Multiple sequence alignment - TraesCS5B01G464600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G464600 chr5B 100.000 7635 0 0 1 7635 639156073 639148439 0.000000e+00 14100.0
1 TraesCS5B01G464600 chr5B 96.875 32 1 0 6907 6938 472530870 472530839 4.000000e-03 54.7
2 TraesCS5B01G464600 chr5D 94.380 4840 171 36 1961 6715 507882310 507887133 0.000000e+00 7337.0
3 TraesCS5B01G464600 chr5D 91.684 986 47 12 1079 2052 419085323 419084361 0.000000e+00 1334.0
4 TraesCS5B01G464600 chr5D 84.996 1313 95 52 707 1959 507881002 507882272 0.000000e+00 1240.0
5 TraesCS5B01G464600 chr5D 84.175 1327 92 48 1123 2352 30066818 30065513 0.000000e+00 1179.0
6 TraesCS5B01G464600 chr5D 83.413 832 70 21 6713 7522 507887203 507887988 0.000000e+00 710.0
7 TraesCS5B01G464600 chr5D 83.493 418 42 13 106 518 507880305 507880700 1.570000e-96 364.0
8 TraesCS5B01G464600 chr5A 95.197 2061 51 16 3069 5113 635498777 635500805 0.000000e+00 3214.0
9 TraesCS5B01G464600 chr5A 93.051 1583 84 10 5157 6715 635501092 635502672 0.000000e+00 2290.0
10 TraesCS5B01G464600 chr5A 90.772 997 49 22 1961 2917 635497363 635498356 0.000000e+00 1291.0
11 TraesCS5B01G464600 chr5A 87.982 674 44 23 1123 1775 635496450 635497107 0.000000e+00 761.0
12 TraesCS5B01G464600 chr5A 78.928 541 45 26 6716 7223 635502738 635503242 3.460000e-78 303.0
13 TraesCS5B01G464600 chr5A 85.417 288 39 3 7236 7522 10859694 10859409 5.790000e-76 296.0
14 TraesCS5B01G464600 chr5A 90.000 200 13 4 1762 1959 635497128 635497322 1.270000e-62 252.0
15 TraesCS5B01G464600 chr5A 97.183 142 4 0 2911 3052 635498549 635498690 2.750000e-59 241.0
16 TraesCS5B01G464600 chr5A 86.301 219 19 2 2539 2757 693358860 693358653 2.140000e-55 228.0
17 TraesCS5B01G464600 chr5A 88.060 134 7 3 938 1062 635496232 635496365 4.770000e-32 150.0
18 TraesCS5B01G464600 chr5A 97.143 35 0 1 2123 2157 693358947 693358914 2.980000e-04 58.4
19 TraesCS5B01G464600 chr3B 90.860 919 59 12 1079 1994 767724866 767725762 0.000000e+00 1208.0
20 TraesCS5B01G464600 chr3B 90.117 941 62 13 1079 2010 767737973 767738891 0.000000e+00 1194.0
21 TraesCS5B01G464600 chr3B 97.849 93 2 0 524 616 309387443 309387351 2.200000e-35 161.0
22 TraesCS5B01G464600 chr7D 88.971 272 26 4 7254 7522 60437527 60437257 4.420000e-87 333.0
23 TraesCS5B01G464600 chr4A 87.234 282 34 2 7242 7522 595849097 595849377 3.440000e-83 320.0
24 TraesCS5B01G464600 chr4A 86.667 285 35 3 7240 7522 146758578 146758295 5.750000e-81 313.0
25 TraesCS5B01G464600 chr4A 86.071 280 37 2 7244 7522 17248099 17247821 4.480000e-77 300.0
26 TraesCS5B01G464600 chr4A 97.849 93 2 0 524 616 670559582 670559674 2.200000e-35 161.0
27 TraesCS5B01G464600 chr1D 86.738 279 35 2 7242 7519 290446041 290446318 7.440000e-80 309.0
28 TraesCS5B01G464600 chr3A 86.429 280 36 2 7244 7522 697523373 697523095 9.630000e-79 305.0
29 TraesCS5B01G464600 chr7A 86.380 279 35 3 7246 7522 230300941 230300664 1.250000e-77 302.0
30 TraesCS5B01G464600 chr6A 86.594 276 33 3 7246 7519 322165746 322166019 1.250000e-77 302.0
31 TraesCS5B01G464600 chr6B 87.940 199 14 2 2559 2757 667901884 667902072 7.710000e-55 226.0
32 TraesCS5B01G464600 chr6B 87.310 197 15 2 2561 2757 558909195 558909009 4.640000e-52 217.0
33 TraesCS5B01G464600 chr6B 97.143 35 0 1 2123 2157 667901424 667901457 2.980000e-04 58.4
34 TraesCS5B01G464600 chr1B 92.466 146 11 0 2612 2757 22645776 22645631 7.760000e-50 209.0
35 TraesCS5B01G464600 chr4B 98.936 94 1 0 524 617 536845315 536845222 1.320000e-37 169.0
36 TraesCS5B01G464600 chr4B 96.040 101 3 1 524 624 665293911 665293812 6.130000e-36 163.0
37 TraesCS5B01G464600 chrUn 97.849 93 2 0 524 616 50438244 50438336 2.200000e-35 161.0
38 TraesCS5B01G464600 chrUn 97.849 93 2 0 524 616 263185387 263185295 2.200000e-35 161.0
39 TraesCS5B01G464600 chr2B 97.849 93 2 0 524 616 452910270 452910178 2.200000e-35 161.0
40 TraesCS5B01G464600 chr2B 97.849 93 2 0 524 616 776456941 776457033 2.200000e-35 161.0
41 TraesCS5B01G464600 chr1A 84.756 164 15 2 2559 2722 479639699 479639852 1.030000e-33 156.0
42 TraesCS5B01G464600 chr3D 89.831 118 7 3 524 637 458887260 458887144 6.170000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G464600 chr5B 639148439 639156073 7634 True 14100.00 14100 100.000000 1 7635 1 chr5B.!!$R2 7634
1 TraesCS5B01G464600 chr5D 507880305 507887988 7683 False 2412.75 7337 86.570500 106 7522 4 chr5D.!!$F1 7416
2 TraesCS5B01G464600 chr5D 419084361 419085323 962 True 1334.00 1334 91.684000 1079 2052 1 chr5D.!!$R2 973
3 TraesCS5B01G464600 chr5D 30065513 30066818 1305 True 1179.00 1179 84.175000 1123 2352 1 chr5D.!!$R1 1229
4 TraesCS5B01G464600 chr5A 635496232 635503242 7010 False 1062.75 3214 90.146625 938 7223 8 chr5A.!!$F1 6285
5 TraesCS5B01G464600 chr3B 767724866 767725762 896 False 1208.00 1208 90.860000 1079 1994 1 chr3B.!!$F1 915
6 TraesCS5B01G464600 chr3B 767737973 767738891 918 False 1194.00 1194 90.117000 1079 2010 1 chr3B.!!$F2 931

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
85 86 0.032267 GATGCAGGTAGACGGTAGGC 59.968 60.000 0.00 0.00 0.00 3.93 F
725 873 0.035152 TCGCTCCAAGTGGATTGCAT 60.035 50.000 11.01 0.00 44.46 3.96 F
1070 1239 0.109226 GTTCCTGCTCGTAGCTTCGT 60.109 55.000 12.66 0.00 42.97 3.85 F
1071 1240 0.109272 TTCCTGCTCGTAGCTTCGTG 60.109 55.000 12.66 11.26 42.97 4.35 F
2573 3041 0.502695 GCTTTCTTTTCCGCGTTTGC 59.497 50.000 4.92 0.00 37.91 3.68 F
3696 4459 2.892852 TCCAATCCTTTCACCTTTGCTG 59.107 45.455 0.00 0.00 0.00 4.41 F
3914 4679 3.254166 ACATGTCAGCATTGAAGGACAAC 59.746 43.478 0.00 0.00 42.83 3.32 F
5656 6693 3.643792 AGATTTAGGGATCGCAGCTTAGT 59.356 43.478 12.83 0.00 0.00 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2017 2422 0.106708 AATGATCGATGTGTCCCCCG 59.893 55.000 0.54 0.0 0.00 5.73 R
2308 2775 3.611766 ACCACCTGGAAGAAATACTCG 57.388 47.619 0.00 0.0 38.94 4.18 R
2534 3001 4.695396 AGCTTCATTTGCAACATGTGAAA 58.305 34.783 0.00 0.0 0.00 2.69 R
3365 4111 9.846248 ATAGTTCAAGTACAGAAATTTGATTGC 57.154 29.630 0.00 0.0 30.45 3.56 R
4346 5124 3.329520 TCCACTAGCAAGGGTACAAATGT 59.670 43.478 0.00 0.0 0.00 2.71 R
5357 6392 0.884704 GGTTGCGCTCAGGTCAGAAA 60.885 55.000 9.73 0.0 0.00 2.52 R
5694 6731 2.159142 CCCATCATCTTGAAGCAAAGCC 60.159 50.000 0.00 0.0 0.00 4.35 R
7135 8336 0.038166 CCTTCCCCTGCTAAGTTGCA 59.962 55.000 0.00 0.0 41.05 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.953466 TTTCGGACGGAGGAAGTATG 57.047 50.000 0.00 0.00 0.00 2.39
21 22 2.133281 TTCGGACGGAGGAAGTATGA 57.867 50.000 0.00 0.00 0.00 2.15
22 23 1.676746 TCGGACGGAGGAAGTATGAG 58.323 55.000 0.00 0.00 0.00 2.90
23 24 1.211212 TCGGACGGAGGAAGTATGAGA 59.789 52.381 0.00 0.00 0.00 3.27
24 25 2.158652 TCGGACGGAGGAAGTATGAGAT 60.159 50.000 0.00 0.00 0.00 2.75
25 26 3.072038 TCGGACGGAGGAAGTATGAGATA 59.928 47.826 0.00 0.00 0.00 1.98
26 27 3.188873 CGGACGGAGGAAGTATGAGATAC 59.811 52.174 0.00 0.00 35.99 2.24
27 28 3.506844 GGACGGAGGAAGTATGAGATACC 59.493 52.174 0.00 0.00 36.40 2.73
28 29 4.142790 GACGGAGGAAGTATGAGATACCA 58.857 47.826 0.00 0.00 36.40 3.25
29 30 4.742012 ACGGAGGAAGTATGAGATACCAT 58.258 43.478 0.00 0.00 36.40 3.55
30 31 4.524714 ACGGAGGAAGTATGAGATACCATG 59.475 45.833 0.00 0.00 36.40 3.66
31 32 4.524714 CGGAGGAAGTATGAGATACCATGT 59.475 45.833 0.00 0.00 36.40 3.21
32 33 5.565637 CGGAGGAAGTATGAGATACCATGTG 60.566 48.000 0.00 0.00 36.40 3.21
33 34 5.279708 GGAGGAAGTATGAGATACCATGTGG 60.280 48.000 0.00 0.00 42.17 4.17
34 35 4.040952 AGGAAGTATGAGATACCATGTGGC 59.959 45.833 0.00 0.00 39.32 5.01
35 36 3.667497 AGTATGAGATACCATGTGGCG 57.333 47.619 0.00 0.00 39.32 5.69
36 37 2.965831 AGTATGAGATACCATGTGGCGT 59.034 45.455 0.00 0.00 39.32 5.68
37 38 4.149598 AGTATGAGATACCATGTGGCGTA 58.850 43.478 0.00 0.00 39.32 4.42
38 39 2.882927 TGAGATACCATGTGGCGTAC 57.117 50.000 0.00 0.00 39.32 3.67
39 40 1.066454 TGAGATACCATGTGGCGTACG 59.934 52.381 11.84 11.84 39.32 3.67
40 41 0.387929 AGATACCATGTGGCGTACGG 59.612 55.000 18.39 0.23 39.32 4.02
41 42 0.599204 GATACCATGTGGCGTACGGG 60.599 60.000 18.39 10.84 39.32 5.28
42 43 2.653953 ATACCATGTGGCGTACGGGC 62.654 60.000 18.39 10.62 39.32 6.13
43 44 4.467084 CCATGTGGCGTACGGGCT 62.467 66.667 18.39 0.00 42.84 5.19
44 45 3.195002 CATGTGGCGTACGGGCTG 61.195 66.667 18.39 0.00 42.84 4.85
45 46 3.702048 ATGTGGCGTACGGGCTGT 61.702 61.111 18.39 3.57 42.84 4.40
46 47 3.950794 ATGTGGCGTACGGGCTGTG 62.951 63.158 18.39 0.00 42.84 3.66
63 64 3.967335 GCCTCGCCGAGTCGCTAT 61.967 66.667 13.83 0.00 0.00 2.97
64 65 2.050895 CCTCGCCGAGTCGCTATG 60.051 66.667 13.83 0.00 0.00 2.23
65 66 2.050895 CTCGCCGAGTCGCTATGG 60.051 66.667 7.12 0.00 0.00 2.74
66 67 3.544167 CTCGCCGAGTCGCTATGGG 62.544 68.421 7.12 2.00 0.00 4.00
67 68 3.592814 CGCCGAGTCGCTATGGGA 61.593 66.667 7.12 0.00 0.00 4.37
68 69 2.920645 CGCCGAGTCGCTATGGGAT 61.921 63.158 7.12 0.00 0.00 3.85
69 70 1.373497 GCCGAGTCGCTATGGGATG 60.373 63.158 7.12 0.00 0.00 3.51
70 71 1.373497 CCGAGTCGCTATGGGATGC 60.373 63.158 7.12 0.00 0.00 3.91
71 72 1.363807 CGAGTCGCTATGGGATGCA 59.636 57.895 0.00 0.00 0.00 3.96
72 73 0.665670 CGAGTCGCTATGGGATGCAG 60.666 60.000 0.00 0.00 0.00 4.41
73 74 0.320247 GAGTCGCTATGGGATGCAGG 60.320 60.000 0.00 0.00 0.00 4.85
74 75 1.050988 AGTCGCTATGGGATGCAGGT 61.051 55.000 0.00 0.00 0.00 4.00
75 76 0.679505 GTCGCTATGGGATGCAGGTA 59.320 55.000 0.00 0.00 0.00 3.08
76 77 0.969149 TCGCTATGGGATGCAGGTAG 59.031 55.000 0.00 0.00 0.00 3.18
77 78 0.969149 CGCTATGGGATGCAGGTAGA 59.031 55.000 0.00 0.00 0.00 2.59
78 79 1.337260 CGCTATGGGATGCAGGTAGAC 60.337 57.143 0.00 0.00 0.00 2.59
79 80 1.337260 GCTATGGGATGCAGGTAGACG 60.337 57.143 0.00 0.00 0.00 4.18
80 81 1.273606 CTATGGGATGCAGGTAGACGG 59.726 57.143 0.00 0.00 0.00 4.79
81 82 0.691078 ATGGGATGCAGGTAGACGGT 60.691 55.000 0.00 0.00 0.00 4.83
82 83 0.032912 TGGGATGCAGGTAGACGGTA 60.033 55.000 0.00 0.00 0.00 4.02
83 84 0.674534 GGGATGCAGGTAGACGGTAG 59.325 60.000 0.00 0.00 0.00 3.18
84 85 0.674534 GGATGCAGGTAGACGGTAGG 59.325 60.000 0.00 0.00 0.00 3.18
85 86 0.032267 GATGCAGGTAGACGGTAGGC 59.968 60.000 0.00 0.00 0.00 3.93
86 87 1.400530 ATGCAGGTAGACGGTAGGCC 61.401 60.000 0.00 0.00 0.00 5.19
101 102 2.900273 GCCGGTCAGCCATAGTGA 59.100 61.111 1.90 0.00 34.09 3.41
102 103 1.220749 GCCGGTCAGCCATAGTGAA 59.779 57.895 1.90 0.00 34.09 3.18
103 104 0.179045 GCCGGTCAGCCATAGTGAAT 60.179 55.000 1.90 0.00 34.09 2.57
104 105 1.586422 CCGGTCAGCCATAGTGAATG 58.414 55.000 0.00 0.00 35.15 2.67
118 119 2.301870 AGTGAATGCGTGGAGAGGTTTA 59.698 45.455 0.00 0.00 0.00 2.01
137 139 0.476771 ATTTGGTGGGTTCGGTCTGT 59.523 50.000 0.00 0.00 0.00 3.41
143 145 1.671379 GGGTTCGGTCTGTTGGAGC 60.671 63.158 0.00 0.00 38.91 4.70
149 151 1.867919 CGGTCTGTTGGAGCTCGACT 61.868 60.000 16.73 0.00 40.01 4.18
161 163 1.086634 GCTCGACTTGGCAGACATCC 61.087 60.000 0.00 0.00 0.00 3.51
162 164 0.803768 CTCGACTTGGCAGACATCCG 60.804 60.000 0.00 0.00 0.00 4.18
164 166 1.450312 GACTTGGCAGACATCCGGG 60.450 63.158 0.00 0.00 0.00 5.73
168 170 2.044946 GGCAGACATCCGGGCTTT 60.045 61.111 0.00 0.00 32.98 3.51
171 173 0.109132 GCAGACATCCGGGCTTTTTG 60.109 55.000 0.00 0.00 0.00 2.44
176 178 1.015607 CATCCGGGCTTTTTGCAAGC 61.016 55.000 0.00 0.00 45.15 4.01
187 189 5.820131 GCTTTTTGCAAGCCATTTTTAGTT 58.180 33.333 0.00 0.00 42.31 2.24
196 198 7.877097 TGCAAGCCATTTTTAGTTATGAAACAT 59.123 29.630 0.00 0.00 38.12 2.71
210 216 9.226606 AGTTATGAAACATTTTAATCCACGAGA 57.773 29.630 0.00 0.00 38.12 4.04
215 221 9.004717 TGAAACATTTTAATCCACGAGATTGTA 57.995 29.630 13.37 2.25 45.11 2.41
227 233 3.103738 CGAGATTGTAAGCAATGCAAGC 58.896 45.455 8.35 6.40 44.61 4.01
237 243 2.489329 AGCAATGCAAGCTCGTTATGTT 59.511 40.909 8.35 0.00 38.01 2.71
238 244 2.848302 GCAATGCAAGCTCGTTATGTTC 59.152 45.455 0.00 0.00 0.00 3.18
251 257 4.512198 TCGTTATGTTCTTCCTTTTTGCGA 59.488 37.500 0.00 0.00 0.00 5.10
263 269 6.385649 TCCTTTTTGCGAGATAAGTTTGTT 57.614 33.333 0.00 0.00 0.00 2.83
264 270 6.801575 TCCTTTTTGCGAGATAAGTTTGTTT 58.198 32.000 0.00 0.00 0.00 2.83
265 271 6.915843 TCCTTTTTGCGAGATAAGTTTGTTTC 59.084 34.615 0.00 0.00 0.00 2.78
266 272 6.695278 CCTTTTTGCGAGATAAGTTTGTTTCA 59.305 34.615 0.00 0.00 0.00 2.69
267 273 7.305993 CCTTTTTGCGAGATAAGTTTGTTTCAC 60.306 37.037 0.00 0.00 0.00 3.18
268 274 4.742438 TGCGAGATAAGTTTGTTTCACC 57.258 40.909 0.00 0.00 0.00 4.02
269 275 3.500680 TGCGAGATAAGTTTGTTTCACCC 59.499 43.478 0.00 0.00 0.00 4.61
270 276 3.424433 GCGAGATAAGTTTGTTTCACCCG 60.424 47.826 0.00 0.00 0.00 5.28
271 277 3.744426 CGAGATAAGTTTGTTTCACCCGT 59.256 43.478 0.00 0.00 0.00 5.28
274 280 6.073657 CGAGATAAGTTTGTTTCACCCGTAAA 60.074 38.462 0.00 0.00 0.00 2.01
275 281 7.518689 CGAGATAAGTTTGTTTCACCCGTAAAA 60.519 37.037 0.00 0.00 0.00 1.52
276 282 7.998580 AGATAAGTTTGTTTCACCCGTAAAAA 58.001 30.769 0.00 0.00 0.00 1.94
336 342 2.157085 GTCCGAATCACACGTTTTCTCC 59.843 50.000 0.00 0.00 0.00 3.71
340 346 1.148310 ATCACACGTTTTCTCCGCAG 58.852 50.000 0.00 0.00 0.00 5.18
363 369 2.040412 ACCTCTGAACCCACAGGAATTC 59.960 50.000 0.00 0.00 38.31 2.17
371 377 2.154462 CCCACAGGAATTCACACAGAC 58.846 52.381 7.93 0.00 33.47 3.51
374 380 2.733552 CACAGGAATTCACACAGACGAG 59.266 50.000 7.93 0.00 0.00 4.18
375 381 2.289072 ACAGGAATTCACACAGACGAGG 60.289 50.000 7.93 0.00 0.00 4.63
377 383 1.079503 GAATTCACACAGACGAGGCC 58.920 55.000 0.00 0.00 0.00 5.19
439 445 0.320421 AAACAGCACGCCGTACTCAT 60.320 50.000 0.00 0.00 0.00 2.90
440 446 0.736325 AACAGCACGCCGTACTCATC 60.736 55.000 0.00 0.00 0.00 2.92
441 447 1.153842 CAGCACGCCGTACTCATCA 60.154 57.895 0.00 0.00 0.00 3.07
442 448 1.139734 AGCACGCCGTACTCATCAG 59.860 57.895 0.00 0.00 0.00 2.90
468 474 4.765856 GGAAGATTATCCTAGCACCGACTA 59.234 45.833 0.00 0.00 36.50 2.59
498 504 3.575805 GGATTATCATCCTGCCCCAAAA 58.424 45.455 0.00 0.00 45.41 2.44
500 506 4.039609 GGATTATCATCCTGCCCCAAAAAG 59.960 45.833 0.00 0.00 45.41 2.27
518 524 6.335777 CAAAAAGAAGATTATCCTGGCAAGG 58.664 40.000 0.00 0.00 46.06 3.61
527 533 4.941609 CTGGCAAGGACACGCTAT 57.058 55.556 0.00 0.00 0.00 2.97
529 535 0.176680 CTGGCAAGGACACGCTATCT 59.823 55.000 0.00 0.00 0.00 1.98
530 536 0.613260 TGGCAAGGACACGCTATCTT 59.387 50.000 0.00 0.00 0.00 2.40
531 537 1.003118 TGGCAAGGACACGCTATCTTT 59.997 47.619 0.00 0.00 0.00 2.52
532 538 2.084546 GGCAAGGACACGCTATCTTTT 58.915 47.619 0.00 0.00 0.00 2.27
535 541 3.181516 GCAAGGACACGCTATCTTTTCAG 60.182 47.826 0.00 0.00 0.00 3.02
536 542 3.963428 AGGACACGCTATCTTTTCAGT 57.037 42.857 0.00 0.00 0.00 3.41
537 543 4.273148 AGGACACGCTATCTTTTCAGTT 57.727 40.909 0.00 0.00 0.00 3.16
538 544 4.642429 AGGACACGCTATCTTTTCAGTTT 58.358 39.130 0.00 0.00 0.00 2.66
540 546 5.049405 AGGACACGCTATCTTTTCAGTTTTG 60.049 40.000 0.00 0.00 0.00 2.44
542 548 5.748592 ACACGCTATCTTTTCAGTTTTGTC 58.251 37.500 0.00 0.00 0.00 3.18
543 549 5.295787 ACACGCTATCTTTTCAGTTTTGTCA 59.704 36.000 0.00 0.00 0.00 3.58
545 551 6.303970 CACGCTATCTTTTCAGTTTTGTCATG 59.696 38.462 0.00 0.00 0.00 3.07
546 552 6.017109 ACGCTATCTTTTCAGTTTTGTCATGT 60.017 34.615 0.00 0.00 0.00 3.21
547 553 6.521133 CGCTATCTTTTCAGTTTTGTCATGTC 59.479 38.462 0.00 0.00 0.00 3.06
548 554 6.521133 GCTATCTTTTCAGTTTTGTCATGTCG 59.479 38.462 0.00 0.00 0.00 4.35
550 556 4.638421 TCTTTTCAGTTTTGTCATGTCGGT 59.362 37.500 0.00 0.00 0.00 4.69
551 557 4.974368 TTTCAGTTTTGTCATGTCGGTT 57.026 36.364 0.00 0.00 0.00 4.44
552 558 4.545823 TTCAGTTTTGTCATGTCGGTTC 57.454 40.909 0.00 0.00 0.00 3.62
553 559 3.804036 TCAGTTTTGTCATGTCGGTTCT 58.196 40.909 0.00 0.00 0.00 3.01
555 561 5.361427 TCAGTTTTGTCATGTCGGTTCTTA 58.639 37.500 0.00 0.00 0.00 2.10
556 562 5.235616 TCAGTTTTGTCATGTCGGTTCTTAC 59.764 40.000 0.00 0.00 0.00 2.34
557 563 4.210537 AGTTTTGTCATGTCGGTTCTTACG 59.789 41.667 0.00 0.00 0.00 3.18
558 564 3.374220 TTGTCATGTCGGTTCTTACGT 57.626 42.857 0.00 0.00 0.00 3.57
559 565 2.668250 TGTCATGTCGGTTCTTACGTG 58.332 47.619 0.00 0.00 34.57 4.49
562 568 2.555325 TCATGTCGGTTCTTACGTGACT 59.445 45.455 0.00 0.00 36.86 3.41
563 569 3.005050 TCATGTCGGTTCTTACGTGACTT 59.995 43.478 0.00 0.00 36.86 3.01
565 571 2.099592 TGTCGGTTCTTACGTGACTTGT 59.900 45.455 0.00 0.00 33.76 3.16
568 574 3.565482 TCGGTTCTTACGTGACTTGTACT 59.435 43.478 0.00 0.00 0.00 2.73
570 576 4.741676 CGGTTCTTACGTGACTTGTACTTT 59.258 41.667 0.00 0.00 0.00 2.66
572 578 5.521372 GGTTCTTACGTGACTTGTACTTTGT 59.479 40.000 0.00 0.00 0.00 2.83
573 579 6.036408 GGTTCTTACGTGACTTGTACTTTGTT 59.964 38.462 0.00 0.00 0.00 2.83
574 580 6.817270 TCTTACGTGACTTGTACTTTGTTC 57.183 37.500 0.00 0.00 0.00 3.18
575 581 6.567050 TCTTACGTGACTTGTACTTTGTTCT 58.433 36.000 0.00 0.00 0.00 3.01
576 582 7.037438 TCTTACGTGACTTGTACTTTGTTCTT 58.963 34.615 0.00 0.00 0.00 2.52
577 583 7.546667 TCTTACGTGACTTGTACTTTGTTCTTT 59.453 33.333 0.00 0.00 0.00 2.52
578 584 8.700722 TTACGTGACTTGTACTTTGTTCTTTA 57.299 30.769 0.00 0.00 0.00 1.85
579 585 7.781548 ACGTGACTTGTACTTTGTTCTTTAT 57.218 32.000 0.00 0.00 0.00 1.40
580 586 7.627340 ACGTGACTTGTACTTTGTTCTTTATG 58.373 34.615 0.00 0.00 0.00 1.90
581 587 7.493320 ACGTGACTTGTACTTTGTTCTTTATGA 59.507 33.333 0.00 0.00 0.00 2.15
582 588 8.495949 CGTGACTTGTACTTTGTTCTTTATGAT 58.504 33.333 0.00 0.00 0.00 2.45
608 614 7.533289 TGAATGAGATACGTATTACCATGGA 57.467 36.000 21.47 0.00 0.00 3.41
609 615 7.958088 TGAATGAGATACGTATTACCATGGAA 58.042 34.615 21.47 8.96 0.00 3.53
610 616 8.425703 TGAATGAGATACGTATTACCATGGAAA 58.574 33.333 21.47 2.58 0.00 3.13
611 617 9.268268 GAATGAGATACGTATTACCATGGAAAA 57.732 33.333 21.47 12.75 0.00 2.29
612 618 9.621629 AATGAGATACGTATTACCATGGAAAAA 57.378 29.630 21.47 10.04 0.00 1.94
629 635 2.159181 AAAAATCGGTCGCTGGTCG 58.841 52.632 0.00 0.00 40.15 4.79
630 636 1.296056 AAAAATCGGTCGCTGGTCGG 61.296 55.000 0.00 0.00 39.05 4.79
631 637 4.814294 AATCGGTCGCTGGTCGGC 62.814 66.667 0.00 0.00 43.18 5.54
653 801 1.521457 GCTGACCGGATGCGATCAA 60.521 57.895 9.46 0.00 0.00 2.57
660 808 2.247437 GGATGCGATCAACGGGCTC 61.247 63.158 0.00 0.00 42.83 4.70
664 812 2.180769 CGATCAACGGGCTCGACA 59.819 61.111 15.95 0.00 40.11 4.35
667 815 1.369625 GATCAACGGGCTCGACAAAT 58.630 50.000 15.95 0.00 40.11 2.32
669 817 0.320374 TCAACGGGCTCGACAAATCT 59.680 50.000 15.95 0.00 40.11 2.40
670 818 0.721718 CAACGGGCTCGACAAATCTC 59.278 55.000 15.95 0.00 40.11 2.75
671 819 0.391263 AACGGGCTCGACAAATCTCC 60.391 55.000 15.95 0.00 40.11 3.71
672 820 1.258445 ACGGGCTCGACAAATCTCCT 61.258 55.000 15.95 0.00 40.11 3.69
673 821 0.528684 CGGGCTCGACAAATCTCCTC 60.529 60.000 0.00 0.00 39.00 3.71
674 822 0.827368 GGGCTCGACAAATCTCCTCT 59.173 55.000 0.00 0.00 0.00 3.69
675 823 1.202475 GGGCTCGACAAATCTCCTCTC 60.202 57.143 0.00 0.00 0.00 3.20
676 824 1.202475 GGCTCGACAAATCTCCTCTCC 60.202 57.143 0.00 0.00 0.00 3.71
677 825 1.535015 GCTCGACAAATCTCCTCTCCG 60.535 57.143 0.00 0.00 0.00 4.63
678 826 1.066303 CTCGACAAATCTCCTCTCCGG 59.934 57.143 0.00 0.00 0.00 5.14
679 827 0.818296 CGACAAATCTCCTCTCCGGT 59.182 55.000 0.00 0.00 0.00 5.28
680 828 1.469940 CGACAAATCTCCTCTCCGGTG 60.470 57.143 0.00 0.00 0.00 4.94
681 829 0.250513 ACAAATCTCCTCTCCGGTGC 59.749 55.000 0.00 0.00 0.00 5.01
682 830 0.807667 CAAATCTCCTCTCCGGTGCG 60.808 60.000 0.00 0.00 0.00 5.34
720 868 2.990479 GGGTCGCTCCAAGTGGAT 59.010 61.111 0.00 0.00 44.46 3.41
721 869 1.299976 GGGTCGCTCCAAGTGGATT 59.700 57.895 0.00 0.00 44.46 3.01
722 870 1.026718 GGGTCGCTCCAAGTGGATTG 61.027 60.000 0.00 0.00 44.46 2.67
723 871 1.648467 GGTCGCTCCAAGTGGATTGC 61.648 60.000 0.00 1.00 44.46 3.56
724 872 0.955428 GTCGCTCCAAGTGGATTGCA 60.955 55.000 11.01 0.00 44.46 4.08
725 873 0.035152 TCGCTCCAAGTGGATTGCAT 60.035 50.000 11.01 0.00 44.46 3.96
734 882 4.464262 GGATTGCATCCCGAGTCC 57.536 61.111 0.00 0.00 43.88 3.85
736 884 1.595382 GATTGCATCCCGAGTCCCG 60.595 63.158 0.00 0.00 38.18 5.14
746 903 2.365105 GAGTCCCGGGTCCATCCA 60.365 66.667 22.86 0.00 38.11 3.41
752 909 3.402681 CGGGTCCATCCAGCCAGT 61.403 66.667 0.00 0.00 38.11 4.00
753 910 2.063979 CGGGTCCATCCAGCCAGTA 61.064 63.158 0.00 0.00 38.11 2.74
754 911 1.832912 GGGTCCATCCAGCCAGTAG 59.167 63.158 0.00 0.00 38.11 2.57
755 912 1.700042 GGGTCCATCCAGCCAGTAGG 61.700 65.000 0.00 0.00 38.11 3.18
761 918 0.692419 ATCCAGCCAGTAGGACCAGG 60.692 60.000 0.00 0.00 36.60 4.45
770 927 1.563410 AGTAGGACCAGGCGTAGTAGT 59.437 52.381 0.00 0.00 0.00 2.73
771 928 2.774234 AGTAGGACCAGGCGTAGTAGTA 59.226 50.000 0.00 0.00 0.00 1.82
773 930 4.594920 AGTAGGACCAGGCGTAGTAGTATA 59.405 45.833 0.00 0.00 0.00 1.47
785 943 5.128919 CGTAGTAGTATAACTCCAGTGGGT 58.871 45.833 9.92 3.18 34.93 4.51
788 946 2.760581 AGTATAACTCCAGTGGGTCCC 58.239 52.381 9.92 0.00 34.93 4.46
789 947 2.045326 AGTATAACTCCAGTGGGTCCCA 59.955 50.000 6.47 6.47 34.93 4.37
794 952 2.244117 CTCCAGTGGGTCCCATCACG 62.244 65.000 15.49 2.86 38.77 4.35
805 963 4.082523 CATCACGACGTGGGGGCT 62.083 66.667 26.55 5.30 33.87 5.19
886 1044 4.101077 CCTCCCCTGCTCCCCTCT 62.101 72.222 0.00 0.00 0.00 3.69
921 1079 4.680237 TGCGGGCAAGTCACCTCG 62.680 66.667 0.00 0.00 0.00 4.63
982 1142 2.289506 GGATAAATAGAGGACCGGGCAC 60.290 54.545 11.00 1.64 0.00 5.01
1047 1216 4.530857 GCAGCGCCTCGGTACCAT 62.531 66.667 13.54 0.00 35.27 3.55
1053 1222 2.493030 CCTCGGTACCATCGCGTT 59.507 61.111 13.54 0.00 0.00 4.84
1063 1232 1.226575 CATCGCGTTCCTGCTCGTA 60.227 57.895 5.77 0.00 0.00 3.43
1064 1233 1.064296 ATCGCGTTCCTGCTCGTAG 59.936 57.895 5.77 0.00 0.00 3.51
1065 1234 2.938539 ATCGCGTTCCTGCTCGTAGC 62.939 60.000 5.77 0.58 42.82 3.58
1066 1235 2.182030 GCGTTCCTGCTCGTAGCT 59.818 61.111 8.07 0.00 42.97 3.32
1067 1236 1.446272 GCGTTCCTGCTCGTAGCTT 60.446 57.895 0.00 0.00 42.97 3.74
1068 1237 1.414527 GCGTTCCTGCTCGTAGCTTC 61.415 60.000 0.00 0.00 42.97 3.86
1069 1238 1.134530 CGTTCCTGCTCGTAGCTTCG 61.135 60.000 6.38 6.38 42.97 3.79
1070 1239 0.109226 GTTCCTGCTCGTAGCTTCGT 60.109 55.000 12.66 0.00 42.97 3.85
1071 1240 0.109272 TTCCTGCTCGTAGCTTCGTG 60.109 55.000 12.66 11.26 42.97 4.35
1072 1241 1.213013 CCTGCTCGTAGCTTCGTGT 59.787 57.895 12.66 0.00 42.97 4.49
1073 1242 0.798771 CCTGCTCGTAGCTTCGTGTC 60.799 60.000 12.66 7.31 42.97 3.67
1074 1243 0.798771 CTGCTCGTAGCTTCGTGTCC 60.799 60.000 12.66 0.00 42.97 4.02
1317 1545 1.439228 GCTCGTCATCCAGCAGCTA 59.561 57.895 0.00 0.00 35.56 3.32
1323 1551 3.174265 ATCCAGCAGCTAGGCCCC 61.174 66.667 0.00 0.00 0.00 5.80
1356 1584 1.060308 CGTAAGCACGCAATTCCCG 59.940 57.895 0.00 0.00 42.05 5.14
1419 1670 7.254387 CCGAATCTCTGAAATCTCTGAAACATC 60.254 40.741 0.00 0.00 0.00 3.06
1529 1780 2.548067 CCTTATTACCCCTGCTACTGCG 60.548 54.545 0.00 0.00 43.34 5.18
1534 1785 2.510238 CCCTGCTACTGCGCACTC 60.510 66.667 5.66 0.00 43.34 3.51
1550 1806 4.350346 CGCACTCTGTTTGTTTGAATTCA 58.650 39.130 3.38 3.38 0.00 2.57
1575 1831 1.531883 GCCGCGTTTGATGGAATCTTC 60.532 52.381 4.92 0.00 45.81 2.87
1612 1890 3.751698 CGCTGCCTTCCTTTTTAGTACTT 59.248 43.478 0.00 0.00 0.00 2.24
1643 1929 1.532437 CTGTTTGCTCACTGCGATCAA 59.468 47.619 0.00 0.00 46.63 2.57
1644 1930 2.153645 TGTTTGCTCACTGCGATCAAT 58.846 42.857 0.00 0.00 46.63 2.57
1645 1931 3.333804 TGTTTGCTCACTGCGATCAATA 58.666 40.909 0.00 0.00 46.63 1.90
1646 1932 3.940852 TGTTTGCTCACTGCGATCAATAT 59.059 39.130 0.00 0.00 46.63 1.28
1767 2084 3.194329 TCATGTATGCATCCGATCTCTCC 59.806 47.826 0.19 0.00 31.99 3.71
1769 2086 1.205893 GTATGCATCCGATCTCTCCCC 59.794 57.143 0.19 0.00 0.00 4.81
1775 2096 1.228737 CCGATCTCTCCCCCTCTCC 60.229 68.421 0.00 0.00 0.00 3.71
1780 2101 2.850695 TCTCTCCCCCTCTCCTTAAC 57.149 55.000 0.00 0.00 0.00 2.01
1783 2104 3.181399 TCTCTCCCCCTCTCCTTAACAAA 60.181 47.826 0.00 0.00 0.00 2.83
1808 2129 2.288666 TGTCCTTGTGCTCAACTCAAC 58.711 47.619 0.00 0.00 0.00 3.18
1827 2160 4.572389 TCAACTGTGCTCTTCTTCTTGTTC 59.428 41.667 0.00 0.00 0.00 3.18
1840 2173 9.159364 TCTTCTTCTTGTTCATCTAATCATGTG 57.841 33.333 0.00 0.00 0.00 3.21
2017 2422 4.557301 CGTTGTTGTTTTGTCAAAGTCCTC 59.443 41.667 0.00 0.00 0.00 3.71
2030 2435 2.758327 TCCTCGGGGGACACATCG 60.758 66.667 0.00 0.00 39.58 3.84
2060 2468 3.660501 TCAGCACTGACGACACTTTAT 57.339 42.857 0.00 0.00 34.14 1.40
2061 2469 3.317150 TCAGCACTGACGACACTTTATG 58.683 45.455 0.00 0.00 34.14 1.90
2093 2509 7.073342 ACGCAAGACTTCTTTAAATATGGAC 57.927 36.000 0.00 0.00 43.62 4.02
2235 2702 3.123804 CAGTCGGATGTACTTGTATGCC 58.876 50.000 0.00 0.00 0.00 4.40
2290 2757 2.503356 AGCACTAGAGCTTATGCCAACT 59.497 45.455 9.06 0.00 43.70 3.16
2308 2775 5.381477 CCAACTTTTTGCTTGTTTTGTGTC 58.619 37.500 0.00 0.00 0.00 3.67
2336 2803 7.998964 AGTATTTCTTCCAGGTGGTATAAATGG 59.001 37.037 8.40 0.00 36.34 3.16
2534 3001 9.517868 AGGCTATTAAAGTCATCGTAGTAGTAT 57.482 33.333 0.00 0.00 29.52 2.12
2573 3041 0.502695 GCTTTCTTTTCCGCGTTTGC 59.497 50.000 4.92 0.00 37.91 3.68
2626 3094 6.330278 AGTGCAAGTAAGTTCTTTTGAAACC 58.670 36.000 0.00 0.00 40.53 3.27
2986 3662 7.717436 TGATGTACCACAAGAACTTTGATACAA 59.283 33.333 0.00 0.00 0.00 2.41
3103 3849 7.890127 TCATATTTTCTTTGGGTGTTGAGATCT 59.110 33.333 0.00 0.00 0.00 2.75
3365 4111 9.159364 GGTTTATTTCTACAGGTAGGTTTAGTG 57.841 37.037 6.62 0.00 34.06 2.74
3552 4299 7.549488 CCTCGGGAAATATGGAGTAAATATGTC 59.451 40.741 0.00 0.00 0.00 3.06
3582 4329 3.950397 TGAGGTACATCAACCCATCAAC 58.050 45.455 7.95 0.00 40.71 3.18
3686 4449 7.645058 TCTAAATGTCCAATCCAATCCTTTC 57.355 36.000 0.00 0.00 0.00 2.62
3694 4457 4.248058 CAATCCAATCCTTTCACCTTTGC 58.752 43.478 0.00 0.00 0.00 3.68
3696 4459 2.892852 TCCAATCCTTTCACCTTTGCTG 59.107 45.455 0.00 0.00 0.00 4.41
3723 4488 7.496346 AAGTCTACTCATCCCTTTATCACAA 57.504 36.000 0.00 0.00 0.00 3.33
3724 4489 6.879400 AGTCTACTCATCCCTTTATCACAAC 58.121 40.000 0.00 0.00 0.00 3.32
3914 4679 3.254166 ACATGTCAGCATTGAAGGACAAC 59.746 43.478 0.00 0.00 42.83 3.32
3963 4728 3.740115 CAGGTACACTGGTGCTAGTTTT 58.260 45.455 0.17 0.00 43.70 2.43
3976 4741 5.277828 GGTGCTAGTTTTTCCTGTTACAGTG 60.278 44.000 11.68 3.28 0.00 3.66
3997 4762 7.554835 ACAGTGTTCAGTTAAAATGTCCTGTTA 59.445 33.333 0.00 0.00 0.00 2.41
4064 4829 5.425539 ACACTGCCTAACAATCTAGTGGTAT 59.574 40.000 0.00 0.00 39.71 2.73
4135 4900 9.837525 GCCATGATTTATGATAATTGAGTCTTC 57.162 33.333 0.00 0.00 39.21 2.87
4206 4982 8.995027 ATTAAAGATAGGCATACCATGTTTGA 57.005 30.769 0.00 0.00 39.06 2.69
4305 5083 6.318648 TGATCTATACCAGCACACAATTTTCC 59.681 38.462 0.00 0.00 0.00 3.13
4401 5179 5.368256 ACTCAAGCTAGTTTTCAGCAATG 57.632 39.130 0.00 0.00 41.66 2.82
4536 5315 6.820470 TTTGCTTTGTTTTTACCATCTTCG 57.180 33.333 0.00 0.00 0.00 3.79
4701 5483 4.248174 TCAGATAATGGCAATTGGGACA 57.752 40.909 7.72 0.00 0.00 4.02
5109 5893 6.083098 TGACCATTCTTATTTTGTGTGTGG 57.917 37.500 0.00 0.00 0.00 4.17
5439 6476 8.986847 GTGATTGATGAGACAAAATCGATATCT 58.013 33.333 0.00 0.00 32.78 1.98
5656 6693 3.643792 AGATTTAGGGATCGCAGCTTAGT 59.356 43.478 12.83 0.00 0.00 2.24
5694 6731 3.629398 GCTCAGAAATCCATAAGTGGGTG 59.371 47.826 0.00 0.00 46.06 4.61
5715 6752 2.159142 GGCTTTGCTTCAAGATGATGGG 60.159 50.000 0.00 0.00 0.00 4.00
5794 6831 4.946157 ACCATCTGATAGTTTTGCTCCAAG 59.054 41.667 0.00 0.00 0.00 3.61
6035 7072 6.716628 AGAAGGTTTGTTGCATGATTTAGAGA 59.283 34.615 0.00 0.00 0.00 3.10
6065 7102 4.517952 ACTGCTGATATCTTCATCCTCG 57.482 45.455 3.98 0.00 32.72 4.63
6077 7114 2.102578 TCATCCTCGCTGATTGTCTGA 58.897 47.619 0.00 0.00 0.00 3.27
6109 7146 5.183228 GGGTTACGATCTGGAGAAATCAAA 58.817 41.667 0.00 0.00 0.00 2.69
6136 7173 3.070734 AGAATGCCTATGCTGGTGAGTAG 59.929 47.826 0.00 0.00 38.71 2.57
6138 7175 3.026707 TGCCTATGCTGGTGAGTAGTA 57.973 47.619 0.00 0.00 38.71 1.82
6200 7247 7.469260 TGTATATTTTTCTCAAGCCGCTTTAC 58.531 34.615 1.86 0.47 0.00 2.01
6223 7270 4.261909 CGTGTCATCCTCAGATCATGATCA 60.262 45.833 31.99 15.36 40.22 2.92
6231 7278 4.693095 CCTCAGATCATGATCATGCTTCTG 59.307 45.833 34.75 34.75 42.98 3.02
6320 7371 4.256180 GGCACCGCCTCCCCTATG 62.256 72.222 0.00 0.00 46.69 2.23
6326 7377 1.472662 CCGCCTCCCCTATGTGGTAG 61.473 65.000 0.00 0.00 0.00 3.18
6334 7387 2.732412 CCTATGTGGTAGGCTGATCG 57.268 55.000 0.00 0.00 43.44 3.69
6340 7393 0.174845 TGGTAGGCTGATCGGTTTCG 59.825 55.000 2.89 0.00 37.82 3.46
6351 7404 2.806608 TCGGTTTCGAGTAACAGCTT 57.193 45.000 2.63 0.00 40.88 3.74
6362 7415 6.097356 TCGAGTAACAGCTTGACGATATTTT 58.903 36.000 0.00 0.00 0.00 1.82
6368 7421 6.072112 ACAGCTTGACGATATTTTGTTTGT 57.928 33.333 0.00 0.00 0.00 2.83
6369 7422 5.914635 ACAGCTTGACGATATTTTGTTTGTG 59.085 36.000 0.00 0.00 0.00 3.33
6377 7430 8.079203 TGACGATATTTTGTTTGTGCTTAACAT 58.921 29.630 0.00 0.00 38.99 2.71
6379 7432 9.900710 ACGATATTTTGTTTGTGCTTAACATTA 57.099 25.926 0.00 0.00 38.99 1.90
6420 7473 2.867975 GTGTAGGTTTTGCACGTGTACT 59.132 45.455 18.38 8.51 32.68 2.73
6493 7548 2.030551 CTGGTGCCATGCATGCTAG 58.969 57.895 21.69 11.06 41.91 3.42
6621 7678 1.067635 GCGCCTTGGTTGTCAATGATT 60.068 47.619 0.00 0.00 34.45 2.57
6682 7739 3.910490 TTTTGCCGTGCCACCTGC 61.910 61.111 0.00 0.00 41.77 4.85
6726 7861 4.373156 ACAGGCTTGTCAAACTCCTTAT 57.627 40.909 0.00 0.00 29.46 1.73
6727 7862 5.499004 ACAGGCTTGTCAAACTCCTTATA 57.501 39.130 0.00 0.00 29.46 0.98
6732 7867 7.004691 AGGCTTGTCAAACTCCTTATAGTTTT 58.995 34.615 0.00 0.00 45.20 2.43
6733 7868 7.505923 AGGCTTGTCAAACTCCTTATAGTTTTT 59.494 33.333 0.00 0.00 45.20 1.94
6734 7869 7.808381 GGCTTGTCAAACTCCTTATAGTTTTTC 59.192 37.037 0.00 0.00 45.20 2.29
6965 8111 7.532571 TGTACTTTATGAATTTCGACTCGAGA 58.467 34.615 21.68 0.00 37.14 4.04
6966 8112 8.188799 TGTACTTTATGAATTTCGACTCGAGAT 58.811 33.333 21.68 2.93 37.14 2.75
6969 8115 8.407064 ACTTTATGAATTTCGACTCGAGATAGT 58.593 33.333 21.68 0.00 37.14 2.12
6970 8116 9.880064 CTTTATGAATTTCGACTCGAGATAGTA 57.120 33.333 21.68 1.43 37.14 1.82
6971 8117 9.880064 TTTATGAATTTCGACTCGAGATAGTAG 57.120 33.333 21.68 0.00 37.14 2.57
6974 8120 7.759465 TGAATTTCGACTCGAGATAGTAGTTT 58.241 34.615 21.68 2.86 37.14 2.66
6976 8122 9.157259 GAATTTCGACTCGAGATAGTAGTTTAC 57.843 37.037 21.68 0.00 37.14 2.01
6978 8124 4.742167 TCGACTCGAGATAGTAGTTTACGG 59.258 45.833 21.68 0.00 0.00 4.02
6979 8125 4.505922 CGACTCGAGATAGTAGTTTACGGT 59.494 45.833 21.68 0.00 0.00 4.83
6981 8127 4.574013 ACTCGAGATAGTAGTTTACGGTGG 59.426 45.833 21.68 0.00 0.00 4.61
6982 8128 4.517285 TCGAGATAGTAGTTTACGGTGGT 58.483 43.478 0.00 0.00 0.00 4.16
6983 8129 4.333649 TCGAGATAGTAGTTTACGGTGGTG 59.666 45.833 0.00 0.00 0.00 4.17
6985 8131 5.008415 CGAGATAGTAGTTTACGGTGGTGAT 59.992 44.000 0.00 0.00 0.00 3.06
6986 8132 6.459298 CGAGATAGTAGTTTACGGTGGTGATT 60.459 42.308 0.00 0.00 0.00 2.57
6987 8133 7.254898 CGAGATAGTAGTTTACGGTGGTGATTA 60.255 40.741 0.00 0.00 0.00 1.75
6988 8134 7.710896 AGATAGTAGTTTACGGTGGTGATTAC 58.289 38.462 0.00 0.00 0.00 1.89
6989 8135 5.726980 AGTAGTTTACGGTGGTGATTACA 57.273 39.130 0.00 0.00 0.00 2.41
6990 8136 6.100404 AGTAGTTTACGGTGGTGATTACAA 57.900 37.500 0.00 0.00 0.00 2.41
6991 8137 6.161381 AGTAGTTTACGGTGGTGATTACAAG 58.839 40.000 0.00 0.00 0.00 3.16
6992 8138 4.320870 AGTTTACGGTGGTGATTACAAGG 58.679 43.478 0.00 0.00 0.00 3.61
6993 8139 3.337694 TTACGGTGGTGATTACAAGGG 57.662 47.619 0.00 0.00 0.00 3.95
6994 8140 0.326927 ACGGTGGTGATTACAAGGGG 59.673 55.000 0.00 0.00 0.00 4.79
6995 8141 0.616371 CGGTGGTGATTACAAGGGGA 59.384 55.000 0.00 0.00 0.00 4.81
6996 8142 1.211949 CGGTGGTGATTACAAGGGGAT 59.788 52.381 0.00 0.00 0.00 3.85
6997 8143 2.356741 CGGTGGTGATTACAAGGGGATT 60.357 50.000 0.00 0.00 0.00 3.01
6998 8144 3.118186 CGGTGGTGATTACAAGGGGATTA 60.118 47.826 0.00 0.00 0.00 1.75
6999 8145 4.204799 GGTGGTGATTACAAGGGGATTAC 58.795 47.826 0.00 0.00 0.00 1.89
7000 8146 4.324719 GGTGGTGATTACAAGGGGATTACA 60.325 45.833 0.00 0.00 0.00 2.41
7001 8147 4.881850 GTGGTGATTACAAGGGGATTACAG 59.118 45.833 0.00 0.00 0.00 2.74
7002 8148 4.785914 TGGTGATTACAAGGGGATTACAGA 59.214 41.667 0.00 0.00 0.00 3.41
7003 8149 5.251932 TGGTGATTACAAGGGGATTACAGAA 59.748 40.000 0.00 0.00 0.00 3.02
7004 8150 6.069088 TGGTGATTACAAGGGGATTACAGAAT 60.069 38.462 0.00 0.00 0.00 2.40
7005 8151 6.263168 GGTGATTACAAGGGGATTACAGAATG 59.737 42.308 0.00 0.00 46.00 2.67
7006 8152 6.263168 GTGATTACAAGGGGATTACAGAATGG 59.737 42.308 0.00 0.00 43.62 3.16
7007 8153 5.789574 TTACAAGGGGATTACAGAATGGT 57.210 39.130 0.00 0.00 43.62 3.55
7008 8154 3.968265 ACAAGGGGATTACAGAATGGTG 58.032 45.455 0.00 0.00 43.62 4.17
7009 8155 3.591527 ACAAGGGGATTACAGAATGGTGA 59.408 43.478 0.00 0.00 43.62 4.02
7010 8156 4.230502 ACAAGGGGATTACAGAATGGTGAT 59.769 41.667 0.00 0.00 43.62 3.06
7046 8226 4.865365 GGAGTACATACACTCTGAACTTGC 59.135 45.833 0.00 0.00 43.73 4.01
7052 8232 3.550437 ACACTCTGAACTTGCAAGAGT 57.450 42.857 32.50 21.38 40.05 3.24
7060 8240 4.910195 TGAACTTGCAAGAGTGGTGATAT 58.090 39.130 32.50 3.08 0.00 1.63
7062 8242 5.181811 TGAACTTGCAAGAGTGGTGATATTG 59.818 40.000 32.50 2.08 0.00 1.90
7090 8270 5.951747 AGCTGGTATAGATCAATCTCTCTCC 59.048 44.000 0.00 0.00 38.32 3.71
7135 8336 6.708054 GGATTACAGAATGGATCGAAGAACAT 59.292 38.462 0.00 0.00 40.78 2.71
7171 8372 4.346709 GGGAAGGAGGAAGATAGGAGAAAG 59.653 50.000 0.00 0.00 0.00 2.62
7172 8373 5.212745 GGAAGGAGGAAGATAGGAGAAAGA 58.787 45.833 0.00 0.00 0.00 2.52
7173 8374 5.304357 GGAAGGAGGAAGATAGGAGAAAGAG 59.696 48.000 0.00 0.00 0.00 2.85
7174 8375 4.814967 AGGAGGAAGATAGGAGAAAGAGG 58.185 47.826 0.00 0.00 0.00 3.69
7175 8376 4.234223 AGGAGGAAGATAGGAGAAAGAGGT 59.766 45.833 0.00 0.00 0.00 3.85
7176 8377 5.437043 AGGAGGAAGATAGGAGAAAGAGGTA 59.563 44.000 0.00 0.00 0.00 3.08
7177 8378 5.773176 GGAGGAAGATAGGAGAAAGAGGTAG 59.227 48.000 0.00 0.00 0.00 3.18
7178 8379 6.349897 AGGAAGATAGGAGAAAGAGGTAGT 57.650 41.667 0.00 0.00 0.00 2.73
7179 8380 6.370453 AGGAAGATAGGAGAAAGAGGTAGTC 58.630 44.000 0.00 0.00 0.00 2.59
7180 8381 5.239963 GGAAGATAGGAGAAAGAGGTAGTCG 59.760 48.000 0.00 0.00 0.00 4.18
7181 8382 4.139038 AGATAGGAGAAAGAGGTAGTCGC 58.861 47.826 0.00 0.00 0.00 5.19
7182 8383 1.476477 AGGAGAAAGAGGTAGTCGCC 58.524 55.000 0.00 0.00 0.00 5.54
7183 8384 0.100861 GGAGAAAGAGGTAGTCGCCG 59.899 60.000 0.00 0.00 0.00 6.46
7184 8385 0.525882 GAGAAAGAGGTAGTCGCCGC 60.526 60.000 0.00 0.00 0.00 6.53
7185 8386 1.518792 GAAAGAGGTAGTCGCCGCC 60.519 63.158 0.00 0.00 0.00 6.13
7186 8387 2.902759 GAAAGAGGTAGTCGCCGCCC 62.903 65.000 0.00 0.00 0.00 6.13
7213 8424 2.332063 AAGCCGTAATCCACTGGATG 57.668 50.000 11.57 0.26 42.27 3.51
7249 8460 3.879892 CTGCTCCTTCATACTTTTAGGCC 59.120 47.826 0.00 0.00 0.00 5.19
7251 8462 4.018415 TGCTCCTTCATACTTTTAGGCCTT 60.018 41.667 12.58 0.00 0.00 4.35
7252 8463 4.950475 GCTCCTTCATACTTTTAGGCCTTT 59.050 41.667 12.58 0.00 0.00 3.11
7282 8493 4.344104 TGGAGGAATTTCACAGGAATTCC 58.656 43.478 17.31 17.31 39.00 3.01
7321 8532 9.965824 TCTTGTAGGAATTTTGAATTTCAAGTC 57.034 29.630 11.41 10.24 37.70 3.01
7332 8543 6.729690 TGAATTTCAAGTCCTTTGGTTCAT 57.270 33.333 0.00 0.00 37.39 2.57
7335 8546 6.840780 ATTTCAAGTCCTTTGGTTCATAGG 57.159 37.500 0.00 0.00 37.39 2.57
7338 8549 6.139679 TCAAGTCCTTTGGTTCATAGGAAT 57.860 37.500 8.31 5.37 41.71 3.01
7339 8550 7.265599 TCAAGTCCTTTGGTTCATAGGAATA 57.734 36.000 8.31 0.00 41.71 1.75
7341 8552 7.182026 TCAAGTCCTTTGGTTCATAGGAATAGA 59.818 37.037 8.31 4.95 41.71 1.98
7342 8553 7.698163 AGTCCTTTGGTTCATAGGAATAGAT 57.302 36.000 8.31 0.00 41.71 1.98
7343 8554 8.107196 AGTCCTTTGGTTCATAGGAATAGATT 57.893 34.615 8.31 0.00 41.71 2.40
7344 8555 8.214364 AGTCCTTTGGTTCATAGGAATAGATTC 58.786 37.037 8.31 0.00 41.71 2.52
7382 8593 5.893824 GGATTTGTTCCTATCCTCCACATTT 59.106 40.000 0.00 0.00 41.78 2.32
7383 8594 6.381133 GGATTTGTTCCTATCCTCCACATTTT 59.619 38.462 0.00 0.00 41.78 1.82
7385 8596 9.136323 GATTTGTTCCTATCCTCCACATTTTAT 57.864 33.333 0.00 0.00 0.00 1.40
7387 8598 9.983024 TTTGTTCCTATCCTCCACATTTTATAA 57.017 29.630 0.00 0.00 0.00 0.98
7388 8599 9.627123 TTGTTCCTATCCTCCACATTTTATAAG 57.373 33.333 0.00 0.00 0.00 1.73
7410 8621 7.631717 AAGAAAATAAACATGAGCCTAGACC 57.368 36.000 0.00 0.00 0.00 3.85
7412 8623 3.753294 ATAAACATGAGCCTAGACCCG 57.247 47.619 0.00 0.00 0.00 5.28
7416 8627 0.319728 CATGAGCCTAGACCCGATGG 59.680 60.000 0.00 0.00 37.80 3.51
7447 8659 7.558161 TCTATGATGTGAACCAAATGACATC 57.442 36.000 0.00 0.00 43.31 3.06
7448 8660 5.587388 ATGATGTGAACCAAATGACATCC 57.413 39.130 0.00 0.00 42.66 3.51
7449 8661 3.763360 TGATGTGAACCAAATGACATCCC 59.237 43.478 0.00 0.00 42.66 3.85
7457 8669 4.230455 ACCAAATGACATCCCCTTTTTCA 58.770 39.130 0.00 0.00 0.00 2.69
7464 8676 4.527816 TGACATCCCCTTTTTCAAATCCTG 59.472 41.667 0.00 0.00 0.00 3.86
7553 8765 9.578576 TTTGGAGGAATTCTATTCATAATCCTG 57.421 33.333 5.23 0.00 0.00 3.86
7554 8766 8.280258 TGGAGGAATTCTATTCATAATCCTGT 57.720 34.615 5.23 0.00 0.00 4.00
7555 8767 8.378565 TGGAGGAATTCTATTCATAATCCTGTC 58.621 37.037 5.23 0.00 0.00 3.51
7556 8768 7.826744 GGAGGAATTCTATTCATAATCCTGTCC 59.173 40.741 5.23 0.00 0.00 4.02
7557 8769 8.517323 AGGAATTCTATTCATAATCCTGTCCT 57.483 34.615 5.23 0.00 0.00 3.85
7558 8770 9.621239 AGGAATTCTATTCATAATCCTGTCCTA 57.379 33.333 5.23 0.00 0.00 2.94
7564 8776 9.607333 TCTATTCATAATCCTGTCCTATGAACT 57.393 33.333 6.02 0.97 42.07 3.01
7571 8783 7.631717 AATCCTGTCCTATGAACTAAAAAGC 57.368 36.000 0.00 0.00 0.00 3.51
7572 8784 5.497474 TCCTGTCCTATGAACTAAAAAGCC 58.503 41.667 0.00 0.00 0.00 4.35
7573 8785 5.250774 TCCTGTCCTATGAACTAAAAAGCCT 59.749 40.000 0.00 0.00 0.00 4.58
7574 8786 5.946377 CCTGTCCTATGAACTAAAAAGCCTT 59.054 40.000 0.00 0.00 0.00 4.35
7575 8787 7.037873 TCCTGTCCTATGAACTAAAAAGCCTTA 60.038 37.037 0.00 0.00 0.00 2.69
7576 8788 7.281100 CCTGTCCTATGAACTAAAAAGCCTTAG 59.719 40.741 0.00 0.00 35.40 2.18
7577 8789 6.598064 TGTCCTATGAACTAAAAAGCCTTAGC 59.402 38.462 0.00 0.00 40.32 3.09
7604 8816 4.966787 GGGTTGCGGACTGGCCAA 62.967 66.667 7.01 0.00 35.94 4.52
7605 8817 3.365265 GGTTGCGGACTGGCCAAG 61.365 66.667 7.01 3.48 35.94 3.61
7606 8818 2.594592 GTTGCGGACTGGCCAAGT 60.595 61.111 7.01 7.28 43.85 3.16
7613 8825 2.765969 ACTGGCCAAGTCCATGGG 59.234 61.111 13.02 0.00 41.01 4.00
7617 8829 2.356278 GCCAAGTCCATGGGCTGA 59.644 61.111 22.20 0.00 44.32 4.26
7618 8830 2.048603 GCCAAGTCCATGGGCTGAC 61.049 63.158 22.20 8.79 44.32 3.51
7619 8831 1.379044 CCAAGTCCATGGGCTGACC 60.379 63.158 22.20 0.00 36.79 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.827322 TCATACTTCCTCCGTCCGAAAA 59.173 45.455 0.00 0.00 0.00 2.29
1 2 2.426024 CTCATACTTCCTCCGTCCGAAA 59.574 50.000 0.00 0.00 0.00 3.46
2 3 2.022195 CTCATACTTCCTCCGTCCGAA 58.978 52.381 0.00 0.00 0.00 4.30
3 4 1.211212 TCTCATACTTCCTCCGTCCGA 59.789 52.381 0.00 0.00 0.00 4.55
4 5 1.676746 TCTCATACTTCCTCCGTCCG 58.323 55.000 0.00 0.00 0.00 4.79
5 6 3.506844 GGTATCTCATACTTCCTCCGTCC 59.493 52.174 0.00 0.00 36.04 4.79
6 7 4.142790 TGGTATCTCATACTTCCTCCGTC 58.857 47.826 0.00 0.00 36.04 4.79
7 8 4.180377 TGGTATCTCATACTTCCTCCGT 57.820 45.455 0.00 0.00 36.04 4.69
8 9 4.524714 ACATGGTATCTCATACTTCCTCCG 59.475 45.833 0.00 0.00 36.04 4.63
9 10 5.279708 CCACATGGTATCTCATACTTCCTCC 60.280 48.000 0.00 0.00 36.04 4.30
10 11 5.788450 CCACATGGTATCTCATACTTCCTC 58.212 45.833 0.00 0.00 36.04 3.71
11 12 4.040952 GCCACATGGTATCTCATACTTCCT 59.959 45.833 0.00 0.00 37.57 3.36
12 13 4.319177 GCCACATGGTATCTCATACTTCC 58.681 47.826 0.00 0.00 37.57 3.46
13 14 3.990469 CGCCACATGGTATCTCATACTTC 59.010 47.826 0.00 0.00 37.57 3.01
14 15 3.388024 ACGCCACATGGTATCTCATACTT 59.612 43.478 0.00 0.00 37.57 2.24
15 16 2.965831 ACGCCACATGGTATCTCATACT 59.034 45.455 0.00 0.00 37.57 2.12
16 17 3.386768 ACGCCACATGGTATCTCATAC 57.613 47.619 0.00 0.00 37.57 2.39
17 18 3.057806 CGTACGCCACATGGTATCTCATA 60.058 47.826 0.52 0.00 37.57 2.15
18 19 2.288213 CGTACGCCACATGGTATCTCAT 60.288 50.000 0.52 0.00 37.57 2.90
19 20 1.066454 CGTACGCCACATGGTATCTCA 59.934 52.381 0.52 0.00 37.57 3.27
20 21 1.602165 CCGTACGCCACATGGTATCTC 60.602 57.143 10.49 0.00 37.57 2.75
21 22 0.387929 CCGTACGCCACATGGTATCT 59.612 55.000 10.49 0.00 37.57 1.98
22 23 0.599204 CCCGTACGCCACATGGTATC 60.599 60.000 10.49 0.00 37.57 2.24
23 24 1.444250 CCCGTACGCCACATGGTAT 59.556 57.895 10.49 0.00 37.57 2.73
24 25 2.894158 CCCGTACGCCACATGGTA 59.106 61.111 10.49 0.00 37.57 3.25
25 26 4.770874 GCCCGTACGCCACATGGT 62.771 66.667 10.49 0.00 37.57 3.55
26 27 4.467084 AGCCCGTACGCCACATGG 62.467 66.667 10.49 5.64 38.53 3.66
27 28 3.195002 CAGCCCGTACGCCACATG 61.195 66.667 10.49 0.00 0.00 3.21
28 29 3.702048 ACAGCCCGTACGCCACAT 61.702 61.111 10.49 0.00 0.00 3.21
29 30 4.673298 CACAGCCCGTACGCCACA 62.673 66.667 10.49 0.00 0.00 4.17
46 47 3.967335 ATAGCGACTCGGCGAGGC 61.967 66.667 36.81 34.71 38.18 4.70
47 48 2.050895 CATAGCGACTCGGCGAGG 60.051 66.667 36.81 22.90 38.18 4.63
48 49 2.050895 CCATAGCGACTCGGCGAG 60.051 66.667 33.42 33.42 38.18 5.03
49 50 3.592814 CCCATAGCGACTCGGCGA 61.593 66.667 10.14 10.14 38.18 5.54
50 51 2.920645 ATCCCATAGCGACTCGGCG 61.921 63.158 0.00 0.00 38.18 6.46
51 52 1.373497 CATCCCATAGCGACTCGGC 60.373 63.158 0.00 0.00 0.00 5.54
52 53 1.373497 GCATCCCATAGCGACTCGG 60.373 63.158 0.00 0.00 0.00 4.63
53 54 0.665670 CTGCATCCCATAGCGACTCG 60.666 60.000 0.00 0.00 0.00 4.18
54 55 0.320247 CCTGCATCCCATAGCGACTC 60.320 60.000 0.00 0.00 0.00 3.36
55 56 1.050988 ACCTGCATCCCATAGCGACT 61.051 55.000 0.00 0.00 0.00 4.18
56 57 0.679505 TACCTGCATCCCATAGCGAC 59.320 55.000 0.00 0.00 0.00 5.19
57 58 0.969149 CTACCTGCATCCCATAGCGA 59.031 55.000 0.00 0.00 0.00 4.93
58 59 0.969149 TCTACCTGCATCCCATAGCG 59.031 55.000 0.00 0.00 0.00 4.26
59 60 1.337260 CGTCTACCTGCATCCCATAGC 60.337 57.143 0.00 0.00 0.00 2.97
60 61 1.273606 CCGTCTACCTGCATCCCATAG 59.726 57.143 0.00 0.00 0.00 2.23
61 62 1.338107 CCGTCTACCTGCATCCCATA 58.662 55.000 0.00 0.00 0.00 2.74
62 63 0.691078 ACCGTCTACCTGCATCCCAT 60.691 55.000 0.00 0.00 0.00 4.00
63 64 0.032912 TACCGTCTACCTGCATCCCA 60.033 55.000 0.00 0.00 0.00 4.37
64 65 0.674534 CTACCGTCTACCTGCATCCC 59.325 60.000 0.00 0.00 0.00 3.85
65 66 0.674534 CCTACCGTCTACCTGCATCC 59.325 60.000 0.00 0.00 0.00 3.51
66 67 0.032267 GCCTACCGTCTACCTGCATC 59.968 60.000 0.00 0.00 0.00 3.91
67 68 1.400530 GGCCTACCGTCTACCTGCAT 61.401 60.000 0.00 0.00 0.00 3.96
68 69 2.056223 GGCCTACCGTCTACCTGCA 61.056 63.158 0.00 0.00 0.00 4.41
69 70 2.813200 GGCCTACCGTCTACCTGC 59.187 66.667 0.00 0.00 0.00 4.85
84 85 0.179045 ATTCACTATGGCTGACCGGC 60.179 55.000 0.00 0.00 39.70 6.13
85 86 1.586422 CATTCACTATGGCTGACCGG 58.414 55.000 0.00 0.00 39.70 5.28
86 87 0.940126 GCATTCACTATGGCTGACCG 59.060 55.000 0.00 0.00 39.70 4.79
87 88 0.940126 CGCATTCACTATGGCTGACC 59.060 55.000 0.00 0.00 34.66 4.02
88 89 1.328680 CACGCATTCACTATGGCTGAC 59.671 52.381 0.00 0.00 34.66 3.51
89 90 1.655484 CACGCATTCACTATGGCTGA 58.345 50.000 0.00 0.00 34.66 4.26
90 91 0.659427 CCACGCATTCACTATGGCTG 59.341 55.000 0.00 0.00 34.66 4.85
91 92 0.541392 TCCACGCATTCACTATGGCT 59.459 50.000 0.00 0.00 34.66 4.75
92 93 0.940126 CTCCACGCATTCACTATGGC 59.060 55.000 0.00 0.00 34.66 4.40
93 94 2.477825 CTCTCCACGCATTCACTATGG 58.522 52.381 0.00 0.00 34.66 2.74
94 95 2.159043 ACCTCTCCACGCATTCACTATG 60.159 50.000 0.00 0.00 37.31 2.23
95 96 2.111384 ACCTCTCCACGCATTCACTAT 58.889 47.619 0.00 0.00 0.00 2.12
96 97 1.557099 ACCTCTCCACGCATTCACTA 58.443 50.000 0.00 0.00 0.00 2.74
97 98 0.687354 AACCTCTCCACGCATTCACT 59.313 50.000 0.00 0.00 0.00 3.41
98 99 1.523758 AAACCTCTCCACGCATTCAC 58.476 50.000 0.00 0.00 0.00 3.18
99 100 3.627395 ATAAACCTCTCCACGCATTCA 57.373 42.857 0.00 0.00 0.00 2.57
100 101 4.438744 CCAAATAAACCTCTCCACGCATTC 60.439 45.833 0.00 0.00 0.00 2.67
101 102 3.443681 CCAAATAAACCTCTCCACGCATT 59.556 43.478 0.00 0.00 0.00 3.56
102 103 3.016736 CCAAATAAACCTCTCCACGCAT 58.983 45.455 0.00 0.00 0.00 4.73
103 104 2.224670 ACCAAATAAACCTCTCCACGCA 60.225 45.455 0.00 0.00 0.00 5.24
104 105 2.161609 CACCAAATAAACCTCTCCACGC 59.838 50.000 0.00 0.00 0.00 5.34
118 119 0.476771 ACAGACCGAACCCACCAAAT 59.523 50.000 0.00 0.00 0.00 2.32
137 139 1.004560 CTGCCAAGTCGAGCTCCAA 60.005 57.895 8.47 0.00 0.00 3.53
143 145 0.803768 CGGATGTCTGCCAAGTCGAG 60.804 60.000 0.00 0.00 0.00 4.04
149 151 2.424842 AAAGCCCGGATGTCTGCCAA 62.425 55.000 0.73 0.00 0.00 4.52
164 166 5.422666 ACTAAAAATGGCTTGCAAAAAGC 57.577 34.783 0.00 0.00 45.96 3.51
168 170 8.555361 GTTTCATAACTAAAAATGGCTTGCAAA 58.445 29.630 0.00 0.00 0.00 3.68
171 173 7.650834 TGTTTCATAACTAAAAATGGCTTGC 57.349 32.000 0.00 0.00 35.24 4.01
196 198 7.441890 TTGCTTACAATCTCGTGGATTAAAA 57.558 32.000 6.19 4.23 42.20 1.52
206 212 3.103738 GCTTGCATTGCTTACAATCTCG 58.896 45.455 10.49 0.00 44.83 4.04
215 221 2.489329 ACATAACGAGCTTGCATTGCTT 59.511 40.909 14.57 3.80 41.30 3.91
227 233 4.846137 CGCAAAAAGGAAGAACATAACGAG 59.154 41.667 0.00 0.00 0.00 4.18
237 243 6.262273 ACAAACTTATCTCGCAAAAAGGAAGA 59.738 34.615 0.00 0.00 0.00 2.87
238 244 6.438763 ACAAACTTATCTCGCAAAAAGGAAG 58.561 36.000 0.00 0.00 0.00 3.46
251 257 7.571080 TTTTACGGGTGAAACAAACTTATCT 57.429 32.000 0.00 0.00 39.98 1.98
275 281 9.883142 TTGAACCAGAACAAACTTATCATTTTT 57.117 25.926 0.00 0.00 0.00 1.94
277 283 9.696917 GATTGAACCAGAACAAACTTATCATTT 57.303 29.630 0.00 0.00 0.00 2.32
278 284 8.859090 TGATTGAACCAGAACAAACTTATCATT 58.141 29.630 0.00 0.00 0.00 2.57
279 285 8.299570 GTGATTGAACCAGAACAAACTTATCAT 58.700 33.333 0.00 0.00 0.00 2.45
280 286 7.502226 AGTGATTGAACCAGAACAAACTTATCA 59.498 33.333 0.00 0.00 0.00 2.15
281 287 7.875971 AGTGATTGAACCAGAACAAACTTATC 58.124 34.615 0.00 0.00 0.00 1.75
282 288 7.823745 AGTGATTGAACCAGAACAAACTTAT 57.176 32.000 0.00 0.00 0.00 1.73
283 289 7.639113 AAGTGATTGAACCAGAACAAACTTA 57.361 32.000 0.00 0.00 30.48 2.24
284 290 6.530019 AAGTGATTGAACCAGAACAAACTT 57.470 33.333 0.00 0.00 0.00 2.66
285 291 6.332630 CAAAGTGATTGAACCAGAACAAACT 58.667 36.000 0.00 0.00 41.85 2.66
286 292 5.519927 CCAAAGTGATTGAACCAGAACAAAC 59.480 40.000 0.00 0.00 41.85 2.93
287 293 5.659463 CCAAAGTGATTGAACCAGAACAAA 58.341 37.500 0.00 0.00 41.85 2.83
288 294 4.441356 GCCAAAGTGATTGAACCAGAACAA 60.441 41.667 0.00 0.00 41.85 2.83
289 295 3.068024 GCCAAAGTGATTGAACCAGAACA 59.932 43.478 0.00 0.00 41.85 3.18
290 296 3.552890 GGCCAAAGTGATTGAACCAGAAC 60.553 47.826 0.00 0.00 41.85 3.01
291 297 2.627699 GGCCAAAGTGATTGAACCAGAA 59.372 45.455 0.00 0.00 41.85 3.02
292 298 2.238521 GGCCAAAGTGATTGAACCAGA 58.761 47.619 0.00 0.00 41.85 3.86
293 299 1.273327 GGGCCAAAGTGATTGAACCAG 59.727 52.381 4.39 0.00 41.85 4.00
294 300 1.133199 AGGGCCAAAGTGATTGAACCA 60.133 47.619 6.18 0.00 41.85 3.67
295 301 1.273327 CAGGGCCAAAGTGATTGAACC 59.727 52.381 6.18 0.00 41.85 3.62
296 302 1.963515 ACAGGGCCAAAGTGATTGAAC 59.036 47.619 6.18 0.00 41.85 3.18
297 303 2.238521 GACAGGGCCAAAGTGATTGAA 58.761 47.619 6.18 0.00 41.85 2.69
298 304 1.547675 GGACAGGGCCAAAGTGATTGA 60.548 52.381 6.18 0.00 41.85 2.57
299 305 0.890683 GGACAGGGCCAAAGTGATTG 59.109 55.000 6.18 0.00 38.84 2.67
336 342 0.951040 GTGGGTTCAGAGGTTCTGCG 60.951 60.000 1.23 0.00 43.95 5.18
340 346 3.633361 CCTGTGGGTTCAGAGGTTC 57.367 57.895 1.89 0.00 46.12 3.62
351 357 2.154462 GTCTGTGTGAATTCCTGTGGG 58.846 52.381 2.27 0.00 0.00 4.61
356 362 1.338200 GCCTCGTCTGTGTGAATTCCT 60.338 52.381 2.27 0.00 0.00 3.36
357 363 1.079503 GCCTCGTCTGTGTGAATTCC 58.920 55.000 2.27 0.00 0.00 3.01
371 377 2.125202 GAAACACCCAAACGGCCTCG 62.125 60.000 0.00 0.00 43.02 4.63
374 380 0.822121 AGAGAAACACCCAAACGGCC 60.822 55.000 0.00 0.00 33.26 6.13
375 381 1.029681 AAGAGAAACACCCAAACGGC 58.970 50.000 0.00 0.00 33.26 5.68
377 383 1.336755 CCCAAGAGAAACACCCAAACG 59.663 52.381 0.00 0.00 0.00 3.60
379 385 2.661718 GACCCAAGAGAAACACCCAAA 58.338 47.619 0.00 0.00 0.00 3.28
419 425 1.218875 TGAGTACGGCGTGCTGTTTG 61.219 55.000 34.29 0.00 36.80 2.93
424 430 1.139734 CTGATGAGTACGGCGTGCT 59.860 57.895 30.14 30.14 0.00 4.40
425 431 1.878522 CCTGATGAGTACGGCGTGC 60.879 63.158 24.86 22.68 0.00 5.34
439 445 2.563179 GCTAGGATAATCTTCCGCCTGA 59.437 50.000 0.00 0.00 40.94 3.86
440 446 2.300152 TGCTAGGATAATCTTCCGCCTG 59.700 50.000 0.00 0.00 40.94 4.85
441 447 2.300437 GTGCTAGGATAATCTTCCGCCT 59.700 50.000 0.00 0.00 40.94 5.52
442 448 2.613223 GGTGCTAGGATAATCTTCCGCC 60.613 54.545 0.00 0.00 40.94 6.13
490 496 4.100035 CCAGGATAATCTTCTTTTTGGGGC 59.900 45.833 0.00 0.00 0.00 5.80
495 501 6.256053 TCCTTGCCAGGATAATCTTCTTTTT 58.744 36.000 1.49 0.00 45.20 1.94
518 524 5.748592 ACAAAACTGAAAAGATAGCGTGTC 58.251 37.500 0.00 0.00 0.00 3.67
519 525 5.295787 TGACAAAACTGAAAAGATAGCGTGT 59.704 36.000 0.00 0.00 0.00 4.49
520 526 5.747565 TGACAAAACTGAAAAGATAGCGTG 58.252 37.500 0.00 0.00 0.00 5.34
522 528 6.373779 ACATGACAAAACTGAAAAGATAGCG 58.626 36.000 0.00 0.00 0.00 4.26
523 529 6.521133 CGACATGACAAAACTGAAAAGATAGC 59.479 38.462 0.00 0.00 0.00 2.97
524 530 7.017645 CCGACATGACAAAACTGAAAAGATAG 58.982 38.462 0.00 0.00 0.00 2.08
525 531 6.485313 ACCGACATGACAAAACTGAAAAGATA 59.515 34.615 0.00 0.00 0.00 1.98
526 532 5.299279 ACCGACATGACAAAACTGAAAAGAT 59.701 36.000 0.00 0.00 0.00 2.40
527 533 4.638421 ACCGACATGACAAAACTGAAAAGA 59.362 37.500 0.00 0.00 0.00 2.52
529 535 4.974368 ACCGACATGACAAAACTGAAAA 57.026 36.364 0.00 0.00 0.00 2.29
530 536 4.638421 AGAACCGACATGACAAAACTGAAA 59.362 37.500 0.00 0.00 0.00 2.69
531 537 4.196193 AGAACCGACATGACAAAACTGAA 58.804 39.130 0.00 0.00 0.00 3.02
532 538 3.804036 AGAACCGACATGACAAAACTGA 58.196 40.909 0.00 0.00 0.00 3.41
535 541 4.025480 ACGTAAGAACCGACATGACAAAAC 60.025 41.667 0.00 0.00 43.62 2.43
536 542 4.025563 CACGTAAGAACCGACATGACAAAA 60.026 41.667 0.00 0.00 43.62 2.44
537 543 3.491639 CACGTAAGAACCGACATGACAAA 59.508 43.478 0.00 0.00 43.62 2.83
538 544 3.054166 CACGTAAGAACCGACATGACAA 58.946 45.455 0.00 0.00 43.62 3.18
540 546 2.660236 GTCACGTAAGAACCGACATGAC 59.340 50.000 0.00 0.00 43.62 3.06
542 548 2.942710 AGTCACGTAAGAACCGACATG 58.057 47.619 0.00 0.00 43.62 3.21
543 549 3.243636 ACAAGTCACGTAAGAACCGACAT 60.244 43.478 0.00 0.00 43.62 3.06
545 551 2.735823 ACAAGTCACGTAAGAACCGAC 58.264 47.619 0.00 0.00 43.62 4.79
546 552 3.565482 AGTACAAGTCACGTAAGAACCGA 59.435 43.478 0.00 0.00 43.62 4.69
547 553 3.893720 AGTACAAGTCACGTAAGAACCG 58.106 45.455 0.00 0.00 43.62 4.44
548 554 5.521372 ACAAAGTACAAGTCACGTAAGAACC 59.479 40.000 0.00 0.00 43.62 3.62
550 556 7.037438 AGAACAAAGTACAAGTCACGTAAGAA 58.963 34.615 0.00 0.00 43.62 2.52
551 557 6.567050 AGAACAAAGTACAAGTCACGTAAGA 58.433 36.000 0.00 0.00 43.62 2.10
553 559 7.599630 AAAGAACAAAGTACAAGTCACGTAA 57.400 32.000 0.00 0.00 0.00 3.18
555 561 7.493320 TCATAAAGAACAAAGTACAAGTCACGT 59.507 33.333 0.00 0.00 0.00 4.49
556 562 7.847487 TCATAAAGAACAAAGTACAAGTCACG 58.153 34.615 0.00 0.00 0.00 4.35
582 588 9.250246 TCCATGGTAATACGTATCTCATTCATA 57.750 33.333 12.58 0.00 0.00 2.15
583 589 8.134202 TCCATGGTAATACGTATCTCATTCAT 57.866 34.615 12.58 5.05 0.00 2.57
584 590 7.533289 TCCATGGTAATACGTATCTCATTCA 57.467 36.000 12.58 2.99 0.00 2.57
611 617 1.296056 CCGACCAGCGACCGATTTTT 61.296 55.000 0.00 0.00 44.57 1.94
612 618 1.740296 CCGACCAGCGACCGATTTT 60.740 57.895 0.00 0.00 44.57 1.82
613 619 2.125673 CCGACCAGCGACCGATTT 60.126 61.111 0.00 0.00 44.57 2.17
614 620 4.814294 GCCGACCAGCGACCGATT 62.814 66.667 0.00 0.00 44.57 3.34
646 794 3.255379 GTCGAGCCCGTTGATCGC 61.255 66.667 5.13 0.00 36.43 4.58
653 801 1.218316 GGAGATTTGTCGAGCCCGT 59.782 57.895 0.00 0.00 37.05 5.28
660 808 0.818296 ACCGGAGAGGAGATTTGTCG 59.182 55.000 9.46 0.00 45.00 4.35
664 812 1.517832 CGCACCGGAGAGGAGATTT 59.482 57.895 9.46 0.00 45.00 2.17
700 848 4.760047 CACTTGGAGCGACCCGGG 62.760 72.222 22.25 22.25 38.00 5.73
701 849 4.760047 CCACTTGGAGCGACCCGG 62.760 72.222 0.00 0.00 37.39 5.73
702 850 3.691342 TCCACTTGGAGCGACCCG 61.691 66.667 0.00 0.00 39.78 5.28
728 876 3.537874 GGATGGACCCGGGACTCG 61.538 72.222 32.02 0.00 38.88 4.18
729 877 2.365105 TGGATGGACCCGGGACTC 60.365 66.667 32.02 16.07 38.00 3.36
730 878 2.365635 CTGGATGGACCCGGGACT 60.366 66.667 32.02 4.94 38.00 3.85
731 879 4.176752 GCTGGATGGACCCGGGAC 62.177 72.222 32.02 23.19 38.00 4.46
734 882 4.181010 CTGGCTGGATGGACCCGG 62.181 72.222 0.00 0.00 38.00 5.73
736 884 1.700042 CCTACTGGCTGGATGGACCC 61.700 65.000 0.00 0.00 38.00 4.46
737 885 0.691078 TCCTACTGGCTGGATGGACC 60.691 60.000 0.00 0.00 39.54 4.46
738 886 0.466124 GTCCTACTGGCTGGATGGAC 59.534 60.000 13.44 13.44 37.42 4.02
739 887 0.691078 GGTCCTACTGGCTGGATGGA 60.691 60.000 0.00 0.00 34.58 3.41
740 888 0.982852 TGGTCCTACTGGCTGGATGG 60.983 60.000 0.00 0.00 34.58 3.51
741 889 0.467384 CTGGTCCTACTGGCTGGATG 59.533 60.000 0.00 0.00 34.58 3.51
742 890 0.692419 CCTGGTCCTACTGGCTGGAT 60.692 60.000 0.00 0.00 34.58 3.41
752 909 5.072329 AGTTATACTACTACGCCTGGTCCTA 59.928 44.000 0.00 0.00 0.00 2.94
753 910 4.140536 GTTATACTACTACGCCTGGTCCT 58.859 47.826 0.00 0.00 0.00 3.85
754 911 4.140536 AGTTATACTACTACGCCTGGTCC 58.859 47.826 0.00 0.00 0.00 4.46
755 912 4.215185 GGAGTTATACTACTACGCCTGGTC 59.785 50.000 0.00 0.00 0.00 4.02
761 918 4.023365 CCCACTGGAGTTATACTACTACGC 60.023 50.000 0.00 0.00 31.19 4.42
762 919 5.128919 ACCCACTGGAGTTATACTACTACG 58.871 45.833 0.00 0.00 31.19 3.51
770 927 2.953093 TGGGACCCACTGGAGTTATA 57.047 50.000 9.95 0.00 34.81 0.98
771 928 2.127708 GATGGGACCCACTGGAGTTAT 58.872 52.381 17.78 0.00 35.80 1.89
773 930 0.475632 TGATGGGACCCACTGGAGTT 60.476 55.000 17.78 0.00 35.80 3.01
788 946 4.082523 AGCCCCCACGTCGTGATG 62.083 66.667 26.53 16.03 35.23 3.07
789 947 4.082523 CAGCCCCCACGTCGTGAT 62.083 66.667 26.53 4.26 35.23 3.06
959 1119 1.549170 CCCGGTCCTCTATTTATCCCG 59.451 57.143 0.00 0.00 0.00 5.14
1030 1199 4.530857 ATGGTACCGAGGCGCTGC 62.531 66.667 7.64 0.00 0.00 5.25
1042 1211 1.141019 GAGCAGGAACGCGATGGTA 59.859 57.895 15.93 0.00 36.85 3.25
1044 1213 2.607668 TACGAGCAGGAACGCGATGG 62.608 60.000 15.93 0.00 36.85 3.51
1047 1216 2.483745 CTACGAGCAGGAACGCGA 59.516 61.111 15.93 0.00 36.85 5.87
1053 1222 1.241990 ACACGAAGCTACGAGCAGGA 61.242 55.000 9.09 0.00 45.56 3.86
1242 1470 4.357279 AAGGCCCAGTGCTCCTGC 62.357 66.667 0.00 0.00 40.06 4.85
1356 1584 2.684104 GGAAGGGGAAGGGGAAGC 59.316 66.667 0.00 0.00 0.00 3.86
1419 1670 2.813179 GCAACATCAGCGGCCGTAG 61.813 63.158 28.70 19.56 0.00 3.51
1529 1780 6.833342 AATGAATTCAAACAAACAGAGTGC 57.167 33.333 13.09 0.00 0.00 4.40
1534 1785 5.902981 CGGCAAAATGAATTCAAACAAACAG 59.097 36.000 13.09 0.00 0.00 3.16
1550 1806 0.600557 TCCATCAAACGCGGCAAAAT 59.399 45.000 12.47 0.00 0.00 1.82
1575 1831 1.081892 CAGCGATGAACTTGACCCAG 58.918 55.000 0.00 0.00 0.00 4.45
1612 1890 2.294074 GAGCAAACAGTGGTTGGTACA 58.706 47.619 24.69 0.00 38.34 2.90
1643 1929 5.535030 TGTCGTCCTCTGCAGTTATACATAT 59.465 40.000 14.67 0.00 0.00 1.78
1644 1930 4.885325 TGTCGTCCTCTGCAGTTATACATA 59.115 41.667 14.67 0.00 0.00 2.29
1645 1931 3.699538 TGTCGTCCTCTGCAGTTATACAT 59.300 43.478 14.67 0.00 0.00 2.29
1646 1932 3.086282 TGTCGTCCTCTGCAGTTATACA 58.914 45.455 14.67 9.12 0.00 2.29
1767 2084 3.507622 CAGCTTTTTGTTAAGGAGAGGGG 59.492 47.826 0.00 0.00 0.00 4.79
1769 2086 4.216472 GGACAGCTTTTTGTTAAGGAGAGG 59.784 45.833 0.00 0.00 0.00 3.69
1775 2096 4.504097 GCACAAGGACAGCTTTTTGTTAAG 59.496 41.667 0.00 0.00 31.84 1.85
1780 2101 2.099592 TGAGCACAAGGACAGCTTTTTG 59.900 45.455 0.00 0.00 39.02 2.44
1783 2104 1.678101 GTTGAGCACAAGGACAGCTTT 59.322 47.619 0.00 0.00 39.02 3.51
1808 2129 4.996122 AGATGAACAAGAAGAAGAGCACAG 59.004 41.667 0.00 0.00 0.00 3.66
1827 2160 6.458751 GGCCAAAGTACACACATGATTAGATG 60.459 42.308 0.00 0.00 0.00 2.90
1840 2173 1.880027 CACCTGAAGGCCAAAGTACAC 59.120 52.381 5.01 0.00 39.32 2.90
1988 2387 1.843753 GACAAAACAACAACGAAGGCG 59.156 47.619 0.00 0.00 44.79 5.52
2017 2422 0.106708 AATGATCGATGTGTCCCCCG 59.893 55.000 0.54 0.00 0.00 5.73
2059 2467 6.619801 AAGAAGTCTTGCGTTTACTTTCAT 57.380 33.333 0.00 0.00 33.72 2.57
2060 2468 6.431198 AAAGAAGTCTTGCGTTTACTTTCA 57.569 33.333 0.00 0.00 36.12 2.69
2061 2469 8.831000 TTTAAAGAAGTCTTGCGTTTACTTTC 57.169 30.769 0.00 0.00 36.12 2.62
2103 2519 7.334171 TGACATGACAATTTCACTAATGATCGT 59.666 33.333 0.00 0.00 36.92 3.73
2105 2521 8.671921 ACTGACATGACAATTTCACTAATGATC 58.328 33.333 0.00 0.00 36.92 2.92
2235 2702 7.940850 TGAGAACAATAAAGAAAACCTTCAGG 58.059 34.615 0.00 0.00 42.17 3.86
2290 2757 4.551388 ACTCGACACAAAACAAGCAAAAA 58.449 34.783 0.00 0.00 0.00 1.94
2308 2775 3.611766 ACCACCTGGAAGAAATACTCG 57.388 47.619 0.00 0.00 38.94 4.18
2336 2803 6.543831 AGATAATAAAACATGAGAGGGTGTGC 59.456 38.462 0.00 0.00 0.00 4.57
2534 3001 4.695396 AGCTTCATTTGCAACATGTGAAA 58.305 34.783 0.00 0.00 0.00 2.69
3365 4111 9.846248 ATAGTTCAAGTACAGAAATTTGATTGC 57.154 29.630 0.00 0.00 30.45 3.56
3552 4299 5.293569 GGGTTGATGTACCTCAAGTTTATCG 59.706 44.000 13.13 0.00 35.88 2.92
3582 4329 9.366216 CAATATGATTCATATGCAATTCCCTTG 57.634 33.333 17.74 7.23 37.17 3.61
3686 4449 4.816385 TGAGTAGACTTTTCAGCAAAGGTG 59.184 41.667 0.00 0.00 45.70 4.00
3694 4457 8.260818 TGATAAAGGGATGAGTAGACTTTTCAG 58.739 37.037 0.00 0.00 33.79 3.02
3696 4459 8.041323 TGTGATAAAGGGATGAGTAGACTTTTC 58.959 37.037 0.00 0.00 33.79 2.29
3746 4511 5.465532 TTATTGTGGAGCAGAAAATTGCA 57.534 34.783 0.52 0.00 46.47 4.08
3778 4543 5.715439 ATCCTGATTTGTATCCCAGAACA 57.285 39.130 0.00 0.00 0.00 3.18
3914 4679 5.903764 TTGCACAAAATCGAAAATTGGAG 57.096 34.783 11.36 6.09 0.00 3.86
3952 4717 4.820173 ACTGTAACAGGAAAAACTAGCACC 59.180 41.667 0.00 0.00 35.51 5.01
3963 4728 7.925043 TTTTAACTGAACACTGTAACAGGAA 57.075 32.000 15.89 9.60 35.51 3.36
3976 4741 8.837389 ACTCTTAACAGGACATTTTAACTGAAC 58.163 33.333 0.00 0.00 35.08 3.18
4064 4829 7.555965 TGAGCTATGAGCAAGTTTCAGTTATA 58.444 34.615 0.64 0.00 45.56 0.98
4135 4900 9.316730 CAATTACATCCAGGAACCAAAATAATG 57.683 33.333 0.00 0.00 0.00 1.90
4346 5124 3.329520 TCCACTAGCAAGGGTACAAATGT 59.670 43.478 0.00 0.00 0.00 2.71
4536 5315 7.201652 GGTCTAGGAATGCTATTGAACTTTGAC 60.202 40.741 0.00 0.00 0.00 3.18
4701 5483 8.224389 TCACATTATTGTAGCAAATAGCACAT 57.776 30.769 0.00 0.00 39.06 3.21
4801 5583 6.348704 CGAACGGGTATTTTCTGGTAAATTGT 60.349 38.462 0.00 0.00 0.00 2.71
5100 5884 2.277072 CCACCCACCCACACACAA 59.723 61.111 0.00 0.00 0.00 3.33
5248 6283 2.309613 TGGCAGAAAGAGCACAACAAT 58.690 42.857 0.00 0.00 0.00 2.71
5357 6392 0.884704 GGTTGCGCTCAGGTCAGAAA 60.885 55.000 9.73 0.00 0.00 2.52
5415 6452 9.201127 TCAGATATCGATTTTGTCTCATCAATC 57.799 33.333 1.71 0.00 0.00 2.67
5439 6476 8.016301 ACTCATAGAAAGCAGAATAGACATCA 57.984 34.615 0.00 0.00 0.00 3.07
5694 6731 2.159142 CCCATCATCTTGAAGCAAAGCC 60.159 50.000 0.00 0.00 0.00 4.35
5715 6752 7.170658 CAGATATGAAGTTAAGAGCTTAGCACC 59.829 40.741 7.07 0.00 0.00 5.01
5794 6831 2.400399 GTTTTCCCTAAACTTTGCCGC 58.600 47.619 0.00 0.00 42.32 6.53
6035 7072 7.603180 TGAAGATATCAGCAGTAAGGTACAT 57.397 36.000 5.32 0.00 33.04 2.29
6065 7102 4.125703 CCCTGTAGAATCAGACAATCAGC 58.874 47.826 0.00 0.00 37.61 4.26
6077 7114 3.641906 CCAGATCGTAACCCCTGTAGAAT 59.358 47.826 0.00 0.00 0.00 2.40
6109 7146 2.774234 ACCAGCATAGGCATTCTGTACT 59.226 45.455 0.67 0.00 44.61 2.73
6159 7206 7.986085 AAATATACAACAGAGAACTTGCAGT 57.014 32.000 0.00 0.00 0.00 4.40
6181 7228 2.614983 ACGTAAAGCGGCTTGAGAAAAA 59.385 40.909 17.16 0.00 46.52 1.94
6200 7247 3.722728 TCATGATCTGAGGATGACACG 57.277 47.619 0.00 0.00 31.46 4.49
6223 7270 2.814805 ATAGCCACCAACAGAAGCAT 57.185 45.000 0.00 0.00 0.00 3.79
6231 7278 3.632145 CACCCAAGATAATAGCCACCAAC 59.368 47.826 0.00 0.00 0.00 3.77
6320 7371 1.653151 GAAACCGATCAGCCTACCAC 58.347 55.000 0.00 0.00 0.00 4.16
6326 7377 1.925185 GTTACTCGAAACCGATCAGCC 59.075 52.381 0.00 0.00 35.31 4.85
6328 7379 2.599082 GCTGTTACTCGAAACCGATCAG 59.401 50.000 0.00 0.00 35.31 2.90
6334 7387 2.155155 CGTCAAGCTGTTACTCGAAACC 59.845 50.000 0.00 0.00 0.00 3.27
6340 7393 7.061752 ACAAAATATCGTCAAGCTGTTACTC 57.938 36.000 0.00 0.00 0.00 2.59
6351 7404 7.418408 TGTTAAGCACAAACAAAATATCGTCA 58.582 30.769 0.00 0.00 34.04 4.35
6362 7415 7.144661 CCAATCAGTAATGTTAAGCACAAACA 58.855 34.615 1.70 1.70 39.50 2.83
6368 7421 6.150976 CAGTTCCCAATCAGTAATGTTAAGCA 59.849 38.462 0.00 0.00 0.00 3.91
6369 7422 6.555315 CAGTTCCCAATCAGTAATGTTAAGC 58.445 40.000 0.00 0.00 0.00 3.09
6377 7430 2.851263 ACGCAGTTCCCAATCAGTAA 57.149 45.000 0.00 0.00 37.78 2.24
6420 7473 1.211212 CCATCCATCTGCAGTCAGGAA 59.789 52.381 21.88 10.59 40.69 3.36
6493 7548 7.114388 ACGACAGAAACAAAGAACAAAAAGAAC 59.886 33.333 0.00 0.00 0.00 3.01
6644 7701 7.149080 GCAAAACGATATGCATCACATACATTC 60.149 37.037 0.19 0.00 43.99 2.67
6645 7702 6.638063 GCAAAACGATATGCATCACATACATT 59.362 34.615 0.19 0.00 43.99 2.71
6682 7739 7.026562 TGTTGGACAATTATAATCAAGTTGCG 58.973 34.615 0.00 0.00 0.00 4.85
6896 8034 8.746751 CATATCAACATCTACAACACTTACGAG 58.253 37.037 0.00 0.00 0.00 4.18
6965 8111 7.408756 TGTAATCACCACCGTAAACTACTAT 57.591 36.000 0.00 0.00 0.00 2.12
6966 8112 6.832520 TGTAATCACCACCGTAAACTACTA 57.167 37.500 0.00 0.00 0.00 1.82
6969 8115 5.481105 CCTTGTAATCACCACCGTAAACTA 58.519 41.667 0.00 0.00 0.00 2.24
6970 8116 4.320870 CCTTGTAATCACCACCGTAAACT 58.679 43.478 0.00 0.00 0.00 2.66
6971 8117 3.437741 CCCTTGTAATCACCACCGTAAAC 59.562 47.826 0.00 0.00 0.00 2.01
6974 8120 1.555992 CCCCTTGTAATCACCACCGTA 59.444 52.381 0.00 0.00 0.00 4.02
6976 8122 0.616371 TCCCCTTGTAATCACCACCG 59.384 55.000 0.00 0.00 0.00 4.94
6978 8124 4.850680 TGTAATCCCCTTGTAATCACCAC 58.149 43.478 0.00 0.00 0.00 4.16
6979 8125 4.785914 TCTGTAATCCCCTTGTAATCACCA 59.214 41.667 0.00 0.00 0.00 4.17
6981 8127 6.263168 CCATTCTGTAATCCCCTTGTAATCAC 59.737 42.308 0.00 0.00 0.00 3.06
6982 8128 6.069088 ACCATTCTGTAATCCCCTTGTAATCA 60.069 38.462 0.00 0.00 0.00 2.57
6983 8129 6.263168 CACCATTCTGTAATCCCCTTGTAATC 59.737 42.308 0.00 0.00 0.00 1.75
6985 8131 5.251932 TCACCATTCTGTAATCCCCTTGTAA 59.748 40.000 0.00 0.00 0.00 2.41
6986 8132 4.785914 TCACCATTCTGTAATCCCCTTGTA 59.214 41.667 0.00 0.00 0.00 2.41
6987 8133 3.591527 TCACCATTCTGTAATCCCCTTGT 59.408 43.478 0.00 0.00 0.00 3.16
6988 8134 4.235079 TCACCATTCTGTAATCCCCTTG 57.765 45.455 0.00 0.00 0.00 3.61
6989 8135 6.590656 TTATCACCATTCTGTAATCCCCTT 57.409 37.500 0.00 0.00 0.00 3.95
6990 8136 6.590656 TTTATCACCATTCTGTAATCCCCT 57.409 37.500 0.00 0.00 0.00 4.79
6991 8137 7.654022 TTTTTATCACCATTCTGTAATCCCC 57.346 36.000 0.00 0.00 0.00 4.81
7016 8162 3.022406 GAGTGTATGTACTCCCTCCGTT 58.978 50.000 0.00 0.00 40.92 4.44
7017 8163 2.241685 AGAGTGTATGTACTCCCTCCGT 59.758 50.000 7.36 0.00 46.48 4.69
7026 8172 5.926542 TCTTGCAAGTTCAGAGTGTATGTAC 59.073 40.000 25.19 0.00 0.00 2.90
7046 8226 3.812053 GCTAGCCAATATCACCACTCTTG 59.188 47.826 2.29 0.00 0.00 3.02
7052 8232 2.126882 ACCAGCTAGCCAATATCACCA 58.873 47.619 12.13 0.00 0.00 4.17
7060 8240 5.782331 AGATTGATCTATACCAGCTAGCCAA 59.218 40.000 12.13 4.64 34.85 4.52
7062 8242 5.656416 AGAGATTGATCTATACCAGCTAGCC 59.344 44.000 12.13 0.00 37.25 3.93
7090 8270 1.577328 CCACCGCAAACTGCTACCTG 61.577 60.000 0.00 0.00 42.25 4.00
7105 8285 3.756117 GATCCATTCTGTAATCCCCACC 58.244 50.000 0.00 0.00 0.00 4.61
7110 8290 6.049149 TGTTCTTCGATCCATTCTGTAATCC 58.951 40.000 0.00 0.00 0.00 3.01
7135 8336 0.038166 CCTTCCCCTGCTAAGTTGCA 59.962 55.000 0.00 0.00 41.05 4.08
7213 8424 0.740516 GAGCAGACAAGGAGCAGAGC 60.741 60.000 0.00 0.00 0.00 4.09
7251 8462 6.054860 TGTGAAATTCCTCCAAACCAAAAA 57.945 33.333 0.00 0.00 0.00 1.94
7252 8463 5.396213 CCTGTGAAATTCCTCCAAACCAAAA 60.396 40.000 0.00 0.00 0.00 2.44
7256 8467 3.496331 TCCTGTGAAATTCCTCCAAACC 58.504 45.455 0.00 0.00 0.00 3.27
7273 8484 7.507797 AGAATCCTATCCTATGGAATTCCTG 57.492 40.000 24.73 14.30 34.34 3.86
7316 8527 7.338710 TCTATTCCTATGAACCAAAGGACTTG 58.661 38.462 0.00 0.00 39.13 3.16
7359 8570 7.410120 AAAATGTGGAGGATAGGAACAAATC 57.590 36.000 0.00 0.00 0.00 2.17
7361 8572 9.983024 TTATAAAATGTGGAGGATAGGAACAAA 57.017 29.630 0.00 0.00 0.00 2.83
7362 8573 9.627123 CTTATAAAATGTGGAGGATAGGAACAA 57.373 33.333 0.00 0.00 0.00 2.83
7363 8574 8.998814 TCTTATAAAATGTGGAGGATAGGAACA 58.001 33.333 0.00 0.00 0.00 3.18
7364 8575 9.847224 TTCTTATAAAATGTGGAGGATAGGAAC 57.153 33.333 0.00 0.00 0.00 3.62
7385 8596 7.773690 GGGTCTAGGCTCATGTTTATTTTCTTA 59.226 37.037 0.00 0.00 0.00 2.10
7387 8598 6.122964 GGGTCTAGGCTCATGTTTATTTTCT 58.877 40.000 0.00 0.00 0.00 2.52
7388 8599 5.007724 CGGGTCTAGGCTCATGTTTATTTTC 59.992 44.000 0.00 0.00 0.00 2.29
7410 8621 7.263100 TCACATCATAGAATTTTTCCATCGG 57.737 36.000 0.00 0.00 0.00 4.18
7412 8623 8.469200 TGGTTCACATCATAGAATTTTTCCATC 58.531 33.333 0.00 0.00 0.00 3.51
7447 8659 2.899256 TGAGCAGGATTTGAAAAAGGGG 59.101 45.455 0.00 0.00 0.00 4.79
7448 8660 4.813750 ATGAGCAGGATTTGAAAAAGGG 57.186 40.909 0.00 0.00 0.00 3.95
7449 8661 6.764308 TCTATGAGCAGGATTTGAAAAAGG 57.236 37.500 0.00 0.00 0.00 3.11
7457 8669 9.282569 GTATCTCAAATTCTATGAGCAGGATTT 57.717 33.333 1.40 0.00 43.19 2.17
7464 8676 8.599055 TGACATGTATCTCAAATTCTATGAGC 57.401 34.615 0.00 0.00 43.19 4.26
7527 8739 9.578576 CAGGATTATGAATAGAATTCCTCCAAA 57.421 33.333 0.65 0.00 0.00 3.28
7528 8740 8.727149 ACAGGATTATGAATAGAATTCCTCCAA 58.273 33.333 0.65 0.00 0.00 3.53
7529 8741 8.280258 ACAGGATTATGAATAGAATTCCTCCA 57.720 34.615 0.65 0.00 0.00 3.86
7530 8742 7.826744 GGACAGGATTATGAATAGAATTCCTCC 59.173 40.741 0.65 0.00 0.00 4.30
7531 8743 8.601546 AGGACAGGATTATGAATAGAATTCCTC 58.398 37.037 0.65 0.00 0.00 3.71
7532 8744 8.517323 AGGACAGGATTATGAATAGAATTCCT 57.483 34.615 0.65 0.00 0.00 3.36
7538 8750 9.607333 AGTTCATAGGACAGGATTATGAATAGA 57.393 33.333 8.77 0.00 42.46 1.98
7545 8757 9.343539 GCTTTTTAGTTCATAGGACAGGATTAT 57.656 33.333 0.00 0.00 0.00 1.28
7546 8758 7.773690 GGCTTTTTAGTTCATAGGACAGGATTA 59.226 37.037 0.00 0.00 0.00 1.75
7547 8759 6.603599 GGCTTTTTAGTTCATAGGACAGGATT 59.396 38.462 0.00 0.00 0.00 3.01
7548 8760 6.069381 AGGCTTTTTAGTTCATAGGACAGGAT 60.069 38.462 0.00 0.00 0.00 3.24
7549 8761 5.250774 AGGCTTTTTAGTTCATAGGACAGGA 59.749 40.000 0.00 0.00 0.00 3.86
7550 8762 5.501156 AGGCTTTTTAGTTCATAGGACAGG 58.499 41.667 0.00 0.00 0.00 4.00
7551 8763 7.201652 GCTAAGGCTTTTTAGTTCATAGGACAG 60.202 40.741 4.45 0.00 33.99 3.51
7552 8764 6.598064 GCTAAGGCTTTTTAGTTCATAGGACA 59.402 38.462 4.45 0.00 33.99 4.02
7553 8765 7.017498 GCTAAGGCTTTTTAGTTCATAGGAC 57.983 40.000 4.45 0.00 33.99 3.85
7587 8799 4.966787 TTGGCCAGTCCGCAACCC 62.967 66.667 5.11 0.00 37.80 4.11
7588 8800 3.365265 CTTGGCCAGTCCGCAACC 61.365 66.667 5.11 0.00 37.80 3.77
7589 8801 2.594592 ACTTGGCCAGTCCGCAAC 60.595 61.111 5.11 0.00 37.80 4.17
7590 8802 2.281484 GACTTGGCCAGTCCGCAA 60.281 61.111 19.08 0.00 45.84 4.85
7596 8808 2.765969 CCCATGGACTTGGCCAGT 59.234 61.111 15.22 6.54 42.15 4.00
7597 8809 2.757099 GCCCATGGACTTGGCCAG 60.757 66.667 15.22 2.72 42.15 4.85
7598 8810 3.267233 AGCCCATGGACTTGGCCA 61.267 61.111 15.22 0.00 46.55 5.36
7599 8811 2.757099 CAGCCCATGGACTTGGCC 60.757 66.667 15.22 0.00 46.55 5.36
7600 8812 2.048603 GTCAGCCCATGGACTTGGC 61.049 63.158 15.22 7.67 45.70 4.52
7601 8813 1.379044 GGTCAGCCCATGGACTTGG 60.379 63.158 15.22 0.00 36.46 3.61
7602 8814 4.326255 GGTCAGCCCATGGACTTG 57.674 61.111 15.22 8.52 34.49 3.16
7612 8824 3.015145 TAGCCCTTGGGGTCAGCC 61.015 66.667 14.24 0.00 46.51 4.85
7613 8825 2.592308 CTAGCCCTTGGGGTCAGC 59.408 66.667 14.24 0.00 46.51 4.26
7614 8826 1.306997 TCCTAGCCCTTGGGGTCAG 60.307 63.158 14.24 7.16 46.51 3.51
7615 8827 1.306997 CTCCTAGCCCTTGGGGTCA 60.307 63.158 14.24 0.00 46.51 4.02
7616 8828 2.073101 CCTCCTAGCCCTTGGGGTC 61.073 68.421 14.24 0.42 46.51 4.46
7617 8829 2.042930 CCTCCTAGCCCTTGGGGT 59.957 66.667 15.19 15.19 46.51 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.