Multiple sequence alignment - TraesCS5B01G463600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G463600 chr5B 100.000 6848 0 0 1 6848 638648307 638641460 0.000000e+00 12646.0
1 TraesCS5B01G463600 chr5B 86.227 1198 111 17 1455 2637 638668178 638669336 0.000000e+00 1249.0
2 TraesCS5B01G463600 chr5B 86.230 915 89 22 4740 5624 638671177 638672084 0.000000e+00 957.0
3 TraesCS5B01G463600 chr5B 85.880 864 88 23 2810 3651 638669418 638670269 0.000000e+00 889.0
4 TraesCS5B01G463600 chr5B 91.176 510 42 3 4089 4596 638670592 638671100 0.000000e+00 689.0
5 TraesCS5B01G463600 chr5B 92.332 313 19 4 1000 1309 638667716 638668026 2.270000e-119 440.0
6 TraesCS5B01G463600 chr5B 90.116 172 17 0 3926 4097 472754846 472754675 2.490000e-54 224.0
7 TraesCS5B01G463600 chr5D 94.147 2170 88 14 2712 4869 508614850 508616992 0.000000e+00 3267.0
8 TraesCS5B01G463600 chr5D 94.902 1020 30 3 1627 2637 508613842 508614848 0.000000e+00 1576.0
9 TraesCS5B01G463600 chr5D 95.095 999 31 7 622 1617 508612823 508613806 0.000000e+00 1557.0
10 TraesCS5B01G463600 chr5D 87.273 990 109 7 1661 2637 508578805 508577820 0.000000e+00 1114.0
11 TraesCS5B01G463600 chr5D 89.029 793 73 7 4815 5597 508616993 508617781 0.000000e+00 970.0
12 TraesCS5B01G463600 chr5D 85.564 949 99 19 4672 5595 508576025 508575090 0.000000e+00 959.0
13 TraesCS5B01G463600 chr5D 85.034 882 87 28 2803 3664 508577753 508576897 0.000000e+00 856.0
14 TraesCS5B01G463600 chr5D 90.392 510 41 8 4089 4596 508576528 508576025 0.000000e+00 664.0
15 TraesCS5B01G463600 chr5D 88.462 312 32 2 1000 1307 508579500 508579189 2.330000e-99 374.0
16 TraesCS5B01G463600 chr5D 80.321 249 36 9 3689 3930 508576769 508576527 7.060000e-40 176.0
17 TraesCS5B01G463600 chr5D 100.000 37 0 0 1494 1530 508579013 508578977 1.230000e-07 69.4
18 TraesCS5B01G463600 chr3B 93.089 1447 74 10 6 1447 171166132 171167557 0.000000e+00 2095.0
19 TraesCS5B01G463600 chr3B 94.876 1093 32 10 2846 3930 171174305 171175381 0.000000e+00 1687.0
20 TraesCS5B01G463600 chr3B 93.097 1159 41 7 1621 2744 171173172 171174326 0.000000e+00 1661.0
21 TraesCS5B01G463600 chr3B 93.719 812 42 6 4727 5530 171177527 171178337 0.000000e+00 1208.0
22 TraesCS5B01G463600 chr3B 94.504 655 35 1 4089 4742 171175380 171176034 0.000000e+00 1009.0
23 TraesCS5B01G463600 chr3B 84.834 422 54 10 19 434 292025140 292024723 3.820000e-112 416.0
24 TraesCS5B01G463600 chr3B 89.552 201 6 5 1429 1625 171172896 171173085 2.470000e-59 241.0
25 TraesCS5B01G463600 chr5A 87.446 1625 161 31 4089 5688 635950520 635952126 0.000000e+00 1831.0
26 TraesCS5B01G463600 chr5A 89.590 999 62 18 1669 2637 635948363 635949349 0.000000e+00 1230.0
27 TraesCS5B01G463600 chr5A 92.875 814 39 8 3124 3930 635949720 635950521 0.000000e+00 1164.0
28 TraesCS5B01G463600 chr5A 85.307 1157 123 22 1494 2635 635938391 635937267 0.000000e+00 1151.0
29 TraesCS5B01G463600 chr5A 83.477 1047 99 34 4673 5679 635935492 635934480 0.000000e+00 907.0
30 TraesCS5B01G463600 chr5A 84.134 958 107 26 2712 3651 635937263 635936333 0.000000e+00 885.0
31 TraesCS5B01G463600 chr5A 89.881 504 48 3 4089 4590 635936001 635935499 0.000000e+00 645.0
32 TraesCS5B01G463600 chr5A 83.746 646 53 21 1 603 635944461 635945097 1.290000e-156 564.0
33 TraesCS5B01G463600 chr5A 92.500 400 13 7 603 992 635947197 635947589 2.160000e-154 556.0
34 TraesCS5B01G463600 chr5A 91.799 378 17 3 2712 3088 635949351 635949715 1.320000e-141 514.0
35 TraesCS5B01G463600 chr5A 91.877 357 20 4 949 1298 635947584 635947938 2.220000e-134 490.0
36 TraesCS5B01G463600 chr5A 86.455 347 39 6 966 1306 635938901 635938557 2.330000e-99 374.0
37 TraesCS5B01G463600 chr7A 81.944 1656 198 64 1000 2612 57211044 57212641 0.000000e+00 1308.0
38 TraesCS5B01G463600 chr7A 84.402 936 110 28 2748 3664 57212831 57213749 0.000000e+00 887.0
39 TraesCS5B01G463600 chr7A 83.403 952 106 27 4675 5593 57214626 57215558 0.000000e+00 835.0
40 TraesCS5B01G463600 chr7A 90.020 501 46 4 4089 4587 57214120 57214618 0.000000e+00 645.0
41 TraesCS5B01G463600 chr7A 81.855 248 34 7 3688 3930 57213880 57214121 1.510000e-46 198.0
42 TraesCS5B01G463600 chr7D 85.377 1101 121 20 1550 2637 53781905 53782978 0.000000e+00 1105.0
43 TraesCS5B01G463600 chr7D 84.422 995 103 28 4672 5625 53784803 53785786 0.000000e+00 931.0
44 TraesCS5B01G463600 chr7D 84.385 935 111 24 2748 3664 53783008 53783925 0.000000e+00 885.0
45 TraesCS5B01G463600 chr7D 90.020 501 46 4 4089 4587 53784296 53784794 0.000000e+00 645.0
46 TraesCS5B01G463600 chr7D 85.350 314 35 8 963 1269 53781008 53781317 1.430000e-81 315.0
47 TraesCS5B01G463600 chr7D 82.661 248 32 7 3688 3930 53784056 53784297 6.960000e-50 209.0
48 TraesCS5B01G463600 chr4A 86.829 987 105 14 1670 2637 668747751 668748731 0.000000e+00 1079.0
49 TraesCS5B01G463600 chr4A 86.332 995 113 12 1661 2637 669582106 669581117 0.000000e+00 1062.0
50 TraesCS5B01G463600 chr4A 84.004 994 108 28 4672 5624 669579293 669578310 0.000000e+00 907.0
51 TraesCS5B01G463600 chr4A 84.402 936 109 26 2748 3664 669581087 669580170 0.000000e+00 885.0
52 TraesCS5B01G463600 chr4A 85.080 878 101 20 2801 3664 668748815 668749676 0.000000e+00 869.0
53 TraesCS5B01G463600 chr4A 82.897 994 116 29 4672 5624 668750555 668751535 0.000000e+00 845.0
54 TraesCS5B01G463600 chr4A 90.020 501 46 4 4089 4587 668750048 668750546 0.000000e+00 645.0
55 TraesCS5B01G463600 chr4A 81.292 449 59 19 1000 1436 668747191 668747626 2.370000e-89 340.0
56 TraesCS5B01G463600 chr4A 91.411 163 13 1 3929 4090 97529993 97530155 8.940000e-54 222.0
57 TraesCS5B01G463600 chr4A 83.133 249 29 6 3688 3930 669580040 669579799 1.500000e-51 215.0
58 TraesCS5B01G463600 chr4A 88.750 80 6 1 2636 2712 647387643 647387564 2.030000e-15 95.3
59 TraesCS5B01G463600 chr7B 87.037 810 90 12 6044 6846 136391293 136390492 0.000000e+00 900.0
60 TraesCS5B01G463600 chr7B 80.536 560 64 19 1 517 504772307 504772864 8.330000e-104 388.0
61 TraesCS5B01G463600 chr3A 85.327 443 51 13 1 434 343228023 343228460 4.870000e-121 446.0
62 TraesCS5B01G463600 chr3A 90.000 80 8 0 2636 2715 603267354 603267275 3.380000e-18 104.0
63 TraesCS5B01G463600 chr3A 88.608 79 8 1 2634 2711 117319964 117320042 2.030000e-15 95.3
64 TraesCS5B01G463600 chr2D 84.668 437 57 9 1 433 171436166 171436596 1.770000e-115 427.0
65 TraesCS5B01G463600 chr2D 80.606 495 75 16 34 523 8298337 8298815 5.050000e-96 363.0
66 TraesCS5B01G463600 chr2D 82.045 440 64 14 1 432 470061457 470061889 1.820000e-95 361.0
67 TraesCS5B01G463600 chr2D 91.358 162 14 0 3929 4090 520539404 520539243 8.940000e-54 222.0
68 TraesCS5B01G463600 chr2D 86.861 137 18 0 392 528 27551858 27551994 3.310000e-33 154.0
69 TraesCS5B01G463600 chr2B 81.887 530 70 19 1 510 225698682 225698159 2.280000e-114 424.0
70 TraesCS5B01G463600 chr2B 79.434 530 72 24 20 517 647333119 647332595 2.370000e-89 340.0
71 TraesCS5B01G463600 chr2B 80.227 440 72 14 1 432 494739790 494739358 3.990000e-82 316.0
72 TraesCS5B01G463600 chr6A 80.364 550 80 21 5 531 522421960 522421416 6.440000e-105 392.0
73 TraesCS5B01G463600 chr6A 88.750 80 5 3 2634 2711 20492340 20492417 2.030000e-15 95.3
74 TraesCS5B01G463600 chr6B 82.838 437 63 12 1 432 185112027 185111598 1.390000e-101 381.0
75 TraesCS5B01G463600 chr6B 91.975 162 13 0 3929 4090 36133504 36133665 1.920000e-55 228.0
76 TraesCS5B01G463600 chr6B 89.873 79 6 1 2636 2712 55676064 55676142 4.370000e-17 100.0
77 TraesCS5B01G463600 chr4D 91.975 162 13 0 3929 4090 479687421 479687260 1.920000e-55 228.0
78 TraesCS5B01G463600 chr4B 91.358 162 14 0 3929 4090 606916924 606916763 8.940000e-54 222.0
79 TraesCS5B01G463600 chr1D 88.268 179 19 2 3917 4095 225704774 225704950 5.380000e-51 213.0
80 TraesCS5B01G463600 chr1B 85.859 198 23 5 3917 4111 325812535 325812730 9.000000e-49 206.0
81 TraesCS5B01G463600 chr3D 90.361 83 8 0 2629 2711 267628914 267628996 7.260000e-20 110.0
82 TraesCS5B01G463600 chr2A 88.750 80 7 2 2636 2714 603991614 603991692 5.650000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G463600 chr5B 638641460 638648307 6847 True 12646.000000 12646 100.000000 1 6848 1 chr5B.!!$R2 6847
1 TraesCS5B01G463600 chr5B 638667716 638672084 4368 False 844.800000 1249 88.369000 1000 5624 5 chr5B.!!$F1 4624
2 TraesCS5B01G463600 chr5D 508612823 508617781 4958 False 1842.500000 3267 93.293250 622 5597 4 chr5D.!!$F1 4975
3 TraesCS5B01G463600 chr5D 508575090 508579500 4410 True 601.771429 1114 88.149429 1000 5595 7 chr5D.!!$R1 4595
4 TraesCS5B01G463600 chr3B 171166132 171167557 1425 False 2095.000000 2095 93.089000 6 1447 1 chr3B.!!$F1 1441
5 TraesCS5B01G463600 chr3B 171172896 171178337 5441 False 1161.200000 1687 93.149600 1429 5530 5 chr3B.!!$F2 4101
6 TraesCS5B01G463600 chr5A 635944461 635952126 7665 False 907.000000 1831 89.976143 1 5688 7 chr5A.!!$F1 5687
7 TraesCS5B01G463600 chr5A 635934480 635938901 4421 True 792.400000 1151 85.850800 966 5679 5 chr5A.!!$R1 4713
8 TraesCS5B01G463600 chr7A 57211044 57215558 4514 False 774.600000 1308 84.324800 1000 5593 5 chr7A.!!$F1 4593
9 TraesCS5B01G463600 chr7D 53781008 53785786 4778 False 681.666667 1105 85.369167 963 5625 6 chr7D.!!$F1 4662
10 TraesCS5B01G463600 chr4A 669578310 669582106 3796 True 767.250000 1062 84.467750 1661 5624 4 chr4A.!!$R2 3963
11 TraesCS5B01G463600 chr4A 668747191 668751535 4344 False 755.600000 1079 85.223600 1000 5624 5 chr4A.!!$F2 4624
12 TraesCS5B01G463600 chr7B 136390492 136391293 801 True 900.000000 900 87.037000 6044 6846 1 chr7B.!!$R1 802
13 TraesCS5B01G463600 chr7B 504772307 504772864 557 False 388.000000 388 80.536000 1 517 1 chr7B.!!$F1 516
14 TraesCS5B01G463600 chr2B 225698159 225698682 523 True 424.000000 424 81.887000 1 510 1 chr2B.!!$R1 509
15 TraesCS5B01G463600 chr2B 647332595 647333119 524 True 340.000000 340 79.434000 20 517 1 chr2B.!!$R3 497
16 TraesCS5B01G463600 chr6A 522421416 522421960 544 True 392.000000 392 80.364000 5 531 1 chr6A.!!$R1 526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
676 2855 0.104855 GCGGTATGTCTCCATCTGCA 59.895 55.000 0.0 0.0 33.93 4.41 F
677 2856 1.270518 GCGGTATGTCTCCATCTGCAT 60.271 52.381 0.0 0.0 33.93 3.96 F
2523 5449 1.398960 GCACGTCTCACAAACATCAGC 60.399 52.381 0.0 0.0 0.00 4.26 F
4137 7392 2.232941 TCGTCGAAGGGAGCTACAATTT 59.767 45.455 0.0 0.0 0.00 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2494 5420 1.063806 GTGAGACGTGCTAGTTGCTG 58.936 55.0 0.00 0.0 43.37 4.41 R
2645 5706 7.703058 AGGTTAAGACACTTATTTTGGGATG 57.297 36.0 0.00 0.0 0.00 3.51 R
4269 7524 0.600057 GCTGCAAAAGACTCCCTTGG 59.400 55.0 0.00 0.0 34.79 3.61 R
5925 10812 0.165295 GTCGTTGCGCTAGGGTTTTC 59.835 55.0 9.73 0.0 0.00 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 33 9.515020 TTCATGATTTCAGAAAAGTTTGTGTAC 57.485 29.630 0.00 0.00 33.60 2.90
523 597 7.831691 TGATTTTTCTTCTCCCATTACAACA 57.168 32.000 0.00 0.00 0.00 3.33
676 2855 0.104855 GCGGTATGTCTCCATCTGCA 59.895 55.000 0.00 0.00 33.93 4.41
677 2856 1.270518 GCGGTATGTCTCCATCTGCAT 60.271 52.381 0.00 0.00 33.93 3.96
678 2857 2.681706 CGGTATGTCTCCATCTGCATC 58.318 52.381 0.00 0.00 32.29 3.91
679 2858 2.298446 CGGTATGTCTCCATCTGCATCT 59.702 50.000 0.00 0.00 32.29 2.90
680 2859 3.661944 GGTATGTCTCCATCTGCATCTG 58.338 50.000 0.00 0.00 32.29 2.90
681 2860 2.257691 ATGTCTCCATCTGCATCTGC 57.742 50.000 0.00 0.00 42.50 4.26
1442 4048 4.010349 ACCTGCTTGTCTAATTAAGCCAC 58.990 43.478 7.94 0.00 46.59 5.01
1486 4108 3.405831 CACCAATCAGTTCAGCTTGAGA 58.594 45.455 0.00 0.00 0.00 3.27
1487 4109 4.008330 CACCAATCAGTTCAGCTTGAGAT 58.992 43.478 0.00 0.00 0.00 2.75
1488 4110 4.458295 CACCAATCAGTTCAGCTTGAGATT 59.542 41.667 0.00 0.00 0.00 2.40
1489 4111 5.645067 CACCAATCAGTTCAGCTTGAGATTA 59.355 40.000 0.00 0.00 0.00 1.75
1490 4112 6.318144 CACCAATCAGTTCAGCTTGAGATTAT 59.682 38.462 0.00 0.00 0.00 1.28
1657 4547 8.120465 CACTTTACTTCGTGACACTTTACAAAT 58.880 33.333 3.68 0.00 33.04 2.32
2206 5127 9.640963 CTTATCAAATTATAAGAGTAGGGGTCG 57.359 37.037 2.89 0.00 40.44 4.79
2223 5148 4.082949 GGGGTCGTGAAGAAACCTTTAATG 60.083 45.833 0.00 0.00 33.42 1.90
2439 5365 2.746362 CAGTTTTGCACCTCAGGAGATC 59.254 50.000 0.00 0.00 0.00 2.75
2494 5420 2.762745 TCTTTACTCAGGTTTGACCGC 58.237 47.619 0.00 0.00 44.90 5.68
2514 5440 3.195041 GCAACTAGCACGTCTCACA 57.805 52.632 0.00 0.00 44.79 3.58
2523 5449 1.398960 GCACGTCTCACAAACATCAGC 60.399 52.381 0.00 0.00 0.00 4.26
2530 5456 5.576774 CGTCTCACAAACATCAGCACTATAA 59.423 40.000 0.00 0.00 0.00 0.98
2664 5725 5.264395 CCTCCATCCCAAAATAAGTGTCTT 58.736 41.667 0.00 0.00 0.00 3.01
2702 5785 6.171213 AGTTAAGAGAGTTATTTTGGGACGG 58.829 40.000 0.00 0.00 0.00 4.79
2876 5963 5.491982 ACTGAACTATCACAGACCAATTCC 58.508 41.667 0.00 0.00 37.54 3.01
2877 5964 4.843728 TGAACTATCACAGACCAATTCCC 58.156 43.478 0.00 0.00 0.00 3.97
2878 5965 4.288366 TGAACTATCACAGACCAATTCCCA 59.712 41.667 0.00 0.00 0.00 4.37
2879 5966 4.222124 ACTATCACAGACCAATTCCCAC 57.778 45.455 0.00 0.00 0.00 4.61
2880 5967 2.514458 ATCACAGACCAATTCCCACC 57.486 50.000 0.00 0.00 0.00 4.61
3092 6186 6.105333 ACAGAAATAGACAGCTGTGAGAATC 58.895 40.000 27.27 16.24 39.88 2.52
3220 6317 6.471233 TCCATGTACTCTCCAGTTTATCAG 57.529 41.667 0.00 0.00 33.62 2.90
3221 6318 5.053145 CCATGTACTCTCCAGTTTATCAGC 58.947 45.833 0.00 0.00 33.62 4.26
3328 6443 2.354510 CTCTGGTTTTCGCAACTTCACA 59.645 45.455 0.00 0.00 0.00 3.58
3331 6446 2.685388 TGGTTTTCGCAACTTCACATGA 59.315 40.909 0.00 0.00 0.00 3.07
3332 6447 3.317711 TGGTTTTCGCAACTTCACATGAT 59.682 39.130 0.00 0.00 0.00 2.45
3333 6448 4.202101 TGGTTTTCGCAACTTCACATGATT 60.202 37.500 0.00 0.00 0.00 2.57
3335 6450 5.332506 GGTTTTCGCAACTTCACATGATTTG 60.333 40.000 0.00 0.00 0.00 2.32
3336 6451 3.557577 TCGCAACTTCACATGATTTGG 57.442 42.857 0.00 0.00 0.00 3.28
3337 6452 3.145286 TCGCAACTTCACATGATTTGGA 58.855 40.909 0.00 0.00 0.00 3.53
3338 6453 3.758023 TCGCAACTTCACATGATTTGGAT 59.242 39.130 0.00 0.00 0.00 3.41
3339 6454 4.100529 CGCAACTTCACATGATTTGGATC 58.899 43.478 0.00 0.00 0.00 3.36
3340 6455 4.142534 CGCAACTTCACATGATTTGGATCT 60.143 41.667 0.00 0.00 33.28 2.75
3341 6456 5.100259 GCAACTTCACATGATTTGGATCTG 58.900 41.667 0.00 0.00 33.28 2.90
3345 6460 7.294017 ACTTCACATGATTTGGATCTGTTTT 57.706 32.000 0.00 0.00 33.28 2.43
3515 6630 3.880047 TGGGACCTATACAGTTGTTCG 57.120 47.619 0.00 0.00 0.00 3.95
3697 6938 6.685657 TGCAGTATCATAGTTCATAGAGCTG 58.314 40.000 0.00 0.00 0.00 4.24
3878 7126 4.078980 AGTTATGGAAGGCTGGGAATCATT 60.079 41.667 0.00 0.00 0.00 2.57
3936 7188 4.461781 TGCTACTTACACTGTTACTCCCTC 59.538 45.833 0.00 0.00 0.00 4.30
3984 7236 6.793349 ACAGAATTCACTACGGACTACATAC 58.207 40.000 8.44 0.00 0.00 2.39
3996 7248 9.317936 CTACGGACTACATACGGATGTATATAA 57.682 37.037 20.64 0.12 45.42 0.98
4137 7392 2.232941 TCGTCGAAGGGAGCTACAATTT 59.767 45.455 0.00 0.00 0.00 1.82
4269 7524 2.152830 GAGCTGGCATCCTCATTCATC 58.847 52.381 0.00 0.00 0.00 2.92
4338 7593 2.305928 TCAATGTCCACTGGGTTTGTG 58.694 47.619 0.00 0.00 34.93 3.33
4344 7599 3.904965 TGTCCACTGGGTTTGTGATACTA 59.095 43.478 0.00 0.00 37.60 1.82
4518 7775 1.502163 CCGATCGGCTTCTCAATGCC 61.502 60.000 23.37 0.00 45.25 4.40
4580 7837 1.033574 GGACGGGTATGGAGTCTCTG 58.966 60.000 0.00 0.00 35.42 3.35
4670 7927 0.733909 GTTGCTTCGCTTTGGCCATC 60.734 55.000 6.09 0.00 34.44 3.51
4686 7943 3.817647 GGCCATCTATCTAAACTGCTTGG 59.182 47.826 0.00 0.00 0.00 3.61
4700 7957 6.544038 AACTGCTTGGCAAAAATTGTTATC 57.456 33.333 0.00 0.00 38.41 1.75
4702 7959 6.232692 ACTGCTTGGCAAAAATTGTTATCAT 58.767 32.000 0.00 0.00 38.41 2.45
4720 7977 7.865385 TGTTATCATGATATTCGATGTTCACGA 59.135 33.333 16.06 0.00 37.99 4.35
4777 9558 0.035820 TCCGATTTTTCCGGTGGAGG 60.036 55.000 0.00 0.00 46.53 4.30
4783 9564 1.128809 TTTTCCGGTGGAGGCCTACA 61.129 55.000 15.85 15.85 31.21 2.74
4882 9721 3.885484 AAACAAGCAACATCTGAGTCG 57.115 42.857 0.00 0.00 0.00 4.18
4883 9722 1.800805 ACAAGCAACATCTGAGTCGG 58.199 50.000 0.00 0.00 0.00 4.79
4924 9777 8.561738 AACCAACCACATACTATTAGAAGTTG 57.438 34.615 0.00 0.00 33.58 3.16
4988 9842 1.065401 GCACTTGTGTTGCAGCAACTA 59.935 47.619 32.99 21.64 43.85 2.24
5041 9895 5.587844 CAGTAGGTGGTTACTATGTCGTACT 59.412 44.000 0.00 0.00 32.74 2.73
5097 9954 3.983044 TTAAGGTTGAAGCTCCTCCTC 57.017 47.619 0.00 0.00 33.09 3.71
5099 9957 0.118144 AGGTTGAAGCTCCTCCTCCT 59.882 55.000 0.00 0.00 0.00 3.69
5103 9961 2.030027 TGAAGCTCCTCCTCCTTTGA 57.970 50.000 0.00 0.00 0.00 2.69
5104 9962 2.338809 TGAAGCTCCTCCTCCTTTGAA 58.661 47.619 0.00 0.00 0.00 2.69
5106 9964 3.277715 GAAGCTCCTCCTCCTTTGAATG 58.722 50.000 0.00 0.00 0.00 2.67
5107 9965 2.273619 AGCTCCTCCTCCTTTGAATGT 58.726 47.619 0.00 0.00 0.00 2.71
5108 9966 2.646798 AGCTCCTCCTCCTTTGAATGTT 59.353 45.455 0.00 0.00 0.00 2.71
5109 9967 3.075134 AGCTCCTCCTCCTTTGAATGTTT 59.925 43.478 0.00 0.00 0.00 2.83
5112 9970 5.060427 TCCTCCTCCTTTGAATGTTTTCA 57.940 39.130 0.00 0.00 40.09 2.69
5193 10063 2.669924 GGAGATCGAACGGGTTTGTAAC 59.330 50.000 0.00 0.00 0.00 2.50
5355 10225 1.558756 AGAGCCATCCAGAAGAACCTG 59.441 52.381 0.00 0.00 0.00 4.00
5430 10309 3.752747 CAGATGGGCGCATGTATAATGAA 59.247 43.478 22.33 0.00 0.00 2.57
5547 10426 1.141254 CTGAGGGATCAGCTGAAGCAT 59.859 52.381 22.50 3.33 45.16 3.79
5552 10431 2.362736 GGATCAGCTGAAGCATGAACA 58.637 47.619 22.50 0.00 45.16 3.18
5581 10460 0.538287 CAGCAAGCTATAAGGGGCCC 60.538 60.000 17.12 17.12 0.00 5.80
5582 10461 0.993509 AGCAAGCTATAAGGGGCCCA 60.994 55.000 27.72 4.83 0.00 5.36
5614 10501 6.725364 TCTCTTCAATAGGAAATGGCTCTTT 58.275 36.000 0.00 0.00 34.44 2.52
5616 10503 8.328758 TCTCTTCAATAGGAAATGGCTCTTTAA 58.671 33.333 0.00 0.00 34.44 1.52
5625 10512 6.269769 AGGAAATGGCTCTTTAAAATCCAACA 59.730 34.615 6.77 0.00 0.00 3.33
5626 10513 6.934083 GGAAATGGCTCTTTAAAATCCAACAA 59.066 34.615 6.77 0.00 0.00 2.83
5628 10515 8.922931 AAATGGCTCTTTAAAATCCAACAATT 57.077 26.923 6.77 0.00 0.00 2.32
5629 10516 7.910441 ATGGCTCTTTAAAATCCAACAATTG 57.090 32.000 3.24 3.24 0.00 2.32
5642 10529 4.425520 CCAACAATTGGTTAACGTTGTGT 58.574 39.130 11.99 9.50 45.93 3.72
5643 10530 4.266502 CCAACAATTGGTTAACGTTGTGTG 59.733 41.667 11.99 16.34 45.93 3.82
5644 10531 4.705337 ACAATTGGTTAACGTTGTGTGT 57.295 36.364 11.99 2.69 33.85 3.72
5645 10532 4.416620 ACAATTGGTTAACGTTGTGTGTG 58.583 39.130 11.99 3.12 33.85 3.82
5646 10533 3.701532 ATTGGTTAACGTTGTGTGTGG 57.298 42.857 11.99 0.00 0.00 4.17
5647 10534 2.110901 TGGTTAACGTTGTGTGTGGT 57.889 45.000 11.99 0.00 0.00 4.16
5648 10535 1.738350 TGGTTAACGTTGTGTGTGGTG 59.262 47.619 11.99 0.00 0.00 4.17
5649 10536 1.532298 GGTTAACGTTGTGTGTGGTGC 60.532 52.381 11.99 0.00 0.00 5.01
5650 10537 1.130749 GTTAACGTTGTGTGTGGTGCA 59.869 47.619 11.99 0.00 0.00 4.57
5651 10538 1.669604 TAACGTTGTGTGTGGTGCAT 58.330 45.000 11.99 0.00 0.00 3.96
5652 10539 1.669604 AACGTTGTGTGTGGTGCATA 58.330 45.000 0.00 0.00 0.00 3.14
5653 10540 1.669604 ACGTTGTGTGTGGTGCATAA 58.330 45.000 0.00 0.00 0.00 1.90
5654 10541 1.601903 ACGTTGTGTGTGGTGCATAAG 59.398 47.619 0.00 0.00 0.00 1.73
5655 10542 1.662876 CGTTGTGTGTGGTGCATAAGC 60.663 52.381 0.00 0.00 42.57 3.09
5667 10554 2.715737 GCATAAGCAACGGGTTTGAA 57.284 45.000 0.00 0.00 41.58 2.69
5668 10555 3.230743 GCATAAGCAACGGGTTTGAAT 57.769 42.857 0.00 0.00 41.58 2.57
5669 10556 3.179048 GCATAAGCAACGGGTTTGAATC 58.821 45.455 0.00 0.00 41.58 2.52
5670 10557 3.769536 CATAAGCAACGGGTTTGAATCC 58.230 45.455 0.00 0.00 37.39 3.01
5671 10558 0.966179 AAGCAACGGGTTTGAATCCC 59.034 50.000 1.04 1.04 37.39 3.85
5672 10559 0.112412 AGCAACGGGTTTGAATCCCT 59.888 50.000 9.50 0.00 42.56 4.20
5673 10560 0.966179 GCAACGGGTTTGAATCCCTT 59.034 50.000 9.50 0.00 42.56 3.95
5674 10561 1.343142 GCAACGGGTTTGAATCCCTTT 59.657 47.619 9.50 3.70 42.56 3.11
5675 10562 2.609491 GCAACGGGTTTGAATCCCTTTC 60.609 50.000 9.50 0.00 42.56 2.62
5676 10563 2.890945 CAACGGGTTTGAATCCCTTTCT 59.109 45.455 9.50 0.00 42.56 2.52
5677 10564 3.238788 ACGGGTTTGAATCCCTTTCTT 57.761 42.857 9.50 0.00 42.56 2.52
5678 10565 3.572642 ACGGGTTTGAATCCCTTTCTTT 58.427 40.909 9.50 0.00 42.56 2.52
5679 10566 3.964688 ACGGGTTTGAATCCCTTTCTTTT 59.035 39.130 9.50 0.00 42.56 2.27
5680 10567 4.202212 ACGGGTTTGAATCCCTTTCTTTTG 60.202 41.667 9.50 0.00 42.56 2.44
5681 10568 4.065088 GGGTTTGAATCCCTTTCTTTTGC 58.935 43.478 4.04 0.00 41.58 3.68
5682 10569 3.740832 GGTTTGAATCCCTTTCTTTTGCG 59.259 43.478 0.00 0.00 35.23 4.85
5683 10570 4.368315 GTTTGAATCCCTTTCTTTTGCGT 58.632 39.130 0.00 0.00 35.23 5.24
5684 10571 5.508320 GGTTTGAATCCCTTTCTTTTGCGTA 60.508 40.000 0.00 0.00 35.23 4.42
5685 10572 4.759516 TGAATCCCTTTCTTTTGCGTAC 57.240 40.909 0.00 0.00 35.23 3.67
5686 10573 4.138290 TGAATCCCTTTCTTTTGCGTACA 58.862 39.130 0.00 0.00 35.23 2.90
5687 10574 4.764823 TGAATCCCTTTCTTTTGCGTACAT 59.235 37.500 0.00 0.00 35.23 2.29
5688 10575 4.701956 ATCCCTTTCTTTTGCGTACATG 57.298 40.909 0.00 0.00 0.00 3.21
5692 10579 5.049267 TCCCTTTCTTTTGCGTACATGTTAC 60.049 40.000 2.30 0.00 0.00 2.50
5707 10594 3.746045 TGTTACTGAACTCTGGGTGTC 57.254 47.619 0.00 0.00 36.45 3.67
5710 10597 2.918712 ACTGAACTCTGGGTGTCTTG 57.081 50.000 0.00 0.00 0.00 3.02
5736 10623 3.492337 AGCAACGGTTTGAATCCCTTTA 58.508 40.909 0.00 0.00 34.24 1.85
5743 10630 6.005198 ACGGTTTGAATCCCTTTATGTTGTA 58.995 36.000 0.00 0.00 0.00 2.41
5762 10649 7.835822 TGTTGTATTCATTTACTTCATTGGGG 58.164 34.615 0.00 0.00 0.00 4.96
5763 10650 7.093552 TGTTGTATTCATTTACTTCATTGGGGG 60.094 37.037 0.00 0.00 0.00 5.40
5764 10651 6.736581 TGTATTCATTTACTTCATTGGGGGA 58.263 36.000 0.00 0.00 0.00 4.81
5765 10652 7.361438 TGTATTCATTTACTTCATTGGGGGAT 58.639 34.615 0.00 0.00 0.00 3.85
5766 10653 7.843760 TGTATTCATTTACTTCATTGGGGGATT 59.156 33.333 0.00 0.00 0.00 3.01
5767 10654 6.790232 TTCATTTACTTCATTGGGGGATTC 57.210 37.500 0.00 0.00 0.00 2.52
5768 10655 4.887071 TCATTTACTTCATTGGGGGATTCG 59.113 41.667 0.00 0.00 0.00 3.34
5769 10656 3.290948 TTACTTCATTGGGGGATTCGG 57.709 47.619 0.00 0.00 0.00 4.30
5770 10657 0.258774 ACTTCATTGGGGGATTCGGG 59.741 55.000 0.00 0.00 0.00 5.14
5771 10658 0.468029 CTTCATTGGGGGATTCGGGG 60.468 60.000 0.00 0.00 0.00 5.73
5772 10659 1.943730 TTCATTGGGGGATTCGGGGG 61.944 60.000 0.00 0.00 0.00 5.40
5773 10660 2.287661 ATTGGGGGATTCGGGGGT 60.288 61.111 0.00 0.00 0.00 4.95
5774 10661 2.700185 ATTGGGGGATTCGGGGGTG 61.700 63.158 0.00 0.00 0.00 4.61
5775 10662 4.686437 TGGGGGATTCGGGGGTGT 62.686 66.667 0.00 0.00 0.00 4.16
5776 10663 4.123545 GGGGGATTCGGGGGTGTG 62.124 72.222 0.00 0.00 0.00 3.82
5777 10664 3.335729 GGGGATTCGGGGGTGTGT 61.336 66.667 0.00 0.00 0.00 3.72
5778 10665 1.996748 GGGGATTCGGGGGTGTGTA 60.997 63.158 0.00 0.00 0.00 2.90
5779 10666 1.525442 GGGATTCGGGGGTGTGTAG 59.475 63.158 0.00 0.00 0.00 2.74
5780 10667 0.979187 GGGATTCGGGGGTGTGTAGA 60.979 60.000 0.00 0.00 0.00 2.59
5781 10668 1.129058 GGATTCGGGGGTGTGTAGAT 58.871 55.000 0.00 0.00 0.00 1.98
5782 10669 1.489230 GGATTCGGGGGTGTGTAGATT 59.511 52.381 0.00 0.00 0.00 2.40
5783 10670 2.484947 GGATTCGGGGGTGTGTAGATTC 60.485 54.545 0.00 0.00 0.00 2.52
5784 10671 1.646912 TTCGGGGGTGTGTAGATTCA 58.353 50.000 0.00 0.00 0.00 2.57
5785 10672 1.874129 TCGGGGGTGTGTAGATTCAT 58.126 50.000 0.00 0.00 0.00 2.57
5786 10673 1.484653 TCGGGGGTGTGTAGATTCATG 59.515 52.381 0.00 0.00 0.00 3.07
5787 10674 1.475034 CGGGGGTGTGTAGATTCATGG 60.475 57.143 0.00 0.00 0.00 3.66
5788 10675 1.680338 GGGGTGTGTAGATTCATGGC 58.320 55.000 0.00 0.00 0.00 4.40
5789 10676 1.064758 GGGGTGTGTAGATTCATGGCA 60.065 52.381 0.00 0.00 0.00 4.92
5790 10677 2.017049 GGGTGTGTAGATTCATGGCAC 58.983 52.381 0.00 0.00 0.00 5.01
5791 10678 2.356125 GGGTGTGTAGATTCATGGCACT 60.356 50.000 0.00 0.00 0.00 4.40
5792 10679 3.347216 GGTGTGTAGATTCATGGCACTT 58.653 45.455 0.00 0.00 0.00 3.16
5793 10680 3.375299 GGTGTGTAGATTCATGGCACTTC 59.625 47.826 0.00 0.00 0.00 3.01
5794 10681 4.256920 GTGTGTAGATTCATGGCACTTCT 58.743 43.478 0.00 0.00 0.00 2.85
5795 10682 4.697352 GTGTGTAGATTCATGGCACTTCTT 59.303 41.667 0.00 0.00 0.00 2.52
5796 10683 5.874810 GTGTGTAGATTCATGGCACTTCTTA 59.125 40.000 0.00 0.00 0.00 2.10
5797 10684 6.540189 GTGTGTAGATTCATGGCACTTCTTAT 59.460 38.462 0.00 0.00 0.00 1.73
5798 10685 7.066284 GTGTGTAGATTCATGGCACTTCTTATT 59.934 37.037 0.00 0.00 0.00 1.40
5799 10686 7.066163 TGTGTAGATTCATGGCACTTCTTATTG 59.934 37.037 0.00 0.00 0.00 1.90
5800 10687 7.066284 GTGTAGATTCATGGCACTTCTTATTGT 59.934 37.037 0.00 0.00 0.00 2.71
5801 10688 8.264347 TGTAGATTCATGGCACTTCTTATTGTA 58.736 33.333 0.00 0.00 0.00 2.41
5802 10689 9.277783 GTAGATTCATGGCACTTCTTATTGTAT 57.722 33.333 0.00 0.00 0.00 2.29
5803 10690 8.757982 AGATTCATGGCACTTCTTATTGTATT 57.242 30.769 0.00 0.00 0.00 1.89
5804 10691 8.627403 AGATTCATGGCACTTCTTATTGTATTG 58.373 33.333 0.00 0.00 0.00 1.90
5805 10692 7.701539 TTCATGGCACTTCTTATTGTATTGT 57.298 32.000 0.00 0.00 0.00 2.71
5806 10693 8.800370 TTCATGGCACTTCTTATTGTATTGTA 57.200 30.769 0.00 0.00 0.00 2.41
5807 10694 8.208718 TCATGGCACTTCTTATTGTATTGTAC 57.791 34.615 0.00 0.00 0.00 2.90
5808 10695 8.046708 TCATGGCACTTCTTATTGTATTGTACT 58.953 33.333 0.00 0.00 0.00 2.73
5809 10696 8.677300 CATGGCACTTCTTATTGTATTGTACTT 58.323 33.333 0.00 0.00 0.00 2.24
5810 10697 8.039603 TGGCACTTCTTATTGTATTGTACTTG 57.960 34.615 0.00 0.00 0.00 3.16
5811 10698 7.663905 TGGCACTTCTTATTGTATTGTACTTGT 59.336 33.333 0.00 0.00 0.00 3.16
5812 10699 7.962918 GGCACTTCTTATTGTATTGTACTTGTG 59.037 37.037 0.00 0.00 0.00 3.33
5813 10700 7.481798 GCACTTCTTATTGTATTGTACTTGTGC 59.518 37.037 0.00 0.00 37.10 4.57
5814 10701 8.721478 CACTTCTTATTGTATTGTACTTGTGCT 58.279 33.333 0.00 0.00 0.00 4.40
5815 10702 8.936864 ACTTCTTATTGTATTGTACTTGTGCTC 58.063 33.333 0.00 0.00 0.00 4.26
5816 10703 8.840833 TTCTTATTGTATTGTACTTGTGCTCA 57.159 30.769 0.00 0.00 0.00 4.26
5817 10704 8.479313 TCTTATTGTATTGTACTTGTGCTCAG 57.521 34.615 0.00 0.00 0.00 3.35
5818 10705 5.551760 ATTGTATTGTACTTGTGCTCAGC 57.448 39.130 0.00 0.00 0.00 4.26
5819 10706 4.271696 TGTATTGTACTTGTGCTCAGCT 57.728 40.909 0.00 0.00 0.00 4.24
5820 10707 4.245660 TGTATTGTACTTGTGCTCAGCTC 58.754 43.478 0.00 0.00 0.00 4.09
5821 10708 2.908688 TTGTACTTGTGCTCAGCTCA 57.091 45.000 0.00 0.00 0.00 4.26
5822 10709 3.407424 TTGTACTTGTGCTCAGCTCAT 57.593 42.857 1.42 0.00 32.16 2.90
5823 10710 3.407424 TGTACTTGTGCTCAGCTCATT 57.593 42.857 1.42 0.00 32.16 2.57
5824 10711 3.069289 TGTACTTGTGCTCAGCTCATTG 58.931 45.455 1.42 1.78 32.16 2.82
5825 10712 1.531423 ACTTGTGCTCAGCTCATTGG 58.469 50.000 1.42 0.00 32.16 3.16
5826 10713 1.072806 ACTTGTGCTCAGCTCATTGGA 59.927 47.619 1.42 0.00 32.16 3.53
5827 10714 2.156917 CTTGTGCTCAGCTCATTGGAA 58.843 47.619 1.42 0.00 32.16 3.53
5828 10715 1.817357 TGTGCTCAGCTCATTGGAAG 58.183 50.000 0.00 0.00 0.00 3.46
5829 10716 1.072806 TGTGCTCAGCTCATTGGAAGT 59.927 47.619 0.00 0.00 0.00 3.01
5830 10717 2.302733 TGTGCTCAGCTCATTGGAAGTA 59.697 45.455 0.00 0.00 0.00 2.24
5831 10718 3.244526 TGTGCTCAGCTCATTGGAAGTAA 60.245 43.478 0.00 0.00 0.00 2.24
5832 10719 3.944015 GTGCTCAGCTCATTGGAAGTAAT 59.056 43.478 0.00 0.00 0.00 1.89
5833 10720 5.118990 GTGCTCAGCTCATTGGAAGTAATA 58.881 41.667 0.00 0.00 0.00 0.98
5834 10721 5.586243 GTGCTCAGCTCATTGGAAGTAATAA 59.414 40.000 0.00 0.00 0.00 1.40
5835 10722 5.819379 TGCTCAGCTCATTGGAAGTAATAAG 59.181 40.000 0.00 0.00 0.00 1.73
5836 10723 5.238214 GCTCAGCTCATTGGAAGTAATAAGG 59.762 44.000 0.00 0.00 0.00 2.69
5837 10724 6.313519 TCAGCTCATTGGAAGTAATAAGGT 57.686 37.500 0.00 0.00 0.00 3.50
5838 10725 6.115446 TCAGCTCATTGGAAGTAATAAGGTG 58.885 40.000 0.00 0.00 35.89 4.00
5839 10726 5.297776 CAGCTCATTGGAAGTAATAAGGTGG 59.702 44.000 0.00 0.00 32.63 4.61
5840 10727 5.191722 AGCTCATTGGAAGTAATAAGGTGGA 59.808 40.000 0.00 0.00 0.00 4.02
5841 10728 6.064717 GCTCATTGGAAGTAATAAGGTGGAT 58.935 40.000 0.00 0.00 0.00 3.41
5842 10729 6.016777 GCTCATTGGAAGTAATAAGGTGGATG 60.017 42.308 0.00 0.00 0.00 3.51
5843 10730 7.206789 TCATTGGAAGTAATAAGGTGGATGA 57.793 36.000 0.00 0.00 0.00 2.92
5844 10731 7.282585 TCATTGGAAGTAATAAGGTGGATGAG 58.717 38.462 0.00 0.00 0.00 2.90
5845 10732 6.884472 TTGGAAGTAATAAGGTGGATGAGA 57.116 37.500 0.00 0.00 0.00 3.27
5846 10733 6.485830 TGGAAGTAATAAGGTGGATGAGAG 57.514 41.667 0.00 0.00 0.00 3.20
5847 10734 6.202331 TGGAAGTAATAAGGTGGATGAGAGA 58.798 40.000 0.00 0.00 0.00 3.10
5848 10735 6.672218 TGGAAGTAATAAGGTGGATGAGAGAA 59.328 38.462 0.00 0.00 0.00 2.87
5849 10736 7.182026 TGGAAGTAATAAGGTGGATGAGAGAAA 59.818 37.037 0.00 0.00 0.00 2.52
5850 10737 8.214364 GGAAGTAATAAGGTGGATGAGAGAAAT 58.786 37.037 0.00 0.00 0.00 2.17
5857 10744 7.443302 AAGGTGGATGAGAGAAATAAGATCA 57.557 36.000 0.00 0.00 0.00 2.92
5858 10745 7.443302 AGGTGGATGAGAGAAATAAGATCAA 57.557 36.000 0.00 0.00 0.00 2.57
5859 10746 7.865820 AGGTGGATGAGAGAAATAAGATCAAA 58.134 34.615 0.00 0.00 0.00 2.69
5860 10747 7.772757 AGGTGGATGAGAGAAATAAGATCAAAC 59.227 37.037 0.00 0.00 0.00 2.93
5861 10748 7.012799 GGTGGATGAGAGAAATAAGATCAAACC 59.987 40.741 0.00 0.00 0.00 3.27
5862 10749 7.554118 GTGGATGAGAGAAATAAGATCAAACCA 59.446 37.037 0.00 0.00 32.27 3.67
5863 10750 7.772292 TGGATGAGAGAAATAAGATCAAACCAG 59.228 37.037 0.00 0.00 31.61 4.00
5864 10751 6.992063 TGAGAGAAATAAGATCAAACCAGC 57.008 37.500 0.00 0.00 0.00 4.85
5865 10752 5.882557 TGAGAGAAATAAGATCAAACCAGCC 59.117 40.000 0.00 0.00 0.00 4.85
5866 10753 5.819991 AGAGAAATAAGATCAAACCAGCCA 58.180 37.500 0.00 0.00 0.00 4.75
5867 10754 6.248433 AGAGAAATAAGATCAAACCAGCCAA 58.752 36.000 0.00 0.00 0.00 4.52
5868 10755 6.721208 AGAGAAATAAGATCAAACCAGCCAAA 59.279 34.615 0.00 0.00 0.00 3.28
5869 10756 7.233348 AGAGAAATAAGATCAAACCAGCCAAAA 59.767 33.333 0.00 0.00 0.00 2.44
5870 10757 7.381323 AGAAATAAGATCAAACCAGCCAAAAG 58.619 34.615 0.00 0.00 0.00 2.27
5871 10758 6.916360 AATAAGATCAAACCAGCCAAAAGA 57.084 33.333 0.00 0.00 0.00 2.52
5872 10759 7.486407 AATAAGATCAAACCAGCCAAAAGAT 57.514 32.000 0.00 0.00 0.00 2.40
5873 10760 5.397142 AAGATCAAACCAGCCAAAAGATC 57.603 39.130 0.00 0.00 0.00 2.75
5874 10761 4.670765 AGATCAAACCAGCCAAAAGATCT 58.329 39.130 0.00 0.00 36.76 2.75
5875 10762 4.461781 AGATCAAACCAGCCAAAAGATCTG 59.538 41.667 0.00 0.00 39.23 2.90
5879 10766 1.467920 CCAGCCAAAAGATCTGGTCC 58.532 55.000 0.00 0.00 41.76 4.46
5880 10767 1.467920 CAGCCAAAAGATCTGGTCCC 58.532 55.000 0.00 0.00 36.24 4.46
5881 10768 0.332972 AGCCAAAAGATCTGGTCCCC 59.667 55.000 0.00 0.00 36.24 4.81
5882 10769 0.332972 GCCAAAAGATCTGGTCCCCT 59.667 55.000 0.00 0.00 36.24 4.79
5883 10770 1.683319 GCCAAAAGATCTGGTCCCCTC 60.683 57.143 0.00 0.00 36.24 4.30
5884 10771 1.064389 CCAAAAGATCTGGTCCCCTCC 60.064 57.143 0.00 0.00 0.00 4.30
5885 10772 1.064389 CAAAAGATCTGGTCCCCTCCC 60.064 57.143 0.00 0.00 0.00 4.30
5886 10773 0.423544 AAAGATCTGGTCCCCTCCCT 59.576 55.000 0.00 0.00 0.00 4.20
5887 10774 0.030603 AAGATCTGGTCCCCTCCCTC 60.031 60.000 0.00 0.00 0.00 4.30
5888 10775 0.933791 AGATCTGGTCCCCTCCCTCT 60.934 60.000 0.00 0.00 0.00 3.69
5889 10776 0.471022 GATCTGGTCCCCTCCCTCTC 60.471 65.000 0.00 0.00 0.00 3.20
5890 10777 1.967343 ATCTGGTCCCCTCCCTCTCC 61.967 65.000 0.00 0.00 0.00 3.71
5891 10778 3.695825 TGGTCCCCTCCCTCTCCC 61.696 72.222 0.00 0.00 0.00 4.30
5892 10779 3.695825 GGTCCCCTCCCTCTCCCA 61.696 72.222 0.00 0.00 0.00 4.37
5893 10780 2.041405 GTCCCCTCCCTCTCCCAG 60.041 72.222 0.00 0.00 0.00 4.45
5894 10781 2.540910 TCCCCTCCCTCTCCCAGT 60.541 66.667 0.00 0.00 0.00 4.00
5895 10782 2.041405 CCCCTCCCTCTCCCAGTC 60.041 72.222 0.00 0.00 0.00 3.51
5896 10783 2.443016 CCCTCCCTCTCCCAGTCG 60.443 72.222 0.00 0.00 0.00 4.18
5897 10784 2.684104 CCTCCCTCTCCCAGTCGA 59.316 66.667 0.00 0.00 0.00 4.20
5898 10785 1.755008 CCTCCCTCTCCCAGTCGAC 60.755 68.421 7.70 7.70 0.00 4.20
5899 10786 2.045242 TCCCTCTCCCAGTCGACG 60.045 66.667 10.46 5.16 0.00 5.12
5900 10787 3.141488 CCCTCTCCCAGTCGACGG 61.141 72.222 10.46 14.06 0.00 4.79
5901 10788 2.361357 CCTCTCCCAGTCGACGGT 60.361 66.667 20.03 0.00 0.00 4.83
5902 10789 2.408241 CCTCTCCCAGTCGACGGTC 61.408 68.421 20.03 0.00 0.00 4.79
5903 10790 2.745100 TCTCCCAGTCGACGGTCG 60.745 66.667 23.73 23.73 42.10 4.79
5904 10791 3.054503 CTCCCAGTCGACGGTCGT 61.055 66.667 27.53 9.08 41.35 4.34
5905 10792 2.595463 TCCCAGTCGACGGTCGTT 60.595 61.111 27.53 15.77 41.35 3.85
5906 10793 2.126580 CCCAGTCGACGGTCGTTC 60.127 66.667 27.53 20.96 41.35 3.95
5907 10794 2.126580 CCAGTCGACGGTCGTTCC 60.127 66.667 27.53 17.19 41.35 3.62
5908 10795 2.126580 CAGTCGACGGTCGTTCCC 60.127 66.667 27.53 15.01 41.35 3.97
5909 10796 2.595463 AGTCGACGGTCGTTCCCA 60.595 61.111 27.53 7.58 41.35 4.37
5910 10797 2.429739 GTCGACGGTCGTTCCCAC 60.430 66.667 27.53 15.62 41.35 4.61
5936 10823 4.957164 CGGAGGGAAAACCCTAGC 57.043 61.111 7.86 0.00 40.79 3.42
5937 10824 1.153429 CGGAGGGAAAACCCTAGCG 60.153 63.158 7.86 0.00 40.79 4.26
5938 10825 1.451567 GGAGGGAAAACCCTAGCGC 60.452 63.158 7.86 0.00 40.79 5.92
5939 10826 1.298667 GAGGGAAAACCCTAGCGCA 59.701 57.895 11.47 0.00 40.79 6.09
5940 10827 0.322187 GAGGGAAAACCCTAGCGCAA 60.322 55.000 11.47 0.00 40.79 4.85
5941 10828 0.608308 AGGGAAAACCCTAGCGCAAC 60.608 55.000 11.47 0.00 41.63 4.17
5942 10829 1.500396 GGAAAACCCTAGCGCAACG 59.500 57.895 11.47 0.00 0.00 4.10
5943 10830 0.952010 GGAAAACCCTAGCGCAACGA 60.952 55.000 11.47 0.00 0.00 3.85
5944 10831 0.165295 GAAAACCCTAGCGCAACGAC 59.835 55.000 11.47 0.00 0.00 4.34
5945 10832 1.562575 AAAACCCTAGCGCAACGACG 61.563 55.000 11.47 0.00 0.00 5.12
5955 10842 4.986587 CAACGACGCGACGGTGGA 62.987 66.667 34.93 0.00 45.54 4.02
5956 10843 4.695231 AACGACGCGACGGTGGAG 62.695 66.667 31.73 6.64 37.61 3.86
5964 10851 3.391382 GACGGTGGAGGGGGTCAG 61.391 72.222 0.00 0.00 0.00 3.51
5989 10876 4.850193 CCTGATGGGCTTTGTGGT 57.150 55.556 0.00 0.00 0.00 4.16
5990 10877 2.269978 CCTGATGGGCTTTGTGGTG 58.730 57.895 0.00 0.00 0.00 4.17
5991 10878 0.540365 CCTGATGGGCTTTGTGGTGT 60.540 55.000 0.00 0.00 0.00 4.16
5992 10879 0.883833 CTGATGGGCTTTGTGGTGTC 59.116 55.000 0.00 0.00 0.00 3.67
5993 10880 0.184692 TGATGGGCTTTGTGGTGTCA 59.815 50.000 0.00 0.00 0.00 3.58
5994 10881 1.203038 TGATGGGCTTTGTGGTGTCAT 60.203 47.619 0.00 0.00 0.00 3.06
5995 10882 1.203052 GATGGGCTTTGTGGTGTCATG 59.797 52.381 0.00 0.00 0.00 3.07
5996 10883 1.290009 GGGCTTTGTGGTGTCATGC 59.710 57.895 0.00 0.00 0.00 4.06
5997 10884 1.462731 GGGCTTTGTGGTGTCATGCA 61.463 55.000 0.00 0.00 0.00 3.96
5998 10885 0.604578 GGCTTTGTGGTGTCATGCAT 59.395 50.000 0.00 0.00 0.00 3.96
5999 10886 1.670674 GGCTTTGTGGTGTCATGCATG 60.671 52.381 21.07 21.07 0.00 4.06
6000 10887 1.000060 GCTTTGTGGTGTCATGCATGT 60.000 47.619 25.43 0.00 0.00 3.21
6001 10888 2.923605 GCTTTGTGGTGTCATGCATGTC 60.924 50.000 25.43 20.50 0.00 3.06
6002 10889 2.275134 TTGTGGTGTCATGCATGTCT 57.725 45.000 25.43 0.00 0.00 3.41
6003 10890 2.275134 TGTGGTGTCATGCATGTCTT 57.725 45.000 25.43 0.00 0.00 3.01
6004 10891 1.881324 TGTGGTGTCATGCATGTCTTG 59.119 47.619 25.43 1.79 0.00 3.02
6005 10892 1.881973 GTGGTGTCATGCATGTCTTGT 59.118 47.619 25.43 0.00 0.00 3.16
6006 10893 1.881324 TGGTGTCATGCATGTCTTGTG 59.119 47.619 25.43 0.16 0.00 3.33
6007 10894 1.401931 GGTGTCATGCATGTCTTGTGC 60.402 52.381 25.43 10.20 42.81 4.57
6012 10899 3.342982 TGCATGTCTTGTGCATGGA 57.657 47.368 7.29 1.86 46.76 3.41
6013 10900 1.170442 TGCATGTCTTGTGCATGGAG 58.830 50.000 7.29 0.00 46.76 3.86
6014 10901 1.171308 GCATGTCTTGTGCATGGAGT 58.829 50.000 7.29 0.00 42.72 3.85
6015 10902 1.135489 GCATGTCTTGTGCATGGAGTG 60.135 52.381 7.29 0.00 42.72 3.51
6016 10903 1.471287 CATGTCTTGTGCATGGAGTGG 59.529 52.381 0.00 0.00 39.82 4.00
6017 10904 0.890542 TGTCTTGTGCATGGAGTGGC 60.891 55.000 0.00 0.00 0.00 5.01
6018 10905 1.672030 TCTTGTGCATGGAGTGGCG 60.672 57.895 0.00 0.00 0.00 5.69
6019 10906 2.672651 TTGTGCATGGAGTGGCGG 60.673 61.111 0.00 0.00 0.00 6.13
6037 10924 4.201679 CGGCGGCCACTATCGTGA 62.202 66.667 20.71 0.00 43.97 4.35
6038 10925 2.185867 GGCGGCCACTATCGTGAA 59.814 61.111 15.62 0.00 43.97 3.18
6039 10926 1.883084 GGCGGCCACTATCGTGAAG 60.883 63.158 15.62 0.00 43.97 3.02
6040 10927 2.526120 GCGGCCACTATCGTGAAGC 61.526 63.158 2.24 0.00 43.97 3.86
6041 10928 2.230940 CGGCCACTATCGTGAAGCG 61.231 63.158 2.24 0.00 43.97 4.68
6042 10929 1.153628 GGCCACTATCGTGAAGCGT 60.154 57.895 0.00 0.00 43.97 5.07
6109 10996 2.668550 GTGTGTCGAACTGGGCCC 60.669 66.667 17.59 17.59 0.00 5.80
6124 11011 0.328258 GGCCCGCCCATGAATATAGT 59.672 55.000 0.00 0.00 0.00 2.12
6155 11042 3.824414 AAGCGCGTTGTAGCTAAAAAT 57.176 38.095 8.43 0.00 43.78 1.82
6160 11048 4.371948 GCGCGTTGTAGCTAAAAATATTCG 59.628 41.667 8.43 0.00 34.40 3.34
6162 11050 4.669283 GCGTTGTAGCTAAAAATATTCGCC 59.331 41.667 14.50 1.68 34.20 5.54
6163 11051 5.728344 GCGTTGTAGCTAAAAATATTCGCCA 60.728 40.000 14.50 0.00 34.20 5.69
6168 11056 3.815401 AGCTAAAAATATTCGCCATCGCT 59.185 39.130 0.00 0.00 35.26 4.93
6191 11079 4.010349 GGAATTCGAAACCAGAACCTCAT 58.990 43.478 16.40 0.00 0.00 2.90
6195 11083 2.154462 CGAAACCAGAACCTCATGCTT 58.846 47.619 0.00 0.00 0.00 3.91
6197 11085 3.610114 CGAAACCAGAACCTCATGCTTTG 60.610 47.826 0.00 0.00 0.00 2.77
6218 11106 0.603707 CTGACGTGGCACCATCAGTT 60.604 55.000 26.85 1.60 35.00 3.16
6251 11139 4.444720 GTCGTTACTGATTATAGTGCAGCC 59.555 45.833 0.00 0.00 33.03 4.85
6259 11147 0.623324 TATAGTGCAGCCCCACCCTT 60.623 55.000 0.00 0.00 36.38 3.95
6276 11164 2.962421 CCCTTAAAGAACCAACAGGCAA 59.038 45.455 0.00 0.00 0.00 4.52
6278 11166 3.383185 CCTTAAAGAACCAACAGGCAACA 59.617 43.478 0.00 0.00 41.41 3.33
6280 11168 0.738389 AAGAACCAACAGGCAACACG 59.262 50.000 0.00 0.00 41.41 4.49
6285 11173 0.802494 CCAACAGGCAACACGTATCC 59.198 55.000 0.00 0.00 41.41 2.59
6299 11187 7.323656 GCAACACGTATCCAAAATATATCTTGC 59.676 37.037 0.00 0.00 0.00 4.01
6300 11188 8.559536 CAACACGTATCCAAAATATATCTTGCT 58.440 33.333 0.00 0.00 0.00 3.91
6364 11253 8.725148 TGTGAAACACAAACAAATTGCTAATTT 58.275 25.926 1.99 0.00 45.67 1.82
6446 11335 6.870439 GGGAACATCTTTTGAAATTCCAAGAG 59.130 38.462 8.87 0.00 43.15 2.85
6447 11336 7.255942 GGGAACATCTTTTGAAATTCCAAGAGA 60.256 37.037 0.07 0.07 43.15 3.10
6460 11349 8.579682 AAATTCCAAGAGAGAATTTGAAAACG 57.420 30.769 9.91 0.00 46.80 3.60
6461 11350 6.693315 TTCCAAGAGAGAATTTGAAAACGT 57.307 33.333 0.00 0.00 0.00 3.99
6464 11353 6.486657 TCCAAGAGAGAATTTGAAAACGTGAT 59.513 34.615 0.00 0.00 0.00 3.06
6465 11354 7.013274 TCCAAGAGAGAATTTGAAAACGTGATT 59.987 33.333 0.00 0.00 0.00 2.57
6515 11407 7.495279 TGAAACCAAACAATTTTGAATCTCCTG 59.505 33.333 0.00 0.00 44.38 3.86
6589 11481 2.102252 GGAACATGTTTTGAACAGCCCA 59.898 45.455 13.36 0.00 45.95 5.36
6593 11485 2.285827 TGTTTTGAACAGCCCAAACG 57.714 45.000 0.00 0.00 36.25 3.60
6629 11521 4.222114 GAGACAGTTCTTCAAATTTGCGG 58.778 43.478 13.54 8.34 29.47 5.69
6633 11525 4.037923 ACAGTTCTTCAAATTTGCGGACAT 59.962 37.500 13.54 2.44 0.00 3.06
6749 11643 6.988329 ACTACAAACAAAATTCAAAAGCACG 58.012 32.000 0.00 0.00 0.00 5.34
6752 11646 6.303370 ACAAACAAAATTCAAAAGCACGAAC 58.697 32.000 0.00 0.00 0.00 3.95
6755 11649 7.763172 AACAAAATTCAAAAGCACGAACATA 57.237 28.000 0.00 0.00 0.00 2.29
6761 11655 7.945033 ATTCAAAAGCACGAACATATTTTGT 57.055 28.000 8.14 0.00 40.20 2.83
6828 11722 6.151004 TCCGAATAAAATTTGAAAACCCGAC 58.849 36.000 0.00 0.00 0.00 4.79
6830 11724 5.921408 CGAATAAAATTTGAAAACCCGACCA 59.079 36.000 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
252 262 6.128661 CGAACATTTCTAGAATGGACGAACAA 60.129 38.462 5.89 0.00 34.74 2.83
443 517 5.594725 ACATCACCGAGATACACTATCACTT 59.405 40.000 0.00 0.00 37.65 3.16
523 597 2.683968 TGCTTTTTAGATCGCTCGTGT 58.316 42.857 0.00 0.00 0.00 4.49
555 629 4.682778 TCCATTTTAGATAGGACCCACG 57.317 45.455 0.00 0.00 0.00 4.94
1442 4048 7.241376 GTGGAATTAGATGGTTGAAGTTTACG 58.759 38.462 0.00 0.00 0.00 3.18
1563 4306 5.711506 TGTCAAATGATGTAAATCCACAGCT 59.288 36.000 0.00 0.00 35.84 4.24
1657 4547 3.303066 GCTGCAACAATCGCGATAACATA 60.303 43.478 24.00 6.85 0.00 2.29
2223 5148 7.997107 AACCCTCGAATAAAACAAAAGAAAC 57.003 32.000 0.00 0.00 0.00 2.78
2439 5365 3.958147 AACCCTCATGCGAGTGCCG 62.958 63.158 0.00 0.00 41.78 5.69
2494 5420 1.063806 GTGAGACGTGCTAGTTGCTG 58.936 55.000 0.00 0.00 43.37 4.41
2645 5706 7.703058 AGGTTAAGACACTTATTTTGGGATG 57.297 36.000 0.00 0.00 0.00 3.51
2646 5707 9.462606 CTAAGGTTAAGACACTTATTTTGGGAT 57.537 33.333 0.00 0.00 0.00 3.85
2756 5839 8.709646 GCGATCCTATCAAAATTAACTAATCGT 58.290 33.333 0.00 0.00 35.02 3.73
2757 5840 8.708742 TGCGATCCTATCAAAATTAACTAATCG 58.291 33.333 0.00 0.00 35.49 3.34
2876 5963 5.703592 TGTATTTAAGTAAGTGCTGTGGTGG 59.296 40.000 0.00 0.00 0.00 4.61
2877 5964 6.795098 TGTATTTAAGTAAGTGCTGTGGTG 57.205 37.500 0.00 0.00 0.00 4.17
2878 5965 7.165485 TGATGTATTTAAGTAAGTGCTGTGGT 58.835 34.615 0.00 0.00 0.00 4.16
2879 5966 7.609760 TGATGTATTTAAGTAAGTGCTGTGG 57.390 36.000 0.00 0.00 0.00 4.17
3092 6186 7.718272 TTTTTCATGAAAAGAAAGCATCTGG 57.282 32.000 27.52 0.00 40.83 3.86
3120 6214 2.622942 TCTGTTTTGCAATCTGGGTGTC 59.377 45.455 0.00 0.00 0.00 3.67
3220 6317 0.179056 TAATTAGGGCGTCTGCAGGC 60.179 55.000 15.13 12.04 45.35 4.85
3221 6318 2.325583 TTAATTAGGGCGTCTGCAGG 57.674 50.000 15.13 0.00 45.35 4.85
3348 6463 7.725251 TCCTGCACAAGAATCAAATAAAAAGT 58.275 30.769 0.00 0.00 0.00 2.66
3349 6464 8.084073 TCTCCTGCACAAGAATCAAATAAAAAG 58.916 33.333 0.00 0.00 0.00 2.27
3515 6630 2.159393 TCGCACCATTTAGAAAGCATGC 60.159 45.455 10.51 10.51 0.00 4.06
3714 6955 2.433436 GTACTTTTTGATCCTGCCCGT 58.567 47.619 0.00 0.00 0.00 5.28
3792 7040 4.389890 TCCTGCAATTTATTGTGATGGC 57.610 40.909 4.54 0.00 39.88 4.40
3878 7126 2.043939 TGGTCCAGTCTAGCCCTTTAGA 59.956 50.000 0.00 0.00 0.00 2.10
3963 7215 5.008019 TCCGTATGTAGTCCGTAGTGAATTC 59.992 44.000 0.00 0.00 0.00 2.17
4011 7263 5.699839 ACGGAGCAAAATGAGTGAATTTAC 58.300 37.500 0.00 0.00 0.00 2.01
4056 7308 9.822185 TCCGTTCCTAAATATAAGTCCTTTTAC 57.178 33.333 0.00 0.00 0.00 2.01
4060 7312 6.042897 CCCTCCGTTCCTAAATATAAGTCCTT 59.957 42.308 0.00 0.00 0.00 3.36
4102 7357 1.542472 TCGACGAGCTTGTAATGGACA 59.458 47.619 6.58 0.00 35.78 4.02
4137 7392 6.654959 TGTAGCAAGTACCCTGCAATTATAA 58.345 36.000 17.26 0.00 0.00 0.98
4269 7524 0.600057 GCTGCAAAAGACTCCCTTGG 59.400 55.000 0.00 0.00 34.79 3.61
4338 7593 7.067496 TGGATTTCCCTGTTCATCTAGTATC 57.933 40.000 0.00 0.00 35.38 2.24
4344 7599 6.066690 CACATATGGATTTCCCTGTTCATCT 58.933 40.000 7.80 0.00 35.38 2.90
4390 7646 3.348119 TGCAAACACAGTCACCAAACTA 58.652 40.909 0.00 0.00 0.00 2.24
4401 7657 3.581024 ATGGTTATGCTGCAAACACAG 57.419 42.857 20.81 0.00 40.80 3.66
4518 7775 5.345702 TCGAAGTAAACCTTATCATGGTCG 58.654 41.667 0.00 0.00 36.69 4.79
4580 7837 6.052360 GGAATCTAAATGGAGAACTGAGGTC 58.948 44.000 0.00 0.00 0.00 3.85
4670 7927 7.599998 ACAATTTTTGCCAAGCAGTTTAGATAG 59.400 33.333 0.00 0.00 40.61 2.08
4700 7957 7.803079 ACTATCGTGAACATCGAATATCATG 57.197 36.000 9.43 9.43 40.61 3.07
4702 7959 9.177304 GTTAACTATCGTGAACATCGAATATCA 57.823 33.333 0.00 0.00 40.61 2.15
4783 9564 1.781786 TATTTGCTCGCCTCCTCTCT 58.218 50.000 0.00 0.00 0.00 3.10
4793 9574 4.031418 TGCCAAATCACATATTTGCTCG 57.969 40.909 5.19 0.00 37.60 5.03
4882 9721 3.496331 TGGTTCAGAAAAGGGAACATCC 58.504 45.455 6.82 0.00 43.96 3.51
4883 9722 4.262036 GGTTGGTTCAGAAAAGGGAACATC 60.262 45.833 6.82 0.00 43.96 3.06
4988 9842 3.188048 GGATTATATCTCCGTGTCGTCGT 59.812 47.826 0.00 0.00 0.00 4.34
5041 9895 2.917227 TGTCGTCTGCTCTGCCCA 60.917 61.111 0.00 0.00 0.00 5.36
5112 9970 7.989416 ATTGTTTTCATGAAATGCAAGGATT 57.011 28.000 27.31 16.81 46.21 3.01
5268 10138 0.169672 CTTTCCGCACTGCCAAGATG 59.830 55.000 0.00 0.00 0.00 2.90
5282 10152 4.386049 CGTATGTTGCGGATCTATCTTTCC 59.614 45.833 0.00 0.00 0.00 3.13
5430 10309 4.098894 ACAAGCAAATGATCCCAATTCCT 58.901 39.130 0.00 0.00 0.00 3.36
5505 10384 0.879765 CCCTTCTCAGCAGCTTGTTG 59.120 55.000 0.00 0.00 0.00 3.33
5547 10426 3.644823 CTTGCTGTGATTTGCATGTTCA 58.355 40.909 0.00 0.00 39.07 3.18
5552 10431 5.221185 CCTTATAGCTTGCTGTGATTTGCAT 60.221 40.000 5.26 0.00 39.07 3.96
5561 10440 0.183731 GGCCCCTTATAGCTTGCTGT 59.816 55.000 5.26 0.90 0.00 4.40
5581 10460 6.491714 TTCCTATTGAAGAGAGATCCCTTG 57.508 41.667 0.00 0.00 0.00 3.61
5582 10461 7.421147 CCATTTCCTATTGAAGAGAGATCCCTT 60.421 40.741 0.00 0.00 33.63 3.95
5625 10512 3.444388 ACCACACACAACGTTAACCAATT 59.556 39.130 0.00 0.00 0.00 2.32
5626 10513 3.018149 ACCACACACAACGTTAACCAAT 58.982 40.909 0.00 0.00 0.00 3.16
5628 10515 1.738350 CACCACACACAACGTTAACCA 59.262 47.619 0.00 0.00 0.00 3.67
5629 10516 1.532298 GCACCACACACAACGTTAACC 60.532 52.381 0.00 0.00 0.00 2.85
5630 10517 1.130749 TGCACCACACACAACGTTAAC 59.869 47.619 0.00 0.00 0.00 2.01
5631 10518 1.450025 TGCACCACACACAACGTTAA 58.550 45.000 0.00 0.00 0.00 2.01
5632 10519 1.669604 ATGCACCACACACAACGTTA 58.330 45.000 0.00 0.00 0.00 3.18
5634 10521 1.601903 CTTATGCACCACACACAACGT 59.398 47.619 0.00 0.00 0.00 3.99
5635 10522 1.662876 GCTTATGCACCACACACAACG 60.663 52.381 0.00 0.00 39.41 4.10
5636 10523 1.336440 TGCTTATGCACCACACACAAC 59.664 47.619 0.00 0.00 45.31 3.32
5637 10524 1.685148 TGCTTATGCACCACACACAA 58.315 45.000 0.00 0.00 45.31 3.33
5648 10535 2.715737 TTCAAACCCGTTGCTTATGC 57.284 45.000 0.00 0.00 37.13 3.14
5649 10536 3.428862 GGGATTCAAACCCGTTGCTTATG 60.429 47.826 0.00 0.00 37.85 1.90
5650 10537 2.758423 GGGATTCAAACCCGTTGCTTAT 59.242 45.455 0.00 0.00 37.85 1.73
5651 10538 2.164338 GGGATTCAAACCCGTTGCTTA 58.836 47.619 0.00 0.00 37.85 3.09
5652 10539 0.966179 GGGATTCAAACCCGTTGCTT 59.034 50.000 0.00 0.00 37.85 3.91
5653 10540 2.653557 GGGATTCAAACCCGTTGCT 58.346 52.632 0.00 0.00 37.85 3.91
5660 10547 3.740832 CGCAAAAGAAAGGGATTCAAACC 59.259 43.478 0.00 0.00 40.72 3.27
5661 10548 4.368315 ACGCAAAAGAAAGGGATTCAAAC 58.632 39.130 0.00 0.00 40.72 2.93
5662 10549 4.664150 ACGCAAAAGAAAGGGATTCAAA 57.336 36.364 0.00 0.00 40.72 2.69
5663 10550 4.580995 TGTACGCAAAAGAAAGGGATTCAA 59.419 37.500 0.00 0.00 40.72 2.69
5664 10551 4.138290 TGTACGCAAAAGAAAGGGATTCA 58.862 39.130 0.00 0.00 40.72 2.57
5665 10552 4.759516 TGTACGCAAAAGAAAGGGATTC 57.240 40.909 0.00 0.00 38.39 2.52
5666 10553 4.522789 ACATGTACGCAAAAGAAAGGGATT 59.477 37.500 0.00 0.00 0.00 3.01
5667 10554 4.079253 ACATGTACGCAAAAGAAAGGGAT 58.921 39.130 0.00 0.00 0.00 3.85
5668 10555 3.482436 ACATGTACGCAAAAGAAAGGGA 58.518 40.909 0.00 0.00 0.00 4.20
5669 10556 3.915437 ACATGTACGCAAAAGAAAGGG 57.085 42.857 0.00 0.00 0.00 3.95
5670 10557 5.851177 CAGTAACATGTACGCAAAAGAAAGG 59.149 40.000 0.00 0.00 0.00 3.11
5671 10558 6.655062 TCAGTAACATGTACGCAAAAGAAAG 58.345 36.000 0.00 0.00 0.00 2.62
5672 10559 6.606234 TCAGTAACATGTACGCAAAAGAAA 57.394 33.333 0.00 0.00 0.00 2.52
5673 10560 6.259167 AGTTCAGTAACATGTACGCAAAAGAA 59.741 34.615 0.00 0.00 38.12 2.52
5674 10561 5.756347 AGTTCAGTAACATGTACGCAAAAGA 59.244 36.000 0.00 0.00 38.12 2.52
5675 10562 5.985781 AGTTCAGTAACATGTACGCAAAAG 58.014 37.500 0.00 0.00 38.12 2.27
5676 10563 5.756347 AGAGTTCAGTAACATGTACGCAAAA 59.244 36.000 0.00 0.00 38.12 2.44
5677 10564 5.176774 CAGAGTTCAGTAACATGTACGCAAA 59.823 40.000 0.00 0.00 38.12 3.68
5678 10565 4.684242 CAGAGTTCAGTAACATGTACGCAA 59.316 41.667 0.00 0.00 38.12 4.85
5679 10566 4.234574 CAGAGTTCAGTAACATGTACGCA 58.765 43.478 0.00 0.00 38.12 5.24
5680 10567 3.612860 CCAGAGTTCAGTAACATGTACGC 59.387 47.826 0.00 0.00 38.12 4.42
5681 10568 4.174009 CCCAGAGTTCAGTAACATGTACG 58.826 47.826 0.00 0.00 38.12 3.67
5682 10569 4.929808 CACCCAGAGTTCAGTAACATGTAC 59.070 45.833 0.00 0.00 38.12 2.90
5683 10570 4.591498 ACACCCAGAGTTCAGTAACATGTA 59.409 41.667 0.00 0.00 38.12 2.29
5684 10571 3.391296 ACACCCAGAGTTCAGTAACATGT 59.609 43.478 0.00 0.00 38.12 3.21
5685 10572 3.997021 GACACCCAGAGTTCAGTAACATG 59.003 47.826 0.00 0.00 38.12 3.21
5686 10573 3.904339 AGACACCCAGAGTTCAGTAACAT 59.096 43.478 0.00 0.00 38.12 2.71
5687 10574 3.305720 AGACACCCAGAGTTCAGTAACA 58.694 45.455 0.00 0.00 38.12 2.41
5688 10575 4.058817 CAAGACACCCAGAGTTCAGTAAC 58.941 47.826 0.00 0.00 35.72 2.50
5692 10579 1.202687 TGCAAGACACCCAGAGTTCAG 60.203 52.381 0.00 0.00 0.00 3.02
5710 10597 3.179048 GGATTCAAACCGTTGCTTATGC 58.821 45.455 0.00 0.00 40.20 3.14
5736 10623 8.477256 CCCCAATGAAGTAAATGAATACAACAT 58.523 33.333 0.00 0.00 0.00 2.71
5743 10630 6.040842 CGAATCCCCCAATGAAGTAAATGAAT 59.959 38.462 0.00 0.00 0.00 2.57
5749 10636 2.092103 CCCGAATCCCCCAATGAAGTAA 60.092 50.000 0.00 0.00 0.00 2.24
5750 10637 1.493022 CCCGAATCCCCCAATGAAGTA 59.507 52.381 0.00 0.00 0.00 2.24
5751 10638 0.258774 CCCGAATCCCCCAATGAAGT 59.741 55.000 0.00 0.00 0.00 3.01
5752 10639 0.468029 CCCCGAATCCCCCAATGAAG 60.468 60.000 0.00 0.00 0.00 3.02
5753 10640 1.618030 CCCCGAATCCCCCAATGAA 59.382 57.895 0.00 0.00 0.00 2.57
5754 10641 2.391130 CCCCCGAATCCCCCAATGA 61.391 63.158 0.00 0.00 0.00 2.57
5755 10642 2.198426 CCCCCGAATCCCCCAATG 59.802 66.667 0.00 0.00 0.00 2.82
5756 10643 2.287661 ACCCCCGAATCCCCCAAT 60.288 61.111 0.00 0.00 0.00 3.16
5757 10644 3.343326 CACCCCCGAATCCCCCAA 61.343 66.667 0.00 0.00 0.00 4.12
5758 10645 4.686437 ACACCCCCGAATCCCCCA 62.686 66.667 0.00 0.00 0.00 4.96
5759 10646 4.123545 CACACCCCCGAATCCCCC 62.124 72.222 0.00 0.00 0.00 5.40
5760 10647 1.979619 CTACACACCCCCGAATCCCC 61.980 65.000 0.00 0.00 0.00 4.81
5761 10648 0.979187 TCTACACACCCCCGAATCCC 60.979 60.000 0.00 0.00 0.00 3.85
5762 10649 1.129058 ATCTACACACCCCCGAATCC 58.871 55.000 0.00 0.00 0.00 3.01
5763 10650 2.169769 TGAATCTACACACCCCCGAATC 59.830 50.000 0.00 0.00 0.00 2.52
5764 10651 2.193127 TGAATCTACACACCCCCGAAT 58.807 47.619 0.00 0.00 0.00 3.34
5765 10652 1.646912 TGAATCTACACACCCCCGAA 58.353 50.000 0.00 0.00 0.00 4.30
5766 10653 1.484653 CATGAATCTACACACCCCCGA 59.515 52.381 0.00 0.00 0.00 5.14
5767 10654 1.475034 CCATGAATCTACACACCCCCG 60.475 57.143 0.00 0.00 0.00 5.73
5768 10655 1.750682 GCCATGAATCTACACACCCCC 60.751 57.143 0.00 0.00 0.00 5.40
5769 10656 1.064758 TGCCATGAATCTACACACCCC 60.065 52.381 0.00 0.00 0.00 4.95
5770 10657 2.017049 GTGCCATGAATCTACACACCC 58.983 52.381 0.00 0.00 0.00 4.61
5771 10658 2.991250 AGTGCCATGAATCTACACACC 58.009 47.619 0.00 0.00 33.69 4.16
5772 10659 4.256920 AGAAGTGCCATGAATCTACACAC 58.743 43.478 0.00 0.00 33.69 3.82
5773 10660 4.558226 AGAAGTGCCATGAATCTACACA 57.442 40.909 0.00 0.00 33.69 3.72
5774 10661 7.066284 ACAATAAGAAGTGCCATGAATCTACAC 59.934 37.037 0.00 0.00 0.00 2.90
5775 10662 7.112122 ACAATAAGAAGTGCCATGAATCTACA 58.888 34.615 0.00 0.00 0.00 2.74
5776 10663 7.559590 ACAATAAGAAGTGCCATGAATCTAC 57.440 36.000 0.00 0.00 0.00 2.59
5777 10664 9.851686 AATACAATAAGAAGTGCCATGAATCTA 57.148 29.630 0.00 0.00 0.00 1.98
5778 10665 8.627403 CAATACAATAAGAAGTGCCATGAATCT 58.373 33.333 0.00 0.00 0.00 2.40
5779 10666 8.408601 ACAATACAATAAGAAGTGCCATGAATC 58.591 33.333 0.00 0.00 0.00 2.52
5780 10667 8.297470 ACAATACAATAAGAAGTGCCATGAAT 57.703 30.769 0.00 0.00 0.00 2.57
5781 10668 7.701539 ACAATACAATAAGAAGTGCCATGAA 57.298 32.000 0.00 0.00 0.00 2.57
5782 10669 8.046708 AGTACAATACAATAAGAAGTGCCATGA 58.953 33.333 0.00 0.00 0.00 3.07
5783 10670 8.213518 AGTACAATACAATAAGAAGTGCCATG 57.786 34.615 0.00 0.00 0.00 3.66
5784 10671 8.677300 CAAGTACAATACAATAAGAAGTGCCAT 58.323 33.333 0.00 0.00 0.00 4.40
5785 10672 7.663905 ACAAGTACAATACAATAAGAAGTGCCA 59.336 33.333 0.00 0.00 0.00 4.92
5786 10673 7.962918 CACAAGTACAATACAATAAGAAGTGCC 59.037 37.037 0.00 0.00 0.00 5.01
5787 10674 7.481798 GCACAAGTACAATACAATAAGAAGTGC 59.518 37.037 0.00 0.00 38.34 4.40
5788 10675 8.721478 AGCACAAGTACAATACAATAAGAAGTG 58.279 33.333 0.00 0.00 0.00 3.16
5789 10676 8.848474 AGCACAAGTACAATACAATAAGAAGT 57.152 30.769 0.00 0.00 0.00 3.01
5790 10677 8.935844 TGAGCACAAGTACAATACAATAAGAAG 58.064 33.333 0.00 0.00 0.00 2.85
5791 10678 8.840833 TGAGCACAAGTACAATACAATAAGAA 57.159 30.769 0.00 0.00 0.00 2.52
5792 10679 7.064609 GCTGAGCACAAGTACAATACAATAAGA 59.935 37.037 0.00 0.00 0.00 2.10
5793 10680 7.065085 AGCTGAGCACAAGTACAATACAATAAG 59.935 37.037 7.39 0.00 0.00 1.73
5794 10681 6.878923 AGCTGAGCACAAGTACAATACAATAA 59.121 34.615 7.39 0.00 0.00 1.40
5795 10682 6.406370 AGCTGAGCACAAGTACAATACAATA 58.594 36.000 7.39 0.00 0.00 1.90
5796 10683 5.248640 AGCTGAGCACAAGTACAATACAAT 58.751 37.500 7.39 0.00 0.00 2.71
5797 10684 4.641396 AGCTGAGCACAAGTACAATACAA 58.359 39.130 7.39 0.00 0.00 2.41
5798 10685 4.245660 GAGCTGAGCACAAGTACAATACA 58.754 43.478 7.39 0.00 0.00 2.29
5799 10686 4.245660 TGAGCTGAGCACAAGTACAATAC 58.754 43.478 7.39 0.00 0.00 1.89
5800 10687 4.535526 TGAGCTGAGCACAAGTACAATA 57.464 40.909 7.39 0.00 0.00 1.90
5801 10688 3.407424 TGAGCTGAGCACAAGTACAAT 57.593 42.857 7.39 0.00 0.00 2.71
5802 10689 2.908688 TGAGCTGAGCACAAGTACAA 57.091 45.000 7.39 0.00 0.00 2.41
5803 10690 3.069289 CAATGAGCTGAGCACAAGTACA 58.931 45.455 8.93 0.00 32.39 2.90
5804 10691 2.417933 CCAATGAGCTGAGCACAAGTAC 59.582 50.000 8.93 0.00 32.39 2.73
5805 10692 2.302733 TCCAATGAGCTGAGCACAAGTA 59.697 45.455 8.93 0.00 32.39 2.24
5806 10693 1.072806 TCCAATGAGCTGAGCACAAGT 59.927 47.619 8.93 0.00 32.39 3.16
5807 10694 1.817357 TCCAATGAGCTGAGCACAAG 58.183 50.000 8.93 4.79 32.39 3.16
5808 10695 2.156917 CTTCCAATGAGCTGAGCACAA 58.843 47.619 8.93 0.00 32.39 3.33
5809 10696 1.072806 ACTTCCAATGAGCTGAGCACA 59.927 47.619 7.09 7.09 33.26 4.57
5810 10697 1.818642 ACTTCCAATGAGCTGAGCAC 58.181 50.000 7.39 0.00 0.00 4.40
5811 10698 3.701205 TTACTTCCAATGAGCTGAGCA 57.299 42.857 7.39 0.00 0.00 4.26
5812 10699 5.238214 CCTTATTACTTCCAATGAGCTGAGC 59.762 44.000 0.00 0.00 0.00 4.26
5813 10700 6.259608 CACCTTATTACTTCCAATGAGCTGAG 59.740 42.308 0.00 0.00 0.00 3.35
5814 10701 6.115446 CACCTTATTACTTCCAATGAGCTGA 58.885 40.000 0.00 0.00 0.00 4.26
5815 10702 5.297776 CCACCTTATTACTTCCAATGAGCTG 59.702 44.000 0.00 0.00 0.00 4.24
5816 10703 5.191722 TCCACCTTATTACTTCCAATGAGCT 59.808 40.000 0.00 0.00 0.00 4.09
5817 10704 5.437060 TCCACCTTATTACTTCCAATGAGC 58.563 41.667 0.00 0.00 0.00 4.26
5818 10705 7.282585 TCATCCACCTTATTACTTCCAATGAG 58.717 38.462 0.00 0.00 0.00 2.90
5819 10706 7.127186 TCTCATCCACCTTATTACTTCCAATGA 59.873 37.037 0.00 0.00 0.00 2.57
5820 10707 7.282585 TCTCATCCACCTTATTACTTCCAATG 58.717 38.462 0.00 0.00 0.00 2.82
5821 10708 7.348274 TCTCTCATCCACCTTATTACTTCCAAT 59.652 37.037 0.00 0.00 0.00 3.16
5822 10709 6.672218 TCTCTCATCCACCTTATTACTTCCAA 59.328 38.462 0.00 0.00 0.00 3.53
5823 10710 6.202331 TCTCTCATCCACCTTATTACTTCCA 58.798 40.000 0.00 0.00 0.00 3.53
5824 10711 6.732896 TCTCTCATCCACCTTATTACTTCC 57.267 41.667 0.00 0.00 0.00 3.46
5831 10718 9.163894 TGATCTTATTTCTCTCATCCACCTTAT 57.836 33.333 0.00 0.00 0.00 1.73
5832 10719 8.553085 TGATCTTATTTCTCTCATCCACCTTA 57.447 34.615 0.00 0.00 0.00 2.69
5833 10720 7.443302 TGATCTTATTTCTCTCATCCACCTT 57.557 36.000 0.00 0.00 0.00 3.50
5834 10721 7.443302 TTGATCTTATTTCTCTCATCCACCT 57.557 36.000 0.00 0.00 0.00 4.00
5835 10722 7.012799 GGTTTGATCTTATTTCTCTCATCCACC 59.987 40.741 0.00 0.00 0.00 4.61
5836 10723 7.554118 TGGTTTGATCTTATTTCTCTCATCCAC 59.446 37.037 0.00 0.00 0.00 4.02
5837 10724 7.632861 TGGTTTGATCTTATTTCTCTCATCCA 58.367 34.615 0.00 0.00 0.00 3.41
5838 10725 7.255070 GCTGGTTTGATCTTATTTCTCTCATCC 60.255 40.741 0.00 0.00 0.00 3.51
5839 10726 7.255070 GGCTGGTTTGATCTTATTTCTCTCATC 60.255 40.741 0.00 0.00 0.00 2.92
5840 10727 6.545298 GGCTGGTTTGATCTTATTTCTCTCAT 59.455 38.462 0.00 0.00 0.00 2.90
5841 10728 5.882557 GGCTGGTTTGATCTTATTTCTCTCA 59.117 40.000 0.00 0.00 0.00 3.27
5842 10729 5.882557 TGGCTGGTTTGATCTTATTTCTCTC 59.117 40.000 0.00 0.00 0.00 3.20
5843 10730 5.819991 TGGCTGGTTTGATCTTATTTCTCT 58.180 37.500 0.00 0.00 0.00 3.10
5844 10731 6.515272 TTGGCTGGTTTGATCTTATTTCTC 57.485 37.500 0.00 0.00 0.00 2.87
5845 10732 6.916360 TTTGGCTGGTTTGATCTTATTTCT 57.084 33.333 0.00 0.00 0.00 2.52
5846 10733 7.378181 TCTTTTGGCTGGTTTGATCTTATTTC 58.622 34.615 0.00 0.00 0.00 2.17
5847 10734 7.301868 TCTTTTGGCTGGTTTGATCTTATTT 57.698 32.000 0.00 0.00 0.00 1.40
5848 10735 6.916360 TCTTTTGGCTGGTTTGATCTTATT 57.084 33.333 0.00 0.00 0.00 1.40
5849 10736 6.894103 AGATCTTTTGGCTGGTTTGATCTTAT 59.106 34.615 0.00 0.00 36.71 1.73
5850 10737 6.151648 CAGATCTTTTGGCTGGTTTGATCTTA 59.848 38.462 0.00 0.00 37.61 2.10
5851 10738 5.047519 CAGATCTTTTGGCTGGTTTGATCTT 60.048 40.000 0.00 0.00 37.61 2.40
5852 10739 4.461781 CAGATCTTTTGGCTGGTTTGATCT 59.538 41.667 0.00 0.00 39.47 2.75
5853 10740 4.381292 CCAGATCTTTTGGCTGGTTTGATC 60.381 45.833 0.00 0.00 43.25 2.92
5854 10741 3.512724 CCAGATCTTTTGGCTGGTTTGAT 59.487 43.478 0.00 0.00 43.25 2.57
5855 10742 2.892852 CCAGATCTTTTGGCTGGTTTGA 59.107 45.455 0.00 0.00 43.25 2.69
5856 10743 3.308438 CCAGATCTTTTGGCTGGTTTG 57.692 47.619 0.00 0.00 43.25 2.93
5861 10748 1.467920 GGGACCAGATCTTTTGGCTG 58.532 55.000 0.00 0.00 39.39 4.85
5862 10749 3.987594 GGGACCAGATCTTTTGGCT 57.012 52.632 0.00 0.00 39.39 4.75
5876 10763 2.041405 CTGGGAGAGGGAGGGGAC 60.041 72.222 0.00 0.00 0.00 4.46
5877 10764 2.540910 ACTGGGAGAGGGAGGGGA 60.541 66.667 0.00 0.00 0.00 4.81
5878 10765 2.041405 GACTGGGAGAGGGAGGGG 60.041 72.222 0.00 0.00 0.00 4.79
5879 10766 2.443016 CGACTGGGAGAGGGAGGG 60.443 72.222 0.00 0.00 0.00 4.30
5880 10767 1.755008 GTCGACTGGGAGAGGGAGG 60.755 68.421 8.70 0.00 0.00 4.30
5881 10768 2.115911 CGTCGACTGGGAGAGGGAG 61.116 68.421 14.70 0.00 0.00 4.30
5882 10769 2.045242 CGTCGACTGGGAGAGGGA 60.045 66.667 14.70 0.00 0.00 4.20
5883 10770 3.141488 CCGTCGACTGGGAGAGGG 61.141 72.222 14.70 0.36 36.30 4.30
5884 10771 2.361357 ACCGTCGACTGGGAGAGG 60.361 66.667 23.77 14.45 0.00 3.69
5885 10772 2.751913 CGACCGTCGACTGGGAGAG 61.752 68.421 23.77 12.07 43.74 3.20
5886 10773 2.745100 CGACCGTCGACTGGGAGA 60.745 66.667 23.77 0.00 43.74 3.71
5887 10774 2.524636 GAACGACCGTCGACTGGGAG 62.525 65.000 27.03 19.42 43.74 4.30
5888 10775 2.595463 AACGACCGTCGACTGGGA 60.595 61.111 27.03 0.00 43.74 4.37
5889 10776 2.126580 GAACGACCGTCGACTGGG 60.127 66.667 27.03 16.92 43.74 4.45
5890 10777 2.126580 GGAACGACCGTCGACTGG 60.127 66.667 27.03 20.16 43.74 4.00
5891 10778 2.126580 GGGAACGACCGTCGACTG 60.127 66.667 27.03 9.99 43.74 3.51
5892 10779 2.595463 TGGGAACGACCGTCGACT 60.595 61.111 27.03 13.32 43.74 4.18
5893 10780 2.429739 GTGGGAACGACCGTCGAC 60.430 66.667 27.03 18.30 43.74 4.20
5894 10781 4.029186 CGTGGGAACGACCGTCGA 62.029 66.667 27.03 1.26 43.74 4.20
5895 10782 3.940975 CTCGTGGGAACGACCGTCG 62.941 68.421 19.24 19.24 46.93 5.12
5896 10783 2.126580 CTCGTGGGAACGACCGTC 60.127 66.667 0.00 0.00 40.11 4.79
5897 10784 4.353437 GCTCGTGGGAACGACCGT 62.353 66.667 0.00 0.00 40.11 4.83
5899 10786 4.047059 TCGCTCGTGGGAACGACC 62.047 66.667 1.35 0.00 35.98 4.79
5901 10788 4.047059 GGTCGCTCGTGGGAACGA 62.047 66.667 5.77 0.62 38.35 3.85
5911 10798 2.951101 TTTTCCCTCCGGGTCGCTC 61.951 63.158 0.00 0.00 44.74 5.03
5912 10799 2.926242 TTTTCCCTCCGGGTCGCT 60.926 61.111 0.00 0.00 44.74 4.93
5913 10800 2.745100 GTTTTCCCTCCGGGTCGC 60.745 66.667 0.00 0.00 44.74 5.19
5914 10801 2.046604 GGTTTTCCCTCCGGGTCG 60.047 66.667 0.00 0.00 44.74 4.79
5924 10811 0.952010 TCGTTGCGCTAGGGTTTTCC 60.952 55.000 9.73 0.00 39.75 3.13
5925 10812 0.165295 GTCGTTGCGCTAGGGTTTTC 59.835 55.000 9.73 0.00 0.00 2.29
5926 10813 1.562575 CGTCGTTGCGCTAGGGTTTT 61.563 55.000 9.73 0.00 0.00 2.43
5927 10814 2.025418 CGTCGTTGCGCTAGGGTTT 61.025 57.895 9.73 0.00 0.00 3.27
5928 10815 2.431942 CGTCGTTGCGCTAGGGTT 60.432 61.111 9.73 0.00 0.00 4.11
5938 10825 4.986587 TCCACCGTCGCGTCGTTG 62.987 66.667 23.01 19.27 0.00 4.10
5939 10826 4.695231 CTCCACCGTCGCGTCGTT 62.695 66.667 23.01 7.56 0.00 3.85
5947 10834 3.391382 CTGACCCCCTCCACCGTC 61.391 72.222 0.00 0.00 0.00 4.79
5972 10859 0.540365 ACACCACAAAGCCCATCAGG 60.540 55.000 0.00 0.00 39.47 3.86
5973 10860 0.883833 GACACCACAAAGCCCATCAG 59.116 55.000 0.00 0.00 0.00 2.90
5974 10861 0.184692 TGACACCACAAAGCCCATCA 59.815 50.000 0.00 0.00 0.00 3.07
5975 10862 1.203052 CATGACACCACAAAGCCCATC 59.797 52.381 0.00 0.00 0.00 3.51
5976 10863 1.259609 CATGACACCACAAAGCCCAT 58.740 50.000 0.00 0.00 0.00 4.00
5977 10864 1.462731 GCATGACACCACAAAGCCCA 61.463 55.000 0.00 0.00 0.00 5.36
5978 10865 1.290009 GCATGACACCACAAAGCCC 59.710 57.895 0.00 0.00 0.00 5.19
5979 10866 0.604578 ATGCATGACACCACAAAGCC 59.395 50.000 0.00 0.00 0.00 4.35
5980 10867 1.000060 ACATGCATGACACCACAAAGC 60.000 47.619 32.75 0.00 0.00 3.51
5981 10868 2.555325 AGACATGCATGACACCACAAAG 59.445 45.455 32.75 1.99 0.00 2.77
5982 10869 2.585330 AGACATGCATGACACCACAAA 58.415 42.857 32.75 0.00 0.00 2.83
5983 10870 2.275134 AGACATGCATGACACCACAA 57.725 45.000 32.75 0.00 0.00 3.33
5984 10871 1.881324 CAAGACATGCATGACACCACA 59.119 47.619 32.75 0.00 0.00 4.17
5985 10872 1.881973 ACAAGACATGCATGACACCAC 59.118 47.619 32.75 14.95 0.00 4.16
5986 10873 1.881324 CACAAGACATGCATGACACCA 59.119 47.619 32.75 0.00 0.00 4.17
5987 10874 1.401931 GCACAAGACATGCATGACACC 60.402 52.381 32.75 17.13 42.88 4.16
5988 10875 1.973138 GCACAAGACATGCATGACAC 58.027 50.000 32.75 20.99 42.88 3.67
5995 10882 1.135489 CACTCCATGCACAAGACATGC 60.135 52.381 0.00 0.00 42.89 4.06
5996 10883 1.471287 CCACTCCATGCACAAGACATG 59.529 52.381 0.00 0.00 43.67 3.21
5997 10884 1.830279 CCACTCCATGCACAAGACAT 58.170 50.000 0.00 0.00 0.00 3.06
5998 10885 0.890542 GCCACTCCATGCACAAGACA 60.891 55.000 0.00 0.00 0.00 3.41
5999 10886 1.878775 GCCACTCCATGCACAAGAC 59.121 57.895 0.00 0.00 0.00 3.01
6000 10887 1.672030 CGCCACTCCATGCACAAGA 60.672 57.895 0.00 0.00 0.00 3.02
6001 10888 2.693762 CCGCCACTCCATGCACAAG 61.694 63.158 0.00 0.00 0.00 3.16
6002 10889 2.672651 CCGCCACTCCATGCACAA 60.673 61.111 0.00 0.00 0.00 3.33
6034 10921 0.924090 CGAATAGGAGCACGCTTCAC 59.076 55.000 0.00 0.00 0.00 3.18
6035 10922 0.806102 GCGAATAGGAGCACGCTTCA 60.806 55.000 0.00 0.00 46.06 3.02
6036 10923 1.927931 GCGAATAGGAGCACGCTTC 59.072 57.895 0.00 0.00 46.06 3.86
6037 10924 4.110493 GCGAATAGGAGCACGCTT 57.890 55.556 0.00 0.00 46.06 4.68
6040 10927 3.330853 GCGGCGAATAGGAGCACG 61.331 66.667 12.98 0.00 34.54 5.34
6041 10928 1.951631 GAGCGGCGAATAGGAGCAC 60.952 63.158 12.98 0.00 34.54 4.40
6042 10929 2.076622 GAGAGCGGCGAATAGGAGCA 62.077 60.000 12.98 0.00 34.54 4.26
6090 10977 3.712881 GCCCAGTTCGACACACGC 61.713 66.667 0.00 0.00 42.26 5.34
6092 10979 2.668550 GGGCCCAGTTCGACACAC 60.669 66.667 19.95 0.00 0.00 3.82
6109 10996 3.649073 TCGTTCACTATATTCATGGGCG 58.351 45.455 0.00 0.00 0.00 6.13
6124 11011 2.232296 ACGCGCTTTCGTTCGTTCA 61.232 52.632 5.73 0.00 40.07 3.18
6142 11029 6.655062 CGATGGCGAATATTTTTAGCTACAA 58.345 36.000 0.00 0.00 40.82 2.41
6143 11030 5.333798 GCGATGGCGAATATTTTTAGCTACA 60.334 40.000 0.00 0.00 40.82 2.74
6155 11042 2.143122 GAATTCCAGCGATGGCGAATA 58.857 47.619 16.69 0.00 46.35 1.75
6160 11048 0.732571 TTTCGAATTCCAGCGATGGC 59.267 50.000 16.69 0.00 36.31 4.40
6162 11050 1.737236 TGGTTTCGAATTCCAGCGATG 59.263 47.619 15.53 0.00 36.31 3.84
6163 11051 2.009774 CTGGTTTCGAATTCCAGCGAT 58.990 47.619 25.88 0.00 41.46 4.58
6168 11056 3.181449 TGAGGTTCTGGTTTCGAATTCCA 60.181 43.478 17.57 17.57 0.00 3.53
6208 11096 4.184629 GACTGCTAGGTTAACTGATGGTG 58.815 47.826 5.42 0.00 0.00 4.17
6211 11099 4.111375 ACGACTGCTAGGTTAACTGATG 57.889 45.455 5.42 0.00 0.00 3.07
6213 11101 4.763793 AGTAACGACTGCTAGGTTAACTGA 59.236 41.667 5.42 0.00 33.41 3.41
6241 11129 0.623324 TAAGGGTGGGGCTGCACTAT 60.623 55.000 0.21 0.00 0.00 2.12
6244 11132 1.228737 TTTAAGGGTGGGGCTGCAC 60.229 57.895 0.50 0.00 0.00 4.57
6251 11139 2.890945 CTGTTGGTTCTTTAAGGGTGGG 59.109 50.000 0.00 0.00 0.00 4.61
6259 11147 2.356382 CGTGTTGCCTGTTGGTTCTTTA 59.644 45.455 0.00 0.00 35.27 1.85
6276 11164 8.677148 AAGCAAGATATATTTTGGATACGTGT 57.323 30.769 15.61 0.00 42.51 4.49
6328 11217 6.511416 TGTTTGTGTTTCACATATCCCTTTG 58.489 36.000 3.43 0.00 44.16 2.77
6329 11218 6.723298 TGTTTGTGTTTCACATATCCCTTT 57.277 33.333 3.43 0.00 44.16 3.11
6420 11309 5.132897 TGGAATTTCAAAAGATGTTCCCG 57.867 39.130 0.00 0.00 33.04 5.14
6475 11367 7.930217 TGTTTGGTTTCAAATTTTGTTCACAA 58.070 26.923 8.89 8.03 43.73 3.33
6491 11383 6.767423 CCAGGAGATTCAAAATTGTTTGGTTT 59.233 34.615 0.00 0.00 43.70 3.27
6495 11387 8.436046 TTTTCCAGGAGATTCAAAATTGTTTG 57.564 30.769 0.00 0.00 44.71 2.93
6496 11388 9.631257 ATTTTTCCAGGAGATTCAAAATTGTTT 57.369 25.926 3.73 0.00 0.00 2.83
6505 11397 7.358770 TGTTTTCATTTTTCCAGGAGATTCA 57.641 32.000 0.00 0.00 0.00 2.57
6506 11398 7.148523 GCATGTTTTCATTTTTCCAGGAGATTC 60.149 37.037 0.00 0.00 38.64 2.52
6550 11442 8.747471 ACATGTTCCCATTTTCAAAAATTGTTT 58.253 25.926 0.00 0.00 36.52 2.83
6605 11497 4.261155 CGCAAATTTGAAGAACTGTCTCCA 60.261 41.667 22.31 0.00 30.70 3.86
6607 11499 4.024048 TCCGCAAATTTGAAGAACTGTCTC 60.024 41.667 22.31 0.00 30.70 3.36
6609 11501 3.975035 GTCCGCAAATTTGAAGAACTGTC 59.025 43.478 22.31 0.00 0.00 3.51
6722 11616 9.261318 GTGCTTTTGAATTTTGTTTGTAGTTTC 57.739 29.630 0.00 0.00 0.00 2.78
6723 11617 7.954786 CGTGCTTTTGAATTTTGTTTGTAGTTT 59.045 29.630 0.00 0.00 0.00 2.66
6728 11622 6.073548 TGTTCGTGCTTTTGAATTTTGTTTGT 60.074 30.769 0.00 0.00 0.00 2.83
6730 11624 6.473397 TGTTCGTGCTTTTGAATTTTGTTT 57.527 29.167 0.00 0.00 0.00 2.83
6740 11634 8.673626 AGATACAAAATATGTTCGTGCTTTTG 57.326 30.769 0.00 0.00 43.63 2.44
6799 11693 9.820229 GGGTTTTCAAATTTTATTCGGAATTTC 57.180 29.630 8.76 0.00 34.25 2.17
6802 11696 7.329962 GTCGGGTTTTCAAATTTTATTCGGAAT 59.670 33.333 8.49 8.49 0.00 3.01
6804 11698 6.151004 GTCGGGTTTTCAAATTTTATTCGGA 58.849 36.000 0.00 0.00 0.00 4.55
6805 11699 5.346551 GGTCGGGTTTTCAAATTTTATTCGG 59.653 40.000 0.00 0.00 0.00 4.30
6810 11704 8.507524 AAAAATGGTCGGGTTTTCAAATTTTA 57.492 26.923 0.00 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.