGCTC 61.404 72.222 5.78 5.78 0.00 4.70
2590 2805 2.607750 GTGGTGAGGGGAGGCTCA 60.608 66.667 17.69 0.00 0.00 4.26
2591 2806 2.206900 TGGTGAGGGGAGGCTCAA 59.793 61.111 17.69 0.00 0.00 3.02
2592 2807 2.224159 TGGTGAGGGGAGGCTCAAC 61.224 63.158 17.69 8.38 37.77 3.18
2593 2808 2.671682 GTGAGGGGAGGCTCAACC 59.328 66.667 17.69 17.29 39.61 3.77
2594 2809 2.206900 TGAGGGGAGGCTCAACCA 59.793 61.111 23.87 10.96 43.14 3.67
2595 2810 2.224159 TGAGGGGAGGCTCAACCAC 61.224 63.158 23.87 19.31 43.14 4.16
2596 2811 1.920835 GAGGGGAGGCTCAACCACT 60.921 63.158 23.87 12.14 43.19 4.00
2597 2812 0.617820 GAGGGGAGGCTCAACCACTA 60.618 60.000 23.87 0.00 40.30 2.74
2598 2813 0.178873 AGGGGAGGCTCAACCACTAA 60.179 55.000 23.87 0.00 43.14 2.24
2599 2814 0.035343 GGGGAGGCTCAACCACTAAC 60.035 60.000 17.69 0.00 43.14 2.34
2600 2815 0.984995 GGGAGGCTCAACCACTAACT 59.015 55.000 17.69 0.00 43.14 2.24
2601 2816 1.351350 GGGAGGCTCAACCACTAACTT 59.649 52.381 17.69 0.00 43.14 2.66
2602 2817 2.427506 GGAGGCTCAACCACTAACTTG 58.572 52.381 17.69 0.00 43.14 3.16
2603 2818 2.427506 GAGGCTCAACCACTAACTTGG 58.572 52.381 10.25 0.00 43.14 3.61
2604 2819 2.038557 GAGGCTCAACCACTAACTTGGA 59.961 50.000 10.25 0.00 43.14 3.53
2605 2820 2.039084 AGGCTCAACCACTAACTTGGAG 59.961 50.000 0.00 0.00 43.14 3.86
2606 2821 1.807142 GCTCAACCACTAACTTGGAGC 59.193 52.381 0.00 0.00 39.24 4.70
2607 2822 2.551071 GCTCAACCACTAACTTGGAGCT 60.551 50.000 0.00 0.00 39.24 4.09
2608 2823 3.744660 CTCAACCACTAACTTGGAGCTT 58.255 45.455 0.00 0.00 39.24 3.74
2609 2824 4.802918 GCTCAACCACTAACTTGGAGCTTA 60.803 45.833 0.00 0.00 39.24 3.09
2610 2825 4.894784 TCAACCACTAACTTGGAGCTTAG 58.105 43.478 0.00 0.00 39.24 2.18
2611 2826 4.347000 TCAACCACTAACTTGGAGCTTAGT 59.653 41.667 0.00 0.00 39.24 2.24
2612 2827 4.273148 ACCACTAACTTGGAGCTTAGTG 57.727 45.455 12.22 12.22 45.05 2.74
2614 2829 4.273148 CACTAACTTGGAGCTTAGTGGT 57.727 45.455 11.57 5.75 43.12 4.16
2615 2830 4.246458 CACTAACTTGGAGCTTAGTGGTC 58.754 47.826 11.57 0.00 43.12 4.02
2616 2831 3.901844 ACTAACTTGGAGCTTAGTGGTCA 59.098 43.478 0.00 0.00 44.40 4.02
2617 2832 2.841442 ACTTGGAGCTTAGTGGTCAC 57.159 50.000 0.00 0.00 44.40 3.67
2618 2833 2.330216 ACTTGGAGCTTAGTGGTCACT 58.670 47.619 8.74 8.74 44.40 3.41
2619 2834 2.706190 ACTTGGAGCTTAGTGGTCACTT 59.294 45.455 9.02 0.00 44.40 3.16
2620 2835 3.901844 ACTTGGAGCTTAGTGGTCACTTA 59.098 43.478 9.02 0.00 44.40 2.24
2621 2836 4.347000 ACTTGGAGCTTAGTGGTCACTTAA 59.653 41.667 9.02 1.93 44.40 1.85
2622 2837 5.013183 ACTTGGAGCTTAGTGGTCACTTAAT 59.987 40.000 9.02 0.00 44.40 1.40
2623 2838 5.499004 TGGAGCTTAGTGGTCACTTAATT 57.501 39.130 9.02 0.00 44.40 1.40
2624 2839 5.876357 TGGAGCTTAGTGGTCACTTAATTT 58.124 37.500 9.02 0.00 44.40 1.82
2625 2840 6.303839 TGGAGCTTAGTGGTCACTTAATTTT 58.696 36.000 9.02 0.00 44.40 1.82
2626 2841 6.775629 TGGAGCTTAGTGGTCACTTAATTTTT 59.224 34.615 9.02 0.00 44.40 1.94
2627 2842 7.940137 TGGAGCTTAGTGGTCACTTAATTTTTA 59.060 33.333 9.02 0.00 44.40 1.52
2628 2843 8.789762 GGAGCTTAGTGGTCACTTAATTTTTAA 58.210 33.333 9.02 0.00 44.40 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 12 2.049433 CGCCGTCGGTGAGAGTTT 60.049 61.111 20.30 0.00 34.74 2.66
238 269 3.179443 TCCGATCTTGCATGAACTACC 57.821 47.619 6.36 0.00 0.00 3.18
284 405 0.704461 CCAATCCCCCAATCCCCCTA 60.704 60.000 0.00 0.00 0.00 3.53
297 434 3.163616 TCTGTTTTGTACCCCCAATCC 57.836 47.619 0.00 0.00 0.00 3.01
298 435 6.183360 CCAATATCTGTTTTGTACCCCCAATC 60.183 42.308 0.00 0.00 0.00 2.67
299 436 5.660864 CCAATATCTGTTTTGTACCCCCAAT 59.339 40.000 0.00 0.00 0.00 3.16
300 437 5.020132 CCAATATCTGTTTTGTACCCCCAA 58.980 41.667 0.00 0.00 0.00 4.12
301 438 4.605183 CCAATATCTGTTTTGTACCCCCA 58.395 43.478 0.00 0.00 0.00 4.96
302 439 3.383505 GCCAATATCTGTTTTGTACCCCC 59.616 47.826 0.00 0.00 0.00 5.40
303 440 4.278310 AGCCAATATCTGTTTTGTACCCC 58.722 43.478 0.00 0.00 0.00 4.95
304 441 6.183360 GGTTAGCCAATATCTGTTTTGTACCC 60.183 42.308 0.00 0.00 34.09 3.69
311 456 2.612212 CGCGGTTAGCCAATATCTGTTT 59.388 45.455 0.00 0.00 44.76 2.83
378 550 1.730446 GCAAGGCGATGAACAAGAAGC 60.730 52.381 0.00 0.00 0.00 3.86
418 590 1.176619 TTGACTGAGCCGAGGACGAA 61.177 55.000 0.00 0.00 42.66 3.85
431 603 0.247460 TGGCAGATCGACCTTGACTG 59.753 55.000 8.31 0.00 0.00 3.51
436 608 1.115467 CTACCTGGCAGATCGACCTT 58.885 55.000 17.94 0.00 0.00 3.50
483 655 0.389817 CGAAGAACCGGTGCAGATGA 60.390 55.000 16.99 0.00 0.00 2.92
590 765 3.693085 CGGTCCAAGTACAAGAGCTACTA 59.307 47.826 0.00 0.00 0.00 1.82
612 787 2.668945 GACGCTAAACAGAGGAAGAAGC 59.331 50.000 0.00 0.00 0.00 3.86
645 820 1.452651 CGCTGGGCCATGAATCAGT 60.453 57.895 6.72 0.00 0.00 3.41
698 874 2.158986 AGCTGAAGACGATGATTCCTGG 60.159 50.000 0.00 0.00 0.00 4.45
831 1008 1.071699 CCTTCTTTCTCGGGTGGTCAA 59.928 52.381 0.00 0.00 0.00 3.18
832 1009 0.685097 CCTTCTTTCTCGGGTGGTCA 59.315 55.000 0.00 0.00 0.00 4.02
871 1048 3.503839 AACGCCAACCCCTTCCCA 61.504 61.111 0.00 0.00 0.00 4.37
945 1128 1.006519 CCCATCACCATTTACCCACCA 59.993 52.381 0.00 0.00 0.00 4.17
957 1141 1.271840 TACTCACCCTGCCCATCACC 61.272 60.000 0.00 0.00 0.00 4.02
961 1145 4.289672 CCTATATTTACTCACCCTGCCCAT 59.710 45.833 0.00 0.00 0.00 4.00
1011 1200 4.097437 AGCATGTAGTTCAAATGGCATGAG 59.903 41.667 0.00 0.00 36.71 2.90
1023 1212 5.586243 TGGCTTATTGAAGAGCATGTAGTTC 59.414 40.000 5.83 0.00 40.63 3.01
1058 1247 2.885135 TTCATGGAGTCAGGCACAAT 57.115 45.000 0.00 0.00 0.00 2.71
1154 1343 0.035915 TCGTCGGGCATTGGATGAAA 60.036 50.000 0.00 0.00 0.00 2.69
1199 1391 1.004918 CAGGCGTCTTCGGGTCTTT 60.005 57.895 0.00 0.00 37.56 2.52
1273 1470 2.642171 TCCTCCTCATGGTAGTGGTT 57.358 50.000 0.00 0.00 34.23 3.67
1315 1512 2.226962 AGCTTTGGTGCAAGGATGAT 57.773 45.000 0.00 0.00 34.99 2.45
1680 1881 8.200792 ACAGTTCAAAGCATAAACCATAAACAA 58.799 29.630 0.00 0.00 0.00 2.83
1790 2004 1.876799 CACTTCGGCACAACCATGTAA 59.123 47.619 0.00 0.00 37.82 2.41
1940 2154 2.874648 TACATGCCCTCTTGCCTGCG 62.875 60.000 0.00 0.00 31.00 5.18
2084 2299 2.294233 TGGAGAAAGTGAAGCAACATGC 59.706 45.455 0.00 0.00 45.46 4.06
2085 2300 3.316029 TGTGGAGAAAGTGAAGCAACATG 59.684 43.478 0.00 0.00 0.00 3.21
2086 2301 3.554934 TGTGGAGAAAGTGAAGCAACAT 58.445 40.909 0.00 0.00 0.00 2.71
2087 2302 2.997980 TGTGGAGAAAGTGAAGCAACA 58.002 42.857 0.00 0.00 0.00 3.33
2088 2303 3.057946 GGATGTGGAGAAAGTGAAGCAAC 60.058 47.826 0.00 0.00 0.00 4.17
2089 2304 3.149196 GGATGTGGAGAAAGTGAAGCAA 58.851 45.455 0.00 0.00 0.00 3.91
2090 2305 2.373169 AGGATGTGGAGAAAGTGAAGCA 59.627 45.455 0.00 0.00 0.00 3.91
2091 2306 3.006247 GAGGATGTGGAGAAAGTGAAGC 58.994 50.000 0.00 0.00 0.00 3.86
2092 2307 3.604582 GGAGGATGTGGAGAAAGTGAAG 58.395 50.000 0.00 0.00 0.00 3.02
2093 2308 2.305927 GGGAGGATGTGGAGAAAGTGAA 59.694 50.000 0.00 0.00 0.00 3.18
2094 2309 1.909302 GGGAGGATGTGGAGAAAGTGA 59.091 52.381 0.00 0.00 0.00 3.41
2095 2310 1.912043 AGGGAGGATGTGGAGAAAGTG 59.088 52.381 0.00 0.00 0.00 3.16
2096 2311 2.350863 AGGGAGGATGTGGAGAAAGT 57.649 50.000 0.00 0.00 0.00 2.66
2097 2312 3.728385 AAAGGGAGGATGTGGAGAAAG 57.272 47.619 0.00 0.00 0.00 2.62
2098 2313 4.469469 AAAAAGGGAGGATGTGGAGAAA 57.531 40.909 0.00 0.00 0.00 2.52
2132 2347 2.047002 TGCCACATGACCATCAGATG 57.953 50.000 0.00 3.04 0.00 2.90
2133 2348 2.291089 TGTTGCCACATGACCATCAGAT 60.291 45.455 0.00 0.00 0.00 2.90
2134 2349 1.073603 TGTTGCCACATGACCATCAGA 59.926 47.619 0.00 0.00 0.00 3.27
2135 2350 1.200716 GTGTTGCCACATGACCATCAG 59.799 52.381 0.00 0.00 41.44 2.90
2136 2351 1.246649 GTGTTGCCACATGACCATCA 58.753 50.000 0.00 0.00 41.44 3.07
2137 2352 0.168788 CGTGTTGCCACATGACCATC 59.831 55.000 4.10 0.00 41.91 3.51
2138 2353 0.250684 TCGTGTTGCCACATGACCAT 60.251 50.000 8.69 0.00 42.94 3.55
2139 2354 1.147153 TCGTGTTGCCACATGACCA 59.853 52.632 8.69 0.00 42.94 4.02
2140 2355 4.057224 TCGTGTTGCCACATGACC 57.943 55.556 8.69 0.00 42.94 4.02
2142 2357 1.599518 GGGTCGTGTTGCCACATGA 60.600 57.895 8.69 8.69 45.16 3.07
2143 2358 1.243342 ATGGGTCGTGTTGCCACATG 61.243 55.000 3.75 3.75 41.93 3.21
2144 2359 0.539438 AATGGGTCGTGTTGCCACAT 60.539 50.000 0.00 0.00 41.93 3.21
2145 2360 1.152860 AATGGGTCGTGTTGCCACA 60.153 52.632 0.00 0.00 41.93 4.17
2146 2361 1.285641 CAATGGGTCGTGTTGCCAC 59.714 57.895 0.00 0.00 38.27 5.01
2147 2362 1.900981 CCAATGGGTCGTGTTGCCA 60.901 57.895 0.00 0.00 0.00 4.92
2148 2363 2.635443 CCCAATGGGTCGTGTTGCC 61.635 63.158 10.91 0.00 38.25 4.52
2149 2364 2.961768 CCCAATGGGTCGTGTTGC 59.038 61.111 10.91 0.00 38.25 4.17
2159 2374 1.058284 CCCATAAATGGCCCCAATGG 58.942 55.000 13.81 13.81 46.70 3.16
2160 2375 0.397564 GCCCATAAATGGCCCCAATG 59.602 55.000 0.00 0.00 46.70 2.82
2161 2376 2.852839 GCCCATAAATGGCCCCAAT 58.147 52.632 0.00 0.00 46.70 3.16
2162 2377 4.390341 GCCCATAAATGGCCCCAA 57.610 55.556 0.00 0.00 46.70 4.12
2184 2399 2.690497 TCATGTGCCGTTTCCAGAAAAA 59.310 40.909 0.00 0.00 31.33 1.94
2185 2400 2.302260 TCATGTGCCGTTTCCAGAAAA 58.698 42.857 0.00 0.00 31.33 2.29
2186 2401 1.974265 TCATGTGCCGTTTCCAGAAA 58.026 45.000 0.00 0.00 0.00 2.52
2187 2402 2.198827 ATCATGTGCCGTTTCCAGAA 57.801 45.000 0.00 0.00 0.00 3.02
2188 2403 2.198827 AATCATGTGCCGTTTCCAGA 57.801 45.000 0.00 0.00 0.00 3.86
2189 2404 4.336433 AGAATAATCATGTGCCGTTTCCAG 59.664 41.667 0.00 0.00 0.00 3.86
2190 2405 4.269183 AGAATAATCATGTGCCGTTTCCA 58.731 39.130 0.00 0.00 0.00 3.53
2191 2406 4.900635 AGAATAATCATGTGCCGTTTCC 57.099 40.909 0.00 0.00 0.00 3.13
2192 2407 6.844696 TCTAGAATAATCATGTGCCGTTTC 57.155 37.500 0.00 0.00 0.00 2.78
2193 2408 6.597672 TGTTCTAGAATAATCATGTGCCGTTT 59.402 34.615 8.75 0.00 0.00 3.60
2194 2409 6.037172 GTGTTCTAGAATAATCATGTGCCGTT 59.963 38.462 8.75 0.00 0.00 4.44
2195 2410 5.523916 GTGTTCTAGAATAATCATGTGCCGT 59.476 40.000 8.75 0.00 0.00 5.68
2196 2411 5.523552 TGTGTTCTAGAATAATCATGTGCCG 59.476 40.000 8.75 0.00 0.00 5.69
2197 2412 6.540189 ACTGTGTTCTAGAATAATCATGTGCC 59.460 38.462 8.75 0.00 0.00 5.01
2198 2413 7.545362 ACTGTGTTCTAGAATAATCATGTGC 57.455 36.000 8.75 0.00 0.00 4.57
2206 2421 9.185680 TGCTACATCTACTGTGTTCTAGAATAA 57.814 33.333 8.75 0.00 38.92 1.40
2207 2422 8.747538 TGCTACATCTACTGTGTTCTAGAATA 57.252 34.615 8.75 2.61 38.92 1.75
2208 2423 7.646548 TGCTACATCTACTGTGTTCTAGAAT 57.353 36.000 8.75 0.00 38.92 2.40
2209 2424 6.404844 GCTGCTACATCTACTGTGTTCTAGAA 60.405 42.308 0.00 0.00 38.92 2.10
2210 2425 5.066634 GCTGCTACATCTACTGTGTTCTAGA 59.933 44.000 0.00 0.00 38.92 2.43
2211 2426 5.163612 TGCTGCTACATCTACTGTGTTCTAG 60.164 44.000 0.00 0.00 38.92 2.43
2212 2427 4.705023 TGCTGCTACATCTACTGTGTTCTA 59.295 41.667 0.00 0.00 38.92 2.10
2213 2428 3.511540 TGCTGCTACATCTACTGTGTTCT 59.488 43.478 0.00 0.00 38.92 3.01
2214 2429 3.849911 TGCTGCTACATCTACTGTGTTC 58.150 45.455 0.00 0.00 38.92 3.18
2215 2430 3.259374 ACTGCTGCTACATCTACTGTGTT 59.741 43.478 0.00 0.00 38.92 3.32
2216 2431 2.828520 ACTGCTGCTACATCTACTGTGT 59.171 45.455 0.00 0.00 38.92 3.72
2217 2432 3.185330 CACTGCTGCTACATCTACTGTG 58.815 50.000 0.00 0.00 38.92 3.66
2218 2433 2.828520 ACACTGCTGCTACATCTACTGT 59.171 45.455 0.00 0.00 42.13 3.55
2219 2434 3.516981 ACACTGCTGCTACATCTACTG 57.483 47.619 0.00 0.00 0.00 2.74
2220 2435 4.097135 CAGTACACTGCTGCTACATCTACT 59.903 45.833 0.00 0.00 37.15 2.57
2221 2436 4.355437 CAGTACACTGCTGCTACATCTAC 58.645 47.826 0.00 0.00 37.15 2.59
2222 2437 4.639135 CAGTACACTGCTGCTACATCTA 57.361 45.455 0.00 0.00 37.15 1.98
2223 2438 3.516981 CAGTACACTGCTGCTACATCT 57.483 47.619 0.00 0.00 37.15 2.90
2235 2450 4.193826 AGATTCGCATGAACAGTACACT 57.806 40.909 0.00 0.00 36.81 3.55
2236 2451 4.641954 CAAGATTCGCATGAACAGTACAC 58.358 43.478 0.00 0.00 36.81 2.90
2237 2452 3.125146 GCAAGATTCGCATGAACAGTACA 59.875 43.478 0.00 0.00 36.81 2.90
2238 2453 3.372206 AGCAAGATTCGCATGAACAGTAC 59.628 43.478 0.00 0.00 36.81 2.73
2239 2454 3.371898 CAGCAAGATTCGCATGAACAGTA 59.628 43.478 0.00 0.00 36.81 2.74
2240 2455 2.161012 CAGCAAGATTCGCATGAACAGT 59.839 45.455 0.00 0.00 36.81 3.55
2241 2456 2.417586 TCAGCAAGATTCGCATGAACAG 59.582 45.455 0.00 0.00 36.81 3.16
2242 2457 2.425539 TCAGCAAGATTCGCATGAACA 58.574 42.857 0.00 0.00 36.81 3.18
2243 2458 3.687572 ATCAGCAAGATTCGCATGAAC 57.312 42.857 0.00 0.00 36.81 3.18
2244 2459 5.278120 CCAATATCAGCAAGATTCGCATGAA 60.278 40.000 0.00 0.00 38.19 2.57
2245 2460 4.214758 CCAATATCAGCAAGATTCGCATGA 59.785 41.667 0.00 0.00 38.19 3.07
2246 2461 4.473199 CCAATATCAGCAAGATTCGCATG 58.527 43.478 0.00 0.00 38.19 4.06
2247 2462 3.057736 GCCAATATCAGCAAGATTCGCAT 60.058 43.478 0.00 0.00 38.19 4.73
2248 2463 2.291465 GCCAATATCAGCAAGATTCGCA 59.709 45.455 0.00 0.00 38.19 5.10
2249 2464 2.351157 GGCCAATATCAGCAAGATTCGC 60.351 50.000 0.00 0.00 38.19 4.70
2250 2465 2.227388 GGGCCAATATCAGCAAGATTCG 59.773 50.000 4.39 0.00 38.19 3.34
2251 2466 3.494332 AGGGCCAATATCAGCAAGATTC 58.506 45.455 6.18 0.00 38.19 2.52
2252 2467 3.607490 AGGGCCAATATCAGCAAGATT 57.393 42.857 6.18 0.00 38.19 2.40
2253 2468 3.228453 CAAGGGCCAATATCAGCAAGAT 58.772 45.455 6.18 0.00 40.86 2.40
2254 2469 2.658285 CAAGGGCCAATATCAGCAAGA 58.342 47.619 6.18 0.00 0.00 3.02
2255 2470 1.684983 CCAAGGGCCAATATCAGCAAG 59.315 52.381 6.18 0.00 0.00 4.01
2256 2471 1.287442 TCCAAGGGCCAATATCAGCAA 59.713 47.619 6.18 0.00 0.00 3.91
2257 2472 0.925558 TCCAAGGGCCAATATCAGCA 59.074 50.000 6.18 0.00 0.00 4.41
2258 2473 2.299326 ATCCAAGGGCCAATATCAGC 57.701 50.000 6.18 0.00 0.00 4.26
2259 2474 6.729690 TTTAAATCCAAGGGCCAATATCAG 57.270 37.500 6.18 0.00 0.00 2.90
2260 2475 6.900186 TCTTTTAAATCCAAGGGCCAATATCA 59.100 34.615 6.18 0.00 0.00 2.15
2261 2476 7.360113 TCTTTTAAATCCAAGGGCCAATATC 57.640 36.000 6.18 0.00 0.00 1.63
2262 2477 7.568366 TGATCTTTTAAATCCAAGGGCCAATAT 59.432 33.333 6.18 0.00 0.00 1.28
2263 2478 6.900186 TGATCTTTTAAATCCAAGGGCCAATA 59.100 34.615 6.18 0.00 0.00 1.90
2264 2479 5.725822 TGATCTTTTAAATCCAAGGGCCAAT 59.274 36.000 6.18 0.00 0.00 3.16
2265 2480 5.090139 TGATCTTTTAAATCCAAGGGCCAA 58.910 37.500 6.18 0.00 0.00 4.52
2266 2481 4.682563 TGATCTTTTAAATCCAAGGGCCA 58.317 39.130 6.18 0.00 0.00 5.36
2267 2482 5.419542 GTTGATCTTTTAAATCCAAGGGCC 58.580 41.667 0.00 0.00 0.00 5.80
2268 2483 5.102313 CGTTGATCTTTTAAATCCAAGGGC 58.898 41.667 0.00 0.00 0.00 5.19
2269 2484 5.185056 ACCGTTGATCTTTTAAATCCAAGGG 59.815 40.000 18.70 18.70 32.13 3.95
2270 2485 6.267496 ACCGTTGATCTTTTAAATCCAAGG 57.733 37.500 0.00 0.00 0.00 3.61
2271 2486 9.289303 CATAACCGTTGATCTTTTAAATCCAAG 57.711 33.333 0.00 0.00 0.00 3.61
2272 2487 9.015367 TCATAACCGTTGATCTTTTAAATCCAA 57.985 29.630 0.00 0.00 0.00 3.53
2273 2488 8.568676 TCATAACCGTTGATCTTTTAAATCCA 57.431 30.769 0.00 0.00 0.00 3.41
2279 2494 9.173021 ACATCAATCATAACCGTTGATCTTTTA 57.827 29.630 0.00 0.00 39.76 1.52
2280 2495 8.055279 ACATCAATCATAACCGTTGATCTTTT 57.945 30.769 0.00 0.00 39.76 2.27
2281 2496 7.630242 ACATCAATCATAACCGTTGATCTTT 57.370 32.000 0.00 0.00 39.76 2.52
2282 2497 7.554118 AGAACATCAATCATAACCGTTGATCTT 59.446 33.333 0.00 0.00 39.76 2.40
2283 2498 7.050377 AGAACATCAATCATAACCGTTGATCT 58.950 34.615 0.00 0.00 39.76 2.75
2284 2499 7.251704 AGAACATCAATCATAACCGTTGATC 57.748 36.000 0.00 0.00 39.76 2.92
2285 2500 7.630242 AAGAACATCAATCATAACCGTTGAT 57.370 32.000 0.00 0.00 41.78 2.57
2286 2501 7.822334 ACTAAGAACATCAATCATAACCGTTGA 59.178 33.333 0.00 0.00 36.42 3.18
2287 2502 7.974675 ACTAAGAACATCAATCATAACCGTTG 58.025 34.615 0.00 0.00 0.00 4.10
2288 2503 7.280205 GGACTAAGAACATCAATCATAACCGTT 59.720 37.037 0.00 0.00 0.00 4.44
2289 2504 6.761714 GGACTAAGAACATCAATCATAACCGT 59.238 38.462 0.00 0.00 0.00 4.83
2290 2505 6.986817 AGGACTAAGAACATCAATCATAACCG 59.013 38.462 0.00 0.00 0.00 4.44
2291 2506 9.262358 GTAGGACTAAGAACATCAATCATAACC 57.738 37.037 0.00 0.00 0.00 2.85
2294 2509 9.421399 TGAGTAGGACTAAGAACATCAATCATA 57.579 33.333 0.00 0.00 0.00 2.15
2295 2510 8.311395 TGAGTAGGACTAAGAACATCAATCAT 57.689 34.615 0.00 0.00 0.00 2.45
2296 2511 7.718334 TGAGTAGGACTAAGAACATCAATCA 57.282 36.000 0.00 0.00 0.00 2.57
2297 2512 8.470805 TCTTGAGTAGGACTAAGAACATCAATC 58.529 37.037 0.00 0.00 0.00 2.67
2298 2513 8.254508 GTCTTGAGTAGGACTAAGAACATCAAT 58.745 37.037 0.00 0.00 31.64 2.57
2299 2514 7.451877 AGTCTTGAGTAGGACTAAGAACATCAA 59.548 37.037 0.00 0.00 40.49 2.57
2300 2515 6.948886 AGTCTTGAGTAGGACTAAGAACATCA 59.051 38.462 0.00 0.00 40.49 3.07
2301 2516 7.399245 AGTCTTGAGTAGGACTAAGAACATC 57.601 40.000 0.00 0.00 40.49 3.06
2302 2517 6.094325 CGAGTCTTGAGTAGGACTAAGAACAT 59.906 42.308 0.00 0.00 42.06 2.71
2303 2518 5.411977 CGAGTCTTGAGTAGGACTAAGAACA 59.588 44.000 0.00 0.00 42.06 3.18
2304 2519 5.412286 ACGAGTCTTGAGTAGGACTAAGAAC 59.588 44.000 0.00 0.00 42.06 3.01
2305 2520 5.558818 ACGAGTCTTGAGTAGGACTAAGAA 58.441 41.667 0.00 0.00 42.06 2.52
2306 2521 5.163281 ACGAGTCTTGAGTAGGACTAAGA 57.837 43.478 0.00 0.00 42.06 2.10
2307 2522 5.873712 TGTACGAGTCTTGAGTAGGACTAAG 59.126 44.000 0.00 0.00 42.06 2.18
2308 2523 5.641209 GTGTACGAGTCTTGAGTAGGACTAA 59.359 44.000 0.00 0.00 42.06 2.24
2309 2524 5.046735 AGTGTACGAGTCTTGAGTAGGACTA 60.047 44.000 0.00 0.00 42.06 2.59
2310 2525 4.002316 GTGTACGAGTCTTGAGTAGGACT 58.998 47.826 0.00 0.00 44.29 3.85
2311 2526 4.002316 AGTGTACGAGTCTTGAGTAGGAC 58.998 47.826 0.00 0.00 0.00 3.85
2312 2527 4.283363 AGTGTACGAGTCTTGAGTAGGA 57.717 45.455 0.00 0.00 0.00 2.94
2313 2528 7.966246 ATATAGTGTACGAGTCTTGAGTAGG 57.034 40.000 0.00 0.00 0.00 3.18
2314 2529 9.695526 ACTATATAGTGTACGAGTCTTGAGTAG 57.304 37.037 14.71 0.00 34.72 2.57
2316 2531 9.695526 CTACTATATAGTGTACGAGTCTTGAGT 57.304 37.037 23.09 0.00 37.10 3.41
2317 2532 9.911138 TCTACTATATAGTGTACGAGTCTTGAG 57.089 37.037 23.09 9.28 37.10 3.02
2318 2533 9.911138 CTCTACTATATAGTGTACGAGTCTTGA 57.089 37.037 23.09 0.08 37.10 3.02
2319 2534 9.695526 ACTCTACTATATAGTGTACGAGTCTTG 57.304 37.037 23.09 8.50 37.10 3.02
2377 2592 9.260002 GCAAAGAAAATGGAAGAAAGAAATACA 57.740 29.630 0.00 0.00 0.00 2.29
2378 2593 9.481340 AGCAAAGAAAATGGAAGAAAGAAATAC 57.519 29.630 0.00 0.00 0.00 1.89
2380 2595 8.969260 AAGCAAAGAAAATGGAAGAAAGAAAT 57.031 26.923 0.00 0.00 0.00 2.17
2381 2596 8.667463 CAAAGCAAAGAAAATGGAAGAAAGAAA 58.333 29.630 0.00 0.00 0.00 2.52
2382 2597 7.823799 ACAAAGCAAAGAAAATGGAAGAAAGAA 59.176 29.630 0.00 0.00 0.00 2.52
2383 2598 7.330262 ACAAAGCAAAGAAAATGGAAGAAAGA 58.670 30.769 0.00 0.00 0.00 2.52
2384 2599 7.543947 ACAAAGCAAAGAAAATGGAAGAAAG 57.456 32.000 0.00 0.00 0.00 2.62
2385 2600 7.920160 AACAAAGCAAAGAAAATGGAAGAAA 57.080 28.000 0.00 0.00 0.00 2.52
2386 2601 7.920160 AAACAAAGCAAAGAAAATGGAAGAA 57.080 28.000 0.00 0.00 0.00 2.52
2387 2602 7.920160 AAAACAAAGCAAAGAAAATGGAAGA 57.080 28.000 0.00 0.00 0.00 2.87
2422 2637 9.996554 AGGAAAACAAAGAAAAGAAAAGAAGAA 57.003 25.926 0.00 0.00 0.00 2.52
2423 2638 9.639601 GAGGAAAACAAAGAAAAGAAAAGAAGA 57.360 29.630 0.00 0.00 0.00 2.87
2424 2639 9.645059 AGAGGAAAACAAAGAAAAGAAAAGAAG 57.355 29.630 0.00 0.00 0.00 2.85
2425 2640 9.996554 AAGAGGAAAACAAAGAAAAGAAAAGAA 57.003 25.926 0.00 0.00 0.00 2.52
2426 2641 9.639601 GAAGAGGAAAACAAAGAAAAGAAAAGA 57.360 29.630 0.00 0.00 0.00 2.52
2427 2642 9.645059 AGAAGAGGAAAACAAAGAAAAGAAAAG 57.355 29.630 0.00 0.00 0.00 2.27
2428 2643 9.996554 AAGAAGAGGAAAACAAAGAAAAGAAAA 57.003 25.926 0.00 0.00 0.00 2.29
2429 2644 9.996554 AAAGAAGAGGAAAACAAAGAAAAGAAA 57.003 25.926 0.00 0.00 0.00 2.52
2430 2645 9.996554 AAAAGAAGAGGAAAACAAAGAAAAGAA 57.003 25.926 0.00 0.00 0.00 2.52
2431 2646 9.423061 CAAAAGAAGAGGAAAACAAAGAAAAGA 57.577 29.630 0.00 0.00 0.00 2.52
2432 2647 9.208022 ACAAAAGAAGAGGAAAACAAAGAAAAG 57.792 29.630 0.00 0.00 0.00 2.27
2433 2648 9.554395 AACAAAAGAAGAGGAAAACAAAGAAAA 57.446 25.926 0.00 0.00 0.00 2.29
2434 2649 9.554395 AAACAAAAGAAGAGGAAAACAAAGAAA 57.446 25.926 0.00 0.00 0.00 2.52
2435 2650 8.987890 CAAACAAAAGAAGAGGAAAACAAAGAA 58.012 29.630 0.00 0.00 0.00 2.52
2436 2651 8.147704 ACAAACAAAAGAAGAGGAAAACAAAGA 58.852 29.630 0.00 0.00 0.00 2.52
2437 2652 8.310406 ACAAACAAAAGAAGAGGAAAACAAAG 57.690 30.769 0.00 0.00 0.00 2.77
2438 2653 8.669946 AACAAACAAAAGAAGAGGAAAACAAA 57.330 26.923 0.00 0.00 0.00 2.83
2439 2654 8.669946 AAACAAACAAAAGAAGAGGAAAACAA 57.330 26.923 0.00 0.00 0.00 2.83
2440 2655 8.669946 AAAACAAACAAAAGAAGAGGAAAACA 57.330 26.923 0.00 0.00 0.00 2.83
2441 2656 8.227791 GGAAAACAAACAAAAGAAGAGGAAAAC 58.772 33.333 0.00 0.00 0.00 2.43
2442 2657 8.154203 AGGAAAACAAACAAAAGAAGAGGAAAA 58.846 29.630 0.00 0.00 0.00 2.29
2443 2658 7.676004 AGGAAAACAAACAAAAGAAGAGGAAA 58.324 30.769 0.00 0.00 0.00 3.13
2444 2659 7.239763 AGGAAAACAAACAAAAGAAGAGGAA 57.760 32.000 0.00 0.00 0.00 3.36
2445 2660 6.850752 AGGAAAACAAACAAAAGAAGAGGA 57.149 33.333 0.00 0.00 0.00 3.71
2446 2661 7.819415 AGAAAGGAAAACAAACAAAAGAAGAGG 59.181 33.333 0.00 0.00 0.00 3.69
2447 2662 8.763049 AGAAAGGAAAACAAACAAAAGAAGAG 57.237 30.769 0.00 0.00 0.00 2.85
2448 2663 9.554395 AAAGAAAGGAAAACAAACAAAAGAAGA 57.446 25.926 0.00 0.00 0.00 2.87
2480 2695 9.413734 AGAAGAAATGAGGAAAAGAAAAGAGAA 57.586 29.630 0.00 0.00 0.00 2.87
2481 2696 8.986929 AGAAGAAATGAGGAAAAGAAAAGAGA 57.013 30.769 0.00 0.00 0.00 3.10
2482 2697 9.676195 GAAGAAGAAATGAGGAAAAGAAAAGAG 57.324 33.333 0.00 0.00 0.00 2.85
2483 2698 9.413734 AGAAGAAGAAATGAGGAAAAGAAAAGA 57.586 29.630 0.00 0.00 0.00 2.52
2487 2702 9.807649 CAAAAGAAGAAGAAATGAGGAAAAGAA 57.192 29.630 0.00 0.00 0.00 2.52
2488 2703 8.971073 ACAAAAGAAGAAGAAATGAGGAAAAGA 58.029 29.630 0.00 0.00 0.00 2.52
2489 2704 9.591792 AACAAAAGAAGAAGAAATGAGGAAAAG 57.408 29.630 0.00 0.00 0.00 2.27
2490 2705 9.586435 GAACAAAAGAAGAAGAAATGAGGAAAA 57.414 29.630 0.00 0.00 0.00 2.29
2491 2706 8.971073 AGAACAAAAGAAGAAGAAATGAGGAAA 58.029 29.630 0.00 0.00 0.00 3.13
2492 2707 8.525290 AGAACAAAAGAAGAAGAAATGAGGAA 57.475 30.769 0.00 0.00 0.00 3.36
2493 2708 8.408601 CAAGAACAAAAGAAGAAGAAATGAGGA 58.591 33.333 0.00 0.00 0.00 3.71
2494 2709 8.193438 ACAAGAACAAAAGAAGAAGAAATGAGG 58.807 33.333 0.00 0.00 0.00 3.86
2495 2710 9.578439 AACAAGAACAAAAGAAGAAGAAATGAG 57.422 29.630 0.00 0.00 0.00 2.90
2496 2711 9.357652 CAACAAGAACAAAAGAAGAAGAAATGA 57.642 29.630 0.00 0.00 0.00 2.57
2497 2712 9.143631 ACAACAAGAACAAAAGAAGAAGAAATG 57.856 29.630 0.00 0.00 0.00 2.32
2498 2713 9.710900 AACAACAAGAACAAAAGAAGAAGAAAT 57.289 25.926 0.00 0.00 0.00 2.17
2499 2714 9.541143 AAACAACAAGAACAAAAGAAGAAGAAA 57.459 25.926 0.00 0.00 0.00 2.52
2500 2715 9.541143 AAAACAACAAGAACAAAAGAAGAAGAA 57.459 25.926 0.00 0.00 0.00 2.52
2501 2716 8.977505 CAAAACAACAAGAACAAAAGAAGAAGA 58.022 29.630 0.00 0.00 0.00 2.87
2502 2717 8.764287 ACAAAACAACAAGAACAAAAGAAGAAG 58.236 29.630 0.00 0.00 0.00 2.85
2503 2718 8.655651 ACAAAACAACAAGAACAAAAGAAGAA 57.344 26.923 0.00 0.00 0.00 2.52
2504 2719 8.547069 CAACAAAACAACAAGAACAAAAGAAGA 58.453 29.630 0.00 0.00 0.00 2.87
2505 2720 8.334632 ACAACAAAACAACAAGAACAAAAGAAG 58.665 29.630 0.00 0.00 0.00 2.85
2506 2721 8.202745 ACAACAAAACAACAAGAACAAAAGAA 57.797 26.923 0.00 0.00 0.00 2.52
2507 2722 7.708752 AGACAACAAAACAACAAGAACAAAAGA 59.291 29.630 0.00 0.00 0.00 2.52
2508 2723 7.850501 AGACAACAAAACAACAAGAACAAAAG 58.149 30.769 0.00 0.00 0.00 2.27
2509 2724 7.778470 AGACAACAAAACAACAAGAACAAAA 57.222 28.000 0.00 0.00 0.00 2.44
2510 2725 7.778470 AAGACAACAAAACAACAAGAACAAA 57.222 28.000 0.00 0.00 0.00 2.83
2511 2726 9.134734 GATAAGACAACAAAACAACAAGAACAA 57.865 29.630 0.00 0.00 0.00 2.83
2512 2727 8.519526 AGATAAGACAACAAAACAACAAGAACA 58.480 29.630 0.00 0.00 0.00 3.18
2513 2728 8.911247 AGATAAGACAACAAAACAACAAGAAC 57.089 30.769 0.00 0.00 0.00 3.01
2514 2729 9.921637 AAAGATAAGACAACAAAACAACAAGAA 57.078 25.926 0.00 0.00 0.00 2.52
2515 2730 9.921637 AAAAGATAAGACAACAAAACAACAAGA 57.078 25.926 0.00 0.00 0.00 3.02
2516 2731 9.956797 CAAAAGATAAGACAACAAAACAACAAG 57.043 29.630 0.00 0.00 0.00 3.16
2517 2732 9.698309 TCAAAAGATAAGACAACAAAACAACAA 57.302 25.926 0.00 0.00 0.00 2.83
2518 2733 9.698309 TTCAAAAGATAAGACAACAAAACAACA 57.302 25.926 0.00 0.00 0.00 3.33
2519 2734 9.952341 GTTCAAAAGATAAGACAACAAAACAAC 57.048 29.630 0.00 0.00 0.00 3.32
2520 2735 9.698309 TGTTCAAAAGATAAGACAACAAAACAA 57.302 25.926 0.00 0.00 0.00 2.83
2521 2736 9.868277 ATGTTCAAAAGATAAGACAACAAAACA 57.132 25.926 0.00 0.00 0.00 2.83
2523 2738 9.868277 ACATGTTCAAAAGATAAGACAACAAAA 57.132 25.926 0.00 0.00 0.00 2.44
2527 2742 9.612620 CCTTACATGTTCAAAAGATAAGACAAC 57.387 33.333 2.30 0.00 0.00 3.32
2528 2743 9.567776 TCCTTACATGTTCAAAAGATAAGACAA 57.432 29.630 2.30 0.00 0.00 3.18
2529 2744 9.567776 TTCCTTACATGTTCAAAAGATAAGACA 57.432 29.630 2.30 0.00 0.00 3.41
2534 2749 9.567776 TGTCTTTCCTTACATGTTCAAAAGATA 57.432 29.630 19.43 16.31 34.77 1.98
2535 2750 8.463930 TGTCTTTCCTTACATGTTCAAAAGAT 57.536 30.769 19.43 0.00 34.77 2.40
2536 2751 7.873719 TGTCTTTCCTTACATGTTCAAAAGA 57.126 32.000 2.30 11.66 0.00 2.52
2537 2752 7.649306 CCTTGTCTTTCCTTACATGTTCAAAAG 59.351 37.037 2.30 9.59 0.00 2.27
2538 2753 7.340743 TCCTTGTCTTTCCTTACATGTTCAAAA 59.659 33.333 2.30 0.00 0.00 2.44
2539 2754 6.831353 TCCTTGTCTTTCCTTACATGTTCAAA 59.169 34.615 2.30 0.00 0.00 2.69
2540 2755 6.361433 TCCTTGTCTTTCCTTACATGTTCAA 58.639 36.000 2.30 0.00 0.00 2.69
2541 2756 5.935945 TCCTTGTCTTTCCTTACATGTTCA 58.064 37.500 2.30 0.00 0.00 3.18
2542 2757 5.106515 GCTCCTTGTCTTTCCTTACATGTTC 60.107 44.000 2.30 0.00 0.00 3.18
2543 2758 4.762251 GCTCCTTGTCTTTCCTTACATGTT 59.238 41.667 2.30 0.00 0.00 2.71
2544 2759 4.202461 TGCTCCTTGTCTTTCCTTACATGT 60.202 41.667 2.69 2.69 0.00 3.21
2545 2760 4.326826 TGCTCCTTGTCTTTCCTTACATG 58.673 43.478 0.00 0.00 0.00 3.21
2546 2761 4.640771 TGCTCCTTGTCTTTCCTTACAT 57.359 40.909 0.00 0.00 0.00 2.29
2547 2762 4.431416 TTGCTCCTTGTCTTTCCTTACA 57.569 40.909 0.00 0.00 0.00 2.41
2548 2763 4.156739 CCATTGCTCCTTGTCTTTCCTTAC 59.843 45.833 0.00 0.00 0.00 2.34
2549 2764 4.335416 CCATTGCTCCTTGTCTTTCCTTA 58.665 43.478 0.00 0.00 0.00 2.69
2550 2765 3.160269 CCATTGCTCCTTGTCTTTCCTT 58.840 45.455 0.00 0.00 0.00 3.36
2551 2766 2.556114 CCCATTGCTCCTTGTCTTTCCT 60.556 50.000 0.00 0.00 0.00 3.36
2552 2767 1.821136 CCCATTGCTCCTTGTCTTTCC 59.179 52.381 0.00 0.00 0.00 3.13
2553 2768 1.821136 CCCCATTGCTCCTTGTCTTTC 59.179 52.381 0.00 0.00 0.00 2.62
2554 2769 1.147817 ACCCCATTGCTCCTTGTCTTT 59.852 47.619 0.00 0.00 0.00 2.52
2555 2770 0.779997 ACCCCATTGCTCCTTGTCTT 59.220 50.000 0.00 0.00 0.00 3.01
2556 2771 0.038744 CACCCCATTGCTCCTTGTCT 59.961 55.000 0.00 0.00 0.00 3.41
2557 2772 0.967380 CCACCCCATTGCTCCTTGTC 60.967 60.000 0.00 0.00 0.00 3.18
2558 2773 1.077265 CCACCCCATTGCTCCTTGT 59.923 57.895 0.00 0.00 0.00 3.16
2559 2774 1.077265 ACCACCCCATTGCTCCTTG 59.923 57.895 0.00 0.00 0.00 3.61
2560 2775 1.077265 CACCACCCCATTGCTCCTT 59.923 57.895 0.00 0.00 0.00 3.36
2561 2776 1.852157 TCACCACCCCATTGCTCCT 60.852 57.895 0.00 0.00 0.00 3.69
2562 2777 1.379044 CTCACCACCCCATTGCTCC 60.379 63.158 0.00 0.00 0.00 4.70
2563 2778 1.379044 CCTCACCACCCCATTGCTC 60.379 63.158 0.00 0.00 0.00 4.26
2564 2779 2.765969 CCTCACCACCCCATTGCT 59.234 61.111 0.00 0.00 0.00 3.91
2565 2780 2.362889 CCCTCACCACCCCATTGC 60.363 66.667 0.00 0.00 0.00 3.56
2566 2781 2.215451 CTCCCCTCACCACCCCATTG 62.215 65.000 0.00 0.00 0.00 2.82
2567 2782 1.930656 CTCCCCTCACCACCCCATT 60.931 63.158 0.00 0.00 0.00 3.16
2568 2783 2.286425 CTCCCCTCACCACCCCAT 60.286 66.667 0.00 0.00 0.00 4.00
2569 2784 4.675303 CCTCCCCTCACCACCCCA 62.675 72.222 0.00 0.00 0.00 4.96
2572 2787 3.403558 GAGCCTCCCCTCACCACC 61.404 72.222 0.00 0.00 0.00 4.61
2573 2788 2.224159 TTGAGCCTCCCCTCACCAC 61.224 63.158 0.00 0.00 41.28 4.16
2574 2789 2.206900 TTGAGCCTCCCCTCACCA 59.793 61.111 0.00 0.00 41.28 4.17
2575 2790 2.671682 GTTGAGCCTCCCCTCACC 59.328 66.667 0.00 0.00 41.28 4.02
2576 2791 2.224159 TGGTTGAGCCTCCCCTCAC 61.224 63.158 0.00 0.00 41.28 3.51
2577 2792 2.206900 TGGTTGAGCCTCCCCTCA 59.793 61.111 0.00 0.00 39.94 3.86
2578 2793 0.617820 TAGTGGTTGAGCCTCCCCTC 60.618 60.000 0.00 0.00 38.35 4.30
2579 2794 0.178873 TTAGTGGTTGAGCCTCCCCT 60.179 55.000 0.00 0.00 38.35 4.79
2580 2795 0.035343 GTTAGTGGTTGAGCCTCCCC 60.035 60.000 0.00 0.00 38.35 4.81
2581 2796 0.984995 AGTTAGTGGTTGAGCCTCCC 59.015 55.000 0.00 0.00 38.35 4.30
2582 2797 2.427506 CAAGTTAGTGGTTGAGCCTCC 58.572 52.381 0.00 0.00 38.35 4.30
2583 2798 2.038557 TCCAAGTTAGTGGTTGAGCCTC 59.961 50.000 0.00 0.00 39.88 4.70
2584 2799 2.039084 CTCCAAGTTAGTGGTTGAGCCT 59.961 50.000 0.00 0.00 39.88 4.58
2585 2800 2.427506 CTCCAAGTTAGTGGTTGAGCC 58.572 52.381 0.00 0.00 39.88 4.70
2586 2801 1.807142 GCTCCAAGTTAGTGGTTGAGC 59.193 52.381 0.00 0.00 39.88 4.26
2587 2802 3.409026 AGCTCCAAGTTAGTGGTTGAG 57.591 47.619 0.00 0.00 39.88 3.02
2588 2803 3.857157 AAGCTCCAAGTTAGTGGTTGA 57.143 42.857 0.00 0.00 39.88 3.18
2589 2804 4.452455 CACTAAGCTCCAAGTTAGTGGTTG 59.548 45.833 11.57 0.00 46.65 3.77
2590 2805 4.642429 CACTAAGCTCCAAGTTAGTGGTT 58.358 43.478 11.57 0.00 46.65 3.67
2591 2806 4.273148 CACTAAGCTCCAAGTTAGTGGT 57.727 45.455 11.57 0.00 46.65 4.16
2594 2809 3.901844 TGACCACTAAGCTCCAAGTTAGT 59.098 43.478 0.00 0.00 39.56 2.24
2595 2810 4.021016 AGTGACCACTAAGCTCCAAGTTAG 60.021 45.833 0.03 0.00 40.43 2.34
2596 2811 3.901844 AGTGACCACTAAGCTCCAAGTTA 59.098 43.478 0.03 0.00 40.43 2.24
2597 2812 2.706190 AGTGACCACTAAGCTCCAAGTT 59.294 45.455 0.03 0.00 40.43 2.66
2598 2813 2.330216 AGTGACCACTAAGCTCCAAGT 58.670 47.619 0.03 0.00 40.43 3.16
2599 2814 3.409026 AAGTGACCACTAAGCTCCAAG 57.591 47.619 2.78 0.00 41.58 3.61
2600 2815 4.967084 TTAAGTGACCACTAAGCTCCAA 57.033 40.909 2.78 0.00 41.58 3.53
2601 2816 5.499004 AATTAAGTGACCACTAAGCTCCA 57.501 39.130 2.78 0.00 41.58 3.86
2602 2817 6.819397 AAAATTAAGTGACCACTAAGCTCC 57.181 37.500 2.78 0.00 41.58 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.