Multiple sequence alignment - TraesCS5B01G466100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G466100 chr5B 100.000 6572 0 0 1 6572 640269944 640276515 0.000000e+00 12137.0
1 TraesCS5B01G466100 chr5B 82.773 238 32 6 229 464 640307340 640307570 3.110000e-48 204.0
2 TraesCS5B01G466100 chr5B 90.789 76 7 0 1462 1537 616645245 616645320 1.170000e-17 102.0
3 TraesCS5B01G466100 chr5B 90.625 64 4 1 570 631 382733389 382733326 4.220000e-12 84.2
4 TraesCS5B01G466100 chr5B 94.231 52 3 0 570 621 612328943 612328892 5.460000e-11 80.5
5 TraesCS5B01G466100 chr5D 94.457 3121 134 19 2943 6034 509548997 509552107 0.000000e+00 4769.0
6 TraesCS5B01G466100 chr5D 87.329 1389 97 35 1178 2529 509546904 509548250 0.000000e+00 1517.0
7 TraesCS5B01G466100 chr5D 91.142 429 18 5 1 428 509543517 509543926 1.240000e-156 564.0
8 TraesCS5B01G466100 chr5D 79.095 464 59 23 663 1111 509545804 509546244 1.080000e-72 285.0
9 TraesCS5B01G466100 chr5D 89.764 127 10 3 2516 2639 509548335 509548461 6.820000e-35 159.0
10 TraesCS5B01G466100 chr5D 89.431 123 8 3 2638 2756 509548522 509548643 4.110000e-32 150.0
11 TraesCS5B01G466100 chr5D 89.474 76 8 0 1462 1537 497776151 497776226 5.420000e-16 97.1
12 TraesCS5B01G466100 chr5D 91.803 61 2 1 4738 4795 509550944 509551004 1.520000e-11 82.4
13 TraesCS5B01G466100 chr5D 97.297 37 1 0 493 529 47529347 47529311 5.500000e-06 63.9
14 TraesCS5B01G466100 chr5A 93.247 3080 143 29 3008 6043 636927960 636931018 0.000000e+00 4475.0
15 TraesCS5B01G466100 chr5A 90.562 837 43 15 1683 2502 636926237 636927054 0.000000e+00 1075.0
16 TraesCS5B01G466100 chr5A 90.351 798 28 16 932 1690 636924996 636925783 0.000000e+00 1002.0
17 TraesCS5B01G466100 chr5A 90.836 622 40 7 1 618 636923661 636924269 0.000000e+00 817.0
18 TraesCS5B01G466100 chr5A 91.441 222 15 2 2538 2756 636927162 636927382 1.070000e-77 302.0
19 TraesCS5B01G466100 chr5A 83.858 254 23 7 236 485 636984364 636984603 6.630000e-55 226.0
20 TraesCS5B01G466100 chr5A 90.000 80 5 2 647 723 636924773 636924852 4.190000e-17 100.0
21 TraesCS5B01G466100 chr5A 93.548 62 4 0 570 631 698316853 698316914 7.020000e-15 93.5
22 TraesCS5B01G466100 chr5A 88.158 76 9 0 1462 1537 621748349 621748424 2.520000e-14 91.6
23 TraesCS5B01G466100 chr5A 91.935 62 2 3 4887 4947 636929707 636929766 4.220000e-12 84.2
24 TraesCS5B01G466100 chr5A 93.023 43 3 0 2757 2799 636927868 636927910 5.500000e-06 63.9
25 TraesCS5B01G466100 chr3A 99.151 471 4 0 6102 6572 609988265 609988735 0.000000e+00 848.0
26 TraesCS5B01G466100 chr3A 91.667 60 3 2 6042 6101 513430514 513430457 1.520000e-11 82.4
27 TraesCS5B01G466100 chr3A 85.714 56 4 3 486 538 52981099 52981153 1.000000e-03 56.5
28 TraesCS5B01G466100 chr3B 94.627 335 16 2 6103 6435 612313008 612312674 9.770000e-143 518.0
29 TraesCS5B01G466100 chr3B 94.964 139 7 0 6434 6572 612312646 612312508 1.110000e-52 219.0
30 TraesCS5B01G466100 chr3B 90.083 121 12 0 6452 6572 43594802 43594922 2.450000e-34 158.0
31 TraesCS5B01G466100 chr3B 100.000 28 0 0 593 620 23783832 23783805 1.200000e-02 52.8
32 TraesCS5B01G466100 chr7A 85.669 314 36 1 6102 6415 31003509 31003205 8.220000e-84 322.0
33 TraesCS5B01G466100 chr7A 85.531 311 36 1 6102 6412 299535362 299535663 3.820000e-82 316.0
34 TraesCS5B01G466100 chr7A 97.810 137 2 1 2795 2931 343843711 343843846 1.100000e-57 235.0
35 TraesCS5B01G466100 chr7A 100.000 32 0 0 6067 6098 648564977 648564946 7.120000e-05 60.2
36 TraesCS5B01G466100 chr6A 85.852 311 35 1 6102 6412 389563271 389563572 8.220000e-84 322.0
37 TraesCS5B01G466100 chr4A 85.852 311 35 1 6102 6412 99000740 99001041 8.220000e-84 322.0
38 TraesCS5B01G466100 chr4A 97.842 139 3 0 2787 2925 729151979 729151841 2.370000e-59 241.0
39 TraesCS5B01G466100 chr2A 85.852 311 35 1 6102 6412 11796392 11796091 8.220000e-84 322.0
40 TraesCS5B01G466100 chr2A 90.083 121 12 0 6452 6572 11796094 11795974 2.450000e-34 158.0
41 TraesCS5B01G466100 chr7B 84.444 315 39 3 6101 6415 721814677 721814373 1.070000e-77 302.0
42 TraesCS5B01G466100 chr7B 98.507 134 1 1 2795 2928 372834980 372835112 1.100000e-57 235.0
43 TraesCS5B01G466100 chr7B 90.909 121 11 0 6452 6572 721814379 721814259 5.270000e-36 163.0
44 TraesCS5B01G466100 chr4B 83.387 313 41 4 6104 6415 554316434 554316132 5.020000e-71 279.0
45 TraesCS5B01G466100 chr4B 100.000 131 0 0 2796 2926 180671291 180671161 6.580000e-60 243.0
46 TraesCS5B01G466100 chr4B 95.270 148 6 1 2794 2941 119338519 119338665 3.960000e-57 233.0
47 TraesCS5B01G466100 chr4B 90.909 121 10 1 6452 6572 554316138 554316019 1.900000e-35 161.0
48 TraesCS5B01G466100 chr4B 92.683 41 3 0 490 530 95869602 95869562 7.120000e-05 60.2
49 TraesCS5B01G466100 chr2D 98.519 135 2 0 2795 2929 561025619 561025753 8.520000e-59 239.0
50 TraesCS5B01G466100 chr3D 97.794 136 3 0 2790 2925 496172890 496172755 1.100000e-57 235.0
51 TraesCS5B01G466100 chr3D 76.496 234 25 16 6105 6325 131234126 131233910 4.190000e-17 100.0
52 TraesCS5B01G466100 chr1B 97.101 138 4 0 2788 2925 623732121 623731984 3.960000e-57 233.0
53 TraesCS5B01G466100 chr1B 87.952 83 4 5 6096 6173 266945367 266945448 7.020000e-15 93.5
54 TraesCS5B01G466100 chr1D 95.714 140 6 0 2791 2930 406733925 406733786 6.630000e-55 226.0
55 TraesCS5B01G466100 chr7D 75.099 253 35 17 6105 6342 564012055 564012294 7.020000e-15 93.5
56 TraesCS5B01G466100 chr7D 93.617 47 2 1 487 533 124782735 124782780 1.180000e-07 69.4
57 TraesCS5B01G466100 chr7D 95.000 40 2 0 490 529 185912445 185912406 5.500000e-06 63.9
58 TraesCS5B01G466100 chr6B 85.227 88 10 3 6105 6191 643518579 643518494 3.260000e-13 87.9
59 TraesCS5B01G466100 chr6D 95.745 47 2 0 585 631 136688848 136688802 7.070000e-10 76.8
60 TraesCS5B01G466100 chr6D 97.368 38 1 0 496 533 452939066 452939103 1.530000e-06 65.8
61 TraesCS5B01G466100 chr2B 97.561 41 0 1 489 529 767896143 767896104 1.180000e-07 69.4
62 TraesCS5B01G466100 chr2B 93.333 45 2 1 581 625 679304178 679304221 1.530000e-06 65.8
63 TraesCS5B01G466100 chr2B 96.875 32 1 0 6042 6073 691421923 691421954 3.000000e-03 54.7
64 TraesCS5B01G466100 chr4D 93.023 43 3 0 589 631 302350301 302350343 5.500000e-06 63.9
65 TraesCS5B01G466100 chr1A 94.872 39 2 0 496 534 515800363 515800401 1.980000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G466100 chr5B 640269944 640276515 6571 False 12137.0000 12137 100.000000 1 6572 1 chr5B.!!$F2 6571
1 TraesCS5B01G466100 chr5D 509543517 509552107 8590 False 1075.2000 4769 89.003000 1 6034 7 chr5D.!!$F2 6033
2 TraesCS5B01G466100 chr5A 636923661 636931018 7357 False 989.8875 4475 91.424375 1 6043 8 chr5A.!!$F4 6042
3 TraesCS5B01G466100 chr3B 612312508 612313008 500 True 368.5000 518 94.795500 6103 6572 2 chr3B.!!$R2 469

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
737 2869 0.107410 AAACCACGAGCAGGTGACAA 60.107 50.0 8.55 0.0 39.86 3.18 F
1552 4343 0.037232 GGTACGCCAAGCTTCTGTCT 60.037 55.0 0.00 0.0 34.09 3.41 F
1554 4345 0.679505 TACGCCAAGCTTCTGTCTGT 59.320 50.0 0.00 0.0 0.00 3.41 F
1728 4985 0.801872 TGCCAATGTCGCACACATAC 59.198 50.0 0.00 0.0 45.77 2.39 F
3219 7198 0.321346 TTGCAGCTGTTGGATCTCGA 59.679 50.0 16.64 0.0 0.00 4.04 F
3755 7744 0.321653 AGGGCAGGTAAAGCTCGTTG 60.322 55.0 0.00 0.0 37.61 4.10 F
5117 9120 0.109342 ACTCTTCAACTGGCTGGTGG 59.891 55.0 9.67 0.0 33.29 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1711 4966 0.247655 GCGTATGTGTGCGACATTGG 60.248 55.000 6.50 1.66 43.20 3.16 R
2907 6882 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12 R
2909 6884 1.201424 AAATGTACTCCCTCCGTCCC 58.799 55.000 0.00 0.00 0.00 4.46 R
3527 7516 2.379972 ACTTCCCGATCAGGTGTAGAG 58.620 52.381 0.00 0.00 38.74 2.43 R
4448 8441 1.746220 AGTGGACGATTTCTCTCCTCG 59.254 52.381 0.00 0.00 38.34 4.63 R
5414 9439 0.379669 CGCCCATCTGCTCATCAAAC 59.620 55.000 0.00 0.00 0.00 2.93 R
6329 10368 0.249398 GGTTGCAGACGGTACTGGAT 59.751 55.000 6.65 0.00 37.98 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 8.158169 TGTGGATCATCATTGTTAATAAGCTC 57.842 34.615 0.00 0.00 0.00 4.09
93 94 5.300034 TCATTGTTAATAAGCTCATGGGCTG 59.700 40.000 23.63 5.21 42.24 4.85
94 95 3.554934 TGTTAATAAGCTCATGGGCTGG 58.445 45.455 23.63 0.00 42.24 4.85
120 121 1.350193 CACGAAACAGACATCCGAGG 58.650 55.000 0.00 0.00 0.00 4.63
137 138 2.744202 CGAGGGATGAAAACTGGTTGAG 59.256 50.000 0.00 0.00 0.00 3.02
158 159 9.687210 GTTGAGATTGTCGGTGTGTATATTATA 57.313 33.333 0.00 0.00 0.00 0.98
215 216 5.003160 CCAAGTAGTGGTGATGAAATGTCA 58.997 41.667 0.00 0.00 43.20 3.58
241 242 1.792949 GTGGCTGTGTACTCGAAAGTG 59.207 52.381 0.00 0.00 36.92 3.16
283 284 7.465353 TTCATTTGAAATGTCTGCCTTCATA 57.535 32.000 16.62 0.00 0.00 2.15
328 329 4.309933 TGTTGCTACTTGATGAGTCACAG 58.690 43.478 0.00 0.00 39.86 3.66
470 570 5.602561 TGCTCTCAGCTATATTGGAAACCTA 59.397 40.000 0.00 0.00 42.97 3.08
479 579 6.150140 GCTATATTGGAAACCTATTGCTCTGG 59.850 42.308 0.00 0.00 0.00 3.86
488 588 3.135530 ACCTATTGCTCTGGGAATCAGTC 59.864 47.826 0.00 0.00 43.76 3.51
499 600 4.410099 TGGGAATCAGTCAGCTTGAAAAT 58.590 39.130 0.00 0.00 0.00 1.82
508 609 8.169977 TCAGTCAGCTTGAAAATTGTTCTTAT 57.830 30.769 0.00 0.00 0.00 1.73
523 2127 9.712305 AATTGTTCTTATATTATGAGACGGAGG 57.288 33.333 0.00 0.00 0.00 4.30
534 2138 3.818180 TGAGACGGAGGGAGTATCTAAC 58.182 50.000 0.00 0.00 31.72 2.34
548 2152 7.362401 GGGAGTATCTAACAGAGTTGTCGTAAA 60.362 40.741 0.00 0.00 33.14 2.01
553 2157 6.339730 TCTAACAGAGTTGTCGTAAACCAAA 58.660 36.000 0.00 0.00 36.23 3.28
565 2169 6.081693 GTCGTAAACCAAAATGGACACATAC 58.918 40.000 2.85 0.00 40.96 2.39
566 2170 5.181622 TCGTAAACCAAAATGGACACATACC 59.818 40.000 2.85 0.00 40.96 2.73
585 2189 3.142393 CCAGTGGCGGATCTAGGG 58.858 66.667 0.00 0.00 0.00 3.53
586 2190 2.423446 CAGTGGCGGATCTAGGGC 59.577 66.667 0.00 0.00 0.00 5.19
588 2192 3.942439 GTGGCGGATCTAGGGCCC 61.942 72.222 16.46 16.46 46.31 5.80
589 2193 4.490606 TGGCGGATCTAGGGCCCA 62.491 66.667 27.56 9.36 46.31 5.36
590 2194 3.631046 GGCGGATCTAGGGCCCAG 61.631 72.222 27.56 19.27 41.01 4.45
591 2195 3.631046 GCGGATCTAGGGCCCAGG 61.631 72.222 27.56 16.44 0.00 4.45
618 2222 1.134610 GCATGAGGCCCAAATCCTTTG 60.135 52.381 0.00 0.00 40.32 2.77
619 2223 2.181975 CATGAGGCCCAAATCCTTTGT 58.818 47.619 0.00 0.00 38.98 2.83
620 2224 3.364549 CATGAGGCCCAAATCCTTTGTA 58.635 45.455 0.00 0.00 38.98 2.41
621 2225 3.756082 TGAGGCCCAAATCCTTTGTAT 57.244 42.857 0.00 0.00 38.98 2.29
622 2226 4.059773 TGAGGCCCAAATCCTTTGTATT 57.940 40.909 0.00 0.00 38.98 1.89
625 2229 4.026052 AGGCCCAAATCCTTTGTATTCTG 58.974 43.478 0.00 0.00 38.98 3.02
627 2231 4.953579 GGCCCAAATCCTTTGTATTCTGTA 59.046 41.667 0.00 0.00 38.98 2.74
628 2232 5.067805 GGCCCAAATCCTTTGTATTCTGTAG 59.932 44.000 0.00 0.00 38.98 2.74
629 2233 5.450550 GCCCAAATCCTTTGTATTCTGTAGC 60.451 44.000 0.00 0.00 38.98 3.58
646 2552 7.270757 TCTGTAGCAGCAAAATTCTTACAAA 57.729 32.000 0.00 0.00 0.00 2.83
648 2554 8.023128 TCTGTAGCAGCAAAATTCTTACAAATC 58.977 33.333 0.00 0.00 0.00 2.17
649 2555 7.885297 TGTAGCAGCAAAATTCTTACAAATCT 58.115 30.769 0.00 0.00 0.00 2.40
651 2557 7.880059 AGCAGCAAAATTCTTACAAATCTTC 57.120 32.000 0.00 0.00 0.00 2.87
653 2559 6.183360 GCAGCAAAATTCTTACAAATCTTCCG 60.183 38.462 0.00 0.00 0.00 4.30
655 2561 5.576774 GCAAAATTCTTACAAATCTTCCGGG 59.423 40.000 0.00 0.00 0.00 5.73
656 2562 5.914898 AAATTCTTACAAATCTTCCGGGG 57.085 39.130 0.00 0.00 0.00 5.73
657 2563 3.359695 TTCTTACAAATCTTCCGGGGG 57.640 47.619 0.00 0.00 0.00 5.40
661 2787 0.395724 ACAAATCTTCCGGGGGATGC 60.396 55.000 0.00 0.00 0.00 3.91
696 2822 1.738099 CGCCTGGACGTCTCCTTTG 60.738 63.158 16.46 0.00 37.48 2.77
723 2855 2.597217 CCGCCTGGAAGCAAACCA 60.597 61.111 0.00 0.00 37.49 3.67
731 2863 1.576421 GAAGCAAACCACGAGCAGG 59.424 57.895 0.00 0.00 0.00 4.85
732 2864 1.152963 AAGCAAACCACGAGCAGGT 60.153 52.632 0.00 0.00 42.34 4.00
733 2865 1.447317 AAGCAAACCACGAGCAGGTG 61.447 55.000 0.00 0.54 39.86 4.00
735 2867 1.941812 CAAACCACGAGCAGGTGAC 59.058 57.895 8.55 0.00 39.86 3.67
736 2868 0.813610 CAAACCACGAGCAGGTGACA 60.814 55.000 8.55 0.00 39.86 3.58
737 2869 0.107410 AAACCACGAGCAGGTGACAA 60.107 50.000 8.55 0.00 39.86 3.18
738 2870 0.814010 AACCACGAGCAGGTGACAAC 60.814 55.000 8.55 0.00 39.86 3.32
801 2934 1.203994 CCTTACGGCTATATCACCCCG 59.796 57.143 0.00 0.00 45.80 5.73
803 2936 1.538047 TACGGCTATATCACCCCGAC 58.462 55.000 4.82 0.00 43.20 4.79
804 2937 0.178970 ACGGCTATATCACCCCGACT 60.179 55.000 4.82 0.00 43.20 4.18
805 2938 0.526662 CGGCTATATCACCCCGACTC 59.473 60.000 0.00 0.00 43.20 3.36
828 2962 2.761465 CCCCTCTCCTCCATTGCCC 61.761 68.421 0.00 0.00 0.00 5.36
861 3004 2.352805 CCTCCCTTGTGAGGTGCC 59.647 66.667 0.00 0.00 45.76 5.01
874 3017 4.748144 GTGCCCCTCCTTGCCAGG 62.748 72.222 0.00 0.00 42.50 4.45
878 3021 3.415087 CCCTCCTTGCCAGGGGAG 61.415 72.222 4.96 4.93 45.08 4.30
879 3022 2.285668 CCTCCTTGCCAGGGGAGA 60.286 66.667 4.96 0.00 45.08 3.71
880 3023 1.925455 CCTCCTTGCCAGGGGAGAA 60.925 63.158 4.96 0.00 45.08 2.87
881 3024 1.606531 CTCCTTGCCAGGGGAGAAG 59.393 63.158 0.00 0.00 45.08 2.85
882 3025 2.044551 CCTTGCCAGGGGAGAAGC 60.045 66.667 0.00 0.00 36.36 3.86
883 3026 2.044551 CTTGCCAGGGGAGAAGCC 60.045 66.667 0.00 0.00 0.00 4.35
918 3061 0.462759 GCTATTTGCTCGGAGGTGCT 60.463 55.000 7.20 0.00 38.95 4.40
920 3063 0.179111 TATTTGCTCGGAGGTGCTCG 60.179 55.000 7.20 0.00 0.00 5.03
966 3109 4.021925 GGGAGCTGAAGGTGGCGT 62.022 66.667 0.00 0.00 0.00 5.68
991 3148 0.944386 CAGAAGGTGAACGGGTTGTG 59.056 55.000 0.00 0.00 0.00 3.33
1032 3193 2.203195 TGTGCCCTGGCGATATGC 60.203 61.111 3.32 0.00 45.51 3.14
1111 3272 0.992757 GCTAGAGCGCGCGTAAGTAG 60.993 60.000 32.35 24.49 41.68 2.57
1113 3274 1.524355 CTAGAGCGCGCGTAAGTAGTA 59.476 52.381 32.35 12.05 41.68 1.82
1169 3932 6.816640 TGTACAACAAGGATCATTGTAGCTAC 59.183 38.462 24.61 20.92 42.49 3.58
1170 3933 5.804639 ACAACAAGGATCATTGTAGCTACA 58.195 37.500 24.61 22.67 42.49 2.74
1171 3934 5.877012 ACAACAAGGATCATTGTAGCTACAG 59.123 40.000 24.61 15.53 42.49 2.74
1172 3935 5.683876 ACAAGGATCATTGTAGCTACAGT 57.316 39.130 23.29 20.28 41.53 3.55
1173 3936 6.791867 ACAAGGATCATTGTAGCTACAGTA 57.208 37.500 23.29 13.28 41.53 2.74
1175 3938 8.478775 ACAAGGATCATTGTAGCTACAGTATA 57.521 34.615 23.29 14.65 41.53 1.47
1307 4070 2.357154 GGATCAACACCCCAATAGCTGT 60.357 50.000 0.00 0.00 0.00 4.40
1322 4085 6.146510 CCAATAGCTGTTGTTTCTGTACGTAA 59.853 38.462 20.18 0.00 0.00 3.18
1323 4086 6.701432 ATAGCTGTTGTTTCTGTACGTAAC 57.299 37.500 0.00 0.00 0.00 2.50
1324 4087 4.690122 AGCTGTTGTTTCTGTACGTAACT 58.310 39.130 0.00 0.00 0.00 2.24
1366 4129 2.414481 CTGAATCAACTGTGCTTCCTCG 59.586 50.000 0.00 0.00 30.32 4.63
1385 4159 5.238650 TCCTCGGAGTTGATTTCTTTTTCAC 59.761 40.000 4.02 0.00 0.00 3.18
1527 4317 1.627329 AGCTTCTCTCCTTGTCATGCA 59.373 47.619 0.00 0.00 0.00 3.96
1550 4341 0.396811 AAGGTACGCCAAGCTTCTGT 59.603 50.000 0.00 0.00 31.77 3.41
1552 4343 0.037232 GGTACGCCAAGCTTCTGTCT 60.037 55.000 0.00 0.00 34.09 3.41
1553 4344 1.071605 GTACGCCAAGCTTCTGTCTG 58.928 55.000 0.00 0.00 0.00 3.51
1554 4345 0.679505 TACGCCAAGCTTCTGTCTGT 59.320 50.000 0.00 0.00 0.00 3.41
1555 4346 0.882042 ACGCCAAGCTTCTGTCTGTG 60.882 55.000 0.00 0.00 0.00 3.66
1557 4348 0.871057 GCCAAGCTTCTGTCTGTGTC 59.129 55.000 0.00 0.00 0.00 3.67
1558 4349 1.542108 GCCAAGCTTCTGTCTGTGTCT 60.542 52.381 0.00 0.00 0.00 3.41
1559 4350 2.411904 CCAAGCTTCTGTCTGTGTCTC 58.588 52.381 0.00 0.00 0.00 3.36
1561 4352 2.008242 AGCTTCTGTCTGTGTCTCCT 57.992 50.000 0.00 0.00 0.00 3.69
1574 4368 8.414003 TGTCTGTGTCTCCTTATCATATTACAC 58.586 37.037 0.00 0.00 37.18 2.90
1627 4421 5.600898 TGACCAGGACGGAGAATGATAAATA 59.399 40.000 0.00 0.00 38.63 1.40
1711 4966 3.243704 TGCCACCAGTTTAATGTTCTTGC 60.244 43.478 0.00 0.00 0.00 4.01
1728 4985 0.801872 TGCCAATGTCGCACACATAC 59.198 50.000 0.00 0.00 45.77 2.39
1751 5020 5.925397 ACGCTGATCTGAGATATCAACATTC 59.075 40.000 10.21 5.97 33.13 2.67
1914 5187 7.880195 CCTACAAATAGGCTCTGCAGTAATTAT 59.120 37.037 14.67 5.77 41.80 1.28
2040 5320 2.724690 CTGAGACGGTGTGTTTCTAACG 59.275 50.000 0.00 0.00 33.01 3.18
2049 5329 1.130561 GTGTTTCTAACGCCCTCATGC 59.869 52.381 0.00 0.00 35.92 4.06
2066 5346 7.281100 GCCCTCATGCCTACTCATATTTTATAC 59.719 40.741 0.00 0.00 0.00 1.47
2206 5487 2.298729 GGTTTGGTTGCTGCCATTTCTA 59.701 45.455 0.00 0.00 38.48 2.10
2207 5488 3.055891 GGTTTGGTTGCTGCCATTTCTAT 60.056 43.478 0.00 0.00 38.48 1.98
2209 5490 5.337169 GGTTTGGTTGCTGCCATTTCTATTA 60.337 40.000 0.00 0.00 38.48 0.98
2211 5492 4.854173 TGGTTGCTGCCATTTCTATTAGA 58.146 39.130 0.00 0.00 32.81 2.10
2212 5493 5.448654 TGGTTGCTGCCATTTCTATTAGAT 58.551 37.500 0.00 0.00 32.81 1.98
2214 5495 5.767168 GGTTGCTGCCATTTCTATTAGATCT 59.233 40.000 0.00 0.00 0.00 2.75
2219 5500 8.192774 TGCTGCCATTTCTATTAGATCTTTTTG 58.807 33.333 0.00 0.00 0.00 2.44
2220 5501 8.193438 GCTGCCATTTCTATTAGATCTTTTTGT 58.807 33.333 0.00 0.00 0.00 2.83
2264 5545 5.981315 TCCTAGTGTGTTCTAACAAGTTTCG 59.019 40.000 0.00 0.00 41.21 3.46
2282 5563 9.573133 CAAGTTTCGATTTTTCTATATGGCTTT 57.427 29.630 0.00 0.00 0.00 3.51
2465 5746 6.212955 CCTTGGTAAGGTTGTTTGTGTATTG 58.787 40.000 0.00 0.00 43.95 1.90
2470 5751 7.450014 TGGTAAGGTTGTTTGTGTATTGATCAT 59.550 33.333 0.00 0.00 0.00 2.45
2477 5758 8.853345 GTTGTTTGTGTATTGATCATGTCATTC 58.147 33.333 0.00 0.00 36.54 2.67
2486 5767 9.264719 GTATTGATCATGTCATTCTGTATCACA 57.735 33.333 0.00 0.00 36.54 3.58
2490 5771 3.266510 TGTCATTCTGTATCACAGGGC 57.733 47.619 6.48 0.00 45.94 5.19
2514 5795 9.771534 GGCATTAATTTTGGCCTTTATATGTTA 57.228 29.630 3.32 0.00 43.09 2.41
2520 5801 9.432982 AATTTTGGCCTTTATATGTTAGATCCA 57.567 29.630 3.32 0.00 0.00 3.41
2521 5802 9.605951 ATTTTGGCCTTTATATGTTAGATCCAT 57.394 29.630 3.32 0.00 0.00 3.41
2522 5803 8.408043 TTTGGCCTTTATATGTTAGATCCATG 57.592 34.615 3.32 0.00 0.00 3.66
2533 5918 9.685276 ATATGTTAGATCCATGAACTGTTGAAA 57.315 29.630 0.00 0.00 0.00 2.69
2580 5971 4.913084 TGAATTGAAGGCTTCACTTCGGC 61.913 47.826 35.03 23.16 46.35 5.54
2629 6020 8.537728 AGATAGATAAATGCAACAAAATCCCA 57.462 30.769 0.00 0.00 0.00 4.37
2643 6096 9.546428 CAACAAAATCCCAAAGTTTCTATTTCT 57.454 29.630 0.00 0.00 0.00 2.52
2689 6142 1.030457 ATACCGTAGTCCCTTCTGCG 58.970 55.000 0.00 0.00 41.67 5.18
2723 6177 2.091541 CACCGTATTGCCTGAATGGTT 58.908 47.619 0.00 0.00 38.35 3.67
2756 6213 9.923143 TGTTTCTATCTCGTCTTTTTATCTGAA 57.077 29.630 0.00 0.00 0.00 3.02
2763 6220 9.930693 ATCTCGTCTTTTTATCTGAAAGTAGTT 57.069 29.630 0.00 0.00 35.95 2.24
2764 6221 9.193133 TCTCGTCTTTTTATCTGAAAGTAGTTG 57.807 33.333 0.00 0.00 35.95 3.16
2802 6777 8.091449 AGACTTGCAGCACTAAATATATACTCC 58.909 37.037 0.00 0.00 0.00 3.85
2803 6778 7.162082 ACTTGCAGCACTAAATATATACTCCC 58.838 38.462 0.00 0.00 0.00 4.30
2804 6779 6.935240 TGCAGCACTAAATATATACTCCCT 57.065 37.500 0.00 0.00 0.00 4.20
2805 6780 6.936279 TGCAGCACTAAATATATACTCCCTC 58.064 40.000 0.00 0.00 0.00 4.30
2806 6781 6.070767 TGCAGCACTAAATATATACTCCCTCC 60.071 42.308 0.00 0.00 0.00 4.30
2807 6782 6.565234 CAGCACTAAATATATACTCCCTCCG 58.435 44.000 0.00 0.00 0.00 4.63
2808 6783 6.153000 CAGCACTAAATATATACTCCCTCCGT 59.847 42.308 0.00 0.00 0.00 4.69
2809 6784 6.377712 AGCACTAAATATATACTCCCTCCGTC 59.622 42.308 0.00 0.00 0.00 4.79
2810 6785 6.405619 GCACTAAATATATACTCCCTCCGTCC 60.406 46.154 0.00 0.00 0.00 4.79
2811 6786 6.096564 CACTAAATATATACTCCCTCCGTCCC 59.903 46.154 0.00 0.00 0.00 4.46
2812 6787 4.687262 AATATATACTCCCTCCGTCCCA 57.313 45.455 0.00 0.00 0.00 4.37
2813 6788 4.687262 ATATATACTCCCTCCGTCCCAA 57.313 45.455 0.00 0.00 0.00 4.12
2814 6789 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
2815 6790 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
2816 6791 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2817 6792 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2818 6793 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2819 6794 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2820 6795 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2821 6796 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2822 6797 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2823 6798 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2824 6799 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2825 6800 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2826 6801 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2827 6802 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2828 6803 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2829 6804 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2830 6805 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2831 6806 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2832 6807 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
2833 6808 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
2834 6809 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2835 6810 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
2843 6818 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
2844 6819 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
2846 6821 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
2847 6822 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
2854 6829 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
2855 6830 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
2856 6831 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
2857 6832 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
2858 6833 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
2859 6834 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
2860 6835 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
2861 6836 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
2862 6837 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
2863 6838 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
2864 6839 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
2865 6840 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
2866 6841 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
2867 6842 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
2868 6843 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
2871 6846 9.577110 TGTATCAAGTCACGTTTTAGTATTAGG 57.423 33.333 0.00 0.00 0.00 2.69
2872 6847 9.578439 GTATCAAGTCACGTTTTAGTATTAGGT 57.422 33.333 0.00 0.00 0.00 3.08
2874 6849 8.970691 TCAAGTCACGTTTTAGTATTAGGTAC 57.029 34.615 0.00 0.00 0.00 3.34
2875 6850 8.575589 TCAAGTCACGTTTTAGTATTAGGTACA 58.424 33.333 0.00 0.00 35.67 2.90
2876 6851 9.362539 CAAGTCACGTTTTAGTATTAGGTACAT 57.637 33.333 0.00 0.00 35.67 2.29
2877 6852 9.578439 AAGTCACGTTTTAGTATTAGGTACATC 57.422 33.333 0.00 0.00 35.67 3.06
2878 6853 8.193438 AGTCACGTTTTAGTATTAGGTACATCC 58.807 37.037 0.00 0.00 35.67 3.51
2879 6854 7.166473 GTCACGTTTTAGTATTAGGTACATCCG 59.834 40.741 0.00 0.00 41.99 4.18
2880 6855 6.974622 CACGTTTTAGTATTAGGTACATCCGT 59.025 38.462 0.00 0.00 41.99 4.69
2881 6856 8.128582 CACGTTTTAGTATTAGGTACATCCGTA 58.871 37.037 0.00 0.00 41.99 4.02
2882 6857 8.850156 ACGTTTTAGTATTAGGTACATCCGTAT 58.150 33.333 0.00 0.00 41.99 3.06
2883 6858 9.334693 CGTTTTAGTATTAGGTACATCCGTATC 57.665 37.037 0.00 0.00 41.99 2.24
2889 6864 8.600668 AGTATTAGGTACATCCGTATCTAGACA 58.399 37.037 0.00 0.00 41.33 3.41
2890 6865 9.224267 GTATTAGGTACATCCGTATCTAGACAA 57.776 37.037 0.00 0.00 41.33 3.18
2891 6866 8.701908 ATTAGGTACATCCGTATCTAGACAAA 57.298 34.615 0.00 0.00 41.33 2.83
2892 6867 8.701908 TTAGGTACATCCGTATCTAGACAAAT 57.298 34.615 0.00 0.00 41.33 2.32
2893 6868 7.216973 AGGTACATCCGTATCTAGACAAATC 57.783 40.000 0.00 0.00 37.29 2.17
2894 6869 7.005296 AGGTACATCCGTATCTAGACAAATCT 58.995 38.462 0.00 0.00 37.29 2.40
2895 6870 8.162085 AGGTACATCCGTATCTAGACAAATCTA 58.838 37.037 0.00 0.00 37.29 1.98
2896 6871 8.790718 GGTACATCCGTATCTAGACAAATCTAA 58.209 37.037 0.00 0.00 36.98 2.10
2897 6872 9.828852 GTACATCCGTATCTAGACAAATCTAAG 57.171 37.037 0.00 0.00 36.98 2.18
2898 6873 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
2899 6874 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
2900 6875 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
2901 6876 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
2902 6877 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
2903 6878 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
2911 6886 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
2912 6887 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2913 6888 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
2914 6889 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2915 6890 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2916 6891 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2917 6892 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2918 6893 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2919 6894 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2920 6895 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2953 6928 2.794910 CACACCAGTCACTGTTTAGTCG 59.205 50.000 3.56 0.00 34.07 4.18
2959 6934 3.731216 CAGTCACTGTTTAGTCGTGTCTG 59.269 47.826 0.00 0.00 38.03 3.51
2974 6949 3.436704 CGTGTCTGGTATTTGCAGTTCAT 59.563 43.478 0.00 0.00 0.00 2.57
2975 6950 4.436050 CGTGTCTGGTATTTGCAGTTCATC 60.436 45.833 0.00 0.00 0.00 2.92
2981 6956 4.277174 TGGTATTTGCAGTTCATCGTTTGT 59.723 37.500 0.00 0.00 0.00 2.83
2982 6957 4.616802 GGTATTTGCAGTTCATCGTTTGTG 59.383 41.667 0.00 0.00 0.00 3.33
2986 6961 2.226200 TGCAGTTCATCGTTTGTGGATG 59.774 45.455 0.00 0.00 42.05 3.51
2987 6962 2.226437 GCAGTTCATCGTTTGTGGATGT 59.774 45.455 2.15 0.00 41.54 3.06
3016 6991 7.672983 TTGTTCTGAGGATAATTCACTGTTC 57.327 36.000 0.00 0.00 0.00 3.18
3122 7098 2.600173 CCAACGGGTGCCCAACAT 60.600 61.111 8.14 0.00 35.37 2.71
3158 7134 8.529911 GTTCAAGTTATATTGCTGACTACGTAC 58.470 37.037 0.00 0.00 0.00 3.67
3172 7151 9.132521 GCTGACTACGTACTTTATTAGTTTGAA 57.867 33.333 0.00 0.00 38.33 2.69
3219 7198 0.321346 TTGCAGCTGTTGGATCTCGA 59.679 50.000 16.64 0.00 0.00 4.04
3295 7274 8.644318 AGACAAATATATTGACGAGGTACAAC 57.356 34.615 0.00 0.00 0.00 3.32
3448 7430 1.524008 GCTTGCCCCAGGTGTGTTAC 61.524 60.000 0.00 0.00 0.00 2.50
3488 7477 8.063153 TGGTTGTCCTACCTATAACTCAATCTA 58.937 37.037 0.00 0.00 39.04 1.98
3489 7478 8.578151 GGTTGTCCTACCTATAACTCAATCTAG 58.422 40.741 0.00 0.00 35.23 2.43
3498 7487 9.440761 ACCTATAACTCAATCTAGGTTCATTCT 57.559 33.333 0.00 0.00 40.82 2.40
3527 7516 9.683069 TGATTCTTTGCTAAATTCTCTTTTGTC 57.317 29.630 0.00 0.00 0.00 3.18
3540 7529 6.274157 TCTCTTTTGTCTCTACACCTGATC 57.726 41.667 0.00 0.00 34.61 2.92
3547 7536 2.025226 TCTCTACACCTGATCGGGAAGT 60.025 50.000 27.90 23.95 36.97 3.01
3566 7555 7.859377 CGGGAAGTTGAGATGATGAAATTATTG 59.141 37.037 0.00 0.00 0.00 1.90
3592 7581 2.005451 CAGCCTCATCTCCAAAGAACG 58.995 52.381 0.00 0.00 34.49 3.95
3596 7585 2.675348 CCTCATCTCCAAAGAACGAAGC 59.325 50.000 0.00 0.00 34.49 3.86
3659 7648 3.652869 ACAAAGGAGGGATGAACTGAAGA 59.347 43.478 0.00 0.00 0.00 2.87
3685 7674 7.902920 ATTAGTTGCATCCATGATAAAACCT 57.097 32.000 0.00 0.00 0.00 3.50
3715 7704 4.157840 GTGCAGGGTAGAACTTTAAATGGG 59.842 45.833 0.00 0.00 0.00 4.00
3724 7713 7.120873 GGTAGAACTTTAAATGGGAAGGAGTTC 59.879 40.741 0.00 0.00 40.89 3.01
3747 7736 4.100498 CGTATCCTTCTTAGGGCAGGTAAA 59.900 45.833 0.00 0.00 42.26 2.01
3755 7744 0.321653 AGGGCAGGTAAAGCTCGTTG 60.322 55.000 0.00 0.00 37.61 4.10
3762 7751 2.104281 AGGTAAAGCTCGTTGGTGTTCT 59.896 45.455 0.00 0.00 0.00 3.01
3767 7756 3.420839 AGCTCGTTGGTGTTCTTTTTG 57.579 42.857 0.00 0.00 0.00 2.44
3771 7760 4.497966 GCTCGTTGGTGTTCTTTTTGTTAC 59.502 41.667 0.00 0.00 0.00 2.50
3886 7875 2.533318 GACAGGGTCGCTTGTTGAG 58.467 57.895 0.00 0.00 0.00 3.02
3904 7893 5.306678 TGTTGAGGTTTTCAATAAGGGCATT 59.693 36.000 0.00 0.00 46.85 3.56
3951 7940 9.614792 GTATACTGAAAGAATGGAAATAGTGGT 57.385 33.333 0.00 0.00 37.43 4.16
3952 7941 8.738645 ATACTGAAAGAATGGAAATAGTGGTC 57.261 34.615 0.00 0.00 37.43 4.02
3955 7944 6.552008 TGAAAGAATGGAAATAGTGGTCCTT 58.448 36.000 0.00 0.00 34.77 3.36
4111 8100 3.066760 AGGTTCTGTTTGCAGCACTTAAC 59.933 43.478 0.00 0.00 42.29 2.01
4143 8132 7.657336 CACTTCAAATTATATACGCCCCATTT 58.343 34.615 0.00 0.00 0.00 2.32
4272 8265 4.260985 TGTGTGAAGCAAAGTTCTCAGAA 58.739 39.130 0.00 0.00 32.17 3.02
4419 8412 3.002791 TGAGCATCGAATGTCAAAGGTC 58.997 45.455 0.00 0.00 38.61 3.85
4448 8441 2.695359 TCAACGCAAGATACCTTCCAC 58.305 47.619 0.00 0.00 43.62 4.02
4471 8465 4.142447 CGAGGAGAGAAATCGTCCACTAAA 60.142 45.833 7.38 0.00 31.83 1.85
4472 8466 5.074584 AGGAGAGAAATCGTCCACTAAAC 57.925 43.478 7.38 0.00 32.23 2.01
4473 8467 4.773149 AGGAGAGAAATCGTCCACTAAACT 59.227 41.667 7.38 0.00 32.23 2.66
4474 8468 4.865365 GGAGAGAAATCGTCCACTAAACTG 59.135 45.833 1.30 0.00 0.00 3.16
4475 8469 4.246458 AGAGAAATCGTCCACTAAACTGC 58.754 43.478 0.00 0.00 0.00 4.40
4478 8472 4.819630 AGAAATCGTCCACTAAACTGCAAA 59.180 37.500 0.00 0.00 0.00 3.68
4479 8473 5.473504 AGAAATCGTCCACTAAACTGCAAAT 59.526 36.000 0.00 0.00 0.00 2.32
4662 8657 9.113838 ACATTCATTGAAGTAGGTAATGATGTC 57.886 33.333 5.21 0.00 39.67 3.06
4732 8727 6.481644 GGAAAAGGCTAATCATCTAGACACTG 59.518 42.308 0.00 0.00 28.20 3.66
4775 8772 3.375782 ACACTTTTTGGAAGATGCTGC 57.624 42.857 0.00 0.00 0.00 5.25
4851 8848 7.815068 CCGGTAATCAAAGACTAATCATCTAGG 59.185 40.741 0.00 0.00 0.00 3.02
4906 8904 4.229876 GTTCTGTGAAATGCCAAAGTAGC 58.770 43.478 0.00 0.00 0.00 3.58
4979 8977 6.880484 TGAACATTTCTTACCGAAGCCTATA 58.120 36.000 0.00 0.00 32.21 1.31
4980 8978 7.506114 TGAACATTTCTTACCGAAGCCTATAT 58.494 34.615 0.00 0.00 32.21 0.86
4981 8979 8.644216 TGAACATTTCTTACCGAAGCCTATATA 58.356 33.333 0.00 0.00 32.21 0.86
4982 8980 8.828688 AACATTTCTTACCGAAGCCTATATAC 57.171 34.615 0.00 0.00 32.21 1.47
5117 9120 0.109342 ACTCTTCAACTGGCTGGTGG 59.891 55.000 9.67 0.00 33.29 4.61
5365 9369 3.489059 GGTGACAAAGTCCACAACACATG 60.489 47.826 0.00 0.00 0.00 3.21
5414 9439 9.101655 TGATATATCACTCTCACAACATTGTTG 57.898 33.333 24.40 24.40 39.91 3.33
5419 9444 5.414144 TCACTCTCACAACATTGTTGTTTGA 59.586 36.000 28.06 24.66 43.57 2.69
5433 9459 0.379669 GTTTGATGAGCAGATGGGCG 59.620 55.000 0.00 0.00 39.27 6.13
5457 9483 2.587956 CCAATTGTTGTCATGCTGTCG 58.412 47.619 4.43 0.00 0.00 4.35
5477 9503 4.153475 GTCGTTCTTAGCTGTTTATTGGCA 59.847 41.667 0.00 0.00 0.00 4.92
5478 9504 4.153475 TCGTTCTTAGCTGTTTATTGGCAC 59.847 41.667 0.00 0.00 0.00 5.01
5508 9534 1.455217 GAGGGGAAGGATCGGTCGA 60.455 63.158 0.00 0.00 0.00 4.20
5605 9631 9.682465 CACATTTGAGAGATATGGATATGGATT 57.318 33.333 0.00 0.00 0.00 3.01
5635 9667 0.315251 TGCGACTTCAGACAGAGTGG 59.685 55.000 0.00 0.00 0.00 4.00
5748 9780 1.780309 TGACCCTGTGAATTCCTTGGT 59.220 47.619 2.27 4.46 0.00 3.67
5752 9784 3.206150 CCCTGTGAATTCCTTGGTATCG 58.794 50.000 2.27 0.00 0.00 2.92
5824 9856 3.976593 CTCATGGGCTGGGAGCTA 58.023 61.111 0.00 0.00 41.99 3.32
5857 9889 7.148340 GGACATCTGAGAGATAAAAACTGGTTG 60.148 40.741 0.00 0.00 32.12 3.77
5972 10010 6.647212 TGTATATGTGCTTGAAAGTCGAAG 57.353 37.500 0.00 0.00 0.00 3.79
6014 10052 3.890756 TGAAATGTCTGCCTTCACATGTT 59.109 39.130 0.00 0.00 33.38 2.71
6034 10072 6.539649 TGTTCAAATTCTAACAAGGTCTCG 57.460 37.500 3.71 0.00 32.86 4.04
6036 10074 4.000988 TCAAATTCTAACAAGGTCTCGCC 58.999 43.478 0.00 0.00 37.58 5.54
6043 10081 1.961277 CAAGGTCTCGCCGTTGCTT 60.961 57.895 0.00 0.00 43.70 3.91
6044 10082 1.668151 AAGGTCTCGCCGTTGCTTC 60.668 57.895 0.00 0.00 43.70 3.86
6045 10083 3.119096 GGTCTCGCCGTTGCTTCC 61.119 66.667 0.00 0.00 34.43 3.46
6046 10084 2.048127 GTCTCGCCGTTGCTTCCT 60.048 61.111 0.00 0.00 34.43 3.36
6047 10085 2.095252 GTCTCGCCGTTGCTTCCTC 61.095 63.158 0.00 0.00 34.43 3.71
6048 10086 2.262915 CTCGCCGTTGCTTCCTCT 59.737 61.111 0.00 0.00 34.43 3.69
6049 10087 2.048222 TCGCCGTTGCTTCCTCTG 60.048 61.111 0.00 0.00 34.43 3.35
6050 10088 2.357517 CGCCGTTGCTTCCTCTGT 60.358 61.111 0.00 0.00 34.43 3.41
6051 10089 1.080093 CGCCGTTGCTTCCTCTGTA 60.080 57.895 0.00 0.00 34.43 2.74
6052 10090 0.669318 CGCCGTTGCTTCCTCTGTAA 60.669 55.000 0.00 0.00 34.43 2.41
6053 10091 1.519408 GCCGTTGCTTCCTCTGTAAA 58.481 50.000 0.00 0.00 33.53 2.01
6054 10092 1.464997 GCCGTTGCTTCCTCTGTAAAG 59.535 52.381 0.00 0.00 33.53 1.85
6055 10093 2.870435 GCCGTTGCTTCCTCTGTAAAGA 60.870 50.000 0.00 0.00 33.53 2.52
6056 10094 3.399330 CCGTTGCTTCCTCTGTAAAGAA 58.601 45.455 0.00 0.00 0.00 2.52
6057 10095 3.813166 CCGTTGCTTCCTCTGTAAAGAAA 59.187 43.478 0.00 0.00 0.00 2.52
6058 10096 4.455877 CCGTTGCTTCCTCTGTAAAGAAAT 59.544 41.667 0.00 0.00 0.00 2.17
6059 10097 5.642063 CCGTTGCTTCCTCTGTAAAGAAATA 59.358 40.000 0.00 0.00 0.00 1.40
6060 10098 6.402226 CCGTTGCTTCCTCTGTAAAGAAATAC 60.402 42.308 0.00 0.00 0.00 1.89
6061 10099 6.147164 CGTTGCTTCCTCTGTAAAGAAATACA 59.853 38.462 0.00 0.00 34.72 2.29
6062 10100 7.307751 CGTTGCTTCCTCTGTAAAGAAATACAA 60.308 37.037 0.00 0.00 35.48 2.41
6063 10101 8.349983 GTTGCTTCCTCTGTAAAGAAATACAAA 58.650 33.333 0.00 0.00 35.48 2.83
6064 10102 8.458573 TGCTTCCTCTGTAAAGAAATACAAAA 57.541 30.769 0.00 0.00 35.48 2.44
6065 10103 8.567948 TGCTTCCTCTGTAAAGAAATACAAAAG 58.432 33.333 0.00 0.00 35.48 2.27
6066 10104 7.539022 GCTTCCTCTGTAAAGAAATACAAAAGC 59.461 37.037 0.00 0.00 35.48 3.51
6067 10105 7.129109 TCCTCTGTAAAGAAATACAAAAGCG 57.871 36.000 0.00 0.00 35.48 4.68
6068 10106 6.708949 TCCTCTGTAAAGAAATACAAAAGCGT 59.291 34.615 0.00 0.00 35.48 5.07
6069 10107 7.227910 TCCTCTGTAAAGAAATACAAAAGCGTT 59.772 33.333 0.00 0.00 35.48 4.84
6070 10108 7.860872 CCTCTGTAAAGAAATACAAAAGCGTTT 59.139 33.333 0.00 0.00 35.48 3.60
6071 10109 9.872757 CTCTGTAAAGAAATACAAAAGCGTTTA 57.127 29.630 0.00 0.00 35.48 2.01
6072 10110 9.872757 TCTGTAAAGAAATACAAAAGCGTTTAG 57.127 29.630 0.00 0.00 35.48 1.85
6073 10111 9.872757 CTGTAAAGAAATACAAAAGCGTTTAGA 57.127 29.630 0.00 0.00 35.48 2.10
6077 10115 8.950403 AAGAAATACAAAAGCGTTTAGATCAC 57.050 30.769 0.00 0.00 0.00 3.06
6078 10116 8.324163 AGAAATACAAAAGCGTTTAGATCACT 57.676 30.769 0.00 0.00 0.00 3.41
6079 10117 9.431887 AGAAATACAAAAGCGTTTAGATCACTA 57.568 29.630 0.00 0.00 0.00 2.74
6085 10123 9.216117 ACAAAAGCGTTTAGATCACTATAAAGT 57.784 29.630 0.00 0.00 35.91 2.66
6089 10127 9.517609 AAGCGTTTAGATCACTATAAAGTAGTG 57.482 33.333 8.53 8.53 44.56 2.74
6099 10137 7.194278 TCACTATAAAGTAGTGATCTGAACGC 58.806 38.462 12.49 0.00 46.16 4.84
6100 10138 7.067129 TCACTATAAAGTAGTGATCTGAACGCT 59.933 37.037 12.49 6.26 46.16 5.07
6101 10139 7.377397 CACTATAAAGTAGTGATCTGAACGCTC 59.623 40.741 9.07 0.00 45.69 5.03
6146 10184 2.100584 CTCGCCTGCTCACTTTATCTCT 59.899 50.000 0.00 0.00 0.00 3.10
6149 10187 2.935201 GCCTGCTCACTTTATCTCTGTG 59.065 50.000 0.00 0.00 0.00 3.66
6190 10228 2.019249 CCAGCACATGGTTGTATGGAG 58.981 52.381 0.00 0.00 44.91 3.86
6197 10236 1.227383 GGTTGTATGGAGGCCTGGG 59.773 63.158 12.00 0.00 0.00 4.45
6213 10252 0.179468 TGGGACAGTAATTAGGCGCC 59.821 55.000 21.89 21.89 0.00 6.53
6237 10276 2.976494 AAGAACCGTGTTGGCCCCAG 62.976 60.000 0.00 0.00 43.94 4.45
6337 10376 2.864343 GTTATCACGTGCCATCCAGTAC 59.136 50.000 11.67 0.00 0.00 2.73
6388 10428 0.039074 AACTGAAGCCTGTCGAGTCG 60.039 55.000 6.09 6.09 0.00 4.18
6404 10444 0.531974 GTCGTGCACCAAGGAGTTGA 60.532 55.000 12.15 0.00 35.46 3.18
6412 10452 2.947652 CACCAAGGAGTTGATGCTATGG 59.052 50.000 0.00 0.00 35.46 2.74
6415 10455 3.629398 CCAAGGAGTTGATGCTATGGTTC 59.371 47.826 0.00 0.00 35.46 3.62
6425 10465 7.941238 AGTTGATGCTATGGTTCTGCTTATTAT 59.059 33.333 0.00 0.00 0.00 1.28
6442 10511 6.649557 GCTTATTATTACTCCTTGCCGTACAT 59.350 38.462 0.00 0.00 0.00 2.29
6549 10618 7.390718 ACACAACCTTACTCCAAATAGCTAAAG 59.609 37.037 0.00 0.00 0.00 1.85
6552 10621 6.663734 ACCTTACTCCAAATAGCTAAAGCAT 58.336 36.000 4.54 0.00 45.16 3.79
6558 10627 4.650588 TCCAAATAGCTAAAGCATGCCAAT 59.349 37.500 15.66 3.14 45.16 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 2.359975 CTGTTTCGTGGCTCCCCC 60.360 66.667 0.00 0.00 0.00 5.40
94 95 1.671379 GTCTGTTTCGTGGCTCCCC 60.671 63.158 0.00 0.00 0.00 4.81
120 121 5.617751 CGACAATCTCAACCAGTTTTCATCC 60.618 44.000 0.00 0.00 0.00 3.51
160 161 9.394767 AGATTCACTTATACATGCAACACAATA 57.605 29.630 0.00 0.00 0.00 1.90
162 163 7.390162 TGAGATTCACTTATACATGCAACACAA 59.610 33.333 0.00 0.00 0.00 3.33
163 164 6.878389 TGAGATTCACTTATACATGCAACACA 59.122 34.615 0.00 0.00 0.00 3.72
164 165 7.307493 TGAGATTCACTTATACATGCAACAC 57.693 36.000 0.00 0.00 0.00 3.32
165 166 7.769970 TGATGAGATTCACTTATACATGCAACA 59.230 33.333 0.00 0.00 0.00 3.33
166 167 8.066595 GTGATGAGATTCACTTATACATGCAAC 58.933 37.037 0.00 0.00 42.22 4.17
170 171 8.667076 TTGGTGATGAGATTCACTTATACATG 57.333 34.615 4.75 0.00 44.39 3.21
215 216 0.393077 GAGTACACAGCCACACAGGT 59.607 55.000 0.00 0.00 40.61 4.00
241 242 4.789012 TGAAATCTGGAACTGCATTTCC 57.211 40.909 24.92 24.92 44.86 3.13
283 284 3.119849 GCGAGACCTTGTTATTTGCACAT 60.120 43.478 0.00 0.00 0.00 3.21
328 329 1.967319 TTCAGAGAACCAAGGTGTGC 58.033 50.000 0.00 0.00 0.00 4.57
391 393 6.329460 GGGAGTATTTCCTTCCCTGTACTATT 59.671 42.308 1.55 0.00 45.84 1.73
470 570 2.683152 GCTGACTGATTCCCAGAGCAAT 60.683 50.000 0.00 0.00 45.78 3.56
479 579 5.776744 ACAATTTTCAAGCTGACTGATTCC 58.223 37.500 0.00 0.00 0.00 3.01
499 600 7.507956 TCCCTCCGTCTCATAATATAAGAACAA 59.492 37.037 0.00 0.00 0.00 2.83
508 609 6.390048 AGATACTCCCTCCGTCTCATAATA 57.610 41.667 0.00 0.00 0.00 0.98
523 2127 5.564048 ACGACAACTCTGTTAGATACTCC 57.436 43.478 0.00 0.00 35.30 3.85
534 2138 5.008217 TCCATTTTGGTTTACGACAACTCTG 59.992 40.000 0.00 0.00 39.03 3.35
548 2152 1.816224 GCGGTATGTGTCCATTTTGGT 59.184 47.619 0.00 0.00 39.03 3.67
553 2157 0.618458 ACTGGCGGTATGTGTCCATT 59.382 50.000 0.00 0.00 32.29 3.16
618 2222 8.450964 TGTAAGAATTTTGCTGCTACAGAATAC 58.549 33.333 0.00 0.00 32.44 1.89
619 2223 8.560355 TGTAAGAATTTTGCTGCTACAGAATA 57.440 30.769 0.00 0.00 32.44 1.75
620 2224 7.452880 TGTAAGAATTTTGCTGCTACAGAAT 57.547 32.000 0.00 0.00 32.44 2.40
621 2225 6.875948 TGTAAGAATTTTGCTGCTACAGAA 57.124 33.333 0.00 0.00 32.44 3.02
622 2226 6.875948 TTGTAAGAATTTTGCTGCTACAGA 57.124 33.333 0.00 0.00 32.44 3.41
625 2229 8.748380 AAGATTTGTAAGAATTTTGCTGCTAC 57.252 30.769 0.00 0.00 0.00 3.58
627 2231 6.870439 GGAAGATTTGTAAGAATTTTGCTGCT 59.130 34.615 0.00 0.00 0.00 4.24
628 2232 6.183360 CGGAAGATTTGTAAGAATTTTGCTGC 60.183 38.462 0.00 0.00 0.00 5.25
629 2233 6.308766 CCGGAAGATTTGTAAGAATTTTGCTG 59.691 38.462 0.00 0.00 0.00 4.41
646 2552 3.178611 GGGCATCCCCCGGAAGAT 61.179 66.667 0.73 0.70 45.91 2.40
655 2561 4.052518 ACACTGGCTGGGCATCCC 62.053 66.667 0.00 0.00 45.71 3.85
656 2562 2.753043 CACACTGGCTGGGCATCC 60.753 66.667 0.00 0.00 0.00 3.51
657 2563 2.753043 CCACACTGGCTGGGCATC 60.753 66.667 0.00 0.00 0.00 3.91
696 2822 4.803908 CCAGGCGGGAGGGAAAGC 62.804 72.222 0.00 0.00 40.01 3.51
723 2855 2.029073 CGGTTGTCACCTGCTCGT 59.971 61.111 0.00 0.00 41.64 4.18
731 2863 1.527380 TTTCCCCTGCGGTTGTCAC 60.527 57.895 0.00 0.00 0.00 3.67
732 2864 1.527380 GTTTCCCCTGCGGTTGTCA 60.527 57.895 0.00 0.00 0.00 3.58
733 2865 2.265904 GGTTTCCCCTGCGGTTGTC 61.266 63.158 0.00 0.00 0.00 3.18
801 2934 2.835895 GGAGAGGGGCGAGGAGTC 60.836 72.222 0.00 0.00 0.00 3.36
803 2936 2.520741 GAGGAGAGGGGCGAGGAG 60.521 72.222 0.00 0.00 0.00 3.69
804 2937 4.144727 GGAGGAGAGGGGCGAGGA 62.145 72.222 0.00 0.00 0.00 3.71
805 2938 3.765257 ATGGAGGAGAGGGGCGAGG 62.765 68.421 0.00 0.00 0.00 4.63
874 3017 2.202892 CTTACGGCGGCTTCTCCC 60.203 66.667 13.24 0.00 0.00 4.30
875 3018 2.890961 GCTTACGGCGGCTTCTCC 60.891 66.667 13.24 0.00 0.00 3.71
876 3019 2.890961 GGCTTACGGCGGCTTCTC 60.891 66.667 13.24 0.00 42.94 2.87
877 3020 3.665675 CTGGCTTACGGCGGCTTCT 62.666 63.158 13.24 0.00 42.94 2.85
878 3021 3.195698 CTGGCTTACGGCGGCTTC 61.196 66.667 13.24 0.00 42.94 3.86
889 3032 2.196319 GCAAATAGCTGGCTGGCTT 58.804 52.632 10.35 0.00 42.97 4.35
923 3066 3.812865 AACACGAACCCGAACCCCG 62.813 63.158 0.00 0.00 39.50 5.73
924 3067 1.962822 GAACACGAACCCGAACCCC 60.963 63.158 0.00 0.00 39.50 4.95
925 3068 2.312436 CGAACACGAACCCGAACCC 61.312 63.158 0.00 0.00 39.50 4.11
926 3069 1.153597 AACGAACACGAACCCGAACC 61.154 55.000 0.00 0.00 39.50 3.62
927 3070 0.230515 GAACGAACACGAACCCGAAC 59.769 55.000 0.00 0.00 39.50 3.95
928 3071 1.208009 CGAACGAACACGAACCCGAA 61.208 55.000 0.00 0.00 39.50 4.30
929 3072 1.658102 CGAACGAACACGAACCCGA 60.658 57.895 0.00 0.00 39.50 5.14
930 3073 1.945662 ACGAACGAACACGAACCCG 60.946 57.895 0.14 0.00 42.50 5.28
966 3109 2.281484 GTTCACCTTCTGGCCGCA 60.281 61.111 0.00 0.00 36.63 5.69
1113 3274 8.440833 CGTCTCTTTTCGGAAATTTTGTACTAT 58.559 33.333 3.67 0.00 0.00 2.12
1128 3292 3.818387 TGTACAGTAGCGTCTCTTTTCG 58.182 45.455 0.00 0.00 0.00 3.46
1137 3301 3.257375 TGATCCTTGTTGTACAGTAGCGT 59.743 43.478 0.00 0.00 0.00 5.07
1184 3947 9.348476 TGCATGTATAACTAGCATGGATAAAAA 57.652 29.630 8.71 0.00 40.03 1.94
1192 3955 6.293626 GGAAACCTGCATGTATAACTAGCATG 60.294 42.308 0.00 3.64 41.89 4.06
1204 3967 0.036388 ACGATCGGAAACCTGCATGT 60.036 50.000 20.98 0.00 0.00 3.21
1323 4086 8.492673 TCAGATTAGCAATTTGGTACTGTAAG 57.507 34.615 18.22 6.14 42.29 2.34
1324 4087 8.856153 TTCAGATTAGCAATTTGGTACTGTAA 57.144 30.769 18.22 12.15 30.94 2.41
1366 4129 6.701841 GGGAAAGTGAAAAAGAAATCAACTCC 59.298 38.462 0.00 0.00 0.00 3.85
1385 4159 4.390603 TCGTCGTGTCATTAATTGGGAAAG 59.609 41.667 0.00 0.00 0.00 2.62
1527 4317 1.607148 GAAGCTTGGCGTACCTTTGTT 59.393 47.619 2.10 0.00 36.63 2.83
1550 4341 7.501225 TCGTGTAATATGATAAGGAGACACAGA 59.499 37.037 0.00 0.00 36.58 3.41
1552 4343 7.423199 GTCGTGTAATATGATAAGGAGACACA 58.577 38.462 0.00 0.00 36.58 3.72
1553 4344 6.577800 CGTCGTGTAATATGATAAGGAGACAC 59.422 42.308 0.00 0.00 34.10 3.67
1554 4345 6.484308 TCGTCGTGTAATATGATAAGGAGACA 59.516 38.462 0.00 0.00 0.00 3.41
1555 4346 6.895898 TCGTCGTGTAATATGATAAGGAGAC 58.104 40.000 0.00 0.00 0.00 3.36
1557 4348 7.201359 GCAATCGTCGTGTAATATGATAAGGAG 60.201 40.741 0.00 0.00 0.00 3.69
1558 4349 6.584942 GCAATCGTCGTGTAATATGATAAGGA 59.415 38.462 0.00 0.00 0.00 3.36
1559 4350 6.586463 AGCAATCGTCGTGTAATATGATAAGG 59.414 38.462 0.00 0.00 0.00 2.69
1561 4352 7.650104 TGAAGCAATCGTCGTGTAATATGATAA 59.350 33.333 0.00 0.00 0.00 1.75
1574 4368 3.243877 CCACTTATCTGAAGCAATCGTCG 59.756 47.826 0.00 0.00 0.00 5.12
1627 4421 0.963962 CTCCAAAACCTGCACAGCAT 59.036 50.000 0.00 0.00 38.13 3.79
1711 4966 0.247655 GCGTATGTGTGCGACATTGG 60.248 55.000 6.50 1.66 43.20 3.16
1728 4985 5.060693 CGAATGTTGATATCTCAGATCAGCG 59.939 44.000 3.98 0.00 37.35 5.18
1751 5020 4.367039 ACCCCAAATCCATATACCTTCG 57.633 45.455 0.00 0.00 0.00 3.79
1784 5053 0.460109 TGGAGCCATCAACATCGACG 60.460 55.000 0.00 0.00 0.00 5.12
1862 5131 7.273381 GCAACAACAACAAACCTATCATCATAC 59.727 37.037 0.00 0.00 0.00 2.39
2040 5320 3.710209 AATATGAGTAGGCATGAGGGC 57.290 47.619 0.00 0.00 43.80 5.19
2079 5360 6.095440 ACTGACGGCTATCAAATTGCTAAATT 59.905 34.615 0.00 0.00 37.61 1.82
2080 5361 5.590259 ACTGACGGCTATCAAATTGCTAAAT 59.410 36.000 0.00 0.00 0.00 1.40
2081 5362 4.941263 ACTGACGGCTATCAAATTGCTAAA 59.059 37.500 0.00 0.00 0.00 1.85
2082 5363 4.513442 ACTGACGGCTATCAAATTGCTAA 58.487 39.130 0.00 0.00 0.00 3.09
2219 5500 9.774742 CTAGGAAGATGCACTTGTTATTAAAAC 57.225 33.333 6.31 0.00 39.13 2.43
2220 5501 9.515226 ACTAGGAAGATGCACTTGTTATTAAAA 57.485 29.630 6.31 0.00 39.13 1.52
2224 5505 6.372659 CACACTAGGAAGATGCACTTGTTATT 59.627 38.462 6.31 0.00 39.13 1.40
2225 5506 5.877012 CACACTAGGAAGATGCACTTGTTAT 59.123 40.000 6.31 0.00 39.13 1.89
2264 5545 9.759259 GTTTTGCAAAAGCCATATAGAAAAATC 57.241 29.630 24.46 3.42 0.00 2.17
2282 5563 5.906113 TTACCTTCACTCTTGTTTTGCAA 57.094 34.783 0.00 0.00 35.50 4.08
2451 5732 8.746922 AATGACATGATCAATACACAAACAAC 57.253 30.769 0.00 0.00 41.93 3.32
2477 5758 6.275335 CCAAAATTAATGCCCTGTGATACAG 58.725 40.000 2.05 2.05 45.53 2.74
2486 5767 5.974156 ATAAAGGCCAAAATTAATGCCCT 57.026 34.783 5.01 0.00 45.14 5.19
2509 5790 8.585471 ATTTCAACAGTTCATGGATCTAACAT 57.415 30.769 0.00 0.00 0.00 2.71
2510 5791 7.884877 AGATTTCAACAGTTCATGGATCTAACA 59.115 33.333 0.00 0.00 0.00 2.41
2511 5792 8.273780 AGATTTCAACAGTTCATGGATCTAAC 57.726 34.615 0.00 0.00 0.00 2.34
2512 5793 8.868522 AAGATTTCAACAGTTCATGGATCTAA 57.131 30.769 0.00 0.00 0.00 2.10
2514 5795 7.668886 AGAAAGATTTCAACAGTTCATGGATCT 59.331 33.333 7.97 0.00 39.61 2.75
2515 5796 7.754027 CAGAAAGATTTCAACAGTTCATGGATC 59.246 37.037 7.97 0.00 39.61 3.36
2516 5797 7.449395 TCAGAAAGATTTCAACAGTTCATGGAT 59.551 33.333 7.97 0.00 39.61 3.41
2517 5798 6.772233 TCAGAAAGATTTCAACAGTTCATGGA 59.228 34.615 7.97 0.00 39.61 3.41
2518 5799 6.973843 TCAGAAAGATTTCAACAGTTCATGG 58.026 36.000 7.97 0.00 39.61 3.66
2519 5800 8.347771 TCTTCAGAAAGATTTCAACAGTTCATG 58.652 33.333 7.97 0.00 39.61 3.07
2520 5801 8.455903 TCTTCAGAAAGATTTCAACAGTTCAT 57.544 30.769 7.97 0.00 39.61 2.57
2521 5802 7.864108 TCTTCAGAAAGATTTCAACAGTTCA 57.136 32.000 7.97 0.00 39.61 3.18
2580 5971 6.764308 ACAACAGGGAAAGTCAATCATATG 57.236 37.500 0.00 0.00 0.00 1.78
2643 6096 6.515272 AACTCTTTTGCACAGAAGAGAAAA 57.485 33.333 28.02 7.27 46.61 2.29
2689 6142 1.183676 ACGGTGTGGTCTACTGGTCC 61.184 60.000 0.00 0.00 0.00 4.46
2723 6177 9.706691 AAAAAGACGAGATAGAAACATGTTAGA 57.293 29.630 12.39 0.24 0.00 2.10
2756 6213 4.765339 GTCTAAAACCCATGGCAACTACTT 59.235 41.667 6.09 0.00 37.61 2.24
2757 6214 4.042934 AGTCTAAAACCCATGGCAACTACT 59.957 41.667 6.09 0.44 37.61 2.57
2758 6215 4.332828 AGTCTAAAACCCATGGCAACTAC 58.667 43.478 6.09 0.00 37.61 2.73
2760 6217 3.525800 AGTCTAAAACCCATGGCAACT 57.474 42.857 6.09 0.00 37.61 3.16
2761 6218 3.860754 GCAAGTCTAAAACCCATGGCAAC 60.861 47.826 6.09 0.00 0.00 4.17
2762 6219 2.298729 GCAAGTCTAAAACCCATGGCAA 59.701 45.455 6.09 0.00 0.00 4.52
2763 6220 1.892474 GCAAGTCTAAAACCCATGGCA 59.108 47.619 6.09 0.00 0.00 4.92
2764 6221 1.892474 TGCAAGTCTAAAACCCATGGC 59.108 47.619 6.09 0.00 0.00 4.40
2799 6774 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
2800 6775 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2801 6776 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2802 6777 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2803 6778 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2804 6779 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2805 6780 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2806 6781 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2807 6782 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
2808 6783 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2809 6784 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
2817 6792 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
2818 6793 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
2820 6795 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
2821 6796 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
2828 6803 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
2829 6804 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
2830 6805 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
2831 6806 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
2832 6807 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
2833 6808 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
2834 6809 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
2835 6810 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
2836 6811 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
2837 6812 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
2838 6813 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
2839 6814 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
2840 6815 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
2841 6816 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
2842 6817 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
2845 6820 9.577110 CCTAATACTAAAACGTGACTTGATACA 57.423 33.333 0.00 0.00 0.00 2.29
2846 6821 9.578439 ACCTAATACTAAAACGTGACTTGATAC 57.422 33.333 0.00 0.00 0.00 2.24
2848 6823 9.578439 GTACCTAATACTAAAACGTGACTTGAT 57.422 33.333 0.00 0.00 0.00 2.57
2849 6824 8.575589 TGTACCTAATACTAAAACGTGACTTGA 58.424 33.333 0.00 0.00 34.56 3.02
2850 6825 8.746922 TGTACCTAATACTAAAACGTGACTTG 57.253 34.615 0.00 0.00 34.56 3.16
2851 6826 9.578439 GATGTACCTAATACTAAAACGTGACTT 57.422 33.333 0.00 0.00 34.56 3.01
2852 6827 8.193438 GGATGTACCTAATACTAAAACGTGACT 58.807 37.037 0.00 0.00 34.56 3.41
2853 6828 7.166473 CGGATGTACCTAATACTAAAACGTGAC 59.834 40.741 0.00 0.00 34.56 3.67
2854 6829 7.148086 ACGGATGTACCTAATACTAAAACGTGA 60.148 37.037 0.00 0.00 34.56 4.35
2855 6830 6.974622 ACGGATGTACCTAATACTAAAACGTG 59.025 38.462 0.00 0.00 34.56 4.49
2856 6831 7.100458 ACGGATGTACCTAATACTAAAACGT 57.900 36.000 0.00 0.00 34.56 3.99
2857 6832 9.334693 GATACGGATGTACCTAATACTAAAACG 57.665 37.037 0.00 0.00 34.56 3.60
2863 6838 8.600668 TGTCTAGATACGGATGTACCTAATACT 58.399 37.037 0.00 0.00 34.56 2.12
2864 6839 8.783833 TGTCTAGATACGGATGTACCTAATAC 57.216 38.462 0.00 0.00 36.31 1.89
2865 6840 9.797642 TTTGTCTAGATACGGATGTACCTAATA 57.202 33.333 0.00 0.00 36.31 0.98
2866 6841 8.701908 TTTGTCTAGATACGGATGTACCTAAT 57.298 34.615 0.00 0.00 36.31 1.73
2867 6842 8.701908 ATTTGTCTAGATACGGATGTACCTAA 57.298 34.615 0.00 0.00 36.31 2.69
2868 6843 8.162085 AGATTTGTCTAGATACGGATGTACCTA 58.838 37.037 0.00 0.00 36.31 3.08
2869 6844 7.005296 AGATTTGTCTAGATACGGATGTACCT 58.995 38.462 0.00 0.00 36.31 3.08
2870 6845 7.216973 AGATTTGTCTAGATACGGATGTACC 57.783 40.000 0.00 0.00 32.26 3.34
2871 6846 9.828852 CTTAGATTTGTCTAGATACGGATGTAC 57.171 37.037 0.00 0.00 32.26 2.90
2872 6847 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
2873 6848 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
2874 6849 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
2875 6850 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
2876 6851 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
2877 6852 8.622157 TCTTGTCTTAGATTTGTCTAGATACGG 58.378 37.037 0.00 0.00 0.00 4.02
2885 6860 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
2886 6861 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2887 6862 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
2888 6863 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
2889 6864 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2890 6865 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2891 6866 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2892 6867 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2893 6868 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2894 6869 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2895 6870 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2896 6871 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2897 6872 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2898 6873 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2899 6874 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2900 6875 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2901 6876 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2902 6877 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2903 6878 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2904 6879 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
2905 6880 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
2906 6881 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
2907 6882 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
2908 6883 0.042131 AATGTACTCCCTCCGTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
2909 6884 1.201424 AAATGTACTCCCTCCGTCCC 58.799 55.000 0.00 0.00 0.00 4.46
2910 6885 3.345508 AAAAATGTACTCCCTCCGTCC 57.654 47.619 0.00 0.00 0.00 4.79
2937 6912 3.731216 CAGACACGACTAAACAGTGACTG 59.269 47.826 11.70 11.70 45.86 3.51
2953 6928 4.436050 CGATGAACTGCAAATACCAGACAC 60.436 45.833 0.00 0.00 34.47 3.67
2959 6934 4.616802 CACAAACGATGAACTGCAAATACC 59.383 41.667 0.00 0.00 0.00 2.73
2974 6949 4.442375 ACAAAACAACATCCACAAACGA 57.558 36.364 0.00 0.00 0.00 3.85
2975 6950 4.862018 AGAACAAAACAACATCCACAAACG 59.138 37.500 0.00 0.00 0.00 3.60
2981 6956 4.531854 TCCTCAGAACAAAACAACATCCA 58.468 39.130 0.00 0.00 0.00 3.41
2982 6957 5.712152 ATCCTCAGAACAAAACAACATCC 57.288 39.130 0.00 0.00 0.00 3.51
2986 6961 8.352942 AGTGAATTATCCTCAGAACAAAACAAC 58.647 33.333 0.00 0.00 0.00 3.32
2987 6962 8.352201 CAGTGAATTATCCTCAGAACAAAACAA 58.648 33.333 0.00 0.00 0.00 2.83
3122 7098 9.461312 AGCAATATAACTTGAACTAACCATTGA 57.539 29.630 0.00 0.00 0.00 2.57
3172 7151 7.337942 CAGAGGTACCTCAATAGCAAAAGAATT 59.662 37.037 37.27 13.11 44.99 2.17
3295 7274 8.367660 TCCCACCTAGATATAGCTTGAAATAG 57.632 38.462 0.00 0.00 0.00 1.73
3314 7293 5.003804 ACTCGCATATCATATTTTCCCACC 58.996 41.667 0.00 0.00 0.00 4.61
3508 7497 8.774586 GTGTAGAGACAAAAGAGAATTTAGCAA 58.225 33.333 0.00 0.00 37.31 3.91
3527 7516 2.379972 ACTTCCCGATCAGGTGTAGAG 58.620 52.381 0.00 0.00 38.74 2.43
3540 7529 5.824904 AATTTCATCATCTCAACTTCCCG 57.175 39.130 0.00 0.00 0.00 5.14
3566 7555 2.496899 TGGAGATGAGGCTGGAAAAC 57.503 50.000 0.00 0.00 0.00 2.43
3592 7581 4.141846 TGGTCCTTCAGATCACATAGCTTC 60.142 45.833 0.00 0.00 27.56 3.86
3596 7585 3.963374 TCCTGGTCCTTCAGATCACATAG 59.037 47.826 0.00 0.00 36.93 2.23
3659 7648 8.761689 AGGTTTTATCATGGATGCAACTAATTT 58.238 29.630 0.00 0.00 0.00 1.82
3685 7674 6.969993 AAAGTTCTACCCTGCACAATTTTA 57.030 33.333 0.00 0.00 0.00 1.52
3747 7736 2.752903 ACAAAAAGAACACCAACGAGCT 59.247 40.909 0.00 0.00 0.00 4.09
3755 7744 9.934190 TTAAAGATACGTAACAAAAAGAACACC 57.066 29.630 0.00 0.00 0.00 4.16
3886 7875 6.036577 TCAAGAATGCCCTTATTGAAAACC 57.963 37.500 4.30 0.00 40.99 3.27
3904 7893 2.354510 CACCTTCAAGCAACGTTCAAGA 59.645 45.455 0.00 0.00 0.00 3.02
3951 7940 7.496346 AGTTTATCAACTGATACTGGAAGGA 57.504 36.000 0.00 0.00 42.05 3.36
3952 7941 7.824289 TGAAGTTTATCAACTGATACTGGAAGG 59.176 37.037 0.00 0.00 42.89 3.46
3955 7944 6.818644 GCTGAAGTTTATCAACTGATACTGGA 59.181 38.462 0.00 0.00 42.89 3.86
4111 8100 9.329913 GGCGTATATAATTTGAAGTGCATAAAG 57.670 33.333 0.00 0.00 0.00 1.85
4236 8229 2.497138 TCACACAGCTTTGATGACTGG 58.503 47.619 6.92 0.00 35.70 4.00
4272 8265 5.824421 AGGTGATCCATCTTTTCTTCACAT 58.176 37.500 0.00 0.00 36.16 3.21
4284 8277 2.686915 CAAGGCTTGAAGGTGATCCATC 59.313 50.000 22.64 0.00 35.89 3.51
4308 8301 3.903090 TGAATTTTGCCATGGAAGGAAGT 59.097 39.130 18.40 2.94 0.00 3.01
4419 8412 5.049405 AGGTATCTTGCGTTGAAAGAAACAG 60.049 40.000 0.00 0.00 37.22 3.16
4448 8441 1.746220 AGTGGACGATTTCTCTCCTCG 59.254 52.381 0.00 0.00 38.34 4.63
4662 8657 5.179555 AGAAAAGGTGCTTAAAGCTAGTTCG 59.820 40.000 0.00 0.00 42.97 3.95
4732 8727 5.320549 ACTTTGGCATTTCACAGATGATC 57.679 39.130 0.00 0.00 33.85 2.92
4775 8772 4.142600 CGAGAGTTTCCAGGCCTTAAAATG 60.143 45.833 13.48 0.00 0.00 2.32
4851 8848 6.582295 CGATATTTTTGCCATACCATTAGTGC 59.418 38.462 0.00 0.00 0.00 4.40
4906 8904 4.311816 ACAGCATCTTCCAAAAAGTGTG 57.688 40.909 0.00 0.00 0.00 3.82
4979 8977 5.106515 CGACACCACGAGAGATCATATGTAT 60.107 44.000 1.90 0.00 35.09 2.29
4980 8978 4.213482 CGACACCACGAGAGATCATATGTA 59.787 45.833 1.90 0.00 35.09 2.29
4981 8979 3.003793 CGACACCACGAGAGATCATATGT 59.996 47.826 1.90 0.00 35.09 2.29
4982 8980 3.003793 ACGACACCACGAGAGATCATATG 59.996 47.826 0.00 0.00 37.03 1.78
5117 9120 2.092914 CCACCATGGTTAGGGAGAAGAC 60.093 54.545 16.84 0.00 31.35 3.01
5414 9439 0.379669 CGCCCATCTGCTCATCAAAC 59.620 55.000 0.00 0.00 0.00 2.93
5419 9444 1.374190 GGATCGCCCATCTGCTCAT 59.626 57.895 0.00 0.00 34.14 2.90
5433 9459 3.194116 ACAGCATGACAACAATTGGGATC 59.806 43.478 10.83 4.40 39.69 3.36
5457 9483 5.393962 CAGTGCCAATAAACAGCTAAGAAC 58.606 41.667 0.00 0.00 0.00 3.01
5490 9516 0.828343 ATCGACCGATCCTTCCCCTC 60.828 60.000 0.00 0.00 0.00 4.30
5508 9534 1.941377 TGTACAGGGGTAACACCGAT 58.059 50.000 0.00 0.00 46.76 4.18
5605 9631 3.447229 TCTGAAGTCGCAACCATCTATCA 59.553 43.478 0.00 0.00 0.00 2.15
5652 9684 3.399330 TCCGCCTTCCGATTTTATCATC 58.601 45.455 0.00 0.00 40.02 2.92
5748 9780 2.082140 ATCAGTACACCCTGGCGATA 57.918 50.000 0.00 0.00 33.14 2.92
5752 9784 2.500098 TCACTAATCAGTACACCCTGGC 59.500 50.000 0.00 0.00 32.21 4.85
5824 9856 4.543590 ATCTCTCAGATGTCCGTTTTGT 57.456 40.909 0.00 0.00 32.80 2.83
5881 9913 9.620259 TTCCACTTACATATACATACAATGCAA 57.380 29.630 0.00 0.00 0.00 4.08
5972 10010 5.125100 TCAATTCAAATCTGGAACTGCAC 57.875 39.130 0.00 0.00 0.00 4.57
6014 10052 4.000988 GGCGAGACCTTGTTAGAATTTGA 58.999 43.478 0.00 0.00 34.51 2.69
6034 10072 1.464997 CTTTACAGAGGAAGCAACGGC 59.535 52.381 0.00 0.00 41.61 5.68
6036 10074 5.613358 ATTTCTTTACAGAGGAAGCAACG 57.387 39.130 0.00 0.00 0.00 4.10
6043 10081 6.708949 ACGCTTTTGTATTTCTTTACAGAGGA 59.291 34.615 0.00 0.00 33.81 3.71
6044 10082 6.899114 ACGCTTTTGTATTTCTTTACAGAGG 58.101 36.000 0.00 0.00 33.81 3.69
6045 10083 8.782533 AAACGCTTTTGTATTTCTTTACAGAG 57.217 30.769 0.00 0.00 33.81 3.35
6046 10084 9.872757 CTAAACGCTTTTGTATTTCTTTACAGA 57.127 29.630 0.00 0.00 33.81 3.41
6047 10085 9.872757 TCTAAACGCTTTTGTATTTCTTTACAG 57.127 29.630 0.00 0.00 33.81 2.74
6051 10089 9.394477 GTGATCTAAACGCTTTTGTATTTCTTT 57.606 29.630 0.00 0.00 0.00 2.52
6052 10090 8.784043 AGTGATCTAAACGCTTTTGTATTTCTT 58.216 29.630 0.00 0.00 0.00 2.52
6053 10091 8.324163 AGTGATCTAAACGCTTTTGTATTTCT 57.676 30.769 0.00 0.00 0.00 2.52
6059 10097 9.216117 ACTTTATAGTGATCTAAACGCTTTTGT 57.784 29.630 0.00 0.00 31.99 2.83
6063 10101 9.517609 CACTACTTTATAGTGATCTAAACGCTT 57.482 33.333 8.13 0.00 45.69 4.68
6064 10102 8.900781 TCACTACTTTATAGTGATCTAAACGCT 58.099 33.333 11.77 0.00 46.16 5.07
6075 10113 7.197017 AGCGTTCAGATCACTACTTTATAGTG 58.803 38.462 7.61 7.61 44.56 2.74
6076 10114 7.336161 AGCGTTCAGATCACTACTTTATAGT 57.664 36.000 0.00 0.00 38.44 2.12
6077 10115 6.575572 CGAGCGTTCAGATCACTACTTTATAG 59.424 42.308 0.00 0.00 34.30 1.31
6078 10116 6.259387 TCGAGCGTTCAGATCACTACTTTATA 59.741 38.462 0.00 0.00 34.30 0.98
6079 10117 5.066117 TCGAGCGTTCAGATCACTACTTTAT 59.934 40.000 0.00 0.00 34.30 1.40
6080 10118 4.393990 TCGAGCGTTCAGATCACTACTTTA 59.606 41.667 0.00 0.00 34.30 1.85
6081 10119 3.190744 TCGAGCGTTCAGATCACTACTTT 59.809 43.478 0.00 0.00 34.30 2.66
6082 10120 2.747989 TCGAGCGTTCAGATCACTACTT 59.252 45.455 0.00 0.00 34.30 2.24
6083 10121 2.357075 TCGAGCGTTCAGATCACTACT 58.643 47.619 0.00 0.00 34.30 2.57
6084 10122 2.826979 TCGAGCGTTCAGATCACTAC 57.173 50.000 0.00 0.00 34.30 2.73
6085 10123 5.690997 ATATTCGAGCGTTCAGATCACTA 57.309 39.130 0.00 0.00 34.30 2.74
6086 10124 2.949451 ATTCGAGCGTTCAGATCACT 57.051 45.000 0.00 0.00 34.30 3.41
6087 10125 4.740205 TGAATATTCGAGCGTTCAGATCAC 59.260 41.667 10.80 0.00 34.30 3.06
6088 10126 4.932146 TGAATATTCGAGCGTTCAGATCA 58.068 39.130 10.80 0.00 34.30 2.92
6089 10127 6.295110 CAATGAATATTCGAGCGTTCAGATC 58.705 40.000 10.80 0.00 34.45 2.75
6090 10128 5.178252 CCAATGAATATTCGAGCGTTCAGAT 59.822 40.000 10.80 0.00 34.45 2.90
6091 10129 4.507756 CCAATGAATATTCGAGCGTTCAGA 59.492 41.667 10.80 0.00 34.45 3.27
6092 10130 4.507756 TCCAATGAATATTCGAGCGTTCAG 59.492 41.667 10.80 0.00 34.45 3.02
6093 10131 4.438148 TCCAATGAATATTCGAGCGTTCA 58.562 39.130 10.80 9.77 35.33 3.18
6094 10132 4.745125 TCTCCAATGAATATTCGAGCGTTC 59.255 41.667 10.80 0.00 33.25 3.95
6095 10133 4.693283 TCTCCAATGAATATTCGAGCGTT 58.307 39.130 10.80 0.00 33.25 4.84
6096 10134 4.302455 CTCTCCAATGAATATTCGAGCGT 58.698 43.478 10.80 0.00 33.25 5.07
6097 10135 3.677121 CCTCTCCAATGAATATTCGAGCG 59.323 47.826 10.80 6.14 33.25 5.03
6098 10136 4.688413 GTCCTCTCCAATGAATATTCGAGC 59.312 45.833 10.80 0.00 33.25 5.03
6099 10137 4.920340 CGTCCTCTCCAATGAATATTCGAG 59.080 45.833 10.80 10.50 34.15 4.04
6100 10138 4.583073 TCGTCCTCTCCAATGAATATTCGA 59.417 41.667 10.80 1.35 0.00 3.71
6101 10139 4.871513 TCGTCCTCTCCAATGAATATTCG 58.128 43.478 10.80 0.00 0.00 3.34
6146 10184 1.866059 CGATACGAACGAGCGCACA 60.866 57.895 11.47 0.00 33.86 4.57
6149 10187 2.728427 ATCCCGATACGAACGAGCGC 62.728 60.000 0.00 0.00 33.86 5.92
6190 10228 1.477014 GCCTAATTACTGTCCCAGGCC 60.477 57.143 0.00 0.00 42.20 5.19
6197 10236 1.138266 TCCTGGCGCCTAATTACTGTC 59.862 52.381 29.70 0.00 0.00 3.51
6213 10252 0.310854 GCCAACACGGTTCTTTCCTG 59.689 55.000 0.00 0.00 36.97 3.86
6329 10368 0.249398 GGTTGCAGACGGTACTGGAT 59.751 55.000 6.65 0.00 37.98 3.41
6358 10397 1.801913 CTTCAGTTCGGTCGGAGCG 60.802 63.158 22.43 22.43 40.97 5.03
6363 10402 1.006102 ACAGGCTTCAGTTCGGTCG 60.006 57.895 0.00 0.00 0.00 4.79
6404 10444 9.442047 GAGTAATAATAAGCAGAACCATAGCAT 57.558 33.333 0.00 0.00 0.00 3.79
6412 10452 6.292919 CGGCAAGGAGTAATAATAAGCAGAAC 60.293 42.308 0.00 0.00 0.00 3.01
6415 10455 5.057149 ACGGCAAGGAGTAATAATAAGCAG 58.943 41.667 0.00 0.00 0.00 4.24
6425 10465 3.259876 ACTTCATGTACGGCAAGGAGTAA 59.740 43.478 0.00 0.00 0.00 2.24
6472 10541 9.185192 GGACTTAACAAAATCTTGTCAAATCAG 57.815 33.333 0.00 0.00 45.25 2.90
6492 10561 2.466846 TGCCTGCTCATACTGGACTTA 58.533 47.619 0.00 0.00 0.00 2.24
6497 10566 1.209019 AGTCTTGCCTGCTCATACTGG 59.791 52.381 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.