Multiple sequence alignment - TraesCS5B01G462800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G462800 chr5B 100.000 3020 0 0 1 3020 638337986 638334967 0.000000e+00 5578.0
1 TraesCS5B01G462800 chr5B 98.653 1856 25 0 1 1856 638346280 638344425 0.000000e+00 3290.0
2 TraesCS5B01G462800 chr5B 91.775 1228 55 13 649 1856 638353908 638352707 0.000000e+00 1666.0
3 TraesCS5B01G462800 chr5B 87.592 1217 121 18 667 1856 638398233 638397020 0.000000e+00 1384.0
4 TraesCS5B01G462800 chr5B 82.606 1443 170 45 958 2363 638364030 638362632 0.000000e+00 1199.0
5 TraesCS5B01G462800 chr5B 91.275 596 45 5 1 591 685617073 685617666 0.000000e+00 806.0
6 TraesCS5B01G462800 chr5B 78.489 609 81 31 1867 2455 638352667 638352089 1.330000e-93 353.0
7 TraesCS5B01G462800 chr5B 78.325 609 81 32 1867 2455 638344385 638343808 2.230000e-91 346.0
8 TraesCS5B01G462800 chr5B 86.765 68 9 0 2466 2533 638354676 638354609 3.230000e-10 76.8
9 TraesCS5B01G462800 chr5A 90.361 1359 77 20 644 1963 635409203 635407860 0.000000e+00 1735.0
10 TraesCS5B01G462800 chr5A 84.440 1356 143 43 760 2066 635411791 635410455 0.000000e+00 1273.0
11 TraesCS5B01G462800 chr5A 83.641 379 43 14 2060 2429 635407828 635407460 3.730000e-89 339.0
12 TraesCS5B01G462800 chr5D 91.523 1215 75 17 667 1856 507772765 507771554 0.000000e+00 1648.0
13 TraesCS5B01G462800 chr5D 88.201 1212 114 19 667 1852 507836303 507835095 0.000000e+00 1419.0
14 TraesCS5B01G462800 chr5D 87.230 1159 116 18 717 1856 507776117 507774972 0.000000e+00 1291.0
15 TraesCS5B01G462800 chr5D 91.581 487 35 4 109 591 3579724 3579240 0.000000e+00 667.0
16 TraesCS5B01G462800 chr5D 83.775 604 60 27 1867 2455 507771514 507770934 3.430000e-149 538.0
17 TraesCS5B01G462800 chr5D 92.481 266 18 2 2462 2725 507770882 507770617 2.200000e-101 379.0
18 TraesCS5B01G462800 chr5D 83.529 85 14 0 1879 1963 507774927 507774843 2.500000e-11 80.5
19 TraesCS5B01G462800 chr5D 97.059 34 1 0 1882 1915 507835051 507835018 1.170000e-04 58.4
20 TraesCS5B01G462800 chr6A 85.980 806 107 4 1051 1853 61411808 61412610 0.000000e+00 857.0
21 TraesCS5B01G462800 chr6A 90.123 486 42 4 111 591 500096943 500097427 7.110000e-176 627.0
22 TraesCS5B01G462800 chr6A 89.194 509 44 7 103 605 556287272 556286769 2.560000e-175 625.0
23 TraesCS5B01G462800 chr6B 85.856 806 108 4 1051 1853 117837133 117837935 0.000000e+00 852.0
24 TraesCS5B01G462800 chr6B 85.906 596 78 4 1 591 402707914 402707320 5.490000e-177 630.0
25 TraesCS5B01G462800 chr3B 90.290 587 44 9 14 591 732170984 732170402 0.000000e+00 756.0
26 TraesCS5B01G462800 chr1D 90.389 489 39 5 110 591 201772791 201772304 1.180000e-178 636.0
27 TraesCS5B01G462800 chr1D 89.655 58 3 3 591 645 12410436 12410493 1.500000e-08 71.3
28 TraesCS5B01G462800 chr3D 90.081 494 42 5 103 591 612825801 612826292 4.250000e-178 634.0
29 TraesCS5B01G462800 chrUn 94.118 51 0 3 597 645 162261836 162261787 1.160000e-09 75.0
30 TraesCS5B01G462800 chr7D 94.872 39 0 2 609 645 550885853 550885815 3.250000e-05 60.2
31 TraesCS5B01G462800 chr2D 90.476 42 2 2 606 645 20389902 20389861 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G462800 chr5B 638334967 638337986 3019 True 5578.000000 5578 100.000000 1 3020 1 chr5B.!!$R1 3019
1 TraesCS5B01G462800 chr5B 638343808 638346280 2472 True 1818.000000 3290 88.489000 1 2455 2 chr5B.!!$R4 2454
2 TraesCS5B01G462800 chr5B 638397020 638398233 1213 True 1384.000000 1384 87.592000 667 1856 1 chr5B.!!$R3 1189
3 TraesCS5B01G462800 chr5B 638362632 638364030 1398 True 1199.000000 1199 82.606000 958 2363 1 chr5B.!!$R2 1405
4 TraesCS5B01G462800 chr5B 685617073 685617666 593 False 806.000000 806 91.275000 1 591 1 chr5B.!!$F1 590
5 TraesCS5B01G462800 chr5B 638352089 638354676 2587 True 698.600000 1666 85.676333 649 2533 3 chr5B.!!$R5 1884
6 TraesCS5B01G462800 chr5A 635407460 635411791 4331 True 1115.666667 1735 86.147333 644 2429 3 chr5A.!!$R1 1785
7 TraesCS5B01G462800 chr5D 507770617 507776117 5500 True 787.300000 1648 87.707600 667 2725 5 chr5D.!!$R2 2058
8 TraesCS5B01G462800 chr5D 507835018 507836303 1285 True 738.700000 1419 92.630000 667 1915 2 chr5D.!!$R3 1248
9 TraesCS5B01G462800 chr6A 61411808 61412610 802 False 857.000000 857 85.980000 1051 1853 1 chr6A.!!$F1 802
10 TraesCS5B01G462800 chr6A 556286769 556287272 503 True 625.000000 625 89.194000 103 605 1 chr6A.!!$R1 502
11 TraesCS5B01G462800 chr6B 117837133 117837935 802 False 852.000000 852 85.856000 1051 1853 1 chr6B.!!$F1 802
12 TraesCS5B01G462800 chr6B 402707320 402707914 594 True 630.000000 630 85.906000 1 591 1 chr6B.!!$R1 590
13 TraesCS5B01G462800 chr3B 732170402 732170984 582 True 756.000000 756 90.290000 14 591 1 chr3B.!!$R1 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
255 260 0.179054 AGTCCGTCGATCATCCGAGA 60.179 55.000 0.0 0.0 39.43 4.04 F
648 658 1.799994 GCCGTAGCCGTCAAAAAGTAA 59.200 47.619 0.0 0.0 0.00 2.24 F
1860 4608 0.391263 CGGGCAAGTAAGGTGGAGTC 60.391 60.000 0.0 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1842 4561 0.690762 TGACTCCACCTTACTTGCCC 59.309 55.0 0.00 0.0 0.00 5.36 R
1981 4731 1.605753 TCGGATGATCGAATCCTCGT 58.394 50.0 13.07 0.0 45.62 4.18 R
2938 5752 0.028902 GGACACGTGGCACTTTGAAC 59.971 55.0 25.47 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
255 260 0.179054 AGTCCGTCGATCATCCGAGA 60.179 55.000 0.00 0.00 39.43 4.04
648 658 1.799994 GCCGTAGCCGTCAAAAAGTAA 59.200 47.619 0.00 0.00 0.00 2.24
649 659 2.417586 GCCGTAGCCGTCAAAAAGTAAT 59.582 45.455 0.00 0.00 0.00 1.89
651 661 4.093261 GCCGTAGCCGTCAAAAAGTAATAA 59.907 41.667 0.00 0.00 0.00 1.40
1768 4487 2.933287 TCACCGGCAAGGGTCCAT 60.933 61.111 0.00 0.00 46.96 3.41
1842 4561 0.457851 TTGCCACCAACTTTGTTCCG 59.542 50.000 0.00 0.00 0.00 4.30
1856 4575 0.958876 GTTCCGGGCAAGTAAGGTGG 60.959 60.000 0.00 0.00 0.00 4.61
1860 4608 0.391263 CGGGCAAGTAAGGTGGAGTC 60.391 60.000 0.00 0.00 0.00 3.36
1861 4609 0.690762 GGGCAAGTAAGGTGGAGTCA 59.309 55.000 0.00 0.00 0.00 3.41
1865 4613 2.037251 GCAAGTAAGGTGGAGTCAGTCA 59.963 50.000 0.00 0.00 0.00 3.41
1872 4620 1.543208 GGTGGAGTCAGTCATTGTGCA 60.543 52.381 0.00 0.00 0.00 4.57
1928 4676 5.181748 AGGATTCGATTGTCTGGAAAAGAG 58.818 41.667 0.00 0.00 34.84 2.85
1931 4681 4.600692 TCGATTGTCTGGAAAAGAGACA 57.399 40.909 0.00 0.00 46.41 3.41
1940 4690 6.000840 GTCTGGAAAAGAGACAAGGATTCTT 58.999 40.000 0.00 0.00 39.80 2.52
1957 4707 6.870439 AGGATTCTTTGCAAAAGCTTATGTTC 59.130 34.615 13.84 2.40 0.00 3.18
1963 4713 3.894427 TGCAAAAGCTTATGTTCTCCCAA 59.106 39.130 0.00 0.00 0.00 4.12
1964 4714 4.343526 TGCAAAAGCTTATGTTCTCCCAAA 59.656 37.500 0.00 0.00 0.00 3.28
1966 4716 6.210385 TGCAAAAGCTTATGTTCTCCCAAATA 59.790 34.615 0.00 0.00 0.00 1.40
1967 4717 6.753744 GCAAAAGCTTATGTTCTCCCAAATAG 59.246 38.462 0.00 0.00 0.00 1.73
1969 4719 5.717119 AGCTTATGTTCTCCCAAATAGGT 57.283 39.130 0.00 0.00 34.66 3.08
1971 4721 5.888161 AGCTTATGTTCTCCCAAATAGGTTG 59.112 40.000 0.00 0.00 36.94 3.77
1972 4722 5.885912 GCTTATGTTCTCCCAAATAGGTTGA 59.114 40.000 0.00 0.00 39.87 3.18
1973 4723 6.547510 GCTTATGTTCTCCCAAATAGGTTGAT 59.452 38.462 0.00 0.00 39.87 2.57
1974 4724 7.469181 GCTTATGTTCTCCCAAATAGGTTGATG 60.469 40.741 0.00 0.00 39.87 3.07
1976 4726 6.381498 TGTTCTCCCAAATAGGTTGATGTA 57.619 37.500 0.00 0.00 39.87 2.29
1977 4727 6.785076 TGTTCTCCCAAATAGGTTGATGTAA 58.215 36.000 0.00 0.00 39.87 2.41
1981 4731 9.983024 TTCTCCCAAATAGGTTGATGTAAATTA 57.017 29.630 0.00 0.00 39.87 1.40
1982 4732 9.403583 TCTCCCAAATAGGTTGATGTAAATTAC 57.596 33.333 0.00 0.00 39.87 1.89
1983 4733 8.215926 TCCCAAATAGGTTGATGTAAATTACG 57.784 34.615 0.00 0.00 39.87 3.18
1984 4734 8.047911 TCCCAAATAGGTTGATGTAAATTACGA 58.952 33.333 0.00 0.00 39.87 3.43
1986 4736 8.342634 CCAAATAGGTTGATGTAAATTACGAGG 58.657 37.037 0.00 0.00 39.87 4.63
1987 4737 9.104965 CAAATAGGTTGATGTAAATTACGAGGA 57.895 33.333 0.00 0.00 39.87 3.71
1988 4738 9.847224 AAATAGGTTGATGTAAATTACGAGGAT 57.153 29.630 0.00 0.00 0.00 3.24
1989 4739 9.847224 AATAGGTTGATGTAAATTACGAGGATT 57.153 29.630 0.00 0.00 0.00 3.01
1990 4740 7.787725 AGGTTGATGTAAATTACGAGGATTC 57.212 36.000 0.00 0.00 0.00 2.52
2026 4777 6.699204 ACAAATATGTTGTTGTTCGCATTTGA 59.301 30.769 9.86 0.00 35.91 2.69
2118 4871 1.807886 CAGGCCTGCATTGAGAAGC 59.192 57.895 22.33 0.00 0.00 3.86
2147 4900 0.950836 TTGATGGTTGAGGCGTTGTG 59.049 50.000 0.00 0.00 0.00 3.33
2215 4971 6.502136 ACTTTACTGCCTAAAAGCAAGATC 57.498 37.500 0.00 0.00 43.52 2.75
2248 5005 1.913778 TGCATGCTTCACAGGAATGT 58.086 45.000 20.33 0.00 31.34 2.71
2252 5009 3.881688 GCATGCTTCACAGGAATGTATCT 59.118 43.478 11.37 0.00 31.34 1.98
2307 5064 8.710835 TTTTAATGGTTTTGAAAACAGAGGAC 57.289 30.769 20.87 4.63 39.27 3.85
2308 5065 7.654022 TTAATGGTTTTGAAAACAGAGGACT 57.346 32.000 20.87 2.54 39.27 3.85
2312 5069 5.299279 TGGTTTTGAAAACAGAGGACTCATC 59.701 40.000 20.87 1.56 30.84 2.92
2315 5077 7.428826 GTTTTGAAAACAGAGGACTCATCATT 58.571 34.615 15.34 0.00 0.00 2.57
2328 5090 5.008415 GGACTCATCATTTAGCAATGTGGAG 59.992 44.000 13.56 13.56 41.85 3.86
2370 5133 7.978975 TGAAAACCAAACATTTAGAAACAGAGG 59.021 33.333 0.00 0.00 0.00 3.69
2374 5137 6.486993 ACCAAACATTTAGAAACAGAGGACTC 59.513 38.462 0.00 0.00 0.00 3.36
2375 5138 6.486657 CCAAACATTTAGAAACAGAGGACTCA 59.513 38.462 1.75 0.00 0.00 3.41
2376 5139 7.175641 CCAAACATTTAGAAACAGAGGACTCAT 59.824 37.037 1.75 0.00 0.00 2.90
2377 5140 7.913674 AACATTTAGAAACAGAGGACTCATC 57.086 36.000 1.75 0.00 0.00 2.92
2378 5141 7.009179 ACATTTAGAAACAGAGGACTCATCA 57.991 36.000 1.75 0.00 0.00 3.07
2379 5142 7.628234 ACATTTAGAAACAGAGGACTCATCAT 58.372 34.615 1.75 0.00 0.00 2.45
2380 5143 7.551974 ACATTTAGAAACAGAGGACTCATCATG 59.448 37.037 1.75 0.00 0.00 3.07
2446 5213 6.438763 AGCTGAATGTAAAAACAGTTAGTGC 58.561 36.000 0.00 0.00 33.57 4.40
2455 5222 8.191446 TGTAAAAACAGTTAGTGCAGCAATAAA 58.809 29.630 16.58 0.00 0.00 1.40
2456 5223 7.698836 AAAAACAGTTAGTGCAGCAATAAAG 57.301 32.000 16.58 14.12 0.00 1.85
2457 5224 6.391227 AAACAGTTAGTGCAGCAATAAAGT 57.609 33.333 16.58 14.70 0.00 2.66
2458 5225 7.504924 AAACAGTTAGTGCAGCAATAAAGTA 57.495 32.000 16.58 0.00 0.00 2.24
2460 5227 5.411669 ACAGTTAGTGCAGCAATAAAGTACC 59.588 40.000 16.58 4.66 0.00 3.34
2473 5285 7.341769 AGCAATAAAGTACCAGATGGCATTTAA 59.658 33.333 0.00 0.00 39.32 1.52
2481 5293 2.032550 CAGATGGCATTTAACTGAGCGG 59.967 50.000 0.00 0.00 0.00 5.52
2510 5322 3.733443 GGCTTTGCCTTTCTCTTTCAA 57.267 42.857 0.73 0.00 46.69 2.69
2511 5323 3.646946 GGCTTTGCCTTTCTCTTTCAAG 58.353 45.455 0.73 0.00 46.69 3.02
2541 5353 9.074576 AGAAACCCAACTATTCGAATAAAGTTT 57.925 29.630 19.14 19.42 0.00 2.66
2544 5356 7.813645 ACCCAACTATTCGAATAAAGTTTCAC 58.186 34.615 19.14 0.00 0.00 3.18
2564 5376 4.932200 TCACACGATTTTTGGCTTGTTTTT 59.068 33.333 0.00 0.00 0.00 1.94
2570 5382 5.390356 CGATTTTTGGCTTGTTTTTGTGTGT 60.390 36.000 0.00 0.00 0.00 3.72
2664 5478 1.676014 CCACCTTACCAAGAAGAGGCG 60.676 57.143 0.00 0.00 32.42 5.52
2673 5487 0.961753 AAGAAGAGGCGGCCTTTTTG 59.038 50.000 24.71 0.00 31.76 2.44
2677 5491 0.322546 AGAGGCGGCCTTTTTGGTAG 60.323 55.000 24.71 0.00 38.35 3.18
2683 5497 3.538591 GCGGCCTTTTTGGTAGTAGTAT 58.461 45.455 0.00 0.00 38.35 2.12
2717 5531 1.174712 GCCTTGCCAAGAAGACTGCA 61.175 55.000 5.89 0.00 0.00 4.41
2718 5532 1.542492 CCTTGCCAAGAAGACTGCAT 58.458 50.000 5.89 0.00 33.08 3.96
2725 5539 3.493176 GCCAAGAAGACTGCATTTTTGGT 60.493 43.478 17.43 0.00 36.76 3.67
2726 5540 4.261994 GCCAAGAAGACTGCATTTTTGGTA 60.262 41.667 17.43 0.00 36.76 3.25
2727 5541 5.738783 GCCAAGAAGACTGCATTTTTGGTAA 60.739 40.000 17.43 0.00 36.76 2.85
2728 5542 6.458210 CCAAGAAGACTGCATTTTTGGTAAT 58.542 36.000 11.04 0.00 31.33 1.89
2729 5543 6.366877 CCAAGAAGACTGCATTTTTGGTAATG 59.633 38.462 11.04 0.00 38.31 1.90
2730 5544 6.029346 AGAAGACTGCATTTTTGGTAATGG 57.971 37.500 0.00 0.00 36.30 3.16
2731 5545 5.539955 AGAAGACTGCATTTTTGGTAATGGT 59.460 36.000 0.00 0.00 36.30 3.55
2732 5546 6.719370 AGAAGACTGCATTTTTGGTAATGGTA 59.281 34.615 0.00 0.00 36.30 3.25
2733 5547 6.267496 AGACTGCATTTTTGGTAATGGTAC 57.733 37.500 0.00 0.00 36.30 3.34
2734 5548 6.010219 AGACTGCATTTTTGGTAATGGTACT 58.990 36.000 0.00 0.00 36.30 2.73
2735 5549 6.493458 AGACTGCATTTTTGGTAATGGTACTT 59.507 34.615 0.00 0.00 36.30 2.24
2736 5550 7.668052 AGACTGCATTTTTGGTAATGGTACTTA 59.332 33.333 0.00 0.00 36.30 2.24
2737 5551 8.361169 ACTGCATTTTTGGTAATGGTACTTAT 57.639 30.769 0.00 0.00 36.30 1.73
2738 5552 8.811994 ACTGCATTTTTGGTAATGGTACTTATT 58.188 29.630 0.00 0.00 36.30 1.40
2739 5553 9.651913 CTGCATTTTTGGTAATGGTACTTATTT 57.348 29.630 0.00 0.00 36.30 1.40
2743 5557 9.863845 ATTTTTGGTAATGGTACTTATTTTCCG 57.136 29.630 0.00 0.00 0.00 4.30
2744 5558 7.999450 TTTGGTAATGGTACTTATTTTCCGT 57.001 32.000 0.00 0.00 0.00 4.69
2745 5559 7.999450 TTGGTAATGGTACTTATTTTCCGTT 57.001 32.000 0.00 0.00 34.24 4.44
2746 5560 7.614124 TGGTAATGGTACTTATTTTCCGTTC 57.386 36.000 0.00 0.00 32.43 3.95
2747 5561 7.166851 TGGTAATGGTACTTATTTTCCGTTCA 58.833 34.615 0.00 0.00 32.43 3.18
2748 5562 7.664731 TGGTAATGGTACTTATTTTCCGTTCAA 59.335 33.333 0.00 0.00 32.43 2.69
2749 5563 7.964559 GGTAATGGTACTTATTTTCCGTTCAAC 59.035 37.037 0.00 0.00 32.43 3.18
2750 5564 7.754851 AATGGTACTTATTTTCCGTTCAACT 57.245 32.000 0.00 0.00 0.00 3.16
2751 5565 7.754851 ATGGTACTTATTTTCCGTTCAACTT 57.245 32.000 0.00 0.00 0.00 2.66
2752 5566 7.571080 TGGTACTTATTTTCCGTTCAACTTT 57.429 32.000 0.00 0.00 0.00 2.66
2753 5567 7.998580 TGGTACTTATTTTCCGTTCAACTTTT 58.001 30.769 0.00 0.00 0.00 2.27
2754 5568 9.118300 TGGTACTTATTTTCCGTTCAACTTTTA 57.882 29.630 0.00 0.00 0.00 1.52
2763 5577 9.768662 TTTTCCGTTCAACTTTTATCTAGTACT 57.231 29.630 0.00 0.00 0.00 2.73
2766 5580 9.453572 TCCGTTCAACTTTTATCTAGTACTAGA 57.546 33.333 29.96 29.96 45.24 2.43
2780 5594 8.282455 TCTAGTACTAGATGAACCAGAAACTG 57.718 38.462 25.58 0.00 37.28 3.16
2781 5595 5.725362 AGTACTAGATGAACCAGAAACTGC 58.275 41.667 0.00 0.00 0.00 4.40
2782 5596 4.899352 ACTAGATGAACCAGAAACTGCT 57.101 40.909 0.00 0.00 0.00 4.24
2783 5597 6.663953 AGTACTAGATGAACCAGAAACTGCTA 59.336 38.462 0.00 0.00 0.00 3.49
2784 5598 6.360370 ACTAGATGAACCAGAAACTGCTAA 57.640 37.500 0.00 0.00 0.00 3.09
2785 5599 6.402222 ACTAGATGAACCAGAAACTGCTAAG 58.598 40.000 0.00 0.00 0.00 2.18
2786 5600 4.583871 AGATGAACCAGAAACTGCTAAGG 58.416 43.478 0.00 0.00 0.00 2.69
2787 5601 2.504367 TGAACCAGAAACTGCTAAGGC 58.496 47.619 0.00 0.00 39.26 4.35
2802 5616 5.311265 TGCTAAGGCAGATGATGAATTAGG 58.689 41.667 0.00 0.00 44.28 2.69
2803 5617 5.163163 TGCTAAGGCAGATGATGAATTAGGT 60.163 40.000 0.00 0.00 44.28 3.08
2804 5618 5.767168 GCTAAGGCAGATGATGAATTAGGTT 59.233 40.000 0.00 0.00 38.54 3.50
2805 5619 6.072783 GCTAAGGCAGATGATGAATTAGGTTC 60.073 42.308 0.00 0.00 38.54 3.62
2806 5620 4.723309 AGGCAGATGATGAATTAGGTTCC 58.277 43.478 0.00 0.00 35.91 3.62
2807 5621 3.823304 GGCAGATGATGAATTAGGTTCCC 59.177 47.826 0.00 0.00 35.91 3.97
2808 5622 4.446889 GGCAGATGATGAATTAGGTTCCCT 60.447 45.833 0.00 0.00 35.91 4.20
2809 5623 5.136105 GCAGATGATGAATTAGGTTCCCTT 58.864 41.667 0.00 0.00 35.91 3.95
2810 5624 5.595952 GCAGATGATGAATTAGGTTCCCTTT 59.404 40.000 0.00 0.00 35.91 3.11
2811 5625 6.097412 GCAGATGATGAATTAGGTTCCCTTTT 59.903 38.462 0.00 0.00 35.91 2.27
2812 5626 7.364144 GCAGATGATGAATTAGGTTCCCTTTTT 60.364 37.037 0.00 0.00 35.91 1.94
2813 5627 8.193438 CAGATGATGAATTAGGTTCCCTTTTTC 58.807 37.037 0.00 0.00 35.91 2.29
2814 5628 7.895429 AGATGATGAATTAGGTTCCCTTTTTCA 59.105 33.333 8.91 8.91 37.54 2.69
2815 5629 7.466746 TGATGAATTAGGTTCCCTTTTTCAG 57.533 36.000 11.06 0.00 37.02 3.02
2816 5630 7.237982 TGATGAATTAGGTTCCCTTTTTCAGA 58.762 34.615 11.06 2.17 37.02 3.27
2817 5631 7.895429 TGATGAATTAGGTTCCCTTTTTCAGAT 59.105 33.333 11.06 0.36 37.02 2.90
2818 5632 9.408648 GATGAATTAGGTTCCCTTTTTCAGATA 57.591 33.333 11.06 0.00 37.02 1.98
2819 5633 9.942526 ATGAATTAGGTTCCCTTTTTCAGATAT 57.057 29.630 11.06 0.00 37.02 1.63
2820 5634 9.768215 TGAATTAGGTTCCCTTTTTCAGATATT 57.232 29.630 0.00 0.00 35.91 1.28
2826 5640 9.601810 AGGTTCCCTTTTTCAGATATTAACTTT 57.398 29.630 0.00 0.00 0.00 2.66
2855 5669 8.561738 GAGGTTTCCTCTGTTATGAAACATAA 57.438 34.615 14.15 0.00 46.41 1.90
2856 5670 8.336801 AGGTTTCCTCTGTTATGAAACATAAC 57.663 34.615 20.66 20.66 46.01 1.89
2857 5671 8.164070 AGGTTTCCTCTGTTATGAAACATAACT 58.836 33.333 24.79 7.55 46.01 2.24
2858 5672 8.451748 GGTTTCCTCTGTTATGAAACATAACTC 58.548 37.037 24.79 9.36 46.01 3.01
2859 5673 7.827819 TTCCTCTGTTATGAAACATAACTCG 57.172 36.000 24.79 18.58 44.43 4.18
2860 5674 7.165460 TCCTCTGTTATGAAACATAACTCGA 57.835 36.000 24.79 20.54 44.43 4.04
2861 5675 7.782049 TCCTCTGTTATGAAACATAACTCGAT 58.218 34.615 24.79 0.00 44.43 3.59
2862 5676 8.258007 TCCTCTGTTATGAAACATAACTCGATT 58.742 33.333 24.79 0.00 44.43 3.34
2863 5677 8.543774 CCTCTGTTATGAAACATAACTCGATTC 58.456 37.037 24.79 7.29 44.43 2.52
2864 5678 8.115491 TCTGTTATGAAACATAACTCGATTCG 57.885 34.615 24.79 0.00 44.43 3.34
2865 5679 6.701937 TGTTATGAAACATAACTCGATTCGC 58.298 36.000 24.79 6.27 40.69 4.70
2866 5680 6.311690 TGTTATGAAACATAACTCGATTCGCA 59.688 34.615 24.79 8.11 40.69 5.10
2867 5681 4.577687 TGAAACATAACTCGATTCGCAC 57.422 40.909 0.00 0.00 0.00 5.34
2868 5682 4.242475 TGAAACATAACTCGATTCGCACT 58.758 39.130 0.00 0.00 0.00 4.40
2869 5683 4.326278 TGAAACATAACTCGATTCGCACTC 59.674 41.667 0.00 0.00 0.00 3.51
2870 5684 3.784701 ACATAACTCGATTCGCACTCT 57.215 42.857 0.00 0.00 0.00 3.24
2871 5685 4.895224 ACATAACTCGATTCGCACTCTA 57.105 40.909 0.00 0.00 0.00 2.43
2872 5686 4.599047 ACATAACTCGATTCGCACTCTAC 58.401 43.478 0.00 0.00 0.00 2.59
2873 5687 4.335874 ACATAACTCGATTCGCACTCTACT 59.664 41.667 0.00 0.00 0.00 2.57
2874 5688 3.408288 AACTCGATTCGCACTCTACTC 57.592 47.619 0.00 0.00 0.00 2.59
2875 5689 2.357075 ACTCGATTCGCACTCTACTCA 58.643 47.619 0.00 0.00 0.00 3.41
2876 5690 2.747989 ACTCGATTCGCACTCTACTCAA 59.252 45.455 0.00 0.00 0.00 3.02
2877 5691 3.378742 ACTCGATTCGCACTCTACTCAAT 59.621 43.478 0.00 0.00 0.00 2.57
2878 5692 3.695816 TCGATTCGCACTCTACTCAATG 58.304 45.455 0.00 0.00 0.00 2.82
2879 5693 3.128764 TCGATTCGCACTCTACTCAATGT 59.871 43.478 0.00 0.00 0.00 2.71
2880 5694 4.334481 TCGATTCGCACTCTACTCAATGTA 59.666 41.667 0.00 0.00 0.00 2.29
2882 5696 4.371855 TTCGCACTCTACTCAATGTAGG 57.628 45.455 3.44 0.00 46.45 3.18
2883 5697 3.353557 TCGCACTCTACTCAATGTAGGT 58.646 45.455 3.44 0.00 46.45 3.08
2884 5698 3.128764 TCGCACTCTACTCAATGTAGGTG 59.871 47.826 14.30 14.30 46.45 4.00
2886 5700 4.727507 CACTCTACTCAATGTAGGTGCT 57.272 45.455 3.44 0.00 46.45 4.40
2887 5701 5.836821 CACTCTACTCAATGTAGGTGCTA 57.163 43.478 3.44 0.00 46.45 3.49
2888 5702 5.583495 CACTCTACTCAATGTAGGTGCTAC 58.417 45.833 3.44 0.00 46.45 3.58
2889 5703 4.645588 ACTCTACTCAATGTAGGTGCTACC 59.354 45.833 3.44 0.00 46.45 3.18
2898 5712 3.807368 GGTGCTACCTCAGTGGGT 58.193 61.111 8.18 8.18 42.86 4.51
2899 5713 1.597461 GGTGCTACCTCAGTGGGTC 59.403 63.158 6.57 0.00 40.48 4.46
2900 5714 1.597461 GTGCTACCTCAGTGGGTCC 59.403 63.158 6.57 1.85 40.48 4.46
2901 5715 1.157513 TGCTACCTCAGTGGGTCCA 59.842 57.895 6.57 4.03 40.48 4.02
2902 5716 0.472925 TGCTACCTCAGTGGGTCCAA 60.473 55.000 6.57 0.00 40.48 3.53
2903 5717 0.690762 GCTACCTCAGTGGGTCCAAA 59.309 55.000 6.57 0.00 40.48 3.28
2904 5718 1.339151 GCTACCTCAGTGGGTCCAAAG 60.339 57.143 6.57 1.49 40.48 2.77
2905 5719 0.690762 TACCTCAGTGGGTCCAAAGC 59.309 55.000 6.57 0.00 40.48 3.51
2906 5720 1.352622 ACCTCAGTGGGTCCAAAGCA 61.353 55.000 0.00 0.00 41.11 3.91
2907 5721 0.038744 CCTCAGTGGGTCCAAAGCAT 59.961 55.000 0.00 0.00 0.00 3.79
2908 5722 1.281867 CCTCAGTGGGTCCAAAGCATA 59.718 52.381 0.00 0.00 0.00 3.14
2909 5723 2.092212 CCTCAGTGGGTCCAAAGCATAT 60.092 50.000 0.00 0.00 0.00 1.78
2910 5724 2.947652 CTCAGTGGGTCCAAAGCATATG 59.052 50.000 0.00 0.00 0.00 1.78
2911 5725 2.575735 TCAGTGGGTCCAAAGCATATGA 59.424 45.455 6.97 0.00 0.00 2.15
2912 5726 2.684881 CAGTGGGTCCAAAGCATATGAC 59.315 50.000 6.97 0.00 0.00 3.06
2913 5727 2.308570 AGTGGGTCCAAAGCATATGACA 59.691 45.455 6.97 0.00 0.00 3.58
2914 5728 3.088532 GTGGGTCCAAAGCATATGACAA 58.911 45.455 6.97 0.00 0.00 3.18
2915 5729 3.509575 GTGGGTCCAAAGCATATGACAAA 59.490 43.478 6.97 0.00 0.00 2.83
2916 5730 3.763360 TGGGTCCAAAGCATATGACAAAG 59.237 43.478 6.97 0.00 0.00 2.77
2917 5731 4.016444 GGGTCCAAAGCATATGACAAAGA 58.984 43.478 6.97 0.00 0.00 2.52
2918 5732 4.142381 GGGTCCAAAGCATATGACAAAGAC 60.142 45.833 6.97 6.95 0.00 3.01
2919 5733 4.458989 GGTCCAAAGCATATGACAAAGACA 59.541 41.667 6.97 0.00 0.00 3.41
2920 5734 5.392380 GGTCCAAAGCATATGACAAAGACAG 60.392 44.000 6.97 0.00 0.00 3.51
2921 5735 4.156556 TCCAAAGCATATGACAAAGACAGC 59.843 41.667 6.97 0.00 0.00 4.40
2922 5736 4.157289 CCAAAGCATATGACAAAGACAGCT 59.843 41.667 6.97 0.00 0.00 4.24
2923 5737 5.330295 CAAAGCATATGACAAAGACAGCTC 58.670 41.667 6.97 0.00 0.00 4.09
2924 5738 3.193263 AGCATATGACAAAGACAGCTCG 58.807 45.455 6.97 0.00 0.00 5.03
2925 5739 2.286067 GCATATGACAAAGACAGCTCGC 60.286 50.000 6.97 0.00 0.00 5.03
2926 5740 2.010145 TATGACAAAGACAGCTCGCC 57.990 50.000 0.00 0.00 0.00 5.54
2927 5741 1.016130 ATGACAAAGACAGCTCGCCG 61.016 55.000 0.00 0.00 0.00 6.46
2928 5742 1.664965 GACAAAGACAGCTCGCCGT 60.665 57.895 0.00 0.00 0.00 5.68
2929 5743 1.222115 GACAAAGACAGCTCGCCGTT 61.222 55.000 0.00 0.00 0.00 4.44
2930 5744 0.814010 ACAAAGACAGCTCGCCGTTT 60.814 50.000 0.00 0.00 0.00 3.60
2931 5745 0.110644 CAAAGACAGCTCGCCGTTTC 60.111 55.000 0.00 0.00 0.00 2.78
2932 5746 0.531974 AAAGACAGCTCGCCGTTTCA 60.532 50.000 0.00 0.00 0.00 2.69
2933 5747 0.946221 AAGACAGCTCGCCGTTTCAG 60.946 55.000 0.00 0.00 0.00 3.02
2934 5748 1.664965 GACAGCTCGCCGTTTCAGT 60.665 57.895 0.00 0.00 0.00 3.41
2935 5749 1.222115 GACAGCTCGCCGTTTCAGTT 61.222 55.000 0.00 0.00 0.00 3.16
2936 5750 1.222115 ACAGCTCGCCGTTTCAGTTC 61.222 55.000 0.00 0.00 0.00 3.01
2937 5751 1.668151 AGCTCGCCGTTTCAGTTCC 60.668 57.895 0.00 0.00 0.00 3.62
2938 5752 3.011760 GCTCGCCGTTTCAGTTCCG 62.012 63.158 0.00 0.00 0.00 4.30
2939 5753 1.663702 CTCGCCGTTTCAGTTCCGT 60.664 57.895 0.00 0.00 0.00 4.69
2940 5754 1.219522 CTCGCCGTTTCAGTTCCGTT 61.220 55.000 0.00 0.00 0.00 4.44
2941 5755 1.203313 CGCCGTTTCAGTTCCGTTC 59.797 57.895 0.00 0.00 0.00 3.95
2942 5756 1.492319 CGCCGTTTCAGTTCCGTTCA 61.492 55.000 0.00 0.00 0.00 3.18
2943 5757 0.658897 GCCGTTTCAGTTCCGTTCAA 59.341 50.000 0.00 0.00 0.00 2.69
2944 5758 1.064357 GCCGTTTCAGTTCCGTTCAAA 59.936 47.619 0.00 0.00 0.00 2.69
2945 5759 2.853281 GCCGTTTCAGTTCCGTTCAAAG 60.853 50.000 0.00 0.00 0.00 2.77
2946 5760 2.353579 CCGTTTCAGTTCCGTTCAAAGT 59.646 45.455 0.00 0.00 0.00 2.66
2947 5761 3.350912 CGTTTCAGTTCCGTTCAAAGTG 58.649 45.455 0.00 0.00 0.00 3.16
2948 5762 3.105937 GTTTCAGTTCCGTTCAAAGTGC 58.894 45.455 0.00 0.00 0.00 4.40
2949 5763 1.305201 TCAGTTCCGTTCAAAGTGCC 58.695 50.000 0.00 0.00 0.00 5.01
2950 5764 1.021202 CAGTTCCGTTCAAAGTGCCA 58.979 50.000 0.00 0.00 0.00 4.92
2951 5765 1.021968 AGTTCCGTTCAAAGTGCCAC 58.978 50.000 0.00 0.00 0.00 5.01
2952 5766 0.316689 GTTCCGTTCAAAGTGCCACG 60.317 55.000 0.00 0.00 0.00 4.94
2953 5767 0.745128 TTCCGTTCAAAGTGCCACGT 60.745 50.000 0.00 0.00 0.00 4.49
2954 5768 1.010125 CCGTTCAAAGTGCCACGTG 60.010 57.895 9.08 9.08 0.00 4.49
2955 5769 1.711060 CCGTTCAAAGTGCCACGTGT 61.711 55.000 15.65 0.00 0.00 4.49
2956 5770 0.315869 CGTTCAAAGTGCCACGTGTC 60.316 55.000 15.65 0.98 0.00 3.67
2957 5771 0.028902 GTTCAAAGTGCCACGTGTCC 59.971 55.000 15.65 5.64 0.00 4.02
2958 5772 0.107410 TTCAAAGTGCCACGTGTCCT 60.107 50.000 15.65 3.89 0.00 3.85
2959 5773 0.531974 TCAAAGTGCCACGTGTCCTC 60.532 55.000 15.65 6.14 0.00 3.71
2960 5774 1.594293 AAAGTGCCACGTGTCCTCG 60.594 57.895 15.65 0.00 0.00 4.63
2961 5775 4.664677 AGTGCCACGTGTCCTCGC 62.665 66.667 15.65 10.75 0.00 5.03
2964 5778 3.755628 GCCACGTGTCCTCGCCTA 61.756 66.667 15.65 0.00 0.00 3.93
2965 5779 3.077519 GCCACGTGTCCTCGCCTAT 62.078 63.158 15.65 0.00 0.00 2.57
2966 5780 1.226974 CCACGTGTCCTCGCCTATG 60.227 63.158 15.65 0.00 0.00 2.23
2967 5781 1.878522 CACGTGTCCTCGCCTATGC 60.879 63.158 7.58 0.00 0.00 3.14
2968 5782 2.279517 CGTGTCCTCGCCTATGCC 60.280 66.667 0.00 0.00 0.00 4.40
2969 5783 2.279517 GTGTCCTCGCCTATGCCG 60.280 66.667 0.00 0.00 0.00 5.69
2970 5784 2.758327 TGTCCTCGCCTATGCCGT 60.758 61.111 0.00 0.00 0.00 5.68
2971 5785 2.027751 GTCCTCGCCTATGCCGTC 59.972 66.667 0.00 0.00 0.00 4.79
2972 5786 2.441348 TCCTCGCCTATGCCGTCA 60.441 61.111 0.00 0.00 0.00 4.35
2973 5787 2.028190 CCTCGCCTATGCCGTCAG 59.972 66.667 0.00 0.00 0.00 3.51
2974 5788 2.028190 CTCGCCTATGCCGTCAGG 59.972 66.667 0.00 0.00 41.62 3.86
2975 5789 3.506059 CTCGCCTATGCCGTCAGGG 62.506 68.421 0.00 0.00 38.20 4.45
2976 5790 3.536917 CGCCTATGCCGTCAGGGA 61.537 66.667 0.00 0.00 43.89 4.20
2983 5797 3.248043 TGCCGTCAGGGATTCTTTG 57.752 52.632 0.00 0.00 38.47 2.77
2984 5798 0.400213 TGCCGTCAGGGATTCTTTGT 59.600 50.000 0.00 0.00 38.47 2.83
2985 5799 1.087501 GCCGTCAGGGATTCTTTGTC 58.912 55.000 0.00 0.00 38.47 3.18
2986 5800 1.359848 CCGTCAGGGATTCTTTGTCG 58.640 55.000 0.00 0.00 38.47 4.35
2987 5801 1.337823 CCGTCAGGGATTCTTTGTCGT 60.338 52.381 0.00 0.00 38.47 4.34
2988 5802 1.993370 CGTCAGGGATTCTTTGTCGTC 59.007 52.381 0.00 0.00 0.00 4.20
2989 5803 2.609491 CGTCAGGGATTCTTTGTCGTCA 60.609 50.000 0.00 0.00 0.00 4.35
2990 5804 2.996621 GTCAGGGATTCTTTGTCGTCAG 59.003 50.000 0.00 0.00 0.00 3.51
2991 5805 1.734465 CAGGGATTCTTTGTCGTCAGC 59.266 52.381 0.00 0.00 0.00 4.26
2992 5806 1.087501 GGGATTCTTTGTCGTCAGCC 58.912 55.000 0.00 0.00 0.00 4.85
2993 5807 1.339151 GGGATTCTTTGTCGTCAGCCT 60.339 52.381 0.00 0.00 0.00 4.58
2994 5808 2.093658 GGGATTCTTTGTCGTCAGCCTA 60.094 50.000 0.00 0.00 0.00 3.93
2995 5809 3.432326 GGGATTCTTTGTCGTCAGCCTAT 60.432 47.826 0.00 0.00 0.00 2.57
2996 5810 3.557595 GGATTCTTTGTCGTCAGCCTATG 59.442 47.826 0.00 0.00 0.00 2.23
2997 5811 3.678056 TTCTTTGTCGTCAGCCTATGT 57.322 42.857 0.00 0.00 0.00 2.29
2998 5812 3.232213 TCTTTGTCGTCAGCCTATGTC 57.768 47.619 0.00 0.00 0.00 3.06
2999 5813 2.826128 TCTTTGTCGTCAGCCTATGTCT 59.174 45.455 0.00 0.00 0.00 3.41
3000 5814 2.941453 TTGTCGTCAGCCTATGTCTC 57.059 50.000 0.00 0.00 0.00 3.36
3001 5815 2.130272 TGTCGTCAGCCTATGTCTCT 57.870 50.000 0.00 0.00 0.00 3.10
3002 5816 2.017782 TGTCGTCAGCCTATGTCTCTC 58.982 52.381 0.00 0.00 0.00 3.20
3003 5817 2.294074 GTCGTCAGCCTATGTCTCTCT 58.706 52.381 0.00 0.00 0.00 3.10
3004 5818 2.685897 GTCGTCAGCCTATGTCTCTCTT 59.314 50.000 0.00 0.00 0.00 2.85
3005 5819 3.129638 GTCGTCAGCCTATGTCTCTCTTT 59.870 47.826 0.00 0.00 0.00 2.52
3006 5820 3.129462 TCGTCAGCCTATGTCTCTCTTTG 59.871 47.826 0.00 0.00 0.00 2.77
3007 5821 3.194062 GTCAGCCTATGTCTCTCTTTGC 58.806 50.000 0.00 0.00 0.00 3.68
3008 5822 2.169352 TCAGCCTATGTCTCTCTTTGCC 59.831 50.000 0.00 0.00 0.00 4.52
3009 5823 1.137872 AGCCTATGTCTCTCTTTGCCG 59.862 52.381 0.00 0.00 0.00 5.69
3010 5824 1.137086 GCCTATGTCTCTCTTTGCCGA 59.863 52.381 0.00 0.00 0.00 5.54
3011 5825 2.224161 GCCTATGTCTCTCTTTGCCGAT 60.224 50.000 0.00 0.00 0.00 4.18
3012 5826 3.005897 GCCTATGTCTCTCTTTGCCGATA 59.994 47.826 0.00 0.00 0.00 2.92
3013 5827 4.804108 CCTATGTCTCTCTTTGCCGATAG 58.196 47.826 0.00 0.00 0.00 2.08
3014 5828 4.279671 CCTATGTCTCTCTTTGCCGATAGT 59.720 45.833 0.00 0.00 0.00 2.12
3015 5829 3.510388 TGTCTCTCTTTGCCGATAGTG 57.490 47.619 0.00 0.00 0.00 2.74
3016 5830 2.166459 TGTCTCTCTTTGCCGATAGTGG 59.834 50.000 0.00 0.00 0.00 4.00
3017 5831 2.166664 GTCTCTCTTTGCCGATAGTGGT 59.833 50.000 0.00 0.00 0.00 4.16
3018 5832 2.832129 TCTCTCTTTGCCGATAGTGGTT 59.168 45.455 0.00 0.00 0.00 3.67
3019 5833 3.119101 TCTCTCTTTGCCGATAGTGGTTC 60.119 47.826 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
255 260 0.593128 GCTCGTGTGATTGCTTGGTT 59.407 50.000 0.00 0.00 0.00 3.67
1626 4345 1.896660 GAGCGGGTCAAAACTGCCA 60.897 57.895 1.64 0.00 0.00 4.92
1768 4487 1.544691 GTGGTCAGCGAGGTTCTCTAA 59.455 52.381 0.00 0.00 0.00 2.10
1842 4561 0.690762 TGACTCCACCTTACTTGCCC 59.309 55.000 0.00 0.00 0.00 5.36
1856 4575 2.072298 GGACTGCACAATGACTGACTC 58.928 52.381 0.00 0.00 0.00 3.36
1860 4608 2.224606 ACTTGGACTGCACAATGACTG 58.775 47.619 0.00 0.00 0.00 3.51
1861 4609 2.620115 CAACTTGGACTGCACAATGACT 59.380 45.455 0.00 0.00 0.00 3.41
1865 4613 3.820557 AGTACAACTTGGACTGCACAAT 58.179 40.909 5.80 0.00 40.76 2.71
1872 4620 5.248477 ACATCATGGTAGTACAACTTGGACT 59.752 40.000 11.53 11.53 45.18 3.85
1928 4676 4.979564 GCTTTTGCAAAGAATCCTTGTC 57.020 40.909 12.41 0.00 46.58 3.18
1957 4707 8.342634 CGTAATTTACATCAACCTATTTGGGAG 58.657 37.037 7.31 0.00 41.11 4.30
1963 4713 9.847224 AATCCTCGTAATTTACATCAACCTATT 57.153 29.630 7.31 0.00 0.00 1.73
1964 4714 9.490379 GAATCCTCGTAATTTACATCAACCTAT 57.510 33.333 7.31 0.00 0.00 2.57
1966 4716 6.479001 CGAATCCTCGTAATTTACATCAACCT 59.521 38.462 7.31 0.00 40.33 3.50
1967 4717 6.477688 TCGAATCCTCGTAATTTACATCAACC 59.522 38.462 7.31 0.00 45.62 3.77
1969 4719 7.923878 TGATCGAATCCTCGTAATTTACATCAA 59.076 33.333 7.31 0.00 45.62 2.57
1971 4721 7.869016 TGATCGAATCCTCGTAATTTACATC 57.131 36.000 7.31 0.54 45.62 3.06
1972 4722 7.545965 GGATGATCGAATCCTCGTAATTTACAT 59.454 37.037 8.62 0.00 45.62 2.29
1973 4723 6.866770 GGATGATCGAATCCTCGTAATTTACA 59.133 38.462 8.62 0.00 45.62 2.41
1974 4724 6.033619 CGGATGATCGAATCCTCGTAATTTAC 59.966 42.308 13.07 0.00 45.62 2.01
1976 4726 4.923871 CGGATGATCGAATCCTCGTAATTT 59.076 41.667 13.07 0.00 45.62 1.82
1977 4727 4.217767 TCGGATGATCGAATCCTCGTAATT 59.782 41.667 13.07 0.00 45.62 1.40
1981 4731 1.605753 TCGGATGATCGAATCCTCGT 58.394 50.000 13.07 0.00 45.62 4.18
1982 4732 2.706555 TTCGGATGATCGAATCCTCG 57.293 50.000 13.07 4.87 43.53 4.63
1988 4738 6.315144 ACAACATATTTGTTCGGATGATCGAA 59.685 34.615 0.00 0.00 44.24 3.71
1989 4739 5.815222 ACAACATATTTGTTCGGATGATCGA 59.185 36.000 0.00 0.00 44.24 3.59
1990 4740 6.048073 ACAACATATTTGTTCGGATGATCG 57.952 37.500 0.00 0.00 44.24 3.69
2013 4764 5.188327 TGGTGTTAATCAAATGCGAACAA 57.812 34.783 0.00 0.00 32.20 2.83
2014 4765 4.837896 TGGTGTTAATCAAATGCGAACA 57.162 36.364 0.00 0.00 0.00 3.18
2215 4971 4.346734 AGCATGCATAACTCAAACTTCG 57.653 40.909 21.98 0.00 0.00 3.79
2248 5005 6.353323 AGAGAGATCTCAAACAGACGAGATA 58.647 40.000 24.39 0.00 46.51 1.98
2252 5009 4.762251 TGAAGAGAGATCTCAAACAGACGA 59.238 41.667 24.39 0.00 45.21 4.20
2294 5051 6.372659 GCTAAATGATGAGTCCTCTGTTTTCA 59.627 38.462 0.00 0.00 0.00 2.69
2300 5057 5.821470 ACATTGCTAAATGATGAGTCCTCTG 59.179 40.000 5.49 0.00 45.17 3.35
2302 5059 5.008415 CCACATTGCTAAATGATGAGTCCTC 59.992 44.000 5.49 0.00 45.17 3.71
2303 5060 4.885907 CCACATTGCTAAATGATGAGTCCT 59.114 41.667 5.49 0.00 45.17 3.85
2304 5061 4.883585 TCCACATTGCTAAATGATGAGTCC 59.116 41.667 5.49 0.00 45.17 3.85
2305 5062 5.819379 TCTCCACATTGCTAAATGATGAGTC 59.181 40.000 5.49 0.00 45.17 3.36
2306 5063 5.748402 TCTCCACATTGCTAAATGATGAGT 58.252 37.500 5.49 0.00 45.17 3.41
2307 5064 6.688637 TTCTCCACATTGCTAAATGATGAG 57.311 37.500 5.49 9.48 45.17 2.90
2308 5065 7.649533 ATTTCTCCACATTGCTAAATGATGA 57.350 32.000 5.49 1.33 45.17 2.92
2315 5077 6.599244 CCTTCACTATTTCTCCACATTGCTAA 59.401 38.462 0.00 0.00 0.00 3.09
2328 5090 7.687941 TGGTTTTCAGATCCTTCACTATTTC 57.312 36.000 0.00 0.00 0.00 2.17
2420 5187 7.746475 GCACTAACTGTTTTTACATTCAGCTAG 59.254 37.037 0.00 0.00 34.67 3.42
2446 5213 3.947196 TGCCATCTGGTACTTTATTGCTG 59.053 43.478 0.00 0.00 37.57 4.41
2455 5222 5.431765 CTCAGTTAAATGCCATCTGGTACT 58.568 41.667 0.00 0.00 37.57 2.73
2456 5223 4.035675 GCTCAGTTAAATGCCATCTGGTAC 59.964 45.833 0.00 0.00 37.57 3.34
2457 5224 4.199310 GCTCAGTTAAATGCCATCTGGTA 58.801 43.478 0.00 0.00 37.57 3.25
2458 5225 3.019564 GCTCAGTTAAATGCCATCTGGT 58.980 45.455 0.00 0.00 37.57 4.00
2460 5227 2.032550 CCGCTCAGTTAAATGCCATCTG 59.967 50.000 0.00 0.00 0.00 2.90
2491 5303 4.574599 TCTTGAAAGAGAAAGGCAAAGC 57.425 40.909 0.00 0.00 0.00 3.51
2510 5322 7.761038 ATTCGAATAGTTGGGTTTCTTTTCT 57.239 32.000 9.39 0.00 0.00 2.52
2511 5323 9.902196 TTTATTCGAATAGTTGGGTTTCTTTTC 57.098 29.630 16.89 0.00 0.00 2.29
2522 5334 8.218441 TCGTGTGAAACTTTATTCGAATAGTTG 58.782 33.333 21.30 15.65 38.04 3.16
2541 5353 3.791973 AACAAGCCAAAAATCGTGTGA 57.208 38.095 0.00 0.00 0.00 3.58
2544 5356 5.020758 CACAAAAACAAGCCAAAAATCGTG 58.979 37.500 0.00 0.00 0.00 4.35
2664 5478 9.797556 CAATTAAATACTACTACCAAAAAGGCC 57.202 33.333 0.00 0.00 43.14 5.19
2683 5497 6.798427 TGGCAAGGCATATTACCAATTAAA 57.202 33.333 0.00 0.00 0.00 1.52
2704 5518 4.326504 ACCAAAAATGCAGTCTTCTTGG 57.673 40.909 12.81 12.81 38.23 3.61
2717 5531 9.863845 CGGAAAATAAGTACCATTACCAAAAAT 57.136 29.630 0.00 0.00 0.00 1.82
2718 5532 8.858094 ACGGAAAATAAGTACCATTACCAAAAA 58.142 29.630 0.00 0.00 0.00 1.94
2725 5539 8.851541 AGTTGAACGGAAAATAAGTACCATTA 57.148 30.769 0.00 0.00 0.00 1.90
2726 5540 7.754851 AGTTGAACGGAAAATAAGTACCATT 57.245 32.000 0.00 0.00 0.00 3.16
2727 5541 7.754851 AAGTTGAACGGAAAATAAGTACCAT 57.245 32.000 0.00 0.00 0.00 3.55
2728 5542 7.571080 AAAGTTGAACGGAAAATAAGTACCA 57.429 32.000 0.00 0.00 0.00 3.25
2737 5551 9.768662 AGTACTAGATAAAAGTTGAACGGAAAA 57.231 29.630 0.00 0.00 0.00 2.29
2740 5554 9.453572 TCTAGTACTAGATAAAAGTTGAACGGA 57.546 33.333 25.58 1.05 37.28 4.69
2755 5569 7.148052 GCAGTTTCTGGTTCATCTAGTACTAGA 60.148 40.741 29.96 29.96 37.97 2.43
2756 5570 6.975772 GCAGTTTCTGGTTCATCTAGTACTAG 59.024 42.308 21.87 21.87 31.67 2.57
2757 5571 6.663953 AGCAGTTTCTGGTTCATCTAGTACTA 59.336 38.462 1.89 1.89 39.27 1.82
2758 5572 5.482175 AGCAGTTTCTGGTTCATCTAGTACT 59.518 40.000 0.00 0.00 39.27 2.73
2759 5573 5.725362 AGCAGTTTCTGGTTCATCTAGTAC 58.275 41.667 0.00 0.00 39.27 2.73
2760 5574 7.363880 CCTTAGCAGTTTCTGGTTCATCTAGTA 60.364 40.741 6.77 0.00 42.44 1.82
2761 5575 4.899352 AGCAGTTTCTGGTTCATCTAGT 57.101 40.909 0.00 0.00 39.27 2.57
2762 5576 5.814705 CCTTAGCAGTTTCTGGTTCATCTAG 59.185 44.000 6.77 0.00 42.44 2.43
2763 5577 5.734720 CCTTAGCAGTTTCTGGTTCATCTA 58.265 41.667 6.77 0.00 42.44 1.98
2764 5578 4.583871 CCTTAGCAGTTTCTGGTTCATCT 58.416 43.478 6.77 0.00 42.44 2.90
2765 5579 3.127721 GCCTTAGCAGTTTCTGGTTCATC 59.872 47.826 6.77 0.00 42.44 2.92
2766 5580 3.084786 GCCTTAGCAGTTTCTGGTTCAT 58.915 45.455 6.77 0.00 42.44 2.57
2767 5581 2.158682 TGCCTTAGCAGTTTCTGGTTCA 60.159 45.455 6.77 0.00 46.52 3.18
2768 5582 2.504367 TGCCTTAGCAGTTTCTGGTTC 58.496 47.619 6.77 0.00 46.52 3.62
2769 5583 2.656947 TGCCTTAGCAGTTTCTGGTT 57.343 45.000 6.77 0.00 46.52 3.67
2779 5593 8.385849 GAACCTAATTCATCATCTGCCTTAGCA 61.386 40.741 0.00 0.00 41.28 3.49
2780 5594 5.312079 ACCTAATTCATCATCTGCCTTAGC 58.688 41.667 0.00 0.00 40.48 3.09
2781 5595 6.429385 GGAACCTAATTCATCATCTGCCTTAG 59.571 42.308 0.00 0.00 39.30 2.18
2782 5596 6.299141 GGAACCTAATTCATCATCTGCCTTA 58.701 40.000 0.00 0.00 39.30 2.69
2783 5597 5.136105 GGAACCTAATTCATCATCTGCCTT 58.864 41.667 0.00 0.00 39.30 4.35
2784 5598 4.723309 GGAACCTAATTCATCATCTGCCT 58.277 43.478 0.00 0.00 39.30 4.75
2834 5648 8.092068 TCGAGTTATGTTTCATAACAGAGGAAA 58.908 33.333 24.65 8.45 46.71 3.13
2835 5649 7.608153 TCGAGTTATGTTTCATAACAGAGGAA 58.392 34.615 24.65 9.17 46.71 3.36
2836 5650 7.165460 TCGAGTTATGTTTCATAACAGAGGA 57.835 36.000 24.65 16.28 46.71 3.71
2837 5651 8.425577 AATCGAGTTATGTTTCATAACAGAGG 57.574 34.615 24.65 14.94 46.71 3.69
2838 5652 8.262588 CGAATCGAGTTATGTTTCATAACAGAG 58.737 37.037 24.65 17.73 46.71 3.35
2839 5653 7.253983 GCGAATCGAGTTATGTTTCATAACAGA 60.254 37.037 24.65 22.50 46.71 3.41
2840 5654 6.841286 GCGAATCGAGTTATGTTTCATAACAG 59.159 38.462 24.65 19.61 46.71 3.16
2842 5656 6.623743 GTGCGAATCGAGTTATGTTTCATAAC 59.376 38.462 18.91 18.91 35.36 1.89
2843 5657 6.533723 AGTGCGAATCGAGTTATGTTTCATAA 59.466 34.615 6.91 0.00 0.00 1.90
2844 5658 6.040247 AGTGCGAATCGAGTTATGTTTCATA 58.960 36.000 6.91 0.00 0.00 2.15
2845 5659 4.870426 AGTGCGAATCGAGTTATGTTTCAT 59.130 37.500 6.91 0.00 0.00 2.57
2846 5660 4.242475 AGTGCGAATCGAGTTATGTTTCA 58.758 39.130 6.91 0.00 0.00 2.69
2847 5661 4.563184 AGAGTGCGAATCGAGTTATGTTTC 59.437 41.667 6.91 0.00 0.00 2.78
2848 5662 4.495422 AGAGTGCGAATCGAGTTATGTTT 58.505 39.130 6.91 0.00 0.00 2.83
2849 5663 4.111375 AGAGTGCGAATCGAGTTATGTT 57.889 40.909 6.91 0.00 0.00 2.71
2850 5664 3.784701 AGAGTGCGAATCGAGTTATGT 57.215 42.857 6.91 0.00 0.00 2.29
2851 5665 4.849883 AGTAGAGTGCGAATCGAGTTATG 58.150 43.478 6.91 0.00 0.00 1.90
2852 5666 4.575236 TGAGTAGAGTGCGAATCGAGTTAT 59.425 41.667 6.91 0.00 0.00 1.89
2853 5667 3.937079 TGAGTAGAGTGCGAATCGAGTTA 59.063 43.478 6.91 0.00 0.00 2.24
2854 5668 2.747989 TGAGTAGAGTGCGAATCGAGTT 59.252 45.455 6.91 0.00 0.00 3.01
2855 5669 2.357075 TGAGTAGAGTGCGAATCGAGT 58.643 47.619 6.91 0.00 0.00 4.18
2856 5670 3.406728 TTGAGTAGAGTGCGAATCGAG 57.593 47.619 6.91 0.00 0.00 4.04
2857 5671 3.128764 ACATTGAGTAGAGTGCGAATCGA 59.871 43.478 6.91 0.00 0.00 3.59
2858 5672 3.439293 ACATTGAGTAGAGTGCGAATCG 58.561 45.455 0.00 0.00 0.00 3.34
2881 5695 1.597461 GACCCACTGAGGTAGCACC 59.403 63.158 0.00 0.00 41.42 5.01
2882 5696 1.192146 TGGACCCACTGAGGTAGCAC 61.192 60.000 0.00 0.00 41.42 4.40
2883 5697 0.472925 TTGGACCCACTGAGGTAGCA 60.473 55.000 0.00 0.00 41.42 3.49
2884 5698 0.690762 TTTGGACCCACTGAGGTAGC 59.309 55.000 0.00 0.00 41.42 3.58
2885 5699 1.339151 GCTTTGGACCCACTGAGGTAG 60.339 57.143 0.00 0.00 41.42 3.18
2886 5700 0.690762 GCTTTGGACCCACTGAGGTA 59.309 55.000 0.00 0.00 41.42 3.08
2887 5701 1.352622 TGCTTTGGACCCACTGAGGT 61.353 55.000 0.00 0.00 45.12 3.85
2888 5702 0.038744 ATGCTTTGGACCCACTGAGG 59.961 55.000 0.00 0.00 37.03 3.86
2889 5703 2.787473 TATGCTTTGGACCCACTGAG 57.213 50.000 0.00 0.00 0.00 3.35
2890 5704 2.575735 TCATATGCTTTGGACCCACTGA 59.424 45.455 0.00 0.00 0.00 3.41
2891 5705 2.684881 GTCATATGCTTTGGACCCACTG 59.315 50.000 0.00 0.00 0.00 3.66
2892 5706 2.308570 TGTCATATGCTTTGGACCCACT 59.691 45.455 0.00 0.00 0.00 4.00
2893 5707 2.722094 TGTCATATGCTTTGGACCCAC 58.278 47.619 0.00 0.00 0.00 4.61
2894 5708 3.448093 TTGTCATATGCTTTGGACCCA 57.552 42.857 0.00 0.00 0.00 4.51
2895 5709 4.016444 TCTTTGTCATATGCTTTGGACCC 58.984 43.478 0.00 0.00 0.00 4.46
2896 5710 4.458989 TGTCTTTGTCATATGCTTTGGACC 59.541 41.667 0.00 0.00 0.00 4.46
2897 5711 5.627499 TGTCTTTGTCATATGCTTTGGAC 57.373 39.130 0.00 4.73 0.00 4.02
2898 5712 4.156556 GCTGTCTTTGTCATATGCTTTGGA 59.843 41.667 0.00 0.00 0.00 3.53
2899 5713 4.157289 AGCTGTCTTTGTCATATGCTTTGG 59.843 41.667 0.00 0.00 0.00 3.28
2900 5714 5.306532 AGCTGTCTTTGTCATATGCTTTG 57.693 39.130 0.00 0.00 0.00 2.77
2901 5715 4.093998 CGAGCTGTCTTTGTCATATGCTTT 59.906 41.667 0.00 0.00 0.00 3.51
2902 5716 3.620374 CGAGCTGTCTTTGTCATATGCTT 59.380 43.478 0.00 0.00 0.00 3.91
2903 5717 3.193263 CGAGCTGTCTTTGTCATATGCT 58.807 45.455 0.00 0.00 0.00 3.79
2904 5718 2.286067 GCGAGCTGTCTTTGTCATATGC 60.286 50.000 0.00 0.00 0.00 3.14
2905 5719 2.286294 GGCGAGCTGTCTTTGTCATATG 59.714 50.000 0.00 0.00 0.00 1.78
2906 5720 2.555199 GGCGAGCTGTCTTTGTCATAT 58.445 47.619 0.00 0.00 0.00 1.78
2907 5721 1.735700 CGGCGAGCTGTCTTTGTCATA 60.736 52.381 0.00 0.00 0.00 2.15
2908 5722 1.016130 CGGCGAGCTGTCTTTGTCAT 61.016 55.000 0.00 0.00 0.00 3.06
2909 5723 1.664649 CGGCGAGCTGTCTTTGTCA 60.665 57.895 0.00 0.00 0.00 3.58
2910 5724 1.222115 AACGGCGAGCTGTCTTTGTC 61.222 55.000 16.62 0.00 33.90 3.18
2911 5725 0.814010 AAACGGCGAGCTGTCTTTGT 60.814 50.000 16.62 0.00 33.90 2.83
2912 5726 0.110644 GAAACGGCGAGCTGTCTTTG 60.111 55.000 16.62 0.00 33.90 2.77
2913 5727 0.531974 TGAAACGGCGAGCTGTCTTT 60.532 50.000 16.62 0.49 33.90 2.52
2914 5728 0.946221 CTGAAACGGCGAGCTGTCTT 60.946 55.000 16.62 7.02 33.90 3.01
2915 5729 1.373497 CTGAAACGGCGAGCTGTCT 60.373 57.895 16.62 0.00 33.90 3.41
2916 5730 1.222115 AACTGAAACGGCGAGCTGTC 61.222 55.000 16.62 3.46 33.90 3.51
2917 5731 1.222115 GAACTGAAACGGCGAGCTGT 61.222 55.000 16.62 3.35 37.08 4.40
2918 5732 1.493311 GAACTGAAACGGCGAGCTG 59.507 57.895 16.62 8.71 0.00 4.24
2919 5733 1.668151 GGAACTGAAACGGCGAGCT 60.668 57.895 16.62 0.00 0.00 4.09
2920 5734 2.861006 GGAACTGAAACGGCGAGC 59.139 61.111 16.62 2.25 0.00 5.03
2921 5735 1.219522 AACGGAACTGAAACGGCGAG 61.220 55.000 16.62 2.02 0.00 5.03
2922 5736 1.216941 GAACGGAACTGAAACGGCGA 61.217 55.000 16.62 0.00 0.00 5.54
2923 5737 1.203313 GAACGGAACTGAAACGGCG 59.797 57.895 4.80 4.80 0.00 6.46
2924 5738 0.658897 TTGAACGGAACTGAAACGGC 59.341 50.000 0.00 0.00 0.00 5.68
2925 5739 2.353579 ACTTTGAACGGAACTGAAACGG 59.646 45.455 0.00 0.00 0.00 4.44
2926 5740 3.350912 CACTTTGAACGGAACTGAAACG 58.649 45.455 0.00 0.00 0.00 3.60
2927 5741 3.105937 GCACTTTGAACGGAACTGAAAC 58.894 45.455 0.00 0.00 0.00 2.78
2928 5742 2.098443 GGCACTTTGAACGGAACTGAAA 59.902 45.455 0.00 0.00 0.00 2.69
2929 5743 1.673920 GGCACTTTGAACGGAACTGAA 59.326 47.619 0.00 0.00 0.00 3.02
2930 5744 1.305201 GGCACTTTGAACGGAACTGA 58.695 50.000 0.00 0.00 0.00 3.41
2931 5745 1.021202 TGGCACTTTGAACGGAACTG 58.979 50.000 0.00 0.00 0.00 3.16
2932 5746 1.021968 GTGGCACTTTGAACGGAACT 58.978 50.000 11.13 0.00 0.00 3.01
2933 5747 0.316689 CGTGGCACTTTGAACGGAAC 60.317 55.000 16.72 0.00 32.55 3.62
2934 5748 0.745128 ACGTGGCACTTTGAACGGAA 60.745 50.000 16.72 0.00 40.25 4.30
2935 5749 1.153329 ACGTGGCACTTTGAACGGA 60.153 52.632 16.72 0.00 40.25 4.69
2936 5750 1.010125 CACGTGGCACTTTGAACGG 60.010 57.895 16.72 0.00 40.25 4.44
2937 5751 0.315869 GACACGTGGCACTTTGAACG 60.316 55.000 18.77 2.73 41.64 3.95
2938 5752 0.028902 GGACACGTGGCACTTTGAAC 59.971 55.000 25.47 0.00 0.00 3.18
2939 5753 0.107410 AGGACACGTGGCACTTTGAA 60.107 50.000 25.47 0.00 0.00 2.69
2940 5754 0.531974 GAGGACACGTGGCACTTTGA 60.532 55.000 25.47 0.00 0.00 2.69
2941 5755 1.831389 CGAGGACACGTGGCACTTTG 61.831 60.000 25.47 14.55 0.00 2.77
2942 5756 1.594293 CGAGGACACGTGGCACTTT 60.594 57.895 25.47 5.07 0.00 2.66
2943 5757 2.029073 CGAGGACACGTGGCACTT 59.971 61.111 25.47 8.00 0.00 3.16
2944 5758 4.664677 GCGAGGACACGTGGCACT 62.665 66.667 25.47 17.88 35.59 4.40
2947 5761 3.077519 ATAGGCGAGGACACGTGGC 62.078 63.158 21.57 18.48 35.59 5.01
2948 5762 1.226974 CATAGGCGAGGACACGTGG 60.227 63.158 21.57 2.06 35.59 4.94
2949 5763 1.878522 GCATAGGCGAGGACACGTG 60.879 63.158 15.48 15.48 35.59 4.49
2950 5764 2.494918 GCATAGGCGAGGACACGT 59.505 61.111 0.00 0.00 35.59 4.49
2951 5765 2.279517 GGCATAGGCGAGGACACG 60.280 66.667 0.00 0.00 42.47 4.49
2960 5774 0.603975 GAATCCCTGACGGCATAGGC 60.604 60.000 0.00 0.00 40.13 3.93
2961 5775 1.051812 AGAATCCCTGACGGCATAGG 58.948 55.000 0.00 0.00 0.00 2.57
2962 5776 2.874701 CAAAGAATCCCTGACGGCATAG 59.125 50.000 0.00 0.00 0.00 2.23
2963 5777 2.238646 ACAAAGAATCCCTGACGGCATA 59.761 45.455 0.00 0.00 0.00 3.14
2964 5778 1.004745 ACAAAGAATCCCTGACGGCAT 59.995 47.619 0.00 0.00 0.00 4.40
2965 5779 0.400213 ACAAAGAATCCCTGACGGCA 59.600 50.000 0.00 0.00 0.00 5.69
2966 5780 1.087501 GACAAAGAATCCCTGACGGC 58.912 55.000 0.00 0.00 0.00 5.68
2967 5781 1.337823 ACGACAAAGAATCCCTGACGG 60.338 52.381 8.32 0.00 33.57 4.79
2968 5782 1.993370 GACGACAAAGAATCCCTGACG 59.007 52.381 0.00 3.45 35.03 4.35
2969 5783 2.996621 CTGACGACAAAGAATCCCTGAC 59.003 50.000 0.00 0.00 0.00 3.51
2970 5784 2.612972 GCTGACGACAAAGAATCCCTGA 60.613 50.000 0.00 0.00 0.00 3.86
2971 5785 1.734465 GCTGACGACAAAGAATCCCTG 59.266 52.381 0.00 0.00 0.00 4.45
2972 5786 1.339151 GGCTGACGACAAAGAATCCCT 60.339 52.381 0.00 0.00 0.00 4.20
2973 5787 1.087501 GGCTGACGACAAAGAATCCC 58.912 55.000 0.00 0.00 0.00 3.85
2974 5788 2.100605 AGGCTGACGACAAAGAATCC 57.899 50.000 0.00 0.00 0.00 3.01
2975 5789 4.184629 ACATAGGCTGACGACAAAGAATC 58.815 43.478 0.00 0.00 0.00 2.52
2976 5790 4.081420 AGACATAGGCTGACGACAAAGAAT 60.081 41.667 0.00 0.00 0.00 2.40
2977 5791 3.258372 AGACATAGGCTGACGACAAAGAA 59.742 43.478 0.00 0.00 0.00 2.52
2978 5792 2.826128 AGACATAGGCTGACGACAAAGA 59.174 45.455 0.00 0.00 0.00 2.52
2979 5793 3.119316 AGAGACATAGGCTGACGACAAAG 60.119 47.826 0.00 0.00 0.00 2.77
2980 5794 2.826128 AGAGACATAGGCTGACGACAAA 59.174 45.455 0.00 0.00 0.00 2.83
2981 5795 2.423892 GAGAGACATAGGCTGACGACAA 59.576 50.000 0.00 0.00 0.00 3.18
2982 5796 2.017782 GAGAGACATAGGCTGACGACA 58.982 52.381 0.00 0.00 0.00 4.35
2983 5797 2.294074 AGAGAGACATAGGCTGACGAC 58.706 52.381 0.00 0.00 0.00 4.34
2984 5798 2.719531 AGAGAGACATAGGCTGACGA 57.280 50.000 0.00 0.00 0.00 4.20
2985 5799 3.443037 CAAAGAGAGACATAGGCTGACG 58.557 50.000 0.00 0.00 0.00 4.35
2986 5800 3.194062 GCAAAGAGAGACATAGGCTGAC 58.806 50.000 0.00 0.00 0.00 3.51
2987 5801 2.169352 GGCAAAGAGAGACATAGGCTGA 59.831 50.000 0.00 0.00 0.00 4.26
2988 5802 2.559440 GGCAAAGAGAGACATAGGCTG 58.441 52.381 0.00 0.00 0.00 4.85
2989 5803 1.137872 CGGCAAAGAGAGACATAGGCT 59.862 52.381 0.00 0.00 0.00 4.58
2990 5804 1.137086 TCGGCAAAGAGAGACATAGGC 59.863 52.381 0.00 0.00 0.00 3.93
2991 5805 3.742433 ATCGGCAAAGAGAGACATAGG 57.258 47.619 0.00 0.00 0.00 2.57
2992 5806 5.218885 CACTATCGGCAAAGAGAGACATAG 58.781 45.833 5.02 0.00 33.95 2.23
2993 5807 4.038042 CCACTATCGGCAAAGAGAGACATA 59.962 45.833 5.02 0.00 33.95 2.29
2994 5808 3.181471 CCACTATCGGCAAAGAGAGACAT 60.181 47.826 5.02 0.00 33.95 3.06
2995 5809 2.166459 CCACTATCGGCAAAGAGAGACA 59.834 50.000 5.02 0.00 33.95 3.41
2996 5810 2.166664 ACCACTATCGGCAAAGAGAGAC 59.833 50.000 5.02 0.00 33.95 3.36
2997 5811 2.457598 ACCACTATCGGCAAAGAGAGA 58.542 47.619 5.02 0.00 33.95 3.10
2998 5812 2.969628 ACCACTATCGGCAAAGAGAG 57.030 50.000 0.00 0.00 35.73 3.20
2999 5813 3.247006 GAACCACTATCGGCAAAGAGA 57.753 47.619 0.00 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.