Multiple sequence alignment - TraesCS5B01G465600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G465600 chr5B 100.000 2208 0 0 1 2208 640095291 640093084 0.000000e+00 4078.0
1 TraesCS5B01G465600 chr5B 86.765 68 9 0 1 68 639964789 639964722 2.350000e-10 76.8
2 TraesCS5B01G465600 chr2B 86.101 1734 208 23 500 2208 33930472 33928747 0.000000e+00 1836.0
3 TraesCS5B01G465600 chr2B 85.401 137 18 2 83 219 799524105 799523971 8.220000e-30 141.0
4 TraesCS5B01G465600 chr6B 85.495 1696 221 20 521 2208 352083394 352085072 0.000000e+00 1746.0
5 TraesCS5B01G465600 chr3A 84.629 1698 238 15 531 2208 373339268 373340962 0.000000e+00 1668.0
6 TraesCS5B01G465600 chr3A 91.270 252 21 1 500 751 746062583 746062333 2.100000e-90 342.0
7 TraesCS5B01G465600 chr3A 84.058 138 19 3 83 220 68290239 68290373 1.780000e-26 130.0
8 TraesCS5B01G465600 chr1A 84.691 1620 240 8 595 2208 533780518 533782135 0.000000e+00 1611.0
9 TraesCS5B01G465600 chr1A 84.672 1618 235 11 598 2208 396450069 396448458 0.000000e+00 1602.0
10 TraesCS5B01G465600 chr1A 84.200 1462 224 7 751 2208 568032367 568030909 0.000000e+00 1413.0
11 TraesCS5B01G465600 chr1A 84.507 142 17 5 81 220 518867763 518867901 3.820000e-28 135.0
12 TraesCS5B01G465600 chr1A 83.453 139 19 4 73 211 41746109 41745975 2.300000e-25 126.0
13 TraesCS5B01G465600 chr6A 83.405 1633 247 16 596 2208 67638616 67636988 0.000000e+00 1493.0
14 TraesCS5B01G465600 chr6A 84.962 1463 210 8 751 2208 117426734 117428191 0.000000e+00 1474.0
15 TraesCS5B01G465600 chr7A 84.016 1464 228 6 749 2208 640659619 640658158 0.000000e+00 1402.0
16 TraesCS5B01G465600 chr5A 94.366 284 16 0 216 499 636640713 636640430 9.360000e-119 436.0
17 TraesCS5B01G465600 chr5A 90.698 86 8 0 1 86 636640794 636640709 4.980000e-22 115.0
18 TraesCS5B01G465600 chr3D 90.000 140 12 2 78 217 379817623 379817486 1.740000e-41 180.0
19 TraesCS5B01G465600 chr2A 89.855 138 11 2 83 219 447146332 447146467 8.100000e-40 174.0
20 TraesCS5B01G465600 chr2A 84.559 136 19 1 85 220 729852279 729852146 1.380000e-27 134.0
21 TraesCS5B01G465600 chr2D 88.406 138 13 3 83 219 336966830 336966965 1.750000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G465600 chr5B 640093084 640095291 2207 True 4078 4078 100.000 1 2208 1 chr5B.!!$R2 2207
1 TraesCS5B01G465600 chr2B 33928747 33930472 1725 True 1836 1836 86.101 500 2208 1 chr2B.!!$R1 1708
2 TraesCS5B01G465600 chr6B 352083394 352085072 1678 False 1746 1746 85.495 521 2208 1 chr6B.!!$F1 1687
3 TraesCS5B01G465600 chr3A 373339268 373340962 1694 False 1668 1668 84.629 531 2208 1 chr3A.!!$F2 1677
4 TraesCS5B01G465600 chr1A 533780518 533782135 1617 False 1611 1611 84.691 595 2208 1 chr1A.!!$F2 1613
5 TraesCS5B01G465600 chr1A 396448458 396450069 1611 True 1602 1602 84.672 598 2208 1 chr1A.!!$R2 1610
6 TraesCS5B01G465600 chr1A 568030909 568032367 1458 True 1413 1413 84.200 751 2208 1 chr1A.!!$R3 1457
7 TraesCS5B01G465600 chr6A 67636988 67638616 1628 True 1493 1493 83.405 596 2208 1 chr6A.!!$R1 1612
8 TraesCS5B01G465600 chr6A 117426734 117428191 1457 False 1474 1474 84.962 751 2208 1 chr6A.!!$F1 1457
9 TraesCS5B01G465600 chr7A 640658158 640659619 1461 True 1402 1402 84.016 749 2208 1 chr7A.!!$R1 1459

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
62 63 0.03759 CCGTGGGATTTGAGGGAACA 59.962 55.0 0.0 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1963 1998 0.035152 TTGGCACTAGGGACATGCAG 60.035 55.0 0.0 0.0 41.27 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.346751 TGTTTTTCCTGATGTAAAGAAAGCT 57.653 32.000 0.00 0.00 30.49 3.74
26 27 7.425606 TGTTTTTCCTGATGTAAAGAAAGCTC 58.574 34.615 0.00 0.00 30.49 4.09
27 28 7.068103 TGTTTTTCCTGATGTAAAGAAAGCTCA 59.932 33.333 0.00 0.00 30.49 4.26
28 29 7.581213 TTTTCCTGATGTAAAGAAAGCTCAA 57.419 32.000 0.00 0.00 30.49 3.02
29 30 6.560253 TTCCTGATGTAAAGAAAGCTCAAC 57.440 37.500 0.00 0.00 0.00 3.18
30 31 5.869579 TCCTGATGTAAAGAAAGCTCAACT 58.130 37.500 0.00 0.00 0.00 3.16
31 32 7.004555 TCCTGATGTAAAGAAAGCTCAACTA 57.995 36.000 0.00 0.00 0.00 2.24
32 33 7.099764 TCCTGATGTAAAGAAAGCTCAACTAG 58.900 38.462 0.00 0.00 0.00 2.57
42 43 2.706555 GCTCAACTAGCCAAACAACC 57.293 50.000 0.00 0.00 46.25 3.77
43 44 1.269723 GCTCAACTAGCCAAACAACCC 59.730 52.381 0.00 0.00 46.25 4.11
44 45 1.886542 CTCAACTAGCCAAACAACCCC 59.113 52.381 0.00 0.00 0.00 4.95
45 46 0.596082 CAACTAGCCAAACAACCCCG 59.404 55.000 0.00 0.00 0.00 5.73
46 47 0.184211 AACTAGCCAAACAACCCCGT 59.816 50.000 0.00 0.00 0.00 5.28
47 48 0.536460 ACTAGCCAAACAACCCCGTG 60.536 55.000 0.00 0.00 0.00 4.94
48 49 1.228306 TAGCCAAACAACCCCGTGG 60.228 57.895 0.00 0.00 37.80 4.94
59 60 3.410541 CCCGTGGGATTTGAGGGA 58.589 61.111 0.00 0.00 44.70 4.20
60 61 1.688811 CCCGTGGGATTTGAGGGAA 59.311 57.895 0.00 0.00 44.70 3.97
61 62 0.679960 CCCGTGGGATTTGAGGGAAC 60.680 60.000 0.00 0.00 44.70 3.62
62 63 0.037590 CCGTGGGATTTGAGGGAACA 59.962 55.000 0.00 0.00 0.00 3.18
63 64 1.340991 CCGTGGGATTTGAGGGAACAT 60.341 52.381 0.00 0.00 0.00 2.71
64 65 2.092646 CCGTGGGATTTGAGGGAACATA 60.093 50.000 0.00 0.00 0.00 2.29
65 66 3.435026 CCGTGGGATTTGAGGGAACATAT 60.435 47.826 0.00 0.00 0.00 1.78
66 67 3.565482 CGTGGGATTTGAGGGAACATATG 59.435 47.826 0.00 0.00 0.00 1.78
67 68 4.536765 GTGGGATTTGAGGGAACATATGT 58.463 43.478 1.41 1.41 0.00 2.29
68 69 4.956075 GTGGGATTTGAGGGAACATATGTT 59.044 41.667 20.93 20.93 41.64 2.71
69 70 5.422012 GTGGGATTTGAGGGAACATATGTTT 59.578 40.000 21.63 6.76 38.56 2.83
70 71 5.421693 TGGGATTTGAGGGAACATATGTTTG 59.578 40.000 21.63 0.00 38.56 2.93
71 72 5.163416 GGGATTTGAGGGAACATATGTTTGG 60.163 44.000 21.63 0.00 38.56 3.28
72 73 4.799564 TTTGAGGGAACATATGTTTGGC 57.200 40.909 21.63 9.56 38.56 4.52
73 74 3.448093 TGAGGGAACATATGTTTGGCA 57.552 42.857 21.63 14.29 38.56 4.92
74 75 3.772387 TGAGGGAACATATGTTTGGCAA 58.228 40.909 21.63 0.00 38.56 4.52
75 76 4.155709 TGAGGGAACATATGTTTGGCAAA 58.844 39.130 21.63 8.93 38.56 3.68
76 77 4.590647 TGAGGGAACATATGTTTGGCAAAA 59.409 37.500 21.63 5.80 38.56 2.44
77 78 4.893608 AGGGAACATATGTTTGGCAAAAC 58.106 39.130 21.63 9.94 45.00 2.43
88 89 4.242475 GTTTGGCAAAACATACTAAGGCC 58.758 43.478 15.29 0.00 44.30 5.19
89 90 2.452505 TGGCAAAACATACTAAGGCCC 58.547 47.619 0.00 0.00 39.15 5.80
90 91 2.042433 TGGCAAAACATACTAAGGCCCT 59.958 45.455 0.00 0.00 39.15 5.19
91 92 2.427095 GGCAAAACATACTAAGGCCCTG 59.573 50.000 0.00 0.00 33.93 4.45
92 93 3.089284 GCAAAACATACTAAGGCCCTGT 58.911 45.455 0.00 0.00 0.00 4.00
93 94 3.509967 GCAAAACATACTAAGGCCCTGTT 59.490 43.478 0.00 0.00 0.00 3.16
94 95 4.380550 GCAAAACATACTAAGGCCCTGTTC 60.381 45.833 0.00 0.00 0.00 3.18
95 96 2.981859 ACATACTAAGGCCCTGTTCG 57.018 50.000 0.00 0.00 0.00 3.95
96 97 1.485066 ACATACTAAGGCCCTGTTCGG 59.515 52.381 0.00 0.00 0.00 4.30
97 98 1.760613 CATACTAAGGCCCTGTTCGGA 59.239 52.381 0.00 0.00 33.16 4.55
98 99 1.941377 TACTAAGGCCCTGTTCGGAA 58.059 50.000 0.00 0.00 33.16 4.30
99 100 1.286248 ACTAAGGCCCTGTTCGGAAT 58.714 50.000 0.00 0.00 33.16 3.01
100 101 1.209747 ACTAAGGCCCTGTTCGGAATC 59.790 52.381 0.00 0.00 33.16 2.52
101 102 1.486726 CTAAGGCCCTGTTCGGAATCT 59.513 52.381 0.00 0.00 33.16 2.40
102 103 1.580059 AAGGCCCTGTTCGGAATCTA 58.420 50.000 0.00 0.00 33.16 1.98
103 104 1.807814 AGGCCCTGTTCGGAATCTAT 58.192 50.000 0.00 0.00 33.16 1.98
104 105 1.694696 AGGCCCTGTTCGGAATCTATC 59.305 52.381 0.00 0.00 33.16 2.08
105 106 1.694696 GGCCCTGTTCGGAATCTATCT 59.305 52.381 0.00 0.00 33.16 1.98
106 107 2.289133 GGCCCTGTTCGGAATCTATCTC 60.289 54.545 0.00 0.00 33.16 2.75
107 108 2.289133 GCCCTGTTCGGAATCTATCTCC 60.289 54.545 0.00 0.00 33.16 3.71
108 109 3.235200 CCCTGTTCGGAATCTATCTCCT 58.765 50.000 0.00 0.00 33.16 3.69
109 110 3.257127 CCCTGTTCGGAATCTATCTCCTC 59.743 52.174 0.00 0.00 33.16 3.71
110 111 3.257127 CCTGTTCGGAATCTATCTCCTCC 59.743 52.174 0.00 0.00 33.16 4.30
113 114 0.169230 CGGAATCTATCTCCTCCGCG 59.831 60.000 0.00 0.00 43.83 6.46
114 115 0.528470 GGAATCTATCTCCTCCGCGG 59.472 60.000 22.12 22.12 0.00 6.46
115 116 1.535833 GAATCTATCTCCTCCGCGGA 58.464 55.000 29.03 29.03 40.30 5.54
141 142 0.039165 CGGAGCTTGGTTTTGGAAGC 60.039 55.000 0.00 0.00 44.16 3.86
144 145 3.894257 GCTTGGTTTTGGAAGCTCC 57.106 52.632 0.00 0.00 41.21 4.70
145 146 0.039165 GCTTGGTTTTGGAAGCTCCG 60.039 55.000 0.00 0.00 40.17 4.63
146 147 1.318576 CTTGGTTTTGGAAGCTCCGT 58.681 50.000 0.00 0.00 40.17 4.69
147 148 1.266989 CTTGGTTTTGGAAGCTCCGTC 59.733 52.381 0.00 0.00 40.17 4.79
148 149 0.181587 TGGTTTTGGAAGCTCCGTCA 59.818 50.000 0.00 0.00 40.17 4.35
149 150 1.314730 GGTTTTGGAAGCTCCGTCAA 58.685 50.000 0.00 0.00 40.17 3.18
150 151 1.679153 GGTTTTGGAAGCTCCGTCAAA 59.321 47.619 0.00 0.00 40.17 2.69
151 152 2.287608 GGTTTTGGAAGCTCCGTCAAAG 60.288 50.000 0.00 0.00 40.17 2.77
152 153 2.341846 TTTGGAAGCTCCGTCAAAGT 57.658 45.000 0.00 0.00 40.17 2.66
153 154 1.593196 TTGGAAGCTCCGTCAAAGTG 58.407 50.000 0.00 0.00 40.17 3.16
154 155 0.756294 TGGAAGCTCCGTCAAAGTGA 59.244 50.000 0.00 0.00 40.17 3.41
155 156 1.270305 TGGAAGCTCCGTCAAAGTGAG 60.270 52.381 0.00 0.00 40.17 3.51
156 157 1.270358 GGAAGCTCCGTCAAAGTGAGT 60.270 52.381 0.00 0.00 0.00 3.41
157 158 2.484889 GAAGCTCCGTCAAAGTGAGTT 58.515 47.619 0.00 0.00 0.00 3.01
158 159 1.871080 AGCTCCGTCAAAGTGAGTTG 58.129 50.000 0.00 0.00 0.00 3.16
159 160 0.235926 GCTCCGTCAAAGTGAGTTGC 59.764 55.000 0.00 0.00 0.00 4.17
160 161 1.581934 CTCCGTCAAAGTGAGTTGCA 58.418 50.000 0.00 0.00 0.00 4.08
161 162 1.528586 CTCCGTCAAAGTGAGTTGCAG 59.471 52.381 0.00 0.00 0.00 4.41
162 163 1.134521 TCCGTCAAAGTGAGTTGCAGT 60.135 47.619 0.00 0.00 0.00 4.40
163 164 1.670811 CCGTCAAAGTGAGTTGCAGTT 59.329 47.619 0.00 0.00 41.88 3.16
165 166 3.354397 CGTCAAAGTGAGTTGCAGTTTC 58.646 45.455 0.00 0.00 44.77 2.78
166 167 3.354397 GTCAAAGTGAGTTGCAGTTTCG 58.646 45.455 0.00 0.00 44.77 3.46
167 168 3.006940 TCAAAGTGAGTTGCAGTTTCGT 58.993 40.909 0.00 0.00 44.77 3.85
168 169 3.063452 TCAAAGTGAGTTGCAGTTTCGTC 59.937 43.478 0.00 0.00 44.77 4.20
169 170 2.309528 AGTGAGTTGCAGTTTCGTCA 57.690 45.000 0.00 0.00 0.00 4.35
170 171 2.205074 AGTGAGTTGCAGTTTCGTCAG 58.795 47.619 0.00 0.00 0.00 3.51
171 172 0.937304 TGAGTTGCAGTTTCGTCAGC 59.063 50.000 0.00 0.00 0.00 4.26
172 173 1.221414 GAGTTGCAGTTTCGTCAGCT 58.779 50.000 0.00 0.00 0.00 4.24
173 174 1.193426 GAGTTGCAGTTTCGTCAGCTC 59.807 52.381 0.00 0.00 32.54 4.09
174 175 0.235926 GTTGCAGTTTCGTCAGCTCC 59.764 55.000 0.00 0.00 0.00 4.70
175 176 0.179059 TTGCAGTTTCGTCAGCTCCA 60.179 50.000 0.00 0.00 0.00 3.86
176 177 0.601046 TGCAGTTTCGTCAGCTCCAG 60.601 55.000 0.00 0.00 0.00 3.86
177 178 1.294659 GCAGTTTCGTCAGCTCCAGG 61.295 60.000 0.00 0.00 0.00 4.45
178 179 0.318441 CAGTTTCGTCAGCTCCAGGA 59.682 55.000 0.00 0.00 0.00 3.86
179 180 0.605589 AGTTTCGTCAGCTCCAGGAG 59.394 55.000 12.81 12.81 0.00 3.69
189 190 3.192799 CTCCAGGAGCGGAGTTAGA 57.807 57.895 2.60 0.00 46.48 2.10
190 191 1.028905 CTCCAGGAGCGGAGTTAGAG 58.971 60.000 2.60 0.00 46.48 2.43
191 192 0.395862 TCCAGGAGCGGAGTTAGAGG 60.396 60.000 0.00 0.00 0.00 3.69
192 193 0.395862 CCAGGAGCGGAGTTAGAGGA 60.396 60.000 0.00 0.00 0.00 3.71
193 194 1.028905 CAGGAGCGGAGTTAGAGGAG 58.971 60.000 0.00 0.00 0.00 3.69
194 195 0.753848 AGGAGCGGAGTTAGAGGAGC 60.754 60.000 0.00 0.00 0.00 4.70
195 196 1.357334 GAGCGGAGTTAGAGGAGCG 59.643 63.158 0.00 0.00 0.00 5.03
196 197 2.065906 GAGCGGAGTTAGAGGAGCGG 62.066 65.000 0.00 0.00 0.00 5.52
197 198 2.119655 GCGGAGTTAGAGGAGCGGA 61.120 63.158 0.00 0.00 0.00 5.54
198 199 2.026522 CGGAGTTAGAGGAGCGGAG 58.973 63.158 0.00 0.00 0.00 4.63
199 200 0.464013 CGGAGTTAGAGGAGCGGAGA 60.464 60.000 0.00 0.00 0.00 3.71
200 201 1.314730 GGAGTTAGAGGAGCGGAGAG 58.685 60.000 0.00 0.00 0.00 3.20
201 202 1.314730 GAGTTAGAGGAGCGGAGAGG 58.685 60.000 0.00 0.00 0.00 3.69
202 203 0.920438 AGTTAGAGGAGCGGAGAGGA 59.080 55.000 0.00 0.00 0.00 3.71
203 204 1.285373 AGTTAGAGGAGCGGAGAGGAA 59.715 52.381 0.00 0.00 0.00 3.36
204 205 1.406180 GTTAGAGGAGCGGAGAGGAAC 59.594 57.143 0.00 0.00 0.00 3.62
205 206 0.106619 TAGAGGAGCGGAGAGGAACC 60.107 60.000 0.00 0.00 0.00 3.62
213 214 3.816580 GGAGAGGAACCGAACACTC 57.183 57.895 0.00 0.00 0.00 3.51
214 215 0.246910 GGAGAGGAACCGAACACTCC 59.753 60.000 0.00 0.00 37.37 3.85
215 216 0.246910 GAGAGGAACCGAACACTCCC 59.753 60.000 0.00 0.00 0.00 4.30
216 217 0.178929 AGAGGAACCGAACACTCCCT 60.179 55.000 0.00 0.00 0.00 4.20
217 218 1.076677 AGAGGAACCGAACACTCCCTA 59.923 52.381 0.00 0.00 0.00 3.53
218 219 1.897802 GAGGAACCGAACACTCCCTAA 59.102 52.381 0.00 0.00 0.00 2.69
219 220 1.900486 AGGAACCGAACACTCCCTAAG 59.100 52.381 0.00 0.00 0.00 2.18
220 221 1.675116 GGAACCGAACACTCCCTAAGC 60.675 57.143 0.00 0.00 0.00 3.09
221 222 1.001633 GAACCGAACACTCCCTAAGCA 59.998 52.381 0.00 0.00 0.00 3.91
222 223 1.276622 ACCGAACACTCCCTAAGCAT 58.723 50.000 0.00 0.00 0.00 3.79
223 224 2.463752 ACCGAACACTCCCTAAGCATA 58.536 47.619 0.00 0.00 0.00 3.14
224 225 2.431057 ACCGAACACTCCCTAAGCATAG 59.569 50.000 0.00 0.00 0.00 2.23
225 226 2.693591 CCGAACACTCCCTAAGCATAGA 59.306 50.000 0.00 0.00 0.00 1.98
226 227 3.243569 CCGAACACTCCCTAAGCATAGAG 60.244 52.174 0.00 0.00 0.00 2.43
227 228 3.632604 CGAACACTCCCTAAGCATAGAGA 59.367 47.826 0.00 0.00 0.00 3.10
228 229 4.098044 CGAACACTCCCTAAGCATAGAGAA 59.902 45.833 0.00 0.00 0.00 2.87
229 230 5.596845 GAACACTCCCTAAGCATAGAGAAG 58.403 45.833 0.00 0.00 0.00 2.85
230 231 3.964031 ACACTCCCTAAGCATAGAGAAGG 59.036 47.826 0.00 0.00 0.00 3.46
231 232 4.219115 CACTCCCTAAGCATAGAGAAGGA 58.781 47.826 0.00 0.00 0.00 3.36
232 233 4.038642 CACTCCCTAAGCATAGAGAAGGAC 59.961 50.000 0.00 0.00 0.00 3.85
233 234 4.219115 CTCCCTAAGCATAGAGAAGGACA 58.781 47.826 0.00 0.00 0.00 4.02
234 235 4.820775 TCCCTAAGCATAGAGAAGGACAT 58.179 43.478 0.00 0.00 0.00 3.06
235 236 5.219739 TCCCTAAGCATAGAGAAGGACATT 58.780 41.667 0.00 0.00 0.00 2.71
236 237 6.382087 TCCCTAAGCATAGAGAAGGACATTA 58.618 40.000 0.00 0.00 0.00 1.90
237 238 6.844388 TCCCTAAGCATAGAGAAGGACATTAA 59.156 38.462 0.00 0.00 0.00 1.40
238 239 7.347222 TCCCTAAGCATAGAGAAGGACATTAAA 59.653 37.037 0.00 0.00 0.00 1.52
239 240 7.993183 CCCTAAGCATAGAGAAGGACATTAAAA 59.007 37.037 0.00 0.00 0.00 1.52
240 241 9.396022 CCTAAGCATAGAGAAGGACATTAAAAA 57.604 33.333 0.00 0.00 0.00 1.94
243 244 9.692325 AAGCATAGAGAAGGACATTAAAAATCT 57.308 29.630 0.00 0.00 0.00 2.40
244 245 9.336171 AGCATAGAGAAGGACATTAAAAATCTC 57.664 33.333 0.00 0.00 33.69 2.75
245 246 9.113838 GCATAGAGAAGGACATTAAAAATCTCA 57.886 33.333 0.00 0.00 35.45 3.27
249 250 9.171877 AGAGAAGGACATTAAAAATCTCATGAC 57.828 33.333 0.00 0.00 35.45 3.06
250 251 8.868522 AGAAGGACATTAAAAATCTCATGACA 57.131 30.769 0.00 0.00 0.00 3.58
251 252 9.300681 AGAAGGACATTAAAAATCTCATGACAA 57.699 29.630 0.00 0.00 0.00 3.18
252 253 9.346725 GAAGGACATTAAAAATCTCATGACAAC 57.653 33.333 0.00 0.00 0.00 3.32
253 254 7.530010 AGGACATTAAAAATCTCATGACAACG 58.470 34.615 0.00 0.00 0.00 4.10
254 255 7.174946 AGGACATTAAAAATCTCATGACAACGT 59.825 33.333 0.00 0.00 0.00 3.99
255 256 7.807907 GGACATTAAAAATCTCATGACAACGTT 59.192 33.333 0.00 0.00 0.00 3.99
256 257 8.728088 ACATTAAAAATCTCATGACAACGTTC 57.272 30.769 0.00 0.00 0.00 3.95
257 258 8.567948 ACATTAAAAATCTCATGACAACGTTCT 58.432 29.630 0.00 0.00 0.00 3.01
261 262 6.668541 AAATCTCATGACAACGTTCTATGG 57.331 37.500 0.00 0.00 0.00 2.74
262 263 4.801330 TCTCATGACAACGTTCTATGGT 57.199 40.909 0.00 0.00 0.00 3.55
263 264 5.147330 TCTCATGACAACGTTCTATGGTT 57.853 39.130 0.00 0.00 0.00 3.67
264 265 5.547465 TCTCATGACAACGTTCTATGGTTT 58.453 37.500 0.00 0.00 0.00 3.27
265 266 5.408299 TCTCATGACAACGTTCTATGGTTTG 59.592 40.000 0.00 0.00 0.00 2.93
266 267 5.301555 TCATGACAACGTTCTATGGTTTGA 58.698 37.500 0.00 0.00 0.00 2.69
267 268 5.937540 TCATGACAACGTTCTATGGTTTGAT 59.062 36.000 0.00 0.00 0.00 2.57
268 269 7.100409 TCATGACAACGTTCTATGGTTTGATA 58.900 34.615 0.00 0.00 0.00 2.15
269 270 7.768582 TCATGACAACGTTCTATGGTTTGATAT 59.231 33.333 0.00 0.00 0.00 1.63
270 271 7.534085 TGACAACGTTCTATGGTTTGATATC 57.466 36.000 0.00 0.00 0.00 1.63
271 272 7.100409 TGACAACGTTCTATGGTTTGATATCA 58.900 34.615 0.00 0.00 0.00 2.15
272 273 7.064134 TGACAACGTTCTATGGTTTGATATCAC 59.936 37.037 4.48 0.00 0.00 3.06
273 274 6.035650 ACAACGTTCTATGGTTTGATATCACG 59.964 38.462 4.48 4.30 0.00 4.35
274 275 5.047847 ACGTTCTATGGTTTGATATCACGG 58.952 41.667 4.48 0.00 0.00 4.94
275 276 5.047847 CGTTCTATGGTTTGATATCACGGT 58.952 41.667 4.48 0.00 0.00 4.83
276 277 5.051039 CGTTCTATGGTTTGATATCACGGTG 60.051 44.000 4.48 0.56 0.00 4.94
277 278 4.956085 TCTATGGTTTGATATCACGGTGG 58.044 43.478 4.48 0.00 0.00 4.61
278 279 1.745232 TGGTTTGATATCACGGTGGC 58.255 50.000 4.48 0.00 0.00 5.01
279 280 0.655733 GGTTTGATATCACGGTGGCG 59.344 55.000 4.48 0.00 0.00 5.69
280 281 0.655733 GTTTGATATCACGGTGGCGG 59.344 55.000 4.48 0.00 0.00 6.13
281 282 1.092921 TTTGATATCACGGTGGCGGC 61.093 55.000 4.48 0.00 0.00 6.53
282 283 1.966901 TTGATATCACGGTGGCGGCT 61.967 55.000 11.43 0.00 0.00 5.52
283 284 1.227556 GATATCACGGTGGCGGCTT 60.228 57.895 11.43 0.00 0.00 4.35
284 285 1.222115 GATATCACGGTGGCGGCTTC 61.222 60.000 11.43 3.19 0.00 3.86
285 286 1.686325 ATATCACGGTGGCGGCTTCT 61.686 55.000 11.43 0.00 0.00 2.85
286 287 2.572095 TATCACGGTGGCGGCTTCTG 62.572 60.000 11.43 11.00 0.00 3.02
290 291 4.329545 GGTGGCGGCTTCTGGTGA 62.330 66.667 11.43 0.00 0.00 4.02
291 292 2.281484 GTGGCGGCTTCTGGTGAA 60.281 61.111 11.43 0.00 0.00 3.18
292 293 1.675641 GTGGCGGCTTCTGGTGAAT 60.676 57.895 11.43 0.00 0.00 2.57
293 294 0.392461 GTGGCGGCTTCTGGTGAATA 60.392 55.000 11.43 0.00 0.00 1.75
294 295 0.326595 TGGCGGCTTCTGGTGAATAA 59.673 50.000 11.43 0.00 0.00 1.40
295 296 0.733150 GGCGGCTTCTGGTGAATAAC 59.267 55.000 0.00 0.00 0.00 1.89
296 297 1.448985 GCGGCTTCTGGTGAATAACA 58.551 50.000 0.00 0.00 0.00 2.41
297 298 1.398390 GCGGCTTCTGGTGAATAACAG 59.602 52.381 0.00 0.00 36.07 3.16
298 299 2.935238 GCGGCTTCTGGTGAATAACAGA 60.935 50.000 0.00 0.00 41.63 3.41
299 300 2.673368 CGGCTTCTGGTGAATAACAGAC 59.327 50.000 0.00 0.00 42.91 3.51
300 301 3.674997 GGCTTCTGGTGAATAACAGACA 58.325 45.455 0.00 0.00 42.91 3.41
301 302 3.437049 GGCTTCTGGTGAATAACAGACAC 59.563 47.826 0.00 0.00 42.91 3.67
302 303 4.319177 GCTTCTGGTGAATAACAGACACT 58.681 43.478 0.00 0.00 42.91 3.55
303 304 4.390297 GCTTCTGGTGAATAACAGACACTC 59.610 45.833 0.00 0.00 42.91 3.51
304 305 5.541845 CTTCTGGTGAATAACAGACACTCA 58.458 41.667 0.00 0.00 42.91 3.41
305 306 5.139435 TCTGGTGAATAACAGACACTCAG 57.861 43.478 0.00 0.00 38.71 3.35
306 307 4.832823 TCTGGTGAATAACAGACACTCAGA 59.167 41.667 0.00 0.00 38.71 3.27
307 308 4.883083 TGGTGAATAACAGACACTCAGAC 58.117 43.478 0.00 0.00 35.28 3.51
308 309 4.343814 TGGTGAATAACAGACACTCAGACA 59.656 41.667 0.00 0.00 35.28 3.41
309 310 4.926238 GGTGAATAACAGACACTCAGACAG 59.074 45.833 0.00 0.00 35.28 3.51
310 311 5.279006 GGTGAATAACAGACACTCAGACAGA 60.279 44.000 0.00 0.00 35.28 3.41
311 312 6.216569 GTGAATAACAGACACTCAGACAGAA 58.783 40.000 0.00 0.00 0.00 3.02
312 313 6.870965 GTGAATAACAGACACTCAGACAGAAT 59.129 38.462 0.00 0.00 0.00 2.40
313 314 8.029522 GTGAATAACAGACACTCAGACAGAATA 58.970 37.037 0.00 0.00 0.00 1.75
314 315 8.029522 TGAATAACAGACACTCAGACAGAATAC 58.970 37.037 0.00 0.00 0.00 1.89
315 316 7.710676 ATAACAGACACTCAGACAGAATACT 57.289 36.000 0.00 0.00 0.00 2.12
316 317 8.809468 ATAACAGACACTCAGACAGAATACTA 57.191 34.615 0.00 0.00 0.00 1.82
317 318 6.751514 ACAGACACTCAGACAGAATACTAG 57.248 41.667 0.00 0.00 0.00 2.57
318 319 5.650266 ACAGACACTCAGACAGAATACTAGG 59.350 44.000 0.00 0.00 0.00 3.02
319 320 5.067153 CAGACACTCAGACAGAATACTAGGG 59.933 48.000 0.00 0.00 0.00 3.53
320 321 3.702045 ACACTCAGACAGAATACTAGGGC 59.298 47.826 0.00 0.00 0.00 5.19
321 322 3.068873 CACTCAGACAGAATACTAGGGCC 59.931 52.174 0.00 0.00 0.00 5.80
322 323 3.300388 CTCAGACAGAATACTAGGGCCA 58.700 50.000 6.18 0.00 0.00 5.36
323 324 3.900601 CTCAGACAGAATACTAGGGCCAT 59.099 47.826 6.18 0.00 0.00 4.40
324 325 3.643320 TCAGACAGAATACTAGGGCCATG 59.357 47.826 6.18 0.00 0.00 3.66
325 326 2.370189 AGACAGAATACTAGGGCCATGC 59.630 50.000 6.18 0.00 0.00 4.06
326 327 2.370189 GACAGAATACTAGGGCCATGCT 59.630 50.000 6.18 0.00 0.00 3.79
327 328 3.578716 GACAGAATACTAGGGCCATGCTA 59.421 47.826 6.18 0.00 0.00 3.49
328 329 3.325135 ACAGAATACTAGGGCCATGCTAC 59.675 47.826 6.18 0.00 0.00 3.58
329 330 3.324846 CAGAATACTAGGGCCATGCTACA 59.675 47.826 6.18 0.00 0.00 2.74
330 331 3.580458 AGAATACTAGGGCCATGCTACAG 59.420 47.826 6.18 0.00 0.00 2.74
331 332 2.767644 TACTAGGGCCATGCTACAGA 57.232 50.000 6.18 0.00 0.00 3.41
332 333 1.418334 ACTAGGGCCATGCTACAGAG 58.582 55.000 6.18 0.00 0.00 3.35
333 334 1.062886 ACTAGGGCCATGCTACAGAGA 60.063 52.381 6.18 0.00 0.00 3.10
334 335 2.042464 CTAGGGCCATGCTACAGAGAA 58.958 52.381 6.18 0.00 0.00 2.87
335 336 1.289160 AGGGCCATGCTACAGAGAAA 58.711 50.000 6.18 0.00 0.00 2.52
336 337 1.211457 AGGGCCATGCTACAGAGAAAG 59.789 52.381 6.18 0.00 0.00 2.62
337 338 1.210478 GGGCCATGCTACAGAGAAAGA 59.790 52.381 4.39 0.00 0.00 2.52
338 339 2.559440 GGCCATGCTACAGAGAAAGAG 58.441 52.381 0.00 0.00 0.00 2.85
339 340 1.939255 GCCATGCTACAGAGAAAGAGC 59.061 52.381 0.00 0.00 35.43 4.09
340 341 2.419851 GCCATGCTACAGAGAAAGAGCT 60.420 50.000 0.00 0.00 35.89 4.09
341 342 3.871485 CCATGCTACAGAGAAAGAGCTT 58.129 45.455 0.00 0.00 35.89 3.74
342 343 3.870419 CCATGCTACAGAGAAAGAGCTTC 59.130 47.826 0.00 0.00 35.89 3.86
344 345 4.881019 TGCTACAGAGAAAGAGCTTCTT 57.119 40.909 0.00 0.00 44.82 2.52
346 347 5.615289 TGCTACAGAGAAAGAGCTTCTTTT 58.385 37.500 11.00 2.90 45.85 2.27
347 348 6.058183 TGCTACAGAGAAAGAGCTTCTTTTT 58.942 36.000 11.00 6.90 45.85 1.94
348 349 7.217200 TGCTACAGAGAAAGAGCTTCTTTTTA 58.783 34.615 11.00 0.00 45.85 1.52
349 350 7.171678 TGCTACAGAGAAAGAGCTTCTTTTTAC 59.828 37.037 11.00 7.22 45.85 2.01
350 351 7.171678 GCTACAGAGAAAGAGCTTCTTTTTACA 59.828 37.037 11.00 0.00 45.85 2.41
351 352 7.489574 ACAGAGAAAGAGCTTCTTTTTACAG 57.510 36.000 11.00 6.88 45.85 2.74
352 353 6.484977 ACAGAGAAAGAGCTTCTTTTTACAGG 59.515 38.462 11.00 4.66 45.85 4.00
353 354 6.708054 CAGAGAAAGAGCTTCTTTTTACAGGA 59.292 38.462 11.00 0.00 45.85 3.86
354 355 6.708502 AGAGAAAGAGCTTCTTTTTACAGGAC 59.291 38.462 11.00 0.00 45.85 3.85
355 356 6.596621 AGAAAGAGCTTCTTTTTACAGGACT 58.403 36.000 11.00 1.69 45.85 3.85
356 357 7.736893 AGAAAGAGCTTCTTTTTACAGGACTA 58.263 34.615 11.00 0.00 45.85 2.59
357 358 8.379331 AGAAAGAGCTTCTTTTTACAGGACTAT 58.621 33.333 11.00 0.00 45.85 2.12
358 359 9.654663 GAAAGAGCTTCTTTTTACAGGACTATA 57.345 33.333 11.00 0.00 45.85 1.31
359 360 9.438228 AAAGAGCTTCTTTTTACAGGACTATAC 57.562 33.333 5.61 0.00 43.62 1.47
360 361 7.557724 AGAGCTTCTTTTTACAGGACTATACC 58.442 38.462 0.00 0.00 0.00 2.73
361 362 7.400627 AGAGCTTCTTTTTACAGGACTATACCT 59.599 37.037 0.00 0.00 41.43 3.08
374 375 7.584122 AGGACTATACCTGTGTTATGTGTAG 57.416 40.000 0.00 0.00 39.01 2.74
375 376 6.040616 AGGACTATACCTGTGTTATGTGTAGC 59.959 42.308 0.00 0.00 39.01 3.58
376 377 6.183360 GGACTATACCTGTGTTATGTGTAGCA 60.183 42.308 0.00 0.00 29.76 3.49
377 378 6.806751 ACTATACCTGTGTTATGTGTAGCAG 58.193 40.000 0.00 0.00 29.76 4.24
378 379 3.334583 ACCTGTGTTATGTGTAGCAGG 57.665 47.619 6.83 6.83 46.32 4.85
379 380 2.009774 CCTGTGTTATGTGTAGCAGGC 58.990 52.381 0.00 0.00 37.32 4.85
380 381 2.615240 CCTGTGTTATGTGTAGCAGGCA 60.615 50.000 0.00 0.00 37.32 4.75
381 382 3.073678 CTGTGTTATGTGTAGCAGGCAA 58.926 45.455 0.00 0.00 0.00 4.52
382 383 3.481453 TGTGTTATGTGTAGCAGGCAAA 58.519 40.909 0.00 0.00 0.00 3.68
383 384 4.078537 TGTGTTATGTGTAGCAGGCAAAT 58.921 39.130 0.00 0.00 0.00 2.32
384 385 4.082841 TGTGTTATGTGTAGCAGGCAAATG 60.083 41.667 0.00 0.00 0.00 2.32
385 386 3.119531 TGTTATGTGTAGCAGGCAAATGC 60.120 43.478 0.00 0.00 46.88 3.56
391 392 3.379880 GCAGGCAAATGCTGGGAA 58.620 55.556 5.25 0.00 43.07 3.97
392 393 1.079612 GCAGGCAAATGCTGGGAAC 60.080 57.895 5.25 0.00 43.07 3.62
393 394 1.818959 GCAGGCAAATGCTGGGAACA 61.819 55.000 5.25 0.00 43.07 3.18
394 395 0.680618 CAGGCAAATGCTGGGAACAA 59.319 50.000 5.25 0.00 42.06 2.83
395 396 0.971386 AGGCAAATGCTGGGAACAAG 59.029 50.000 5.25 0.00 42.06 3.16
396 397 0.968405 GGCAAATGCTGGGAACAAGA 59.032 50.000 5.25 0.00 42.06 3.02
397 398 1.067354 GGCAAATGCTGGGAACAAGAG 60.067 52.381 5.25 0.00 42.06 2.85
398 399 1.888512 GCAAATGCTGGGAACAAGAGA 59.111 47.619 0.00 0.00 42.06 3.10
399 400 2.494870 GCAAATGCTGGGAACAAGAGAT 59.505 45.455 0.00 0.00 42.06 2.75
400 401 3.428589 GCAAATGCTGGGAACAAGAGATC 60.429 47.826 0.00 0.00 42.06 2.75
401 402 3.726557 AATGCTGGGAACAAGAGATCA 57.273 42.857 0.00 0.00 42.06 2.92
402 403 2.479566 TGCTGGGAACAAGAGATCAC 57.520 50.000 0.00 0.00 42.06 3.06
403 404 1.980765 TGCTGGGAACAAGAGATCACT 59.019 47.619 0.00 0.00 42.06 3.41
404 405 2.373169 TGCTGGGAACAAGAGATCACTT 59.627 45.455 0.00 0.00 42.06 3.16
417 418 6.749923 AGAGATCACTTGTTTTTCCTATGC 57.250 37.500 0.00 0.00 0.00 3.14
418 419 5.649831 AGAGATCACTTGTTTTTCCTATGCC 59.350 40.000 0.00 0.00 0.00 4.40
419 420 4.706962 AGATCACTTGTTTTTCCTATGCCC 59.293 41.667 0.00 0.00 0.00 5.36
420 421 3.838565 TCACTTGTTTTTCCTATGCCCA 58.161 40.909 0.00 0.00 0.00 5.36
421 422 4.415596 TCACTTGTTTTTCCTATGCCCAT 58.584 39.130 0.00 0.00 0.00 4.00
422 423 4.837860 TCACTTGTTTTTCCTATGCCCATT 59.162 37.500 0.00 0.00 0.00 3.16
423 424 5.306678 TCACTTGTTTTTCCTATGCCCATTT 59.693 36.000 0.00 0.00 0.00 2.32
424 425 5.409214 CACTTGTTTTTCCTATGCCCATTTG 59.591 40.000 0.00 0.00 0.00 2.32
425 426 3.936564 TGTTTTTCCTATGCCCATTTGC 58.063 40.909 0.00 0.00 0.00 3.68
426 427 3.582208 TGTTTTTCCTATGCCCATTTGCT 59.418 39.130 0.00 0.00 0.00 3.91
427 428 4.774726 TGTTTTTCCTATGCCCATTTGCTA 59.225 37.500 0.00 0.00 0.00 3.49
428 429 5.247110 TGTTTTTCCTATGCCCATTTGCTAA 59.753 36.000 0.00 0.00 0.00 3.09
429 430 6.169800 GTTTTTCCTATGCCCATTTGCTAAA 58.830 36.000 0.00 0.00 0.00 1.85
430 431 6.365970 TTTTCCTATGCCCATTTGCTAAAA 57.634 33.333 0.00 0.00 0.00 1.52
431 432 6.558488 TTTCCTATGCCCATTTGCTAAAAT 57.442 33.333 0.00 0.00 36.39 1.82
440 441 3.327626 CATTTGCTAAAATGTGCTGGCA 58.672 40.909 3.54 0.00 45.11 4.92
441 442 3.465742 TTTGCTAAAATGTGCTGGCAA 57.534 38.095 0.00 0.00 37.80 4.52
442 443 3.681593 TTGCTAAAATGTGCTGGCAAT 57.318 38.095 0.00 0.00 35.26 3.56
443 444 4.797800 TTGCTAAAATGTGCTGGCAATA 57.202 36.364 0.00 0.00 35.26 1.90
444 445 5.341872 TTGCTAAAATGTGCTGGCAATAT 57.658 34.783 0.00 0.00 35.26 1.28
445 446 6.462552 TTGCTAAAATGTGCTGGCAATATA 57.537 33.333 0.00 0.00 35.26 0.86
446 447 6.653526 TGCTAAAATGTGCTGGCAATATAT 57.346 33.333 0.00 0.00 0.00 0.86
447 448 7.053316 TGCTAAAATGTGCTGGCAATATATT 57.947 32.000 0.00 0.00 0.00 1.28
448 449 7.499292 TGCTAAAATGTGCTGGCAATATATTT 58.501 30.769 0.00 0.00 0.00 1.40
449 450 7.438757 TGCTAAAATGTGCTGGCAATATATTTG 59.561 33.333 0.00 0.00 0.00 2.32
450 451 7.439056 GCTAAAATGTGCTGGCAATATATTTGT 59.561 33.333 0.00 2.13 0.00 2.83
451 452 7.775397 AAAATGTGCTGGCAATATATTTGTC 57.225 32.000 0.00 0.00 0.00 3.18
452 453 4.916983 TGTGCTGGCAATATATTTGTCC 57.083 40.909 0.00 0.00 0.00 4.02
453 454 4.535781 TGTGCTGGCAATATATTTGTCCT 58.464 39.130 0.00 0.00 0.00 3.85
454 455 4.580167 TGTGCTGGCAATATATTTGTCCTC 59.420 41.667 0.00 0.00 0.00 3.71
455 456 4.022849 GTGCTGGCAATATATTTGTCCTCC 60.023 45.833 0.00 0.00 0.00 4.30
456 457 4.141181 TGCTGGCAATATATTTGTCCTCCT 60.141 41.667 0.00 0.00 0.00 3.69
457 458 4.829492 GCTGGCAATATATTTGTCCTCCTT 59.171 41.667 0.00 0.00 0.00 3.36
458 459 5.278660 GCTGGCAATATATTTGTCCTCCTTG 60.279 44.000 0.00 0.00 0.00 3.61
459 460 5.139727 TGGCAATATATTTGTCCTCCTTGG 58.860 41.667 0.00 0.00 37.10 3.61
460 461 5.103728 TGGCAATATATTTGTCCTCCTTGGA 60.104 40.000 0.00 0.00 43.86 3.53
468 469 2.992476 TCCTCCTTGGACACTAGCC 58.008 57.895 0.00 0.00 40.56 3.93
469 470 0.617820 TCCTCCTTGGACACTAGCCC 60.618 60.000 0.00 0.00 40.56 5.19
470 471 0.909610 CCTCCTTGGACACTAGCCCA 60.910 60.000 0.00 0.00 38.35 5.36
471 472 0.539051 CTCCTTGGACACTAGCCCAG 59.461 60.000 0.00 0.00 33.43 4.45
472 473 0.178903 TCCTTGGACACTAGCCCAGT 60.179 55.000 0.00 0.00 38.32 4.00
473 474 0.250513 CCTTGGACACTAGCCCAGTC 59.749 60.000 0.00 0.00 34.26 3.51
474 475 0.976641 CTTGGACACTAGCCCAGTCA 59.023 55.000 0.00 0.00 34.26 3.41
475 476 0.976641 TTGGACACTAGCCCAGTCAG 59.023 55.000 0.00 0.00 34.26 3.51
476 477 0.114364 TGGACACTAGCCCAGTCAGA 59.886 55.000 0.00 0.00 34.26 3.27
477 478 1.273267 TGGACACTAGCCCAGTCAGAT 60.273 52.381 0.00 0.00 34.26 2.90
478 479 2.024369 TGGACACTAGCCCAGTCAGATA 60.024 50.000 0.00 0.00 34.26 1.98
479 480 3.235200 GGACACTAGCCCAGTCAGATAT 58.765 50.000 0.00 0.00 34.26 1.63
480 481 3.643792 GGACACTAGCCCAGTCAGATATT 59.356 47.826 0.00 0.00 34.26 1.28
481 482 4.262249 GGACACTAGCCCAGTCAGATATTC 60.262 50.000 0.00 0.00 34.26 1.75
482 483 4.290093 ACACTAGCCCAGTCAGATATTCA 58.710 43.478 0.00 0.00 34.26 2.57
483 484 4.716784 ACACTAGCCCAGTCAGATATTCAA 59.283 41.667 0.00 0.00 34.26 2.69
484 485 5.163364 ACACTAGCCCAGTCAGATATTCAAG 60.163 44.000 0.00 0.00 34.26 3.02
485 486 5.069648 CACTAGCCCAGTCAGATATTCAAGA 59.930 44.000 0.00 0.00 34.26 3.02
486 487 4.686191 AGCCCAGTCAGATATTCAAGAG 57.314 45.455 0.00 0.00 0.00 2.85
487 488 3.390639 AGCCCAGTCAGATATTCAAGAGG 59.609 47.826 0.00 0.00 0.00 3.69
488 489 3.389329 GCCCAGTCAGATATTCAAGAGGA 59.611 47.826 0.00 0.00 0.00 3.71
489 490 4.141620 GCCCAGTCAGATATTCAAGAGGAA 60.142 45.833 0.00 0.00 40.46 3.36
490 491 5.609423 CCCAGTCAGATATTCAAGAGGAAG 58.391 45.833 0.00 0.00 39.30 3.46
491 492 5.130145 CCCAGTCAGATATTCAAGAGGAAGT 59.870 44.000 0.00 0.00 39.30 3.01
492 493 6.352565 CCCAGTCAGATATTCAAGAGGAAGTT 60.353 42.308 0.00 0.00 39.30 2.66
493 494 6.538021 CCAGTCAGATATTCAAGAGGAAGTTG 59.462 42.308 0.00 0.00 39.30 3.16
494 495 7.326454 CAGTCAGATATTCAAGAGGAAGTTGA 58.674 38.462 0.00 0.00 39.30 3.18
495 496 7.492020 CAGTCAGATATTCAAGAGGAAGTTGAG 59.508 40.741 0.00 0.00 39.30 3.02
496 497 7.398618 AGTCAGATATTCAAGAGGAAGTTGAGA 59.601 37.037 0.00 0.00 39.30 3.27
497 498 8.037758 GTCAGATATTCAAGAGGAAGTTGAGAA 58.962 37.037 0.00 0.00 39.30 2.87
498 499 8.597167 TCAGATATTCAAGAGGAAGTTGAGAAA 58.403 33.333 0.00 0.00 39.30 2.52
512 513 9.959749 GGAAGTTGAGAAATGTTAAACACAATA 57.040 29.630 0.00 0.00 39.50 1.90
535 538 2.121009 CATTGTGTCACGTACGTCACA 58.879 47.619 28.73 28.73 38.71 3.58
546 550 2.880268 CGTACGTCACATATGGAGGGTA 59.120 50.000 7.22 1.68 0.00 3.69
565 569 1.079543 CCAGACTTGGCGTGAGGAG 60.080 63.158 0.00 0.00 37.73 3.69
586 590 6.014012 GGAGCTAGGATAGATAGTTGGTTCT 58.986 44.000 0.00 0.00 37.50 3.01
647 671 5.186021 TGTTCTCCAAGTTGTATCTCTCCTC 59.814 44.000 1.45 0.00 0.00 3.71
674 698 3.081061 TCTCCAACAATGTATGCGCTTT 58.919 40.909 9.73 0.00 0.00 3.51
683 707 1.153168 TATGCGCTTTCAGGGAGGC 60.153 57.895 9.73 0.00 0.00 4.70
700 724 2.665185 CGCGCCCCTGCCTATAAC 60.665 66.667 0.00 0.00 0.00 1.89
701 725 2.508928 GCGCCCCTGCCTATAACA 59.491 61.111 0.00 0.00 0.00 2.41
702 726 1.892391 GCGCCCCTGCCTATAACAC 60.892 63.158 0.00 0.00 0.00 3.32
704 728 0.814010 CGCCCCTGCCTATAACACAC 60.814 60.000 0.00 0.00 0.00 3.82
714 739 3.311106 CCTATAACACACAACACGTCGT 58.689 45.455 0.00 0.00 0.00 4.34
722 747 0.458669 ACAACACGTCGTCTCAGGTT 59.541 50.000 0.00 0.00 0.00 3.50
746 771 3.131577 AGGTAAGACGTTTCCGCATATCA 59.868 43.478 0.00 0.00 37.70 2.15
758 783 4.713553 TCCGCATATCACACATGGTAATT 58.286 39.130 0.00 0.00 0.00 1.40
802 827 6.352516 CCTAGCTTTTGATCTCCATTAGTGT 58.647 40.000 0.00 0.00 0.00 3.55
910 935 2.027625 ACTCAAGTTACGCCGCAGC 61.028 57.895 0.00 0.00 0.00 5.25
929 954 1.229209 TGAGGGGAGCCGAGTTCTT 60.229 57.895 0.00 0.00 0.00 2.52
930 955 1.258445 TGAGGGGAGCCGAGTTCTTC 61.258 60.000 0.00 0.00 0.00 2.87
947 972 0.107897 TTCGGCTATGTTGACGGCAT 60.108 50.000 0.00 0.00 39.26 4.40
991 1016 0.105964 CGTCACCAAGGACAAGGACA 59.894 55.000 0.00 0.00 37.66 4.02
992 1017 1.270839 CGTCACCAAGGACAAGGACAT 60.271 52.381 0.00 0.00 37.66 3.06
999 1024 3.498481 CCAAGGACAAGGACATGAAGGAA 60.498 47.826 0.00 0.00 0.00 3.36
1071 1096 2.092914 GGTGCTTGGCTACCTACTCAAT 60.093 50.000 0.00 0.00 34.11 2.57
1078 1103 4.880164 TGGCTACCTACTCAATAACCTCT 58.120 43.478 0.00 0.00 0.00 3.69
1079 1104 5.278061 TGGCTACCTACTCAATAACCTCTT 58.722 41.667 0.00 0.00 0.00 2.85
1096 1121 1.686587 TCTTCAAAGAGGTGCTCGTCA 59.313 47.619 10.72 0.00 35.36 4.35
1103 1128 2.214181 GAGGTGCTCGTCACGGTGAT 62.214 60.000 14.78 0.00 46.56 3.06
1193 1220 1.528076 AACAACATCCGCACTGCCA 60.528 52.632 0.00 0.00 0.00 4.92
1205 1232 1.068588 GCACTGCCATGATCAATGCAT 59.931 47.619 19.18 0.00 36.76 3.96
1210 1237 4.519350 ACTGCCATGATCAATGCATAGAAG 59.481 41.667 19.18 11.71 34.67 2.85
1257 1284 1.003355 CCTCCATGCGTGGTCTTGT 60.003 57.895 24.24 0.00 46.16 3.16
1258 1285 1.021390 CCTCCATGCGTGGTCTTGTC 61.021 60.000 24.24 0.00 46.16 3.18
1264 1291 0.032815 TGCGTGGTCTTGTCGATGAA 59.967 50.000 0.00 0.00 0.00 2.57
1314 1341 4.520874 GGATGACGAACTGATCTCCTATCA 59.479 45.833 0.00 0.00 0.00 2.15
1340 1367 1.144057 GGGCTGGACATGGACTACG 59.856 63.158 0.00 0.00 0.00 3.51
1342 1369 0.753262 GGCTGGACATGGACTACGAT 59.247 55.000 0.00 0.00 0.00 3.73
1345 1372 1.341531 CTGGACATGGACTACGATCCC 59.658 57.143 0.00 0.00 38.06 3.85
1360 1387 3.787001 CCCCTTGTCTCCGCCCTC 61.787 72.222 0.00 0.00 0.00 4.30
1390 1417 3.063084 ACGCTGGTCTCCCTCGAC 61.063 66.667 0.00 0.00 33.60 4.20
1418 1445 0.592637 CGCCATGTTGAGCAACTTCA 59.407 50.000 13.80 0.00 41.67 3.02
1430 1457 1.264020 GCAACTTCAATCAGCGTGTCA 59.736 47.619 0.00 0.00 0.00 3.58
1463 1491 3.599285 CTGGCGGCGGGTTCAAGTA 62.599 63.158 10.55 0.00 0.00 2.24
1466 1494 1.310216 GGCGGCGGGTTCAAGTATTT 61.310 55.000 9.78 0.00 0.00 1.40
1479 1507 2.096782 TATTTTGCGAACGCGGCG 59.903 55.556 22.36 22.36 45.51 6.46
1506 1534 2.754658 CGCGGTGGGTACTCCTCT 60.755 66.667 0.00 0.00 36.20 3.69
1507 1535 2.348888 CGCGGTGGGTACTCCTCTT 61.349 63.158 0.00 0.00 36.20 2.85
1542 1570 1.152860 TCGTTCCAAGGGCAAGCAA 60.153 52.632 0.00 0.00 0.00 3.91
1543 1571 1.172180 TCGTTCCAAGGGCAAGCAAG 61.172 55.000 0.00 0.00 0.00 4.01
1545 1573 1.115326 GTTCCAAGGGCAAGCAAGGT 61.115 55.000 0.00 0.00 0.00 3.50
1546 1574 1.114722 TTCCAAGGGCAAGCAAGGTG 61.115 55.000 0.00 0.00 0.00 4.00
1557 1585 2.906897 CAAGGTGGCGGCAACACT 60.907 61.111 30.03 17.30 38.83 3.55
1559 1587 1.302511 AAGGTGGCGGCAACACTAG 60.303 57.895 30.03 0.00 38.83 2.57
1564 1592 2.561373 GCGGCAACACTAGCAACC 59.439 61.111 0.00 0.00 0.00 3.77
1567 1595 1.228429 GGCAACACTAGCAACCCCA 60.228 57.895 0.00 0.00 0.00 4.96
1597 1625 4.530857 GACGCCCCATCTCCACCG 62.531 72.222 0.00 0.00 0.00 4.94
1634 1668 2.885113 CGACTCGGGCAGATCACA 59.115 61.111 0.00 0.00 0.00 3.58
1663 1698 1.742880 GTTCGCTGCCAGATCTGCA 60.743 57.895 17.76 16.62 37.17 4.41
1683 1718 1.133513 AGGAAACCTGGACACATTGCA 60.134 47.619 0.00 0.00 29.57 4.08
1714 1749 4.811024 GCTGGTATCATTTCGATGAAGACA 59.189 41.667 0.00 0.00 35.39 3.41
1724 1759 4.736126 TCGATGAAGACAATGCCTCTTA 57.264 40.909 0.00 0.00 0.00 2.10
1732 1767 7.114754 TGAAGACAATGCCTCTTATGAAGATT 58.885 34.615 0.00 0.00 36.82 2.40
1737 1772 9.228949 GACAATGCCTCTTATGAAGATTATGAT 57.771 33.333 0.00 0.00 36.82 2.45
1781 1816 1.244816 TCCTATGGCGTCGATACCAG 58.755 55.000 13.90 3.05 39.88 4.00
1809 1844 3.627218 GATAGCGGCGCGACCAAC 61.627 66.667 27.59 12.01 39.03 3.77
1819 1854 2.420043 CGACCAACCACCTCACGT 59.580 61.111 0.00 0.00 0.00 4.49
1827 1862 2.743718 CACCTCACGTGGGAGCTT 59.256 61.111 19.37 0.00 38.96 3.74
1836 1871 0.895530 CGTGGGAGCTTGAGAAGGTA 59.104 55.000 0.00 0.00 39.77 3.08
1838 1873 2.289444 CGTGGGAGCTTGAGAAGGTAAA 60.289 50.000 0.00 0.00 39.77 2.01
1839 1874 3.339141 GTGGGAGCTTGAGAAGGTAAAG 58.661 50.000 0.00 0.00 39.77 1.85
1866 1901 2.623889 CGAGAAGTATCACGGGAAGGAT 59.376 50.000 0.00 0.00 36.22 3.24
1878 1913 2.169352 CGGGAAGGATCAGATTCACACT 59.831 50.000 0.00 0.00 0.00 3.55
1905 1940 3.317149 GTGGTGTAGGTATGAGCATACGA 59.683 47.826 12.90 3.05 43.43 3.43
1908 1943 4.022242 GGTGTAGGTATGAGCATACGACAT 60.022 45.833 20.39 9.30 43.43 3.06
1909 1944 4.917998 GTGTAGGTATGAGCATACGACATG 59.082 45.833 20.39 0.00 43.43 3.21
1926 1961 4.094294 CGACATGTTGGTCATTCGGTTATT 59.906 41.667 5.04 0.00 37.66 1.40
1956 1991 5.810587 CCCTTCTCGTAAAATTCATCTTCGA 59.189 40.000 0.00 0.00 0.00 3.71
1999 2035 5.010012 AGTGCCAACAAAAATCTTCTACCAG 59.990 40.000 0.00 0.00 0.00 4.00
2005 2041 7.040478 CCAACAAAAATCTTCTACCAGTCATCA 60.040 37.037 0.00 0.00 0.00 3.07
2021 2057 6.317088 CAGTCATCACATTACCATTGACAAC 58.683 40.000 0.00 0.00 36.74 3.32
2027 2063 5.538053 TCACATTACCATTGACAACCATGTT 59.462 36.000 0.00 0.00 40.74 2.71
2030 2066 6.928492 ACATTACCATTGACAACCATGTTTTC 59.072 34.615 0.00 0.00 40.74 2.29
2036 2072 6.146510 CCATTGACAACCATGTTTTCATTGAG 59.853 38.462 14.64 6.15 40.74 3.02
2119 2157 1.079336 GCGTTCGAGGGCTTTACCT 60.079 57.895 2.85 0.00 45.57 3.08
2138 2176 2.168521 CCTGTTGATTCCGGAGCTTAGA 59.831 50.000 3.34 0.00 0.00 2.10
2166 2204 6.909550 TCAATAAACAAGCCTATGGTGTTT 57.090 33.333 6.30 6.30 36.74 2.83
2172 2210 5.806654 ACAAGCCTATGGTGTTTTCAAAT 57.193 34.783 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.068103 TGAGCTTTCTTTACATCAGGAAAAACA 59.932 33.333 0.00 0.00 0.00 2.83
2 3 7.425606 TGAGCTTTCTTTACATCAGGAAAAAC 58.574 34.615 0.00 0.00 0.00 2.43
4 5 7.285401 AGTTGAGCTTTCTTTACATCAGGAAAA 59.715 33.333 0.00 0.00 0.00 2.29
5 6 6.772716 AGTTGAGCTTTCTTTACATCAGGAAA 59.227 34.615 0.00 0.00 0.00 3.13
7 8 5.869579 AGTTGAGCTTTCTTTACATCAGGA 58.130 37.500 0.00 0.00 0.00 3.86
8 9 7.301068 CTAGTTGAGCTTTCTTTACATCAGG 57.699 40.000 0.00 0.00 0.00 3.86
24 25 1.886542 GGGGTTGTTTGGCTAGTTGAG 59.113 52.381 0.00 0.00 0.00 3.02
25 26 1.816183 CGGGGTTGTTTGGCTAGTTGA 60.816 52.381 0.00 0.00 0.00 3.18
26 27 0.596082 CGGGGTTGTTTGGCTAGTTG 59.404 55.000 0.00 0.00 0.00 3.16
27 28 0.184211 ACGGGGTTGTTTGGCTAGTT 59.816 50.000 0.00 0.00 0.00 2.24
28 29 0.536460 CACGGGGTTGTTTGGCTAGT 60.536 55.000 0.00 0.00 0.00 2.57
29 30 1.241315 CCACGGGGTTGTTTGGCTAG 61.241 60.000 0.00 0.00 0.00 3.42
30 31 1.228306 CCACGGGGTTGTTTGGCTA 60.228 57.895 0.00 0.00 0.00 3.93
31 32 2.520741 CCACGGGGTTGTTTGGCT 60.521 61.111 0.00 0.00 0.00 4.75
32 33 3.611674 CCCACGGGGTTGTTTGGC 61.612 66.667 1.28 0.00 38.25 4.52
33 34 0.830023 AATCCCACGGGGTTGTTTGG 60.830 55.000 1.28 0.00 44.74 3.28
34 35 1.044611 AAATCCCACGGGGTTGTTTG 58.955 50.000 1.28 0.00 44.74 2.93
35 36 1.044611 CAAATCCCACGGGGTTGTTT 58.955 50.000 1.28 0.00 44.74 2.83
36 37 0.186386 TCAAATCCCACGGGGTTGTT 59.814 50.000 1.28 0.00 44.74 2.83
37 38 0.251165 CTCAAATCCCACGGGGTTGT 60.251 55.000 1.28 0.00 44.74 3.32
38 39 0.965363 CCTCAAATCCCACGGGGTTG 60.965 60.000 1.28 7.20 44.74 3.77
39 40 1.382629 CCTCAAATCCCACGGGGTT 59.617 57.895 1.28 0.00 44.74 4.11
40 41 2.612493 CCCTCAAATCCCACGGGGT 61.612 63.158 1.28 0.00 44.74 4.95
41 42 1.858739 TTCCCTCAAATCCCACGGGG 61.859 60.000 0.00 0.00 46.11 5.73
42 43 0.679960 GTTCCCTCAAATCCCACGGG 60.680 60.000 0.00 0.00 36.21 5.28
43 44 0.037590 TGTTCCCTCAAATCCCACGG 59.962 55.000 0.00 0.00 0.00 4.94
44 45 2.128771 ATGTTCCCTCAAATCCCACG 57.871 50.000 0.00 0.00 0.00 4.94
45 46 4.536765 ACATATGTTCCCTCAAATCCCAC 58.463 43.478 1.41 0.00 0.00 4.61
46 47 4.879295 ACATATGTTCCCTCAAATCCCA 57.121 40.909 1.41 0.00 0.00 4.37
47 48 5.163416 CCAAACATATGTTCCCTCAAATCCC 60.163 44.000 21.02 0.00 37.25 3.85
48 49 5.682212 GCCAAACATATGTTCCCTCAAATCC 60.682 44.000 21.02 0.00 37.25 3.01
49 50 5.105392 TGCCAAACATATGTTCCCTCAAATC 60.105 40.000 21.02 4.83 37.25 2.17
50 51 4.776837 TGCCAAACATATGTTCCCTCAAAT 59.223 37.500 21.02 0.47 37.25 2.32
51 52 4.155709 TGCCAAACATATGTTCCCTCAAA 58.844 39.130 21.02 2.02 37.25 2.69
52 53 3.772387 TGCCAAACATATGTTCCCTCAA 58.228 40.909 21.02 3.49 37.25 3.02
53 54 3.448093 TGCCAAACATATGTTCCCTCA 57.552 42.857 21.02 13.35 37.25 3.86
54 55 4.799564 TTTGCCAAACATATGTTCCCTC 57.200 40.909 21.02 11.19 37.25 4.30
55 56 4.346418 TGTTTTGCCAAACATATGTTCCCT 59.654 37.500 21.02 3.48 46.06 4.20
56 57 4.636249 TGTTTTGCCAAACATATGTTCCC 58.364 39.130 21.02 12.49 46.06 3.97
66 67 4.242475 GGCCTTAGTATGTTTTGCCAAAC 58.758 43.478 6.46 6.46 42.49 2.93
67 68 3.259625 GGGCCTTAGTATGTTTTGCCAAA 59.740 43.478 0.84 0.00 39.15 3.28
68 69 2.829120 GGGCCTTAGTATGTTTTGCCAA 59.171 45.455 0.84 0.00 39.15 4.52
69 70 2.042433 AGGGCCTTAGTATGTTTTGCCA 59.958 45.455 0.00 0.00 39.15 4.92
70 71 2.427095 CAGGGCCTTAGTATGTTTTGCC 59.573 50.000 1.32 0.00 36.68 4.52
71 72 3.089284 ACAGGGCCTTAGTATGTTTTGC 58.911 45.455 1.32 0.00 0.00 3.68
72 73 4.142687 CGAACAGGGCCTTAGTATGTTTTG 60.143 45.833 1.32 0.00 34.41 2.44
73 74 4.007659 CGAACAGGGCCTTAGTATGTTTT 58.992 43.478 1.32 0.00 34.41 2.43
74 75 3.606687 CGAACAGGGCCTTAGTATGTTT 58.393 45.455 1.32 0.00 34.41 2.83
75 76 2.093128 CCGAACAGGGCCTTAGTATGTT 60.093 50.000 1.32 4.48 36.83 2.71
76 77 1.485066 CCGAACAGGGCCTTAGTATGT 59.515 52.381 1.32 0.00 35.97 2.29
77 78 1.760613 TCCGAACAGGGCCTTAGTATG 59.239 52.381 1.32 0.00 41.52 2.39
78 79 2.170012 TCCGAACAGGGCCTTAGTAT 57.830 50.000 1.32 0.00 41.52 2.12
79 80 1.941377 TTCCGAACAGGGCCTTAGTA 58.059 50.000 1.32 0.00 41.52 1.82
80 81 1.209747 GATTCCGAACAGGGCCTTAGT 59.790 52.381 1.32 0.00 41.52 2.24
81 82 1.486726 AGATTCCGAACAGGGCCTTAG 59.513 52.381 1.32 0.00 41.52 2.18
82 83 1.580059 AGATTCCGAACAGGGCCTTA 58.420 50.000 1.32 0.00 41.52 2.69
83 84 1.580059 TAGATTCCGAACAGGGCCTT 58.420 50.000 1.32 0.00 41.52 4.35
84 85 1.694696 GATAGATTCCGAACAGGGCCT 59.305 52.381 0.00 0.00 41.52 5.19
85 86 1.694696 AGATAGATTCCGAACAGGGCC 59.305 52.381 0.00 0.00 41.52 5.80
86 87 2.289133 GGAGATAGATTCCGAACAGGGC 60.289 54.545 0.00 0.00 41.52 5.19
87 88 3.235200 AGGAGATAGATTCCGAACAGGG 58.765 50.000 0.00 0.00 39.77 4.45
88 89 3.257127 GGAGGAGATAGATTCCGAACAGG 59.743 52.174 0.00 0.00 39.77 4.00
89 90 4.513198 GGAGGAGATAGATTCCGAACAG 57.487 50.000 0.00 0.00 39.77 3.16
95 96 0.528470 CCGCGGAGGAGATAGATTCC 59.472 60.000 24.07 0.00 45.00 3.01
96 97 1.535833 TCCGCGGAGGAGATAGATTC 58.464 55.000 27.28 0.00 45.98 2.52
97 98 3.747735 TCCGCGGAGGAGATAGATT 57.252 52.632 27.28 0.00 45.98 2.40
111 112 3.941657 AAGCTCCGCAACTCTCCGC 62.942 63.158 0.00 0.00 0.00 5.54
112 113 2.097038 CAAGCTCCGCAACTCTCCG 61.097 63.158 0.00 0.00 0.00 4.63
113 114 1.743252 CCAAGCTCCGCAACTCTCC 60.743 63.158 0.00 0.00 0.00 3.71
114 115 0.603975 AACCAAGCTCCGCAACTCTC 60.604 55.000 0.00 0.00 0.00 3.20
115 116 0.179018 AAACCAAGCTCCGCAACTCT 60.179 50.000 0.00 0.00 0.00 3.24
116 117 0.668535 AAAACCAAGCTCCGCAACTC 59.331 50.000 0.00 0.00 0.00 3.01
117 118 0.385390 CAAAACCAAGCTCCGCAACT 59.615 50.000 0.00 0.00 0.00 3.16
118 119 0.597377 CCAAAACCAAGCTCCGCAAC 60.597 55.000 0.00 0.00 0.00 4.17
119 120 0.753479 TCCAAAACCAAGCTCCGCAA 60.753 50.000 0.00 0.00 0.00 4.85
120 121 0.753479 TTCCAAAACCAAGCTCCGCA 60.753 50.000 0.00 0.00 0.00 5.69
121 122 0.039165 CTTCCAAAACCAAGCTCCGC 60.039 55.000 0.00 0.00 0.00 5.54
122 123 0.039165 GCTTCCAAAACCAAGCTCCG 60.039 55.000 0.00 0.00 41.61 4.63
123 124 3.894257 GCTTCCAAAACCAAGCTCC 57.106 52.632 0.00 0.00 41.61 4.70
126 127 0.039165 CGGAGCTTCCAAAACCAAGC 60.039 55.000 0.00 0.00 44.63 4.01
127 128 1.266989 GACGGAGCTTCCAAAACCAAG 59.733 52.381 0.00 0.00 35.91 3.61
128 129 1.314730 GACGGAGCTTCCAAAACCAA 58.685 50.000 0.00 0.00 35.91 3.67
129 130 0.181587 TGACGGAGCTTCCAAAACCA 59.818 50.000 0.00 0.00 35.91 3.67
130 131 1.314730 TTGACGGAGCTTCCAAAACC 58.685 50.000 0.00 0.00 35.91 3.27
131 132 2.357952 ACTTTGACGGAGCTTCCAAAAC 59.642 45.455 0.00 0.00 35.91 2.43
132 133 2.357637 CACTTTGACGGAGCTTCCAAAA 59.642 45.455 0.00 0.00 35.91 2.44
133 134 1.946768 CACTTTGACGGAGCTTCCAAA 59.053 47.619 0.00 0.00 35.91 3.28
134 135 1.140052 TCACTTTGACGGAGCTTCCAA 59.860 47.619 0.00 0.00 35.91 3.53
135 136 0.756294 TCACTTTGACGGAGCTTCCA 59.244 50.000 0.00 0.00 35.91 3.53
136 137 1.270358 ACTCACTTTGACGGAGCTTCC 60.270 52.381 0.00 0.00 31.88 3.46
137 138 2.156343 ACTCACTTTGACGGAGCTTC 57.844 50.000 0.00 0.00 31.88 3.86
138 139 2.213499 CAACTCACTTTGACGGAGCTT 58.787 47.619 0.00 0.00 31.88 3.74
139 140 1.871080 CAACTCACTTTGACGGAGCT 58.129 50.000 0.00 0.00 31.88 4.09
140 141 0.235926 GCAACTCACTTTGACGGAGC 59.764 55.000 0.00 0.00 31.88 4.70
141 142 1.528586 CTGCAACTCACTTTGACGGAG 59.471 52.381 0.00 0.00 34.85 4.63
142 143 1.134521 ACTGCAACTCACTTTGACGGA 60.135 47.619 0.00 0.00 0.00 4.69
143 144 1.299541 ACTGCAACTCACTTTGACGG 58.700 50.000 0.00 0.00 0.00 4.79
144 145 3.354397 GAAACTGCAACTCACTTTGACG 58.646 45.455 0.00 0.00 0.00 4.35
145 146 3.181510 ACGAAACTGCAACTCACTTTGAC 60.182 43.478 0.00 0.00 0.00 3.18
146 147 3.006940 ACGAAACTGCAACTCACTTTGA 58.993 40.909 0.00 0.00 0.00 2.69
147 148 3.181511 TGACGAAACTGCAACTCACTTTG 60.182 43.478 0.00 0.00 0.00 2.77
148 149 3.006940 TGACGAAACTGCAACTCACTTT 58.993 40.909 0.00 0.00 0.00 2.66
149 150 2.609459 CTGACGAAACTGCAACTCACTT 59.391 45.455 0.00 0.00 0.00 3.16
150 151 2.205074 CTGACGAAACTGCAACTCACT 58.795 47.619 0.00 0.00 0.00 3.41
151 152 1.333258 GCTGACGAAACTGCAACTCAC 60.333 52.381 0.00 0.00 35.40 3.51
152 153 0.937304 GCTGACGAAACTGCAACTCA 59.063 50.000 0.00 0.00 35.40 3.41
153 154 1.193426 GAGCTGACGAAACTGCAACTC 59.807 52.381 0.00 0.00 37.23 3.01
154 155 1.221414 GAGCTGACGAAACTGCAACT 58.779 50.000 0.00 0.00 37.23 3.16
155 156 0.235926 GGAGCTGACGAAACTGCAAC 59.764 55.000 0.00 0.00 37.23 4.17
156 157 0.179059 TGGAGCTGACGAAACTGCAA 60.179 50.000 0.00 0.00 37.23 4.08
157 158 0.601046 CTGGAGCTGACGAAACTGCA 60.601 55.000 0.00 0.00 37.23 4.41
158 159 1.294659 CCTGGAGCTGACGAAACTGC 61.295 60.000 0.00 0.00 35.51 4.40
159 160 0.318441 TCCTGGAGCTGACGAAACTG 59.682 55.000 0.00 0.00 0.00 3.16
160 161 0.605589 CTCCTGGAGCTGACGAAACT 59.394 55.000 11.42 0.00 0.00 2.66
161 162 3.129792 CTCCTGGAGCTGACGAAAC 57.870 57.895 11.42 0.00 0.00 2.78
172 173 0.395862 CCTCTAACTCCGCTCCTGGA 60.396 60.000 0.00 0.00 36.37 3.86
173 174 0.395862 TCCTCTAACTCCGCTCCTGG 60.396 60.000 0.00 0.00 0.00 4.45
174 175 1.028905 CTCCTCTAACTCCGCTCCTG 58.971 60.000 0.00 0.00 0.00 3.86
175 176 0.753848 GCTCCTCTAACTCCGCTCCT 60.754 60.000 0.00 0.00 0.00 3.69
176 177 1.737201 GCTCCTCTAACTCCGCTCC 59.263 63.158 0.00 0.00 0.00 4.70
177 178 1.357334 CGCTCCTCTAACTCCGCTC 59.643 63.158 0.00 0.00 0.00 5.03
178 179 2.122167 CCGCTCCTCTAACTCCGCT 61.122 63.158 0.00 0.00 0.00 5.52
179 180 2.065906 CTCCGCTCCTCTAACTCCGC 62.066 65.000 0.00 0.00 0.00 5.54
180 181 0.464013 TCTCCGCTCCTCTAACTCCG 60.464 60.000 0.00 0.00 0.00 4.63
181 182 1.314730 CTCTCCGCTCCTCTAACTCC 58.685 60.000 0.00 0.00 0.00 3.85
182 183 1.134037 TCCTCTCCGCTCCTCTAACTC 60.134 57.143 0.00 0.00 0.00 3.01
183 184 0.920438 TCCTCTCCGCTCCTCTAACT 59.080 55.000 0.00 0.00 0.00 2.24
184 185 1.406180 GTTCCTCTCCGCTCCTCTAAC 59.594 57.143 0.00 0.00 0.00 2.34
185 186 1.685491 GGTTCCTCTCCGCTCCTCTAA 60.685 57.143 0.00 0.00 0.00 2.10
186 187 0.106619 GGTTCCTCTCCGCTCCTCTA 60.107 60.000 0.00 0.00 0.00 2.43
187 188 1.380650 GGTTCCTCTCCGCTCCTCT 60.381 63.158 0.00 0.00 0.00 3.69
188 189 2.776913 CGGTTCCTCTCCGCTCCTC 61.777 68.421 0.00 0.00 41.48 3.71
189 190 2.756283 CGGTTCCTCTCCGCTCCT 60.756 66.667 0.00 0.00 41.48 3.69
190 191 2.348888 TTCGGTTCCTCTCCGCTCC 61.349 63.158 0.00 0.00 46.49 4.70
191 192 1.153804 GTTCGGTTCCTCTCCGCTC 60.154 63.158 0.00 0.00 46.49 5.03
192 193 1.906824 TGTTCGGTTCCTCTCCGCT 60.907 57.895 0.00 0.00 46.49 5.52
193 194 1.737008 GTGTTCGGTTCCTCTCCGC 60.737 63.158 0.00 0.00 46.49 5.54
195 196 0.246910 GGAGTGTTCGGTTCCTCTCC 59.753 60.000 0.00 0.00 35.45 3.71
196 197 0.246910 GGGAGTGTTCGGTTCCTCTC 59.753 60.000 0.00 0.00 0.00 3.20
197 198 0.178929 AGGGAGTGTTCGGTTCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
198 199 1.553706 TAGGGAGTGTTCGGTTCCTC 58.446 55.000 0.00 0.00 0.00 3.71
199 200 1.900486 CTTAGGGAGTGTTCGGTTCCT 59.100 52.381 0.00 0.00 0.00 3.36
200 201 1.675116 GCTTAGGGAGTGTTCGGTTCC 60.675 57.143 0.00 0.00 0.00 3.62
201 202 1.001633 TGCTTAGGGAGTGTTCGGTTC 59.998 52.381 0.00 0.00 0.00 3.62
202 203 1.053424 TGCTTAGGGAGTGTTCGGTT 58.947 50.000 0.00 0.00 0.00 4.44
203 204 1.276622 ATGCTTAGGGAGTGTTCGGT 58.723 50.000 0.00 0.00 0.00 4.69
204 205 2.693591 TCTATGCTTAGGGAGTGTTCGG 59.306 50.000 6.78 0.00 0.00 4.30
205 206 3.632604 TCTCTATGCTTAGGGAGTGTTCG 59.367 47.826 5.11 0.00 29.59 3.95
206 207 5.452636 CCTTCTCTATGCTTAGGGAGTGTTC 60.453 48.000 9.01 0.00 36.30 3.18
207 208 4.407296 CCTTCTCTATGCTTAGGGAGTGTT 59.593 45.833 9.01 0.00 36.30 3.32
208 209 3.964031 CCTTCTCTATGCTTAGGGAGTGT 59.036 47.826 9.01 0.00 36.30 3.55
209 210 4.038642 GTCCTTCTCTATGCTTAGGGAGTG 59.961 50.000 9.01 6.88 36.30 3.51
210 211 4.219919 GTCCTTCTCTATGCTTAGGGAGT 58.780 47.826 9.01 0.00 36.30 3.85
211 212 4.219115 TGTCCTTCTCTATGCTTAGGGAG 58.781 47.826 9.01 4.70 36.30 4.30
212 213 4.265856 TGTCCTTCTCTATGCTTAGGGA 57.734 45.455 5.11 5.11 32.90 4.20
213 214 5.559148 AATGTCCTTCTCTATGCTTAGGG 57.441 43.478 6.78 3.53 0.00 3.53
214 215 8.964476 TTTTAATGTCCTTCTCTATGCTTAGG 57.036 34.615 6.78 0.00 0.00 2.69
217 218 9.692325 AGATTTTTAATGTCCTTCTCTATGCTT 57.308 29.630 0.00 0.00 0.00 3.91
218 219 9.336171 GAGATTTTTAATGTCCTTCTCTATGCT 57.664 33.333 0.00 0.00 0.00 3.79
219 220 9.113838 TGAGATTTTTAATGTCCTTCTCTATGC 57.886 33.333 0.00 0.00 31.61 3.14
223 224 9.171877 GTCATGAGATTTTTAATGTCCTTCTCT 57.828 33.333 0.00 0.00 31.61 3.10
224 225 8.950210 TGTCATGAGATTTTTAATGTCCTTCTC 58.050 33.333 0.00 0.00 0.00 2.87
225 226 8.868522 TGTCATGAGATTTTTAATGTCCTTCT 57.131 30.769 0.00 0.00 0.00 2.85
226 227 9.346725 GTTGTCATGAGATTTTTAATGTCCTTC 57.653 33.333 0.00 0.00 0.00 3.46
227 228 8.023128 CGTTGTCATGAGATTTTTAATGTCCTT 58.977 33.333 0.00 0.00 0.00 3.36
228 229 7.174946 ACGTTGTCATGAGATTTTTAATGTCCT 59.825 33.333 0.00 0.00 0.00 3.85
229 230 7.305474 ACGTTGTCATGAGATTTTTAATGTCC 58.695 34.615 0.00 0.00 0.00 4.02
230 231 8.728088 AACGTTGTCATGAGATTTTTAATGTC 57.272 30.769 0.00 0.00 0.00 3.06
231 232 8.567948 AGAACGTTGTCATGAGATTTTTAATGT 58.432 29.630 5.00 0.00 0.00 2.71
232 233 8.955061 AGAACGTTGTCATGAGATTTTTAATG 57.045 30.769 5.00 0.00 0.00 1.90
235 236 8.664798 CCATAGAACGTTGTCATGAGATTTTTA 58.335 33.333 5.00 0.00 0.00 1.52
236 237 7.174946 ACCATAGAACGTTGTCATGAGATTTTT 59.825 33.333 5.00 0.00 0.00 1.94
237 238 6.655003 ACCATAGAACGTTGTCATGAGATTTT 59.345 34.615 5.00 0.00 0.00 1.82
238 239 6.173339 ACCATAGAACGTTGTCATGAGATTT 58.827 36.000 5.00 0.00 0.00 2.17
239 240 5.734720 ACCATAGAACGTTGTCATGAGATT 58.265 37.500 5.00 0.00 0.00 2.40
240 241 5.344743 ACCATAGAACGTTGTCATGAGAT 57.655 39.130 5.00 0.00 0.00 2.75
241 242 4.801330 ACCATAGAACGTTGTCATGAGA 57.199 40.909 5.00 0.00 0.00 3.27
242 243 5.408299 TCAAACCATAGAACGTTGTCATGAG 59.592 40.000 5.00 3.47 0.00 2.90
243 244 5.301555 TCAAACCATAGAACGTTGTCATGA 58.698 37.500 5.00 3.05 0.00 3.07
244 245 5.605564 TCAAACCATAGAACGTTGTCATG 57.394 39.130 5.00 5.96 0.00 3.07
245 246 7.768582 TGATATCAAACCATAGAACGTTGTCAT 59.231 33.333 5.00 0.00 0.00 3.06
246 247 7.064134 GTGATATCAAACCATAGAACGTTGTCA 59.936 37.037 5.00 0.00 0.00 3.58
247 248 7.399523 GTGATATCAAACCATAGAACGTTGTC 58.600 38.462 5.00 0.00 0.00 3.18
248 249 6.035650 CGTGATATCAAACCATAGAACGTTGT 59.964 38.462 5.00 3.64 0.00 3.32
249 250 6.410845 CGTGATATCAAACCATAGAACGTTG 58.589 40.000 5.00 0.00 0.00 4.10
250 251 5.522460 CCGTGATATCAAACCATAGAACGTT 59.478 40.000 7.07 0.00 0.00 3.99
251 252 5.047847 CCGTGATATCAAACCATAGAACGT 58.952 41.667 7.07 0.00 0.00 3.99
252 253 5.047847 ACCGTGATATCAAACCATAGAACG 58.952 41.667 7.07 2.65 0.00 3.95
253 254 5.236478 CCACCGTGATATCAAACCATAGAAC 59.764 44.000 7.07 0.00 0.00 3.01
254 255 5.364778 CCACCGTGATATCAAACCATAGAA 58.635 41.667 7.07 0.00 0.00 2.10
255 256 4.742440 GCCACCGTGATATCAAACCATAGA 60.742 45.833 7.07 0.00 0.00 1.98
256 257 3.498397 GCCACCGTGATATCAAACCATAG 59.502 47.826 7.07 0.00 0.00 2.23
257 258 3.472652 GCCACCGTGATATCAAACCATA 58.527 45.455 7.07 0.00 0.00 2.74
258 259 2.297701 GCCACCGTGATATCAAACCAT 58.702 47.619 7.07 0.00 0.00 3.55
259 260 1.745232 GCCACCGTGATATCAAACCA 58.255 50.000 7.07 0.00 0.00 3.67
260 261 0.655733 CGCCACCGTGATATCAAACC 59.344 55.000 7.07 0.00 0.00 3.27
261 262 0.655733 CCGCCACCGTGATATCAAAC 59.344 55.000 7.07 0.00 0.00 2.93
262 263 1.092921 GCCGCCACCGTGATATCAAA 61.093 55.000 7.07 0.00 0.00 2.69
263 264 1.522806 GCCGCCACCGTGATATCAA 60.523 57.895 7.07 0.00 0.00 2.57
264 265 1.966901 AAGCCGCCACCGTGATATCA 61.967 55.000 0.00 0.00 0.00 2.15
265 266 1.222115 GAAGCCGCCACCGTGATATC 61.222 60.000 0.00 0.00 0.00 1.63
266 267 1.227556 GAAGCCGCCACCGTGATAT 60.228 57.895 0.00 0.00 0.00 1.63
267 268 2.185867 GAAGCCGCCACCGTGATA 59.814 61.111 0.00 0.00 0.00 2.15
268 269 3.706373 AGAAGCCGCCACCGTGAT 61.706 61.111 0.00 0.00 0.00 3.06
269 270 4.680237 CAGAAGCCGCCACCGTGA 62.680 66.667 0.00 0.00 0.00 4.35
273 274 3.723912 TATTCACCAGAAGCCGCCACC 62.724 57.143 0.00 0.00 37.14 4.61
274 275 0.392461 TATTCACCAGAAGCCGCCAC 60.392 55.000 0.00 0.00 37.14 5.01
275 276 0.326595 TTATTCACCAGAAGCCGCCA 59.673 50.000 0.00 0.00 37.14 5.69
276 277 0.733150 GTTATTCACCAGAAGCCGCC 59.267 55.000 0.00 0.00 37.14 6.13
277 278 1.398390 CTGTTATTCACCAGAAGCCGC 59.602 52.381 0.00 0.00 37.14 6.53
278 279 2.673368 GTCTGTTATTCACCAGAAGCCG 59.327 50.000 0.00 0.00 39.29 5.52
279 280 3.437049 GTGTCTGTTATTCACCAGAAGCC 59.563 47.826 0.00 0.00 39.29 4.35
280 281 4.319177 AGTGTCTGTTATTCACCAGAAGC 58.681 43.478 0.00 0.00 39.29 3.86
281 282 5.541845 TGAGTGTCTGTTATTCACCAGAAG 58.458 41.667 0.00 0.00 39.29 2.85
282 283 5.304357 TCTGAGTGTCTGTTATTCACCAGAA 59.696 40.000 0.00 0.00 39.29 3.02
283 284 4.832823 TCTGAGTGTCTGTTATTCACCAGA 59.167 41.667 0.00 0.00 37.22 3.86
284 285 4.926238 GTCTGAGTGTCTGTTATTCACCAG 59.074 45.833 0.00 0.00 34.72 4.00
285 286 4.343814 TGTCTGAGTGTCTGTTATTCACCA 59.656 41.667 0.00 0.00 33.21 4.17
286 287 4.883083 TGTCTGAGTGTCTGTTATTCACC 58.117 43.478 0.00 0.00 33.21 4.02
287 288 5.773575 TCTGTCTGAGTGTCTGTTATTCAC 58.226 41.667 0.00 0.00 0.00 3.18
288 289 6.405278 TTCTGTCTGAGTGTCTGTTATTCA 57.595 37.500 0.00 0.00 0.00 2.57
289 290 8.247562 AGTATTCTGTCTGAGTGTCTGTTATTC 58.752 37.037 0.00 0.00 0.00 1.75
290 291 8.128322 AGTATTCTGTCTGAGTGTCTGTTATT 57.872 34.615 0.00 0.00 0.00 1.40
291 292 7.710676 AGTATTCTGTCTGAGTGTCTGTTAT 57.289 36.000 0.00 0.00 0.00 1.89
292 293 7.337184 CCTAGTATTCTGTCTGAGTGTCTGTTA 59.663 40.741 0.00 0.00 0.00 2.41
293 294 6.151985 CCTAGTATTCTGTCTGAGTGTCTGTT 59.848 42.308 0.00 0.00 0.00 3.16
294 295 5.650266 CCTAGTATTCTGTCTGAGTGTCTGT 59.350 44.000 0.00 0.00 0.00 3.41
295 296 5.067153 CCCTAGTATTCTGTCTGAGTGTCTG 59.933 48.000 0.00 0.00 0.00 3.51
296 297 5.197451 CCCTAGTATTCTGTCTGAGTGTCT 58.803 45.833 0.00 0.00 0.00 3.41
297 298 4.202070 GCCCTAGTATTCTGTCTGAGTGTC 60.202 50.000 0.00 0.00 0.00 3.67
298 299 3.702045 GCCCTAGTATTCTGTCTGAGTGT 59.298 47.826 0.00 0.00 0.00 3.55
299 300 3.068873 GGCCCTAGTATTCTGTCTGAGTG 59.931 52.174 0.00 0.00 0.00 3.51
300 301 3.301274 GGCCCTAGTATTCTGTCTGAGT 58.699 50.000 0.00 0.00 0.00 3.41
301 302 3.300388 TGGCCCTAGTATTCTGTCTGAG 58.700 50.000 0.00 0.00 0.00 3.35
302 303 3.398318 TGGCCCTAGTATTCTGTCTGA 57.602 47.619 0.00 0.00 0.00 3.27
303 304 3.805108 GCATGGCCCTAGTATTCTGTCTG 60.805 52.174 0.00 0.00 0.00 3.51
304 305 2.370189 GCATGGCCCTAGTATTCTGTCT 59.630 50.000 0.00 0.00 0.00 3.41
305 306 2.370189 AGCATGGCCCTAGTATTCTGTC 59.630 50.000 0.00 0.00 0.00 3.51
306 307 2.412591 AGCATGGCCCTAGTATTCTGT 58.587 47.619 0.00 0.00 0.00 3.41
307 308 3.324846 TGTAGCATGGCCCTAGTATTCTG 59.675 47.826 0.00 0.00 0.00 3.02
308 309 3.580458 CTGTAGCATGGCCCTAGTATTCT 59.420 47.826 0.00 0.00 0.00 2.40
309 310 3.578716 TCTGTAGCATGGCCCTAGTATTC 59.421 47.826 0.00 0.00 0.00 1.75
310 311 3.580458 CTCTGTAGCATGGCCCTAGTATT 59.420 47.826 0.00 0.00 0.00 1.89
311 312 3.169099 CTCTGTAGCATGGCCCTAGTAT 58.831 50.000 0.00 0.00 0.00 2.12
312 313 2.177016 TCTCTGTAGCATGGCCCTAGTA 59.823 50.000 0.00 0.00 0.00 1.82
313 314 1.062886 TCTCTGTAGCATGGCCCTAGT 60.063 52.381 0.00 0.00 0.00 2.57
314 315 1.709578 TCTCTGTAGCATGGCCCTAG 58.290 55.000 0.00 0.00 0.00 3.02
315 316 2.174685 TTCTCTGTAGCATGGCCCTA 57.825 50.000 0.00 0.00 0.00 3.53
316 317 1.211457 CTTTCTCTGTAGCATGGCCCT 59.789 52.381 0.00 0.00 0.00 5.19
317 318 1.210478 TCTTTCTCTGTAGCATGGCCC 59.790 52.381 0.00 0.00 0.00 5.80
318 319 2.559440 CTCTTTCTCTGTAGCATGGCC 58.441 52.381 0.00 0.00 0.00 5.36
319 320 1.939255 GCTCTTTCTCTGTAGCATGGC 59.061 52.381 0.00 0.00 35.05 4.40
320 321 3.540314 AGCTCTTTCTCTGTAGCATGG 57.460 47.619 0.00 0.00 37.44 3.66
321 322 4.757594 AGAAGCTCTTTCTCTGTAGCATG 58.242 43.478 0.00 0.00 42.54 4.06
322 323 5.419239 AAGAAGCTCTTTCTCTGTAGCAT 57.581 39.130 0.00 0.00 45.41 3.79
323 324 4.881019 AAGAAGCTCTTTCTCTGTAGCA 57.119 40.909 0.00 0.00 45.41 3.49
324 325 6.552859 AAAAAGAAGCTCTTTCTCTGTAGC 57.447 37.500 10.34 0.00 45.19 3.58
325 326 8.594881 TGTAAAAAGAAGCTCTTTCTCTGTAG 57.405 34.615 10.34 0.00 45.19 2.74
326 327 7.657761 CCTGTAAAAAGAAGCTCTTTCTCTGTA 59.342 37.037 10.34 0.00 45.19 2.74
327 328 6.484977 CCTGTAAAAAGAAGCTCTTTCTCTGT 59.515 38.462 10.34 0.00 45.19 3.41
328 329 6.708054 TCCTGTAAAAAGAAGCTCTTTCTCTG 59.292 38.462 10.34 8.36 45.19 3.35
329 330 6.708502 GTCCTGTAAAAAGAAGCTCTTTCTCT 59.291 38.462 10.34 0.00 45.19 3.10
330 331 6.708502 AGTCCTGTAAAAAGAAGCTCTTTCTC 59.291 38.462 10.34 0.00 45.19 2.87
331 332 6.596621 AGTCCTGTAAAAAGAAGCTCTTTCT 58.403 36.000 10.34 0.00 45.19 2.52
332 333 6.869315 AGTCCTGTAAAAAGAAGCTCTTTC 57.131 37.500 10.34 0.00 45.19 2.62
334 335 8.041919 GGTATAGTCCTGTAAAAAGAAGCTCTT 58.958 37.037 0.00 0.00 38.59 2.85
335 336 7.400627 AGGTATAGTCCTGTAAAAAGAAGCTCT 59.599 37.037 0.00 0.00 36.35 4.09
336 337 7.492994 CAGGTATAGTCCTGTAAAAAGAAGCTC 59.507 40.741 4.75 0.00 46.92 4.09
337 338 7.331791 CAGGTATAGTCCTGTAAAAAGAAGCT 58.668 38.462 4.75 0.00 46.92 3.74
338 339 7.541122 CAGGTATAGTCCTGTAAAAAGAAGC 57.459 40.000 4.75 0.00 46.92 3.86
350 351 6.040616 GCTACACATAACACAGGTATAGTCCT 59.959 42.308 0.00 0.00 38.51 3.85
351 352 6.183360 TGCTACACATAACACAGGTATAGTCC 60.183 42.308 0.00 0.00 0.00 3.85
352 353 6.802608 TGCTACACATAACACAGGTATAGTC 58.197 40.000 0.00 0.00 0.00 2.59
353 354 6.183360 CCTGCTACACATAACACAGGTATAGT 60.183 42.308 0.00 0.00 39.85 2.12
354 355 6.216569 CCTGCTACACATAACACAGGTATAG 58.783 44.000 0.00 0.00 39.85 1.31
355 356 5.452776 GCCTGCTACACATAACACAGGTATA 60.453 44.000 8.51 0.00 45.20 1.47
356 357 4.683400 GCCTGCTACACATAACACAGGTAT 60.683 45.833 8.51 0.00 45.20 2.73
357 358 3.369052 GCCTGCTACACATAACACAGGTA 60.369 47.826 8.51 0.00 45.20 3.08
358 359 2.615493 GCCTGCTACACATAACACAGGT 60.615 50.000 8.51 0.00 45.20 4.00
359 360 2.009774 GCCTGCTACACATAACACAGG 58.990 52.381 0.00 0.00 45.98 4.00
360 361 2.698803 TGCCTGCTACACATAACACAG 58.301 47.619 0.00 0.00 0.00 3.66
361 362 2.849294 TGCCTGCTACACATAACACA 57.151 45.000 0.00 0.00 0.00 3.72
362 363 4.414852 CATTTGCCTGCTACACATAACAC 58.585 43.478 0.00 0.00 0.00 3.32
363 364 3.119531 GCATTTGCCTGCTACACATAACA 60.120 43.478 0.00 0.00 39.12 2.41
364 365 3.438360 GCATTTGCCTGCTACACATAAC 58.562 45.455 0.00 0.00 39.12 1.89
365 366 3.781079 GCATTTGCCTGCTACACATAA 57.219 42.857 0.00 0.00 39.12 1.90
374 375 1.079612 GTTCCCAGCATTTGCCTGC 60.080 57.895 0.00 0.00 43.38 4.85
375 376 0.680618 TTGTTCCCAGCATTTGCCTG 59.319 50.000 0.00 0.00 43.38 4.85
376 377 0.971386 CTTGTTCCCAGCATTTGCCT 59.029 50.000 0.00 0.00 43.38 4.75
377 378 0.968405 TCTTGTTCCCAGCATTTGCC 59.032 50.000 0.00 0.00 43.38 4.52
378 379 1.888512 TCTCTTGTTCCCAGCATTTGC 59.111 47.619 0.00 0.00 42.49 3.68
379 380 3.760151 TGATCTCTTGTTCCCAGCATTTG 59.240 43.478 0.00 0.00 0.00 2.32
380 381 3.760684 GTGATCTCTTGTTCCCAGCATTT 59.239 43.478 0.00 0.00 0.00 2.32
381 382 3.009916 AGTGATCTCTTGTTCCCAGCATT 59.990 43.478 0.00 0.00 0.00 3.56
382 383 2.575279 AGTGATCTCTTGTTCCCAGCAT 59.425 45.455 0.00 0.00 0.00 3.79
383 384 1.980765 AGTGATCTCTTGTTCCCAGCA 59.019 47.619 0.00 0.00 0.00 4.41
384 385 2.746362 CAAGTGATCTCTTGTTCCCAGC 59.254 50.000 23.37 0.00 39.66 4.85
392 393 7.025963 GCATAGGAAAAACAAGTGATCTCTTG 58.974 38.462 27.72 27.72 46.89 3.02
393 394 6.151817 GGCATAGGAAAAACAAGTGATCTCTT 59.848 38.462 4.18 4.18 0.00 2.85
394 395 5.649831 GGCATAGGAAAAACAAGTGATCTCT 59.350 40.000 0.00 0.00 0.00 3.10
395 396 5.163612 GGGCATAGGAAAAACAAGTGATCTC 60.164 44.000 0.00 0.00 0.00 2.75
396 397 4.706962 GGGCATAGGAAAAACAAGTGATCT 59.293 41.667 0.00 0.00 0.00 2.75
397 398 4.462483 TGGGCATAGGAAAAACAAGTGATC 59.538 41.667 0.00 0.00 0.00 2.92
398 399 4.415596 TGGGCATAGGAAAAACAAGTGAT 58.584 39.130 0.00 0.00 0.00 3.06
399 400 3.838565 TGGGCATAGGAAAAACAAGTGA 58.161 40.909 0.00 0.00 0.00 3.41
400 401 4.806640 ATGGGCATAGGAAAAACAAGTG 57.193 40.909 0.00 0.00 0.00 3.16
401 402 5.550290 CAAATGGGCATAGGAAAAACAAGT 58.450 37.500 0.00 0.00 0.00 3.16
402 403 4.392754 GCAAATGGGCATAGGAAAAACAAG 59.607 41.667 0.00 0.00 0.00 3.16
403 404 4.041444 AGCAAATGGGCATAGGAAAAACAA 59.959 37.500 0.00 0.00 35.83 2.83
404 405 3.582208 AGCAAATGGGCATAGGAAAAACA 59.418 39.130 0.00 0.00 35.83 2.83
405 406 4.206477 AGCAAATGGGCATAGGAAAAAC 57.794 40.909 0.00 0.00 35.83 2.43
406 407 6.365970 TTTAGCAAATGGGCATAGGAAAAA 57.634 33.333 0.00 0.00 35.83 1.94
407 408 6.365970 TTTTAGCAAATGGGCATAGGAAAA 57.634 33.333 0.00 0.00 35.83 2.29
408 409 6.347696 CATTTTAGCAAATGGGCATAGGAAA 58.652 36.000 2.33 0.00 43.95 3.13
409 410 5.916318 CATTTTAGCAAATGGGCATAGGAA 58.084 37.500 2.33 0.00 43.95 3.36
410 411 5.534207 CATTTTAGCAAATGGGCATAGGA 57.466 39.130 2.33 0.00 43.95 2.94
420 421 3.681593 TGCCAGCACATTTTAGCAAAT 57.318 38.095 0.00 0.00 32.36 2.32
421 422 3.465742 TTGCCAGCACATTTTAGCAAA 57.534 38.095 0.00 0.00 37.29 3.68
422 423 3.681593 ATTGCCAGCACATTTTAGCAA 57.318 38.095 0.00 0.00 43.59 3.91
423 424 6.653526 ATATATTGCCAGCACATTTTAGCA 57.346 33.333 0.00 0.00 0.00 3.49
424 425 7.439056 ACAAATATATTGCCAGCACATTTTAGC 59.561 33.333 0.00 0.00 0.00 3.09
425 426 8.876275 ACAAATATATTGCCAGCACATTTTAG 57.124 30.769 0.00 0.00 0.00 1.85
426 427 7.925483 GGACAAATATATTGCCAGCACATTTTA 59.075 33.333 0.00 0.00 0.00 1.52
427 428 6.762661 GGACAAATATATTGCCAGCACATTTT 59.237 34.615 0.00 0.00 0.00 1.82
428 429 6.098695 AGGACAAATATATTGCCAGCACATTT 59.901 34.615 0.00 0.00 0.00 2.32
429 430 5.599656 AGGACAAATATATTGCCAGCACATT 59.400 36.000 0.00 0.00 0.00 2.71
430 431 5.142639 AGGACAAATATATTGCCAGCACAT 58.857 37.500 0.00 0.00 0.00 3.21
431 432 4.535781 AGGACAAATATATTGCCAGCACA 58.464 39.130 0.00 0.00 0.00 4.57
432 433 4.022849 GGAGGACAAATATATTGCCAGCAC 60.023 45.833 0.00 0.00 0.00 4.40
433 434 4.141181 AGGAGGACAAATATATTGCCAGCA 60.141 41.667 0.00 0.00 0.00 4.41
434 435 4.401925 AGGAGGACAAATATATTGCCAGC 58.598 43.478 0.00 0.00 0.00 4.85
435 436 5.242393 CCAAGGAGGACAAATATATTGCCAG 59.758 44.000 0.00 0.00 41.22 4.85
436 437 5.103728 TCCAAGGAGGACAAATATATTGCCA 60.104 40.000 0.00 0.00 43.07 4.92
437 438 5.385198 TCCAAGGAGGACAAATATATTGCC 58.615 41.667 0.00 1.83 43.07 4.52
450 451 0.617820 GGGCTAGTGTCCAAGGAGGA 60.618 60.000 0.00 0.00 46.75 3.71
451 452 0.909610 TGGGCTAGTGTCCAAGGAGG 60.910 60.000 0.00 0.00 46.26 4.30
452 453 2.683916 TGGGCTAGTGTCCAAGGAG 58.316 57.895 0.00 0.00 46.26 3.69
453 454 4.989458 TGGGCTAGTGTCCAAGGA 57.011 55.556 0.00 0.00 46.26 3.36
458 459 1.490574 ATCTGACTGGGCTAGTGTCC 58.509 55.000 8.74 0.00 40.53 4.02
459 460 4.342378 TGAATATCTGACTGGGCTAGTGTC 59.658 45.833 8.74 0.00 40.53 3.67
460 461 4.290093 TGAATATCTGACTGGGCTAGTGT 58.710 43.478 8.74 0.00 40.53 3.55
461 462 4.944619 TGAATATCTGACTGGGCTAGTG 57.055 45.455 8.74 0.00 40.53 2.74
462 463 5.211973 TCTTGAATATCTGACTGGGCTAGT 58.788 41.667 2.00 2.00 44.02 2.57
463 464 5.279406 CCTCTTGAATATCTGACTGGGCTAG 60.279 48.000 0.00 0.00 0.00 3.42
464 465 4.590647 CCTCTTGAATATCTGACTGGGCTA 59.409 45.833 0.00 0.00 0.00 3.93
465 466 3.390639 CCTCTTGAATATCTGACTGGGCT 59.609 47.826 0.00 0.00 0.00 5.19
466 467 3.389329 TCCTCTTGAATATCTGACTGGGC 59.611 47.826 0.00 0.00 0.00 5.36
467 468 5.130145 ACTTCCTCTTGAATATCTGACTGGG 59.870 44.000 0.00 0.00 31.06 4.45
468 469 6.232581 ACTTCCTCTTGAATATCTGACTGG 57.767 41.667 0.00 0.00 31.06 4.00
469 470 7.326454 TCAACTTCCTCTTGAATATCTGACTG 58.674 38.462 0.00 0.00 31.06 3.51
470 471 7.398618 TCTCAACTTCCTCTTGAATATCTGACT 59.601 37.037 0.00 0.00 31.06 3.41
471 472 7.551585 TCTCAACTTCCTCTTGAATATCTGAC 58.448 38.462 0.00 0.00 31.06 3.51
472 473 7.724490 TCTCAACTTCCTCTTGAATATCTGA 57.276 36.000 0.00 0.00 31.06 3.27
473 474 8.783833 TTTCTCAACTTCCTCTTGAATATCTG 57.216 34.615 0.00 0.00 31.06 2.90
474 475 9.393512 CATTTCTCAACTTCCTCTTGAATATCT 57.606 33.333 0.00 0.00 31.06 1.98
475 476 9.171877 ACATTTCTCAACTTCCTCTTGAATATC 57.828 33.333 0.00 0.00 31.06 1.63
476 477 9.525826 AACATTTCTCAACTTCCTCTTGAATAT 57.474 29.630 0.00 0.00 31.06 1.28
477 478 8.924511 AACATTTCTCAACTTCCTCTTGAATA 57.075 30.769 0.00 0.00 31.06 1.75
478 479 7.830099 AACATTTCTCAACTTCCTCTTGAAT 57.170 32.000 0.00 0.00 31.06 2.57
479 480 8.746052 TTAACATTTCTCAACTTCCTCTTGAA 57.254 30.769 0.00 0.00 0.00 2.69
480 481 8.621286 GTTTAACATTTCTCAACTTCCTCTTGA 58.379 33.333 0.00 0.00 0.00 3.02
481 482 8.405531 TGTTTAACATTTCTCAACTTCCTCTTG 58.594 33.333 0.00 0.00 0.00 3.02
482 483 8.406297 GTGTTTAACATTTCTCAACTTCCTCTT 58.594 33.333 0.00 0.00 0.00 2.85
483 484 7.556275 TGTGTTTAACATTTCTCAACTTCCTCT 59.444 33.333 0.00 0.00 32.36 3.69
484 485 7.703328 TGTGTTTAACATTTCTCAACTTCCTC 58.297 34.615 0.00 0.00 32.36 3.71
485 486 7.639113 TGTGTTTAACATTTCTCAACTTCCT 57.361 32.000 0.00 0.00 32.36 3.36
486 487 8.871686 ATTGTGTTTAACATTTCTCAACTTCC 57.128 30.769 0.00 0.00 38.99 3.46
512 513 3.916172 GTGACGTACGTGACACAATGTAT 59.084 43.478 29.13 0.00 32.58 2.29
515 516 2.121009 TGTGACGTACGTGACACAATG 58.879 47.619 32.09 1.21 37.32 2.82
518 519 3.494232 CATATGTGACGTACGTGACACA 58.506 45.455 36.57 34.08 44.18 3.72
535 538 3.318313 CCAAGTCTGGTACCCTCCATAT 58.682 50.000 10.07 0.00 38.00 1.78
546 550 1.821061 CTCCTCACGCCAAGTCTGGT 61.821 60.000 0.00 0.00 45.53 4.00
548 552 1.739562 GCTCCTCACGCCAAGTCTG 60.740 63.158 0.00 0.00 0.00 3.51
559 563 5.075205 ACCAACTATCTATCCTAGCTCCTCA 59.925 44.000 0.00 0.00 0.00 3.86
560 564 5.576128 ACCAACTATCTATCCTAGCTCCTC 58.424 45.833 0.00 0.00 0.00 3.71
565 569 6.902771 TCAGAACCAACTATCTATCCTAGC 57.097 41.667 0.00 0.00 0.00 3.42
639 656 6.935240 TTGTTGGAGATTTTAGAGGAGAGA 57.065 37.500 0.00 0.00 0.00 3.10
640 657 7.108847 ACATTGTTGGAGATTTTAGAGGAGAG 58.891 38.462 0.00 0.00 0.00 3.20
641 665 7.020827 ACATTGTTGGAGATTTTAGAGGAGA 57.979 36.000 0.00 0.00 0.00 3.71
647 671 5.682862 GCGCATACATTGTTGGAGATTTTAG 59.317 40.000 0.30 0.00 0.00 1.85
683 707 2.665185 GTTATAGGCAGGGGCGCG 60.665 66.667 0.00 0.00 42.47 6.86
700 724 0.846401 CTGAGACGACGTGTTGTGTG 59.154 55.000 4.58 0.00 0.00 3.82
701 725 0.248907 CCTGAGACGACGTGTTGTGT 60.249 55.000 4.58 0.00 0.00 3.72
702 726 0.248907 ACCTGAGACGACGTGTTGTG 60.249 55.000 4.58 0.00 0.00 3.33
704 728 0.852777 CAACCTGAGACGACGTGTTG 59.147 55.000 4.58 9.49 0.00 3.33
746 771 4.040755 AGGAGGCTCTAATTACCATGTGT 58.959 43.478 15.23 0.00 0.00 3.72
758 783 2.188817 GGTTTGGAAGAGGAGGCTCTA 58.811 52.381 15.23 0.00 32.66 2.43
802 827 0.907486 CTGGAGGAAGACATGGCTGA 59.093 55.000 0.00 0.00 0.00 4.26
872 897 4.733136 GTGTGCCACAGGACGTAGTTCA 62.733 54.545 0.00 0.00 39.57 3.18
894 919 2.027073 CAGCTGCGGCGTAACTTGA 61.027 57.895 12.87 0.00 44.37 3.02
910 935 1.261238 AAGAACTCGGCTCCCCTCAG 61.261 60.000 0.00 0.00 0.00 3.35
929 954 0.529773 GATGCCGTCAACATAGCCGA 60.530 55.000 0.00 0.00 0.00 5.54
930 955 0.809636 TGATGCCGTCAACATAGCCG 60.810 55.000 0.00 0.00 32.78 5.52
991 1016 4.760530 TGATCTCGGACATTTCCTTCAT 57.239 40.909 0.00 0.00 40.23 2.57
992 1017 4.253685 GTTGATCTCGGACATTTCCTTCA 58.746 43.478 0.00 0.00 40.23 3.02
999 1024 2.432510 GAGAGGGTTGATCTCGGACATT 59.567 50.000 0.00 0.00 34.32 2.71
1009 1034 2.061061 GATGGGATGGAGAGGGTTGAT 58.939 52.381 0.00 0.00 0.00 2.57
1035 1060 2.608988 ACCTGCTGGTCCTCCCTG 60.609 66.667 9.88 0.00 44.78 4.45
1053 1078 4.127907 GGTTATTGAGTAGGTAGCCAAGC 58.872 47.826 0.00 0.00 0.00 4.01
1078 1103 1.865865 GTGACGAGCACCTCTTTGAA 58.134 50.000 0.00 0.00 41.78 2.69
1079 1104 0.318699 CGTGACGAGCACCTCTTTGA 60.319 55.000 0.00 0.00 44.85 2.69
1131 1157 3.204827 CATACCTGCCAGCGCCAC 61.205 66.667 2.29 0.00 0.00 5.01
1193 1220 5.329191 TTCCCCTTCTATGCATTGATCAT 57.671 39.130 11.66 0.00 0.00 2.45
1205 1232 2.438021 CCACCGATTGATTCCCCTTCTA 59.562 50.000 0.00 0.00 0.00 2.10
1210 1237 1.828224 GGCCACCGATTGATTCCCC 60.828 63.158 0.00 0.00 0.00 4.81
1340 1367 2.506472 GGCGGAGACAAGGGGATC 59.494 66.667 0.00 0.00 31.66 3.36
1342 1369 4.332543 AGGGCGGAGACAAGGGGA 62.333 66.667 0.00 0.00 37.00 4.81
1345 1372 2.427245 ATCGAGGGCGGAGACAAGG 61.427 63.158 0.00 0.00 37.00 3.61
1381 1408 1.492319 CGTAGAGCTCGTCGAGGGAG 61.492 65.000 23.09 7.14 34.62 4.30
1418 1445 2.356135 GTATTGGGTGACACGCTGATT 58.644 47.619 21.65 7.95 31.67 2.57
1430 1457 1.378514 CCAGCGCTTGGTATTGGGT 60.379 57.895 7.50 0.00 42.41 4.51
1463 1491 3.718097 TCGCCGCGTTCGCAAAAT 61.718 55.556 13.39 0.00 0.00 1.82
1485 1513 4.367023 GAGTACCCACCGCGCACA 62.367 66.667 8.75 0.00 0.00 4.57
1506 1534 4.467084 GGAGGGCCGCGATGACAA 62.467 66.667 8.23 0.00 0.00 3.18
1542 1570 2.347490 CTAGTGTTGCCGCCACCT 59.653 61.111 0.00 0.00 33.20 4.00
1543 1571 3.431725 GCTAGTGTTGCCGCCACC 61.432 66.667 0.00 0.00 33.20 4.61
1545 1573 2.112087 TTGCTAGTGTTGCCGCCA 59.888 55.556 0.00 0.00 0.00 5.69
1546 1574 2.561373 GTTGCTAGTGTTGCCGCC 59.439 61.111 0.00 0.00 0.00 6.13
1557 1585 3.074281 CGGGAACTGGGGTTGCTA 58.926 61.111 0.00 0.00 42.27 3.49
1615 1649 2.755876 TGATCTGCCCGAGTCGCT 60.756 61.111 7.12 0.00 0.00 4.93
1619 1653 2.660064 GGGTGTGATCTGCCCGAGT 61.660 63.158 0.00 0.00 32.16 4.18
1627 1661 1.267574 ACGGCATCAGGGTGTGATCT 61.268 55.000 0.00 0.00 44.73 2.75
1663 1698 1.133513 TGCAATGTGTCCAGGTTTCCT 60.134 47.619 0.00 0.00 0.00 3.36
1679 1714 3.485394 TGATACCAGCAGTCTTTTGCAA 58.515 40.909 0.00 0.00 46.47 4.08
1683 1718 5.245531 TCGAAATGATACCAGCAGTCTTTT 58.754 37.500 0.00 0.00 0.00 2.27
1724 1759 7.255242 CGGCAACAACCTTATCATAATCTTCAT 60.255 37.037 0.00 0.00 0.00 2.57
1732 1767 2.942376 CAGCGGCAACAACCTTATCATA 59.058 45.455 1.45 0.00 0.00 2.15
1737 1772 1.228124 AGCAGCGGCAACAACCTTA 60.228 52.632 12.44 0.00 44.61 2.69
1781 1816 1.433534 GCCGCTATCAAGATACCAGC 58.566 55.000 0.00 0.00 0.00 4.85
1788 1823 2.278596 GTCGCGCCGCTATCAAGA 60.279 61.111 7.78 0.00 0.00 3.02
1819 1854 2.290323 GCTTTACCTTCTCAAGCTCCCA 60.290 50.000 0.00 0.00 39.92 4.37
1842 1877 1.028330 TCCCGTGATACTTCTCGCGT 61.028 55.000 5.77 0.00 45.25 6.01
1866 1901 1.271001 CCACTGGCAGTGTGAATCTGA 60.271 52.381 37.43 0.00 44.50 3.27
1878 1913 1.831106 CTCATACCTACACCACTGGCA 59.169 52.381 0.00 0.00 0.00 4.92
1889 1924 5.508994 CCAACATGTCGTATGCTCATACCTA 60.509 44.000 12.80 1.36 40.31 3.08
1905 1940 4.094294 CGAATAACCGAATGACCAACATGT 59.906 41.667 0.00 0.00 39.39 3.21
1908 1943 3.666274 ACGAATAACCGAATGACCAACA 58.334 40.909 0.00 0.00 0.00 3.33
1909 1944 4.033243 GGTACGAATAACCGAATGACCAAC 59.967 45.833 0.00 0.00 0.00 3.77
1926 1961 4.220382 TGAATTTTACGAGAAGGGGTACGA 59.780 41.667 0.00 0.00 0.00 3.43
1956 1991 4.082026 GCACTAGGGACATGCAGAATTTTT 60.082 41.667 0.00 0.00 39.23 1.94
1963 1998 0.035152 TTGGCACTAGGGACATGCAG 60.035 55.000 0.00 0.00 41.27 4.41
1999 2035 5.182950 TGGTTGTCAATGGTAATGTGATGAC 59.817 40.000 0.00 0.00 38.08 3.06
2005 2041 6.418057 AAACATGGTTGTCAATGGTAATGT 57.582 33.333 0.00 0.00 34.06 2.71
2021 2057 6.457355 TGGATGAAACTCAATGAAAACATGG 58.543 36.000 0.00 0.00 0.00 3.66
2060 2098 3.432186 CCTTCTTCGTGGCATGATCCTTA 60.432 47.826 10.74 0.00 0.00 2.69
2069 2107 4.023450 CGATATAGTACCTTCTTCGTGGCA 60.023 45.833 0.00 0.00 0.00 4.92
2119 2157 3.513912 TCTTCTAAGCTCCGGAATCAACA 59.486 43.478 5.23 0.00 0.00 3.33
2138 2176 7.397192 ACACCATAGGCTTGTTTATTGAATCTT 59.603 33.333 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.