Multiple sequence alignment - TraesCS5B01G462200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G462200 chr5B 100.000 2883 0 0 1 2883 637481659 637484541 0.000000e+00 5325.0
1 TraesCS5B01G462200 chr5B 81.619 593 90 12 2019 2598 54508262 54507676 9.350000e-130 473.0
2 TraesCS5B01G462200 chr5B 81.982 444 69 8 2021 2457 315942772 315942333 1.630000e-97 366.0
3 TraesCS5B01G462200 chr5B 78.401 588 109 17 2021 2598 658585842 658585263 1.630000e-97 366.0
4 TraesCS5B01G462200 chr5B 93.122 189 12 1 2563 2751 637891075 637891262 2.830000e-70 276.0
5 TraesCS5B01G462200 chr5B 90.476 189 17 1 2563 2751 637765003 637765190 6.170000e-62 248.0
6 TraesCS5B01G462200 chr5B 97.273 110 1 2 2772 2881 699229833 699229940 4.910000e-43 185.0
7 TraesCS5B01G462200 chr5D 93.481 1856 79 26 95 1933 507434061 507435891 0.000000e+00 2719.0
8 TraesCS5B01G462200 chr5D 93.122 189 13 0 2563 2751 507558611 507558799 7.870000e-71 278.0
9 TraesCS5B01G462200 chr5A 90.841 1343 74 20 585 1890 634621969 634623299 0.000000e+00 1753.0
10 TraesCS5B01G462200 chr5A 87.447 470 34 13 97 556 634621516 634621970 4.260000e-143 518.0
11 TraesCS5B01G462200 chr5A 92.021 188 10 2 2564 2751 635268201 635268383 2.850000e-65 259.0
12 TraesCS5B01G462200 chr2D 83.277 592 83 9 2019 2598 604074467 604075054 5.470000e-147 531.0
13 TraesCS5B01G462200 chr2D 83.025 595 76 17 2019 2598 638305520 638304936 1.530000e-142 516.0
14 TraesCS5B01G462200 chr7A 83.051 590 75 13 2019 2597 718520790 718521365 1.980000e-141 512.0
15 TraesCS5B01G462200 chr7A 82.373 590 79 13 2019 2597 718525694 718526269 9.280000e-135 490.0
16 TraesCS5B01G462200 chr6D 82.960 581 72 14 2019 2586 461867092 461867658 1.540000e-137 499.0
17 TraesCS5B01G462200 chr7D 81.387 591 90 14 2019 2598 269707261 269706680 5.630000e-127 464.0
18 TraesCS5B01G462200 chr4A 81.695 590 74 18 2019 2597 80853457 80852891 7.280000e-126 460.0
19 TraesCS5B01G462200 chr4A 82.243 428 62 9 2019 2437 32686522 32686100 9.820000e-95 357.0
20 TraesCS5B01G462200 chr4A 96.460 113 3 1 2772 2883 712408807 712408919 4.910000e-43 185.0
21 TraesCS5B01G462200 chr6A 79.258 593 102 16 2019 2598 540317107 540317691 7.490000e-106 394.0
22 TraesCS5B01G462200 chr3D 81.818 484 71 10 2116 2586 121797457 121796978 9.690000e-105 390.0
23 TraesCS5B01G462200 chr3D 82.412 398 57 9 2021 2410 473445926 473445534 4.600000e-88 335.0
24 TraesCS5B01G462200 chr1D 80.050 401 66 8 2019 2418 486121711 486122098 4.700000e-73 285.0
25 TraesCS5B01G462200 chr1D 86.122 245 25 4 2019 2254 482827554 482827798 3.690000e-64 255.0
26 TraesCS5B01G462200 chr1D 90.909 44 4 0 1358 1401 437285169 437285126 3.100000e-05 60.2
27 TraesCS5B01G462200 chr1B 96.522 115 4 0 2769 2883 395741996 395742110 1.050000e-44 191.0
28 TraesCS5B01G462200 chr1B 99.048 105 1 0 2779 2883 179143353 179143457 3.790000e-44 189.0
29 TraesCS5B01G462200 chr1B 96.429 112 3 1 2772 2883 99546656 99546766 1.760000e-42 183.0
30 TraesCS5B01G462200 chr2B 99.048 105 1 0 2779 2883 212970874 212970978 3.790000e-44 189.0
31 TraesCS5B01G462200 chr2B 99.048 105 1 0 2779 2883 212977768 212977872 3.790000e-44 189.0
32 TraesCS5B01G462200 chr2B 98.131 107 2 0 2777 2883 788456326 788456220 1.360000e-43 187.0
33 TraesCS5B01G462200 chr2B 84.337 83 13 0 1358 1440 680540751 680540669 6.620000e-12 82.4
34 TraesCS5B01G462200 chr6B 98.148 108 1 1 2774 2881 147483391 147483285 1.360000e-43 187.0
35 TraesCS5B01G462200 chr4B 81.928 83 12 2 1358 1440 624135564 624135643 1.850000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G462200 chr5B 637481659 637484541 2882 False 5325.0 5325 100.000 1 2883 1 chr5B.!!$F1 2882
1 TraesCS5B01G462200 chr5B 54507676 54508262 586 True 473.0 473 81.619 2019 2598 1 chr5B.!!$R1 579
2 TraesCS5B01G462200 chr5B 658585263 658585842 579 True 366.0 366 78.401 2021 2598 1 chr5B.!!$R3 577
3 TraesCS5B01G462200 chr5D 507434061 507435891 1830 False 2719.0 2719 93.481 95 1933 1 chr5D.!!$F1 1838
4 TraesCS5B01G462200 chr5A 634621516 634623299 1783 False 1135.5 1753 89.144 97 1890 2 chr5A.!!$F2 1793
5 TraesCS5B01G462200 chr2D 604074467 604075054 587 False 531.0 531 83.277 2019 2598 1 chr2D.!!$F1 579
6 TraesCS5B01G462200 chr2D 638304936 638305520 584 True 516.0 516 83.025 2019 2598 1 chr2D.!!$R1 579
7 TraesCS5B01G462200 chr7A 718520790 718521365 575 False 512.0 512 83.051 2019 2597 1 chr7A.!!$F1 578
8 TraesCS5B01G462200 chr7A 718525694 718526269 575 False 490.0 490 82.373 2019 2597 1 chr7A.!!$F2 578
9 TraesCS5B01G462200 chr6D 461867092 461867658 566 False 499.0 499 82.960 2019 2586 1 chr6D.!!$F1 567
10 TraesCS5B01G462200 chr7D 269706680 269707261 581 True 464.0 464 81.387 2019 2598 1 chr7D.!!$R1 579
11 TraesCS5B01G462200 chr4A 80852891 80853457 566 True 460.0 460 81.695 2019 2597 1 chr4A.!!$R2 578
12 TraesCS5B01G462200 chr6A 540317107 540317691 584 False 394.0 394 79.258 2019 2598 1 chr6A.!!$F1 579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
80 81 0.032813 CATGGAGGAGGTTGGGCAAT 60.033 55.0 0.0 0.0 0.0 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1993 2047 0.109735 CTTGACTCGCTCGCACTACA 60.11 55.0 0.0 0.0 0.0 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.796495 GCTCACGGGGCGGGAAAT 62.796 66.667 0.00 0.00 39.37 2.17
19 20 2.904905 CTCACGGGGCGGGAAATA 59.095 61.111 0.00 0.00 39.37 1.40
20 21 1.222387 CTCACGGGGCGGGAAATAA 59.778 57.895 0.00 0.00 39.37 1.40
21 22 0.814010 CTCACGGGGCGGGAAATAAG 60.814 60.000 0.00 0.00 39.37 1.73
22 23 1.078001 CACGGGGCGGGAAATAAGT 60.078 57.895 0.00 0.00 28.17 2.24
23 24 0.678684 CACGGGGCGGGAAATAAGTT 60.679 55.000 0.00 0.00 28.17 2.66
24 25 0.038599 ACGGGGCGGGAAATAAGTTT 59.961 50.000 0.00 0.00 0.00 2.66
25 26 0.736636 CGGGGCGGGAAATAAGTTTC 59.263 55.000 0.00 0.00 42.39 2.78
26 27 1.842052 GGGGCGGGAAATAAGTTTCA 58.158 50.000 3.64 0.00 44.42 2.69
27 28 2.384828 GGGGCGGGAAATAAGTTTCAT 58.615 47.619 3.64 0.00 44.42 2.57
28 29 3.558033 GGGGCGGGAAATAAGTTTCATA 58.442 45.455 3.64 0.00 44.42 2.15
29 30 3.317149 GGGGCGGGAAATAAGTTTCATAC 59.683 47.826 3.64 0.00 44.42 2.39
30 31 3.949113 GGGCGGGAAATAAGTTTCATACA 59.051 43.478 3.64 0.00 44.42 2.29
31 32 4.201980 GGGCGGGAAATAAGTTTCATACAC 60.202 45.833 3.64 0.00 44.42 2.90
32 33 4.201980 GGCGGGAAATAAGTTTCATACACC 60.202 45.833 3.64 0.00 44.42 4.16
33 34 4.396790 GCGGGAAATAAGTTTCATACACCA 59.603 41.667 3.64 0.00 44.42 4.17
34 35 5.106078 GCGGGAAATAAGTTTCATACACCAA 60.106 40.000 3.64 0.00 44.42 3.67
35 36 6.405397 GCGGGAAATAAGTTTCATACACCAAT 60.405 38.462 3.64 0.00 44.42 3.16
36 37 7.201750 GCGGGAAATAAGTTTCATACACCAATA 60.202 37.037 3.64 0.00 44.42 1.90
37 38 8.679100 CGGGAAATAAGTTTCATACACCAATAA 58.321 33.333 3.64 0.00 44.42 1.40
46 47 9.436957 AGTTTCATACACCAATAAGTAGAAGTG 57.563 33.333 0.00 0.00 0.00 3.16
47 48 9.216117 GTTTCATACACCAATAAGTAGAAGTGT 57.784 33.333 0.00 0.00 41.12 3.55
50 51 9.470399 TCATACACCAATAAGTAGAAGTGTAGA 57.530 33.333 6.90 2.91 42.17 2.59
53 54 7.384477 ACACCAATAAGTAGAAGTGTAGAACC 58.616 38.462 0.00 0.00 36.73 3.62
54 55 7.015877 ACACCAATAAGTAGAAGTGTAGAACCA 59.984 37.037 0.00 0.00 36.73 3.67
55 56 8.041323 CACCAATAAGTAGAAGTGTAGAACCAT 58.959 37.037 0.00 0.00 0.00 3.55
56 57 9.263446 ACCAATAAGTAGAAGTGTAGAACCATA 57.737 33.333 0.00 0.00 0.00 2.74
61 62 6.631962 AGTAGAAGTGTAGAACCATAAGTGC 58.368 40.000 0.00 0.00 0.00 4.40
62 63 5.483685 AGAAGTGTAGAACCATAAGTGCA 57.516 39.130 0.00 0.00 0.00 4.57
63 64 6.054860 AGAAGTGTAGAACCATAAGTGCAT 57.945 37.500 0.00 0.00 0.00 3.96
64 65 5.877012 AGAAGTGTAGAACCATAAGTGCATG 59.123 40.000 0.00 0.00 0.00 4.06
73 74 3.287867 CATAAGTGCATGGAGGAGGTT 57.712 47.619 0.00 0.00 0.00 3.50
74 75 2.787473 TAAGTGCATGGAGGAGGTTG 57.213 50.000 0.00 0.00 0.00 3.77
75 76 0.038744 AAGTGCATGGAGGAGGTTGG 59.961 55.000 0.00 0.00 0.00 3.77
76 77 1.379044 GTGCATGGAGGAGGTTGGG 60.379 63.158 0.00 0.00 0.00 4.12
77 78 2.440980 GCATGGAGGAGGTTGGGC 60.441 66.667 0.00 0.00 0.00 5.36
78 79 3.089838 CATGGAGGAGGTTGGGCA 58.910 61.111 0.00 0.00 0.00 5.36
79 80 1.383799 CATGGAGGAGGTTGGGCAA 59.616 57.895 0.00 0.00 0.00 4.52
80 81 0.032813 CATGGAGGAGGTTGGGCAAT 60.033 55.000 0.00 0.00 0.00 3.56
81 82 0.259938 ATGGAGGAGGTTGGGCAATC 59.740 55.000 0.00 0.00 0.00 2.67
82 83 1.076705 GGAGGAGGTTGGGCAATCC 60.077 63.158 0.00 0.00 0.00 3.01
83 84 1.691219 GAGGAGGTTGGGCAATCCA 59.309 57.895 0.00 0.00 45.43 3.41
92 93 3.737172 GGCAATCCACGCACGCTT 61.737 61.111 0.00 0.00 0.00 4.68
93 94 2.202349 GCAATCCACGCACGCTTC 60.202 61.111 0.00 0.00 0.00 3.86
131 132 0.179181 GTGGTGAGCATTGCATGACG 60.179 55.000 11.91 0.00 0.00 4.35
132 133 0.321475 TGGTGAGCATTGCATGACGA 60.321 50.000 11.91 0.00 0.00 4.20
133 134 0.097674 GGTGAGCATTGCATGACGAC 59.902 55.000 11.91 0.00 0.00 4.34
162 163 0.768622 TGGTTCGGTTCACCTTCCAT 59.231 50.000 0.00 0.00 35.07 3.41
165 166 1.810755 GTTCGGTTCACCTTCCATTCC 59.189 52.381 0.00 0.00 0.00 3.01
168 169 2.017049 CGGTTCACCTTCCATTCCATC 58.983 52.381 0.00 0.00 0.00 3.51
175 176 2.092914 ACCTTCCATTCCATCGGAGAAC 60.093 50.000 0.00 0.00 43.58 3.01
178 179 3.266510 TCCATTCCATCGGAGAACAAG 57.733 47.619 0.00 0.00 43.58 3.16
179 180 2.571653 TCCATTCCATCGGAGAACAAGT 59.428 45.455 0.00 0.00 43.58 3.16
180 181 2.679837 CCATTCCATCGGAGAACAAGTG 59.320 50.000 0.00 0.00 43.58 3.16
182 183 3.762407 TTCCATCGGAGAACAAGTGAA 57.238 42.857 0.00 0.00 43.58 3.18
186 187 5.070001 TCCATCGGAGAACAAGTGAAAAAT 58.930 37.500 0.00 0.00 43.58 1.82
187 188 5.181245 TCCATCGGAGAACAAGTGAAAAATC 59.819 40.000 0.00 0.00 43.58 2.17
188 189 5.182001 CCATCGGAGAACAAGTGAAAAATCT 59.818 40.000 0.00 0.00 43.58 2.40
191 192 6.055588 TCGGAGAACAAGTGAAAAATCTCTT 58.944 36.000 0.00 0.00 34.98 2.85
196 198 7.840931 AGAACAAGTGAAAAATCTCTTTTGGT 58.159 30.769 0.00 0.00 34.81 3.67
245 248 3.942130 CCAAAAATCTTGGTCACCCTC 57.058 47.619 0.00 0.00 34.92 4.30
246 249 3.230134 CCAAAAATCTTGGTCACCCTCA 58.770 45.455 0.00 0.00 34.92 3.86
248 251 2.586648 AAATCTTGGTCACCCTCACC 57.413 50.000 0.00 0.00 0.00 4.02
249 252 0.698818 AATCTTGGTCACCCTCACCC 59.301 55.000 0.00 0.00 32.24 4.61
250 253 0.178861 ATCTTGGTCACCCTCACCCT 60.179 55.000 0.00 0.00 32.24 4.34
251 254 0.490017 TCTTGGTCACCCTCACCCTA 59.510 55.000 0.00 0.00 32.24 3.53
302 305 2.282407 CTGATGGCGATGATGAACACA 58.718 47.619 0.00 0.00 0.00 3.72
383 393 4.973360 CGCCAAACACCAACCGCG 62.973 66.667 0.00 0.00 0.00 6.46
474 484 1.654220 CGGTTGGACTTTGCACCAG 59.346 57.895 0.00 0.00 37.48 4.00
481 491 3.211045 TGGACTTTGCACCAGTTAGTTC 58.789 45.455 0.00 0.00 0.00 3.01
488 498 6.096846 ACTTTGCACCAGTTAGTTCAGAAAAT 59.903 34.615 0.00 0.00 0.00 1.82
566 580 8.041323 AGTATGCCAATTACATATGGTACTAGC 58.959 37.037 7.80 4.06 39.00 3.42
571 585 7.010183 GCCAATTACATATGGTACTAGCATACG 59.990 40.741 7.80 5.19 40.81 3.06
717 736 5.528043 ACTTCATGTAATTGCACCAAACA 57.472 34.783 0.00 0.00 0.00 2.83
723 742 7.095910 TCATGTAATTGCACCAAACATAAAGG 58.904 34.615 0.00 0.00 27.95 3.11
738 757 6.628919 ACATAAAGGTTTGTCTGTAACACC 57.371 37.500 0.00 0.00 37.70 4.16
739 758 5.237779 ACATAAAGGTTTGTCTGTAACACCG 59.762 40.000 0.00 0.00 37.70 4.94
751 770 6.131389 GTCTGTAACACCGTGTGTATTTTTC 58.869 40.000 4.57 0.00 46.79 2.29
752 771 5.816258 TCTGTAACACCGTGTGTATTTTTCA 59.184 36.000 4.57 0.00 46.79 2.69
753 772 5.808403 TGTAACACCGTGTGTATTTTTCAC 58.192 37.500 4.57 0.00 46.79 3.18
754 773 5.585445 TGTAACACCGTGTGTATTTTTCACT 59.415 36.000 4.57 0.00 46.79 3.41
755 774 6.760298 TGTAACACCGTGTGTATTTTTCACTA 59.240 34.615 4.57 0.00 46.79 2.74
757 776 6.870971 ACACCGTGTGTATTTTTCACTATT 57.129 33.333 2.57 0.00 45.56 1.73
761 780 8.476142 CACCGTGTGTATTTTTCACTATTTTTG 58.524 33.333 0.00 0.00 36.83 2.44
763 782 9.666626 CCGTGTGTATTTTTCACTATTTTTGTA 57.333 29.630 0.00 0.00 36.83 2.41
830 849 2.565834 CCCCCGATTAGTTACCGATGAT 59.434 50.000 0.00 0.00 0.00 2.45
1042 1064 3.181503 CCAACAATCTCATCGGCTCTTTG 60.182 47.826 0.00 0.00 0.00 2.77
1060 1086 6.173191 TCTTTGAAAAGAAAACGTCTCGTT 57.827 33.333 3.00 1.64 44.56 3.85
1092 1118 1.680735 GCTCCAGAGTCTCGATCATGT 59.319 52.381 0.00 0.00 0.00 3.21
1099 1125 1.048494 GTCTCGATCATGTCATCGCG 58.952 55.000 10.98 0.00 44.48 5.87
1241 1267 4.966787 GGGTTCCCGTGCAAGCCA 62.967 66.667 0.00 0.00 40.54 4.75
1467 1493 3.596667 GAGCTCGTGCACGTCGTCT 62.597 63.158 35.74 26.17 42.74 4.18
1550 1576 0.618968 AGGGGGAGAGCTTCGTCATT 60.619 55.000 0.00 0.00 0.00 2.57
1593 1619 0.818040 GTTCAACACCGGCAAGGAGT 60.818 55.000 0.00 0.00 46.01 3.85
1643 1669 3.020237 GCTCCCCGGAGTTGTCCTC 62.020 68.421 0.73 0.00 43.70 3.71
1933 1987 9.528018 TTAAAATCAAACTTTTACCTCTTGCTG 57.472 29.630 0.00 0.00 31.96 4.41
1934 1988 6.959639 AATCAAACTTTTACCTCTTGCTGA 57.040 33.333 0.00 0.00 0.00 4.26
1935 1989 5.751243 TCAAACTTTTACCTCTTGCTGAC 57.249 39.130 0.00 0.00 0.00 3.51
1936 1990 4.272504 TCAAACTTTTACCTCTTGCTGACG 59.727 41.667 0.00 0.00 0.00 4.35
1937 1991 2.767505 ACTTTTACCTCTTGCTGACGG 58.232 47.619 0.00 0.00 0.00 4.79
1938 1992 2.076863 CTTTTACCTCTTGCTGACGGG 58.923 52.381 0.00 0.00 0.00 5.28
1939 1993 0.323629 TTTACCTCTTGCTGACGGGG 59.676 55.000 0.00 0.00 0.00 5.73
1940 1994 1.550130 TTACCTCTTGCTGACGGGGG 61.550 60.000 0.00 0.00 0.00 5.40
1941 1995 4.785453 CCTCTTGCTGACGGGGGC 62.785 72.222 0.00 0.00 0.00 5.80
1942 1996 3.710722 CTCTTGCTGACGGGGGCT 61.711 66.667 0.00 0.00 0.00 5.19
1943 1997 2.284331 TCTTGCTGACGGGGGCTA 60.284 61.111 0.00 0.00 0.00 3.93
1944 1998 1.689233 TCTTGCTGACGGGGGCTAT 60.689 57.895 0.00 0.00 0.00 2.97
1945 1999 1.224592 CTTGCTGACGGGGGCTATT 59.775 57.895 0.00 0.00 0.00 1.73
1946 2000 0.394352 CTTGCTGACGGGGGCTATTT 60.394 55.000 0.00 0.00 0.00 1.40
1947 2001 0.039035 TTGCTGACGGGGGCTATTTT 59.961 50.000 0.00 0.00 0.00 1.82
1948 2002 0.039035 TGCTGACGGGGGCTATTTTT 59.961 50.000 0.00 0.00 0.00 1.94
1949 2003 1.282447 TGCTGACGGGGGCTATTTTTA 59.718 47.619 0.00 0.00 0.00 1.52
1950 2004 1.947456 GCTGACGGGGGCTATTTTTAG 59.053 52.381 0.00 0.00 0.00 1.85
1951 2005 2.420967 GCTGACGGGGGCTATTTTTAGA 60.421 50.000 0.00 0.00 0.00 2.10
1952 2006 3.467803 CTGACGGGGGCTATTTTTAGAG 58.532 50.000 0.00 0.00 0.00 2.43
1953 2007 2.171870 TGACGGGGGCTATTTTTAGAGG 59.828 50.000 0.00 0.00 0.00 3.69
1954 2008 2.172082 GACGGGGGCTATTTTTAGAGGT 59.828 50.000 0.00 0.00 0.00 3.85
1955 2009 2.172082 ACGGGGGCTATTTTTAGAGGTC 59.828 50.000 0.00 0.00 0.00 3.85
1956 2010 2.438392 CGGGGGCTATTTTTAGAGGTCT 59.562 50.000 0.00 0.00 0.00 3.85
1957 2011 3.744530 CGGGGGCTATTTTTAGAGGTCTG 60.745 52.174 0.00 0.00 0.00 3.51
1958 2012 3.458487 GGGGGCTATTTTTAGAGGTCTGA 59.542 47.826 0.00 0.00 0.00 3.27
1959 2013 4.079958 GGGGGCTATTTTTAGAGGTCTGAA 60.080 45.833 0.00 0.00 0.00 3.02
1960 2014 5.506708 GGGGCTATTTTTAGAGGTCTGAAA 58.493 41.667 0.00 0.00 30.91 2.69
1961 2015 5.590663 GGGGCTATTTTTAGAGGTCTGAAAG 59.409 44.000 0.00 0.00 33.83 2.62
1962 2016 6.181190 GGGCTATTTTTAGAGGTCTGAAAGT 58.819 40.000 0.00 0.00 33.83 2.66
1963 2017 7.336396 GGGCTATTTTTAGAGGTCTGAAAGTA 58.664 38.462 0.00 0.00 33.83 2.24
1964 2018 7.280428 GGGCTATTTTTAGAGGTCTGAAAGTAC 59.720 40.741 0.00 0.00 33.83 2.73
1965 2019 7.822822 GGCTATTTTTAGAGGTCTGAAAGTACA 59.177 37.037 0.00 0.00 33.83 2.90
1966 2020 9.216117 GCTATTTTTAGAGGTCTGAAAGTACAA 57.784 33.333 0.00 0.00 33.83 2.41
1968 2022 8.622948 ATTTTTAGAGGTCTGAAAGTACAAGG 57.377 34.615 0.00 0.00 33.83 3.61
1969 2023 6.989155 TTTAGAGGTCTGAAAGTACAAGGA 57.011 37.500 0.00 0.00 33.76 3.36
1970 2024 4.875561 AGAGGTCTGAAAGTACAAGGAC 57.124 45.455 0.00 0.00 33.76 3.85
1971 2025 4.484912 AGAGGTCTGAAAGTACAAGGACT 58.515 43.478 0.00 0.00 33.76 3.85
1972 2026 4.902448 AGAGGTCTGAAAGTACAAGGACTT 59.098 41.667 0.00 0.00 41.50 3.01
1982 2036 7.827819 AAAGTACAAGGACTTTTCTTTTTGC 57.172 32.000 4.60 0.00 45.30 3.68
1983 2037 6.524101 AGTACAAGGACTTTTCTTTTTGCA 57.476 33.333 0.00 0.00 0.00 4.08
1984 2038 6.930731 AGTACAAGGACTTTTCTTTTTGCAA 58.069 32.000 0.00 0.00 0.00 4.08
1985 2039 7.382898 AGTACAAGGACTTTTCTTTTTGCAAA 58.617 30.769 8.05 8.05 0.00 3.68
1986 2040 8.040727 AGTACAAGGACTTTTCTTTTTGCAAAT 58.959 29.630 13.65 0.00 0.00 2.32
1987 2041 9.308318 GTACAAGGACTTTTCTTTTTGCAAATA 57.692 29.630 13.65 7.47 0.00 1.40
1988 2042 8.196802 ACAAGGACTTTTCTTTTTGCAAATAC 57.803 30.769 13.65 0.00 0.00 1.89
1989 2043 7.010091 ACAAGGACTTTTCTTTTTGCAAATACG 59.990 33.333 13.65 4.71 0.00 3.06
1990 2044 6.801575 AGGACTTTTCTTTTTGCAAATACGA 58.198 32.000 13.65 7.06 0.00 3.43
1991 2045 6.918022 AGGACTTTTCTTTTTGCAAATACGAG 59.082 34.615 13.65 9.03 0.00 4.18
1992 2046 6.143919 GGACTTTTCTTTTTGCAAATACGAGG 59.856 38.462 13.65 0.00 0.00 4.63
1993 2047 6.569780 ACTTTTCTTTTTGCAAATACGAGGT 58.430 32.000 13.65 4.72 0.00 3.85
1994 2048 6.475402 ACTTTTCTTTTTGCAAATACGAGGTG 59.525 34.615 13.65 3.50 0.00 4.00
1995 2049 5.508200 TTCTTTTTGCAAATACGAGGTGT 57.492 34.783 13.65 0.00 0.00 4.16
1996 2050 6.621316 TTCTTTTTGCAAATACGAGGTGTA 57.379 33.333 13.65 0.00 37.49 2.90
1997 2051 6.236017 TCTTTTTGCAAATACGAGGTGTAG 57.764 37.500 13.65 0.00 36.25 2.74
1998 2052 5.761234 TCTTTTTGCAAATACGAGGTGTAGT 59.239 36.000 13.65 0.00 36.25 2.73
1999 2053 5.351233 TTTTGCAAATACGAGGTGTAGTG 57.649 39.130 13.65 0.00 36.25 2.74
2000 2054 2.343101 TGCAAATACGAGGTGTAGTGC 58.657 47.619 0.00 6.58 43.39 4.40
2001 2055 1.323534 GCAAATACGAGGTGTAGTGCG 59.676 52.381 0.00 0.00 37.91 5.34
2002 2056 2.871133 CAAATACGAGGTGTAGTGCGA 58.129 47.619 0.00 0.00 36.25 5.10
2003 2057 2.846039 AATACGAGGTGTAGTGCGAG 57.154 50.000 0.00 0.00 36.25 5.03
2004 2058 0.381089 ATACGAGGTGTAGTGCGAGC 59.619 55.000 0.00 0.00 36.25 5.03
2005 2059 1.974249 TACGAGGTGTAGTGCGAGCG 61.974 60.000 0.00 0.00 0.00 5.03
2006 2060 2.875485 GAGGTGTAGTGCGAGCGA 59.125 61.111 0.00 0.00 0.00 4.93
2007 2061 1.226435 GAGGTGTAGTGCGAGCGAG 60.226 63.158 0.00 0.00 0.00 5.03
2008 2062 1.924320 GAGGTGTAGTGCGAGCGAGT 61.924 60.000 0.00 0.00 0.00 4.18
2009 2063 1.514443 GGTGTAGTGCGAGCGAGTC 60.514 63.158 0.00 0.00 0.00 3.36
2010 2064 1.209383 GTGTAGTGCGAGCGAGTCA 59.791 57.895 0.00 0.00 0.00 3.41
2011 2065 0.386858 GTGTAGTGCGAGCGAGTCAA 60.387 55.000 0.00 0.00 0.00 3.18
2012 2066 0.109735 TGTAGTGCGAGCGAGTCAAG 60.110 55.000 0.00 0.00 0.00 3.02
2013 2067 1.154016 TAGTGCGAGCGAGTCAAGC 60.154 57.895 0.00 0.00 0.00 4.01
2014 2068 1.862602 TAGTGCGAGCGAGTCAAGCA 61.863 55.000 0.00 0.00 37.01 3.91
2015 2069 2.097038 GTGCGAGCGAGTCAAGCAT 61.097 57.895 0.00 0.00 40.11 3.79
2016 2070 1.374631 TGCGAGCGAGTCAAGCATT 60.375 52.632 0.00 0.00 37.01 3.56
2103 2157 2.892425 CCGCCAGAATGAGCCGTC 60.892 66.667 0.00 0.00 39.69 4.79
2104 2158 2.125552 CGCCAGAATGAGCCGTCA 60.126 61.111 0.00 0.00 39.69 4.35
2105 2159 1.741401 CGCCAGAATGAGCCGTCAA 60.741 57.895 0.00 0.00 39.69 3.18
2106 2160 1.796796 GCCAGAATGAGCCGTCAAC 59.203 57.895 0.00 0.00 39.69 3.18
2107 2161 1.970917 GCCAGAATGAGCCGTCAACG 61.971 60.000 0.00 0.00 39.69 4.10
2108 2162 1.421485 CAGAATGAGCCGTCAACGC 59.579 57.895 0.00 0.00 39.69 4.84
2109 2163 1.005037 AGAATGAGCCGTCAACGCA 60.005 52.632 0.00 0.00 35.88 5.24
2234 2309 2.747436 TCGCCGATGAATTGATCTGAG 58.253 47.619 3.35 0.00 0.00 3.35
2255 2330 3.263425 AGGAACCTGACACCAAATATCGT 59.737 43.478 0.00 0.00 0.00 3.73
2257 2332 4.504858 GAACCTGACACCAAATATCGTCT 58.495 43.478 0.00 0.00 0.00 4.18
2258 2333 4.124851 ACCTGACACCAAATATCGTCTC 57.875 45.455 0.00 0.00 0.00 3.36
2259 2334 3.769844 ACCTGACACCAAATATCGTCTCT 59.230 43.478 0.00 0.00 0.00 3.10
2294 2369 1.760613 CAAGATACCCTAACCTCGCCA 59.239 52.381 0.00 0.00 0.00 5.69
2367 2442 5.865552 CCAACGAACGAACTTAAGGAGAATA 59.134 40.000 7.53 0.00 0.00 1.75
2372 2447 5.855740 ACGAACTTAAGGAGAATAGGAGG 57.144 43.478 7.53 0.00 0.00 4.30
2391 2466 1.604693 GGCCGAAAGACTGACTCGAAA 60.605 52.381 0.00 0.00 34.52 3.46
2393 2468 2.096860 GCCGAAAGACTGACTCGAAAAC 60.097 50.000 4.01 0.00 34.52 2.43
2396 2471 3.118157 CGAAAGACTGACTCGAAAACGAG 59.882 47.826 16.22 16.22 41.38 4.18
2425 2501 3.451894 CATCCAAACGCTGCCCCC 61.452 66.667 0.00 0.00 0.00 5.40
2426 2502 3.978193 ATCCAAACGCTGCCCCCA 61.978 61.111 0.00 0.00 0.00 4.96
2458 2534 7.790314 ACTAAAATCCTACCAATCTACTAGCCT 59.210 37.037 0.00 0.00 0.00 4.58
2466 2542 5.211973 ACCAATCTACTAGCCTGATCTGAA 58.788 41.667 0.38 0.00 0.00 3.02
2484 2560 2.716424 TGAAACACCAGAAATCCCCTCT 59.284 45.455 0.00 0.00 0.00 3.69
2492 2568 2.925162 GAAATCCCCTCTCCGCCACG 62.925 65.000 0.00 0.00 0.00 4.94
2556 2634 0.752009 CGGTGAAGATCGAGGGGAGA 60.752 60.000 0.00 0.00 0.00 3.71
2557 2635 1.486211 GGTGAAGATCGAGGGGAGAA 58.514 55.000 0.00 0.00 0.00 2.87
2598 2678 4.310769 CTTGCGAGAGGAGAAAGAAAAGA 58.689 43.478 0.00 0.00 0.00 2.52
2599 2679 4.543590 TGCGAGAGGAGAAAGAAAAGAT 57.456 40.909 0.00 0.00 0.00 2.40
2600 2680 4.248859 TGCGAGAGGAGAAAGAAAAGATG 58.751 43.478 0.00 0.00 0.00 2.90
2601 2681 4.249661 GCGAGAGGAGAAAGAAAAGATGT 58.750 43.478 0.00 0.00 0.00 3.06
2602 2682 4.092675 GCGAGAGGAGAAAGAAAAGATGTG 59.907 45.833 0.00 0.00 0.00 3.21
2603 2683 4.629200 CGAGAGGAGAAAGAAAAGATGTGG 59.371 45.833 0.00 0.00 0.00 4.17
2604 2684 5.555966 GAGAGGAGAAAGAAAAGATGTGGT 58.444 41.667 0.00 0.00 0.00 4.16
2605 2685 6.572509 CGAGAGGAGAAAGAAAAGATGTGGTA 60.573 42.308 0.00 0.00 0.00 3.25
2606 2686 6.706295 AGAGGAGAAAGAAAAGATGTGGTAG 58.294 40.000 0.00 0.00 0.00 3.18
2607 2687 6.271159 AGAGGAGAAAGAAAAGATGTGGTAGT 59.729 38.462 0.00 0.00 0.00 2.73
2608 2688 6.234177 AGGAGAAAGAAAAGATGTGGTAGTG 58.766 40.000 0.00 0.00 0.00 2.74
2609 2689 5.106515 GGAGAAAGAAAAGATGTGGTAGTGC 60.107 44.000 0.00 0.00 0.00 4.40
2610 2690 5.625150 AGAAAGAAAAGATGTGGTAGTGCT 58.375 37.500 0.00 0.00 0.00 4.40
2611 2691 6.769512 AGAAAGAAAAGATGTGGTAGTGCTA 58.230 36.000 0.00 0.00 0.00 3.49
2612 2692 7.224297 AGAAAGAAAAGATGTGGTAGTGCTAA 58.776 34.615 0.00 0.00 0.00 3.09
2613 2693 7.885399 AGAAAGAAAAGATGTGGTAGTGCTAAT 59.115 33.333 0.00 0.00 0.00 1.73
2614 2694 8.409358 AAAGAAAAGATGTGGTAGTGCTAATT 57.591 30.769 0.00 0.00 0.00 1.40
2615 2695 8.409358 AAGAAAAGATGTGGTAGTGCTAATTT 57.591 30.769 0.00 0.00 0.00 1.82
2616 2696 8.409358 AGAAAAGATGTGGTAGTGCTAATTTT 57.591 30.769 0.00 0.00 0.00 1.82
2617 2697 8.515414 AGAAAAGATGTGGTAGTGCTAATTTTC 58.485 33.333 0.00 0.00 34.66 2.29
2618 2698 8.409358 AAAAGATGTGGTAGTGCTAATTTTCT 57.591 30.769 0.00 0.00 0.00 2.52
2619 2699 9.515226 AAAAGATGTGGTAGTGCTAATTTTCTA 57.485 29.630 0.00 0.00 0.00 2.10
2620 2700 9.515226 AAAGATGTGGTAGTGCTAATTTTCTAA 57.485 29.630 0.00 0.00 0.00 2.10
2621 2701 8.494016 AGATGTGGTAGTGCTAATTTTCTAAC 57.506 34.615 0.00 0.00 0.00 2.34
2622 2702 8.322091 AGATGTGGTAGTGCTAATTTTCTAACT 58.678 33.333 0.00 0.00 0.00 2.24
2623 2703 7.900782 TGTGGTAGTGCTAATTTTCTAACTC 57.099 36.000 0.00 0.00 0.00 3.01
2624 2704 7.676947 TGTGGTAGTGCTAATTTTCTAACTCT 58.323 34.615 0.00 0.00 0.00 3.24
2625 2705 7.817962 TGTGGTAGTGCTAATTTTCTAACTCTC 59.182 37.037 0.00 0.00 0.00 3.20
2626 2706 8.035984 GTGGTAGTGCTAATTTTCTAACTCTCT 58.964 37.037 0.00 0.00 0.00 3.10
2627 2707 8.594550 TGGTAGTGCTAATTTTCTAACTCTCTT 58.405 33.333 0.00 0.00 0.00 2.85
2631 2711 9.425577 AGTGCTAATTTTCTAACTCTCTTACAC 57.574 33.333 0.00 0.00 0.00 2.90
2632 2712 8.657729 GTGCTAATTTTCTAACTCTCTTACACC 58.342 37.037 0.00 0.00 0.00 4.16
2633 2713 8.372459 TGCTAATTTTCTAACTCTCTTACACCA 58.628 33.333 0.00 0.00 0.00 4.17
2634 2714 9.384764 GCTAATTTTCTAACTCTCTTACACCAT 57.615 33.333 0.00 0.00 0.00 3.55
2636 2716 8.794335 AATTTTCTAACTCTCTTACACCATCC 57.206 34.615 0.00 0.00 0.00 3.51
2637 2717 5.578005 TTCTAACTCTCTTACACCATCCG 57.422 43.478 0.00 0.00 0.00 4.18
2638 2718 4.851843 TCTAACTCTCTTACACCATCCGA 58.148 43.478 0.00 0.00 0.00 4.55
2639 2719 5.446860 TCTAACTCTCTTACACCATCCGAT 58.553 41.667 0.00 0.00 0.00 4.18
2640 2720 6.598503 TCTAACTCTCTTACACCATCCGATA 58.401 40.000 0.00 0.00 0.00 2.92
2641 2721 7.058525 TCTAACTCTCTTACACCATCCGATAA 58.941 38.462 0.00 0.00 0.00 1.75
2642 2722 5.776173 ACTCTCTTACACCATCCGATAAG 57.224 43.478 0.00 0.00 0.00 1.73
2643 2723 5.202004 ACTCTCTTACACCATCCGATAAGT 58.798 41.667 0.00 0.00 0.00 2.24
2644 2724 5.657302 ACTCTCTTACACCATCCGATAAGTT 59.343 40.000 0.00 0.00 0.00 2.66
2645 2725 6.154706 ACTCTCTTACACCATCCGATAAGTTT 59.845 38.462 0.00 0.00 0.00 2.66
2646 2726 6.338146 TCTCTTACACCATCCGATAAGTTTG 58.662 40.000 0.00 0.00 0.00 2.93
2647 2727 6.045072 TCTTACACCATCCGATAAGTTTGT 57.955 37.500 0.00 0.00 0.00 2.83
2648 2728 7.123098 TCTCTTACACCATCCGATAAGTTTGTA 59.877 37.037 0.00 0.00 0.00 2.41
2649 2729 7.788026 TCTTACACCATCCGATAAGTTTGTAT 58.212 34.615 0.00 0.00 0.00 2.29
2650 2730 8.262227 TCTTACACCATCCGATAAGTTTGTATT 58.738 33.333 0.00 0.00 0.00 1.89
2651 2731 9.537192 CTTACACCATCCGATAAGTTTGTATTA 57.463 33.333 0.00 0.00 0.00 0.98
2725 2805 9.092876 TCAAACATTTGATTTTACAAAGTGACC 57.907 29.630 2.89 0.00 41.88 4.02
2726 2806 8.334632 CAAACATTTGATTTTACAAAGTGACCC 58.665 33.333 0.00 0.00 41.87 4.46
2727 2807 6.521162 ACATTTGATTTTACAAAGTGACCCC 58.479 36.000 0.00 0.00 41.87 4.95
2728 2808 6.098982 ACATTTGATTTTACAAAGTGACCCCA 59.901 34.615 0.00 0.00 41.87 4.96
2729 2809 5.523438 TTGATTTTACAAAGTGACCCCAC 57.477 39.130 0.00 0.00 43.50 4.61
2730 2810 4.537751 TGATTTTACAAAGTGACCCCACA 58.462 39.130 0.00 0.00 45.54 4.17
2731 2811 5.144100 TGATTTTACAAAGTGACCCCACAT 58.856 37.500 0.00 0.00 45.54 3.21
2732 2812 4.927978 TTTTACAAAGTGACCCCACATG 57.072 40.909 0.00 0.00 45.54 3.21
2733 2813 3.586470 TTACAAAGTGACCCCACATGT 57.414 42.857 0.00 0.00 45.54 3.21
2734 2814 1.981256 ACAAAGTGACCCCACATGTC 58.019 50.000 0.00 0.00 45.54 3.06
2735 2815 1.214175 ACAAAGTGACCCCACATGTCA 59.786 47.619 0.00 0.00 45.54 3.58
2736 2816 1.881973 CAAAGTGACCCCACATGTCAG 59.118 52.381 0.00 0.00 45.54 3.51
2737 2817 1.434188 AAGTGACCCCACATGTCAGA 58.566 50.000 0.00 0.00 45.54 3.27
2738 2818 1.434188 AGTGACCCCACATGTCAGAA 58.566 50.000 0.00 0.00 45.54 3.02
2739 2819 1.072331 AGTGACCCCACATGTCAGAAC 59.928 52.381 0.00 0.00 45.54 3.01
2740 2820 0.400213 TGACCCCACATGTCAGAACC 59.600 55.000 0.00 0.00 37.80 3.62
2741 2821 0.400213 GACCCCACATGTCAGAACCA 59.600 55.000 0.00 0.00 32.91 3.67
2742 2822 1.004745 GACCCCACATGTCAGAACCAT 59.995 52.381 0.00 0.00 32.91 3.55
2743 2823 1.272092 ACCCCACATGTCAGAACCATG 60.272 52.381 0.00 0.00 44.17 3.66
2748 2828 0.448990 CATGTCAGAACCATGTGGCG 59.551 55.000 0.00 0.00 39.32 5.69
2749 2829 0.036732 ATGTCAGAACCATGTGGCGT 59.963 50.000 0.00 0.00 39.32 5.68
2750 2830 0.179032 TGTCAGAACCATGTGGCGTT 60.179 50.000 0.00 0.00 39.32 4.84
2751 2831 0.951558 GTCAGAACCATGTGGCGTTT 59.048 50.000 0.00 0.00 39.32 3.60
2752 2832 1.069227 GTCAGAACCATGTGGCGTTTC 60.069 52.381 0.00 0.00 39.32 2.78
2753 2833 1.202758 TCAGAACCATGTGGCGTTTCT 60.203 47.619 0.00 0.00 39.32 2.52
2754 2834 1.608590 CAGAACCATGTGGCGTTTCTT 59.391 47.619 0.00 0.00 39.32 2.52
2755 2835 2.034558 CAGAACCATGTGGCGTTTCTTT 59.965 45.455 0.00 0.00 39.32 2.52
2756 2836 2.693074 AGAACCATGTGGCGTTTCTTTT 59.307 40.909 0.00 0.00 39.32 2.27
2757 2837 2.507339 ACCATGTGGCGTTTCTTTTG 57.493 45.000 0.00 0.00 39.32 2.44
2758 2838 1.139163 CCATGTGGCGTTTCTTTTGC 58.861 50.000 0.00 0.00 0.00 3.68
2759 2839 0.777631 CATGTGGCGTTTCTTTTGCG 59.222 50.000 0.00 0.00 0.00 4.85
2760 2840 0.318614 ATGTGGCGTTTCTTTTGCGG 60.319 50.000 0.00 0.00 0.00 5.69
2761 2841 1.660264 GTGGCGTTTCTTTTGCGGG 60.660 57.895 0.00 0.00 0.00 6.13
2762 2842 2.733218 GGCGTTTCTTTTGCGGGC 60.733 61.111 0.00 0.00 0.00 6.13
2763 2843 3.097114 GCGTTTCTTTTGCGGGCG 61.097 61.111 0.00 0.00 0.00 6.13
2764 2844 2.634777 CGTTTCTTTTGCGGGCGA 59.365 55.556 0.00 0.00 0.00 5.54
2765 2845 1.009449 CGTTTCTTTTGCGGGCGAA 60.009 52.632 0.00 0.00 0.00 4.70
2766 2846 1.266124 CGTTTCTTTTGCGGGCGAAC 61.266 55.000 0.00 0.00 0.00 3.95
2767 2847 0.030235 GTTTCTTTTGCGGGCGAACT 59.970 50.000 0.00 0.00 0.00 3.01
2768 2848 0.741915 TTTCTTTTGCGGGCGAACTT 59.258 45.000 0.00 0.00 0.00 2.66
2769 2849 0.741915 TTCTTTTGCGGGCGAACTTT 59.258 45.000 0.00 0.00 0.00 2.66
2770 2850 0.030101 TCTTTTGCGGGCGAACTTTG 59.970 50.000 0.00 0.00 0.00 2.77
2771 2851 0.248866 CTTTTGCGGGCGAACTTTGT 60.249 50.000 0.00 0.00 0.00 2.83
2772 2852 1.002251 CTTTTGCGGGCGAACTTTGTA 60.002 47.619 0.00 0.00 0.00 2.41
2773 2853 1.240256 TTTGCGGGCGAACTTTGTAT 58.760 45.000 0.00 0.00 0.00 2.29
2774 2854 1.240256 TTGCGGGCGAACTTTGTATT 58.760 45.000 0.00 0.00 0.00 1.89
2775 2855 2.096220 TGCGGGCGAACTTTGTATTA 57.904 45.000 0.00 0.00 0.00 0.98
2776 2856 1.733360 TGCGGGCGAACTTTGTATTAC 59.267 47.619 0.00 0.00 0.00 1.89
2777 2857 2.004733 GCGGGCGAACTTTGTATTACT 58.995 47.619 0.00 0.00 0.00 2.24
2778 2858 2.417586 GCGGGCGAACTTTGTATTACTT 59.582 45.455 0.00 0.00 0.00 2.24
2779 2859 3.726782 GCGGGCGAACTTTGTATTACTTG 60.727 47.826 0.00 0.00 0.00 3.16
2780 2860 3.434299 CGGGCGAACTTTGTATTACTTGT 59.566 43.478 0.00 0.00 0.00 3.16
2781 2861 4.083696 CGGGCGAACTTTGTATTACTTGTT 60.084 41.667 0.00 0.00 0.00 2.83
2782 2862 5.151389 GGGCGAACTTTGTATTACTTGTTG 58.849 41.667 0.00 0.00 0.00 3.33
2783 2863 5.151389 GGCGAACTTTGTATTACTTGTTGG 58.849 41.667 0.00 1.54 0.00 3.77
2784 2864 5.049267 GGCGAACTTTGTATTACTTGTTGGA 60.049 40.000 0.00 0.00 0.00 3.53
2785 2865 6.077838 GCGAACTTTGTATTACTTGTTGGAG 58.922 40.000 0.00 0.00 0.00 3.86
2786 2866 6.073440 GCGAACTTTGTATTACTTGTTGGAGA 60.073 38.462 0.00 0.00 0.00 3.71
2787 2867 7.519328 GCGAACTTTGTATTACTTGTTGGAGAA 60.519 37.037 0.00 0.00 0.00 2.87
2788 2868 7.797123 CGAACTTTGTATTACTTGTTGGAGAAC 59.203 37.037 0.00 0.00 0.00 3.01
2789 2869 7.186021 ACTTTGTATTACTTGTTGGAGAACG 57.814 36.000 0.00 0.00 34.49 3.95
2790 2870 6.764560 ACTTTGTATTACTTGTTGGAGAACGT 59.235 34.615 0.00 0.00 34.49 3.99
2791 2871 7.927629 ACTTTGTATTACTTGTTGGAGAACGTA 59.072 33.333 0.00 0.00 34.49 3.57
2792 2872 7.878477 TTGTATTACTTGTTGGAGAACGTAG 57.122 36.000 0.00 0.00 34.49 3.51
2793 2873 5.865552 TGTATTACTTGTTGGAGAACGTAGC 59.134 40.000 0.00 0.00 34.49 3.58
2794 2874 2.902705 ACTTGTTGGAGAACGTAGCA 57.097 45.000 0.00 0.00 34.49 3.49
2795 2875 2.755650 ACTTGTTGGAGAACGTAGCAG 58.244 47.619 0.00 0.00 34.49 4.24
2796 2876 2.364324 ACTTGTTGGAGAACGTAGCAGA 59.636 45.455 0.00 0.00 34.49 4.26
2797 2877 3.181469 ACTTGTTGGAGAACGTAGCAGAA 60.181 43.478 0.00 0.00 34.49 3.02
2798 2878 3.462483 TGTTGGAGAACGTAGCAGAAA 57.538 42.857 0.00 0.00 34.49 2.52
2799 2879 4.002906 TGTTGGAGAACGTAGCAGAAAT 57.997 40.909 0.00 0.00 34.49 2.17
2800 2880 4.385825 TGTTGGAGAACGTAGCAGAAATT 58.614 39.130 0.00 0.00 34.49 1.82
2801 2881 4.451096 TGTTGGAGAACGTAGCAGAAATTC 59.549 41.667 0.00 0.00 34.49 2.17
2802 2882 4.265904 TGGAGAACGTAGCAGAAATTCA 57.734 40.909 0.00 0.00 0.00 2.57
2803 2883 4.637276 TGGAGAACGTAGCAGAAATTCAA 58.363 39.130 0.00 0.00 0.00 2.69
2804 2884 5.060506 TGGAGAACGTAGCAGAAATTCAAA 58.939 37.500 0.00 0.00 0.00 2.69
2805 2885 5.529430 TGGAGAACGTAGCAGAAATTCAAAA 59.471 36.000 0.00 0.00 0.00 2.44
2806 2886 6.206634 TGGAGAACGTAGCAGAAATTCAAAAT 59.793 34.615 0.00 0.00 0.00 1.82
2807 2887 7.084486 GGAGAACGTAGCAGAAATTCAAAATT 58.916 34.615 0.00 0.00 0.00 1.82
2808 2888 7.595130 GGAGAACGTAGCAGAAATTCAAAATTT 59.405 33.333 0.00 0.00 0.00 1.82
2809 2889 8.871686 AGAACGTAGCAGAAATTCAAAATTTT 57.128 26.923 0.00 0.00 0.00 1.82
2810 2890 8.968242 AGAACGTAGCAGAAATTCAAAATTTTC 58.032 29.630 0.00 0.00 33.08 2.29
2811 2891 8.871686 AACGTAGCAGAAATTCAAAATTTTCT 57.128 26.923 0.00 0.00 41.61 2.52
2812 2892 9.959749 AACGTAGCAGAAATTCAAAATTTTCTA 57.040 25.926 0.00 0.00 39.53 2.10
2813 2893 9.394477 ACGTAGCAGAAATTCAAAATTTTCTAC 57.606 29.630 0.00 5.68 39.53 2.59
2814 2894 8.567221 CGTAGCAGAAATTCAAAATTTTCTACG 58.433 33.333 19.51 19.51 39.53 3.51
2815 2895 7.338440 AGCAGAAATTCAAAATTTTCTACGC 57.662 32.000 0.00 0.00 39.53 4.42
2816 2896 6.922957 AGCAGAAATTCAAAATTTTCTACGCA 59.077 30.769 0.00 0.00 39.53 5.24
2817 2897 7.437862 AGCAGAAATTCAAAATTTTCTACGCAA 59.562 29.630 0.00 0.00 39.53 4.85
2818 2898 7.527183 GCAGAAATTCAAAATTTTCTACGCAAC 59.473 33.333 0.00 0.00 39.53 4.17
2819 2899 8.538856 CAGAAATTCAAAATTTTCTACGCAACA 58.461 29.630 0.00 0.00 39.53 3.33
2820 2900 8.539674 AGAAATTCAAAATTTTCTACGCAACAC 58.460 29.630 0.00 0.00 39.70 3.32
2821 2901 6.763303 ATTCAAAATTTTCTACGCAACACC 57.237 33.333 0.00 0.00 0.00 4.16
2822 2902 5.250235 TCAAAATTTTCTACGCAACACCA 57.750 34.783 0.00 0.00 0.00 4.17
2823 2903 5.651530 TCAAAATTTTCTACGCAACACCAA 58.348 33.333 0.00 0.00 0.00 3.67
2824 2904 5.746245 TCAAAATTTTCTACGCAACACCAAG 59.254 36.000 0.00 0.00 0.00 3.61
2825 2905 5.508200 AAATTTTCTACGCAACACCAAGA 57.492 34.783 0.00 0.00 0.00 3.02
2826 2906 5.705609 AATTTTCTACGCAACACCAAGAT 57.294 34.783 0.00 0.00 0.00 2.40
2827 2907 4.742438 TTTTCTACGCAACACCAAGATC 57.258 40.909 0.00 0.00 0.00 2.75
2828 2908 3.394674 TTCTACGCAACACCAAGATCA 57.605 42.857 0.00 0.00 0.00 2.92
2829 2909 3.394674 TCTACGCAACACCAAGATCAA 57.605 42.857 0.00 0.00 0.00 2.57
2830 2910 3.937814 TCTACGCAACACCAAGATCAAT 58.062 40.909 0.00 0.00 0.00 2.57
2831 2911 3.932710 TCTACGCAACACCAAGATCAATC 59.067 43.478 0.00 0.00 0.00 2.67
2832 2912 2.783135 ACGCAACACCAAGATCAATCT 58.217 42.857 0.00 0.00 39.22 2.40
2833 2913 3.937814 ACGCAACACCAAGATCAATCTA 58.062 40.909 0.00 0.00 35.76 1.98
2834 2914 4.517285 ACGCAACACCAAGATCAATCTAT 58.483 39.130 0.00 0.00 35.76 1.98
2835 2915 4.333649 ACGCAACACCAAGATCAATCTATG 59.666 41.667 0.00 0.00 35.76 2.23
2836 2916 4.260907 CGCAACACCAAGATCAATCTATGG 60.261 45.833 14.46 14.46 39.18 2.74
2837 2917 4.883585 GCAACACCAAGATCAATCTATGGA 59.116 41.667 19.34 0.00 37.92 3.41
2838 2918 5.008415 GCAACACCAAGATCAATCTATGGAG 59.992 44.000 19.34 15.82 37.92 3.86
2839 2919 6.351711 CAACACCAAGATCAATCTATGGAGA 58.648 40.000 19.34 0.00 37.92 3.71
2840 2920 6.760440 ACACCAAGATCAATCTATGGAGAT 57.240 37.500 19.34 8.27 44.79 2.75
2853 2933 7.609097 ATCTATGGAGATTCTAGCAACAAGA 57.391 36.000 0.00 0.00 39.56 3.02
2854 2934 7.048629 TCTATGGAGATTCTAGCAACAAGAG 57.951 40.000 0.00 0.00 0.00 2.85
2855 2935 5.946942 ATGGAGATTCTAGCAACAAGAGA 57.053 39.130 0.00 0.00 0.00 3.10
2856 2936 5.336150 TGGAGATTCTAGCAACAAGAGAG 57.664 43.478 0.00 0.00 0.00 3.20
2857 2937 4.161189 TGGAGATTCTAGCAACAAGAGAGG 59.839 45.833 0.00 0.00 0.00 3.69
2858 2938 4.442753 GGAGATTCTAGCAACAAGAGAGGG 60.443 50.000 0.00 0.00 0.00 4.30
2859 2939 4.357325 AGATTCTAGCAACAAGAGAGGGA 58.643 43.478 0.00 0.00 0.00 4.20
2860 2940 4.405358 AGATTCTAGCAACAAGAGAGGGAG 59.595 45.833 0.00 0.00 0.00 4.30
2861 2941 3.458044 TCTAGCAACAAGAGAGGGAGA 57.542 47.619 0.00 0.00 0.00 3.71
2862 2942 3.360867 TCTAGCAACAAGAGAGGGAGAG 58.639 50.000 0.00 0.00 0.00 3.20
2863 2943 1.274712 AGCAACAAGAGAGGGAGAGG 58.725 55.000 0.00 0.00 0.00 3.69
2864 2944 1.203237 AGCAACAAGAGAGGGAGAGGA 60.203 52.381 0.00 0.00 0.00 3.71
2865 2945 1.836802 GCAACAAGAGAGGGAGAGGAT 59.163 52.381 0.00 0.00 0.00 3.24
2866 2946 2.419851 GCAACAAGAGAGGGAGAGGATG 60.420 54.545 0.00 0.00 0.00 3.51
2867 2947 3.102972 CAACAAGAGAGGGAGAGGATGA 58.897 50.000 0.00 0.00 0.00 2.92
2868 2948 3.030873 ACAAGAGAGGGAGAGGATGAG 57.969 52.381 0.00 0.00 0.00 2.90
2869 2949 1.688197 CAAGAGAGGGAGAGGATGAGC 59.312 57.143 0.00 0.00 0.00 4.26
2870 2950 0.932955 AGAGAGGGAGAGGATGAGCA 59.067 55.000 0.00 0.00 0.00 4.26
2871 2951 1.504660 AGAGAGGGAGAGGATGAGCAT 59.495 52.381 0.00 0.00 0.00 3.79
2872 2952 1.895131 GAGAGGGAGAGGATGAGCATC 59.105 57.143 1.86 1.86 37.11 3.91
2873 2953 1.504660 AGAGGGAGAGGATGAGCATCT 59.495 52.381 10.04 0.00 41.01 2.90
2874 2954 2.090606 AGAGGGAGAGGATGAGCATCTT 60.091 50.000 10.04 2.67 37.85 2.40
2875 2955 2.299867 GAGGGAGAGGATGAGCATCTTC 59.700 54.545 12.97 12.97 42.28 2.87
2876 2956 2.045524 GGGAGAGGATGAGCATCTTCA 58.954 52.381 20.22 0.00 43.78 3.02
2877 2957 2.638855 GGGAGAGGATGAGCATCTTCAT 59.361 50.000 20.22 8.91 43.78 2.57
2878 2958 3.837146 GGGAGAGGATGAGCATCTTCATA 59.163 47.826 20.22 0.00 43.78 2.15
2879 2959 4.322650 GGGAGAGGATGAGCATCTTCATAC 60.323 50.000 20.22 12.58 43.78 2.39
2880 2960 4.322650 GGAGAGGATGAGCATCTTCATACC 60.323 50.000 20.22 16.23 43.78 2.73
2881 2961 3.582208 AGAGGATGAGCATCTTCATACCC 59.418 47.826 20.22 0.17 43.78 3.69
2882 2962 3.582208 GAGGATGAGCATCTTCATACCCT 59.418 47.826 15.20 1.22 41.77 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.814010 CTTATTTCCCGCCCCGTGAG 60.814 60.000 0.00 0.00 0.00 3.51
3 4 1.222387 CTTATTTCCCGCCCCGTGA 59.778 57.895 0.00 0.00 0.00 4.35
6 7 0.736636 GAAACTTATTTCCCGCCCCG 59.263 55.000 0.00 0.00 38.67 5.73
7 8 1.842052 TGAAACTTATTTCCCGCCCC 58.158 50.000 0.00 0.00 43.18 5.80
8 9 3.949113 TGTATGAAACTTATTTCCCGCCC 59.051 43.478 0.00 0.00 43.18 6.13
9 10 4.201980 GGTGTATGAAACTTATTTCCCGCC 60.202 45.833 0.00 0.00 43.18 6.13
10 11 4.396790 TGGTGTATGAAACTTATTTCCCGC 59.603 41.667 0.00 0.00 43.18 6.13
11 12 6.503589 TTGGTGTATGAAACTTATTTCCCG 57.496 37.500 0.00 0.00 43.18 5.14
20 21 9.436957 CACTTCTACTTATTGGTGTATGAAACT 57.563 33.333 0.00 0.00 0.00 2.66
21 22 9.216117 ACACTTCTACTTATTGGTGTATGAAAC 57.784 33.333 0.00 0.00 36.37 2.78
24 25 9.470399 TCTACACTTCTACTTATTGGTGTATGA 57.530 33.333 0.00 0.00 38.75 2.15
27 28 8.526147 GGTTCTACACTTCTACTTATTGGTGTA 58.474 37.037 0.00 0.00 38.56 2.90
28 29 7.015877 TGGTTCTACACTTCTACTTATTGGTGT 59.984 37.037 0.00 0.00 40.34 4.16
29 30 7.383687 TGGTTCTACACTTCTACTTATTGGTG 58.616 38.462 0.00 0.00 0.00 4.17
30 31 7.549147 TGGTTCTACACTTCTACTTATTGGT 57.451 36.000 0.00 0.00 0.00 3.67
35 36 8.248945 GCACTTATGGTTCTACACTTCTACTTA 58.751 37.037 0.00 0.00 0.00 2.24
36 37 7.097834 GCACTTATGGTTCTACACTTCTACTT 58.902 38.462 0.00 0.00 0.00 2.24
37 38 6.210784 TGCACTTATGGTTCTACACTTCTACT 59.789 38.462 0.00 0.00 0.00 2.57
38 39 6.395629 TGCACTTATGGTTCTACACTTCTAC 58.604 40.000 0.00 0.00 0.00 2.59
39 40 6.599356 TGCACTTATGGTTCTACACTTCTA 57.401 37.500 0.00 0.00 0.00 2.10
40 41 5.483685 TGCACTTATGGTTCTACACTTCT 57.516 39.130 0.00 0.00 0.00 2.85
41 42 5.065218 CCATGCACTTATGGTTCTACACTTC 59.935 44.000 0.00 0.00 42.16 3.01
42 43 4.943705 CCATGCACTTATGGTTCTACACTT 59.056 41.667 0.00 0.00 42.16 3.16
43 44 4.225042 TCCATGCACTTATGGTTCTACACT 59.775 41.667 4.04 0.00 46.23 3.55
44 45 4.513442 TCCATGCACTTATGGTTCTACAC 58.487 43.478 4.04 0.00 46.23 2.90
45 46 4.384098 CCTCCATGCACTTATGGTTCTACA 60.384 45.833 4.04 0.00 46.23 2.74
46 47 4.130118 CCTCCATGCACTTATGGTTCTAC 58.870 47.826 4.04 0.00 46.23 2.59
47 48 4.037222 TCCTCCATGCACTTATGGTTCTA 58.963 43.478 4.04 0.00 46.23 2.10
48 49 2.846206 TCCTCCATGCACTTATGGTTCT 59.154 45.455 4.04 0.00 46.23 3.01
49 50 3.209410 CTCCTCCATGCACTTATGGTTC 58.791 50.000 4.04 0.00 46.23 3.62
50 51 2.092212 CCTCCTCCATGCACTTATGGTT 60.092 50.000 4.04 0.00 46.23 3.67
51 52 1.492176 CCTCCTCCATGCACTTATGGT 59.508 52.381 4.04 0.00 46.23 3.55
53 54 2.947652 CAACCTCCTCCATGCACTTATG 59.052 50.000 0.00 0.00 0.00 1.90
54 55 2.092212 CCAACCTCCTCCATGCACTTAT 60.092 50.000 0.00 0.00 0.00 1.73
55 56 1.281867 CCAACCTCCTCCATGCACTTA 59.718 52.381 0.00 0.00 0.00 2.24
56 57 0.038744 CCAACCTCCTCCATGCACTT 59.961 55.000 0.00 0.00 0.00 3.16
57 58 1.687612 CCAACCTCCTCCATGCACT 59.312 57.895 0.00 0.00 0.00 4.40
58 59 1.379044 CCCAACCTCCTCCATGCAC 60.379 63.158 0.00 0.00 0.00 4.57
59 60 3.089838 CCCAACCTCCTCCATGCA 58.910 61.111 0.00 0.00 0.00 3.96
60 61 2.440980 GCCCAACCTCCTCCATGC 60.441 66.667 0.00 0.00 0.00 4.06
61 62 0.032813 ATTGCCCAACCTCCTCCATG 60.033 55.000 0.00 0.00 0.00 3.66
62 63 0.259938 GATTGCCCAACCTCCTCCAT 59.740 55.000 0.00 0.00 0.00 3.41
63 64 1.691219 GATTGCCCAACCTCCTCCA 59.309 57.895 0.00 0.00 0.00 3.86
64 65 1.076705 GGATTGCCCAACCTCCTCC 60.077 63.158 0.00 0.00 34.14 4.30
65 66 1.691219 TGGATTGCCCAACCTCCTC 59.309 57.895 3.20 0.00 43.29 3.71
66 67 3.936408 TGGATTGCCCAACCTCCT 58.064 55.556 3.20 0.00 43.29 3.69
75 76 3.667429 GAAGCGTGCGTGGATTGCC 62.667 63.158 0.00 0.00 0.00 4.52
76 77 2.202349 GAAGCGTGCGTGGATTGC 60.202 61.111 0.00 0.00 0.00 3.56
77 78 0.725784 GTTGAAGCGTGCGTGGATTG 60.726 55.000 0.00 0.00 0.00 2.67
78 79 1.574428 GTTGAAGCGTGCGTGGATT 59.426 52.632 0.00 0.00 0.00 3.01
79 80 2.667318 CGTTGAAGCGTGCGTGGAT 61.667 57.895 0.00 0.00 0.00 3.41
80 81 3.334751 CGTTGAAGCGTGCGTGGA 61.335 61.111 0.00 0.00 0.00 4.02
81 82 4.368808 CCGTTGAAGCGTGCGTGG 62.369 66.667 0.00 0.00 0.00 4.94
82 83 1.623081 ATACCGTTGAAGCGTGCGTG 61.623 55.000 0.00 0.00 0.00 5.34
83 84 1.373748 ATACCGTTGAAGCGTGCGT 60.374 52.632 0.00 0.00 0.00 5.24
84 85 1.058748 CATACCGTTGAAGCGTGCG 59.941 57.895 0.00 0.00 0.00 5.34
85 86 1.226018 GCATACCGTTGAAGCGTGC 60.226 57.895 0.00 0.00 0.00 5.34
86 87 0.796312 AAGCATACCGTTGAAGCGTG 59.204 50.000 0.00 0.00 0.00 5.34
87 88 0.796312 CAAGCATACCGTTGAAGCGT 59.204 50.000 0.00 0.00 0.00 5.07
88 89 0.796312 ACAAGCATACCGTTGAAGCG 59.204 50.000 0.00 0.00 0.00 4.68
89 90 1.535462 ACACAAGCATACCGTTGAAGC 59.465 47.619 0.00 0.00 0.00 3.86
90 91 4.391830 ACATACACAAGCATACCGTTGAAG 59.608 41.667 0.00 0.00 0.00 3.02
91 92 4.153296 CACATACACAAGCATACCGTTGAA 59.847 41.667 0.00 0.00 0.00 2.69
92 93 3.682377 CACATACACAAGCATACCGTTGA 59.318 43.478 0.00 0.00 0.00 3.18
93 94 3.181511 CCACATACACAAGCATACCGTTG 60.182 47.826 0.00 0.00 0.00 4.10
131 132 4.349871 GAACCACGCGCACACGTC 62.350 66.667 5.73 0.00 46.34 4.34
149 150 2.017049 CGATGGAATGGAAGGTGAACC 58.983 52.381 0.00 0.00 0.00 3.62
162 163 3.762407 TTCACTTGTTCTCCGATGGAA 57.238 42.857 0.00 0.00 0.00 3.53
165 166 6.148480 AGAGATTTTTCACTTGTTCTCCGATG 59.852 38.462 0.00 0.00 32.00 3.84
168 169 5.931441 AGAGATTTTTCACTTGTTCTCCG 57.069 39.130 0.00 0.00 32.00 4.63
175 176 6.414987 GTCGACCAAAAGAGATTTTTCACTTG 59.585 38.462 3.51 0.00 0.00 3.16
178 179 5.212934 GGTCGACCAAAAGAGATTTTTCAC 58.787 41.667 29.75 0.00 35.64 3.18
179 180 4.024387 CGGTCGACCAAAAGAGATTTTTCA 60.024 41.667 32.80 0.00 35.14 2.69
180 181 4.464112 CGGTCGACCAAAAGAGATTTTTC 58.536 43.478 32.80 1.38 35.14 2.29
182 183 2.812011 CCGGTCGACCAAAAGAGATTTT 59.188 45.455 32.80 0.00 35.14 1.82
186 187 1.117142 ACCCGGTCGACCAAAAGAGA 61.117 55.000 32.80 0.00 35.14 3.10
187 188 0.669625 GACCCGGTCGACCAAAAGAG 60.670 60.000 32.80 15.90 35.14 2.85
188 189 1.117142 AGACCCGGTCGACCAAAAGA 61.117 55.000 32.80 0.00 37.67 2.52
191 192 2.576832 GGAGACCCGGTCGACCAAA 61.577 63.158 32.80 0.00 37.67 3.28
196 198 4.790962 CGGAGGAGACCCGGTCGA 62.791 72.222 12.04 0.00 43.05 4.20
245 248 2.202623 GACGTGCGAGCTAGGGTG 60.203 66.667 0.00 0.00 0.00 4.61
246 249 2.214181 CTTGACGTGCGAGCTAGGGT 62.214 60.000 0.00 0.00 0.00 4.34
248 251 4.079090 CTTGACGTGCGAGCTAGG 57.921 61.111 0.00 0.00 0.00 3.02
546 560 8.248253 TCGTATGCTAGTACCATATGTAATTGG 58.752 37.037 1.24 0.00 39.02 3.16
566 580 5.142265 GCAAATCTGTATGTGCATCGTATG 58.858 41.667 0.00 0.00 44.57 2.39
571 585 3.181507 ACACGCAAATCTGTATGTGCATC 60.182 43.478 0.00 0.00 45.34 3.91
583 597 5.685511 ACTAACACATTTTCACACGCAAATC 59.314 36.000 0.00 0.00 0.00 2.17
686 705 4.152223 GCAATTACATGAAGTTTTGTGCCC 59.848 41.667 0.00 0.00 0.00 5.36
696 715 8.531622 TTTATGTTTGGTGCAATTACATGAAG 57.468 30.769 0.00 0.00 30.59 3.02
717 736 5.237779 CACGGTGTTACAGACAAACCTTTAT 59.762 40.000 0.00 0.00 40.65 1.40
723 742 2.674357 ACACACGGTGTTACAGACAAAC 59.326 45.455 11.82 0.00 45.08 2.93
729 748 5.905181 GTGAAAAATACACACGGTGTTACAG 59.095 40.000 11.82 2.78 45.08 2.74
732 751 7.966246 ATAGTGAAAAATACACACGGTGTTA 57.034 32.000 11.82 8.15 45.08 2.41
774 793 7.209475 TGACTAAAGAAAATTCCCAGCTTTTG 58.791 34.615 0.00 0.00 31.85 2.44
779 798 5.654497 CCATGACTAAAGAAAATTCCCAGC 58.346 41.667 0.00 0.00 0.00 4.85
780 799 5.654497 GCCATGACTAAAGAAAATTCCCAG 58.346 41.667 0.00 0.00 0.00 4.45
1092 1118 4.147449 CAGGAGCACCCGCGATGA 62.147 66.667 8.23 0.00 45.49 2.92
1099 1125 1.021390 CACGATCAACAGGAGCACCC 61.021 60.000 0.00 0.00 36.73 4.61
1467 1493 4.147449 CACGAGCATCTGGCCGGA 62.147 66.667 18.80 18.80 46.50 5.14
1821 1875 6.584185 AACAGTGAACAACTTTAGGTGTTT 57.416 33.333 13.90 0.00 36.83 2.83
1822 1876 6.207810 TGAAACAGTGAACAACTTTAGGTGTT 59.792 34.615 12.70 12.70 36.83 3.32
1922 1976 1.987855 CCCCCGTCAGCAAGAGGTA 60.988 63.158 0.00 0.00 0.00 3.08
1933 1987 2.172082 ACCTCTAAAAATAGCCCCCGTC 59.828 50.000 0.00 0.00 0.00 4.79
1934 1988 2.172082 GACCTCTAAAAATAGCCCCCGT 59.828 50.000 0.00 0.00 0.00 5.28
1935 1989 2.438392 AGACCTCTAAAAATAGCCCCCG 59.562 50.000 0.00 0.00 0.00 5.73
1936 1990 3.458487 TCAGACCTCTAAAAATAGCCCCC 59.542 47.826 0.00 0.00 0.00 5.40
1937 1991 4.772886 TCAGACCTCTAAAAATAGCCCC 57.227 45.455 0.00 0.00 0.00 5.80
1938 1992 6.181190 ACTTTCAGACCTCTAAAAATAGCCC 58.819 40.000 0.00 0.00 0.00 5.19
1939 1993 7.822822 TGTACTTTCAGACCTCTAAAAATAGCC 59.177 37.037 0.00 0.00 0.00 3.93
1940 1994 8.773404 TGTACTTTCAGACCTCTAAAAATAGC 57.227 34.615 0.00 0.00 0.00 2.97
1942 1996 9.720769 CCTTGTACTTTCAGACCTCTAAAAATA 57.279 33.333 0.00 0.00 0.00 1.40
1943 1997 8.437575 TCCTTGTACTTTCAGACCTCTAAAAAT 58.562 33.333 0.00 0.00 0.00 1.82
1944 1998 7.713942 GTCCTTGTACTTTCAGACCTCTAAAAA 59.286 37.037 0.00 0.00 0.00 1.94
1945 1999 7.070821 AGTCCTTGTACTTTCAGACCTCTAAAA 59.929 37.037 0.00 0.00 0.00 1.52
1946 2000 6.553852 AGTCCTTGTACTTTCAGACCTCTAAA 59.446 38.462 0.00 0.00 0.00 1.85
1947 2001 6.075984 AGTCCTTGTACTTTCAGACCTCTAA 58.924 40.000 0.00 0.00 0.00 2.10
1948 2002 5.642165 AGTCCTTGTACTTTCAGACCTCTA 58.358 41.667 0.00 0.00 0.00 2.43
1949 2003 4.484912 AGTCCTTGTACTTTCAGACCTCT 58.515 43.478 0.00 0.00 0.00 3.69
1950 2004 4.875561 AGTCCTTGTACTTTCAGACCTC 57.124 45.455 0.00 0.00 0.00 3.85
1951 2005 5.632034 AAAGTCCTTGTACTTTCAGACCT 57.368 39.130 0.00 0.00 44.43 3.85
1952 2006 6.056236 AGAAAAGTCCTTGTACTTTCAGACC 58.944 40.000 2.73 0.00 46.40 3.85
1953 2007 7.555306 AAGAAAAGTCCTTGTACTTTCAGAC 57.445 36.000 2.73 0.00 46.40 3.51
1954 2008 8.575649 AAAAGAAAAGTCCTTGTACTTTCAGA 57.424 30.769 2.73 0.00 46.40 3.27
1955 2009 9.076596 CAAAAAGAAAAGTCCTTGTACTTTCAG 57.923 33.333 2.73 0.00 46.40 3.02
1956 2010 7.544217 GCAAAAAGAAAAGTCCTTGTACTTTCA 59.456 33.333 2.73 0.00 46.40 2.69
1957 2011 7.544217 TGCAAAAAGAAAAGTCCTTGTACTTTC 59.456 33.333 2.73 0.00 46.40 2.62
1959 2013 6.930731 TGCAAAAAGAAAAGTCCTTGTACTT 58.069 32.000 0.00 0.00 41.46 2.24
1960 2014 6.524101 TGCAAAAAGAAAAGTCCTTGTACT 57.476 33.333 0.00 0.00 0.00 2.73
1961 2015 7.589574 TTTGCAAAAAGAAAAGTCCTTGTAC 57.410 32.000 10.02 0.00 0.00 2.90
1962 2016 9.308318 GTATTTGCAAAAAGAAAAGTCCTTGTA 57.692 29.630 17.19 0.00 0.00 2.41
1963 2017 7.010091 CGTATTTGCAAAAAGAAAAGTCCTTGT 59.990 33.333 17.19 0.00 0.00 3.16
1964 2018 7.221838 TCGTATTTGCAAAAAGAAAAGTCCTTG 59.778 33.333 17.19 0.00 0.00 3.61
1965 2019 7.262048 TCGTATTTGCAAAAAGAAAAGTCCTT 58.738 30.769 17.19 0.00 0.00 3.36
1966 2020 6.801575 TCGTATTTGCAAAAAGAAAAGTCCT 58.198 32.000 17.19 0.00 0.00 3.85
1967 2021 6.143919 CCTCGTATTTGCAAAAAGAAAAGTCC 59.856 38.462 17.19 0.00 0.00 3.85
1968 2022 6.695713 ACCTCGTATTTGCAAAAAGAAAAGTC 59.304 34.615 17.19 0.00 0.00 3.01
1969 2023 6.475402 CACCTCGTATTTGCAAAAAGAAAAGT 59.525 34.615 17.19 6.12 0.00 2.66
1970 2024 6.475402 ACACCTCGTATTTGCAAAAAGAAAAG 59.525 34.615 17.19 8.94 0.00 2.27
1971 2025 6.334202 ACACCTCGTATTTGCAAAAAGAAAA 58.666 32.000 17.19 0.00 0.00 2.29
1972 2026 5.897050 ACACCTCGTATTTGCAAAAAGAAA 58.103 33.333 17.19 0.45 0.00 2.52
1973 2027 5.508200 ACACCTCGTATTTGCAAAAAGAA 57.492 34.783 17.19 1.90 0.00 2.52
1974 2028 5.761234 ACTACACCTCGTATTTGCAAAAAGA 59.239 36.000 17.19 14.01 0.00 2.52
1975 2029 5.851177 CACTACACCTCGTATTTGCAAAAAG 59.149 40.000 17.19 10.45 0.00 2.27
1976 2030 5.753744 CACTACACCTCGTATTTGCAAAAA 58.246 37.500 17.19 0.00 0.00 1.94
1977 2031 4.319911 GCACTACACCTCGTATTTGCAAAA 60.320 41.667 17.19 2.96 38.23 2.44
1978 2032 3.187637 GCACTACACCTCGTATTTGCAAA 59.812 43.478 15.44 15.44 38.23 3.68
1979 2033 2.739913 GCACTACACCTCGTATTTGCAA 59.260 45.455 0.00 0.00 38.23 4.08
1980 2034 2.343101 GCACTACACCTCGTATTTGCA 58.657 47.619 0.00 0.00 38.23 4.08
1981 2035 1.323534 CGCACTACACCTCGTATTTGC 59.676 52.381 0.00 0.00 36.38 3.68
1982 2036 2.852413 CTCGCACTACACCTCGTATTTG 59.148 50.000 0.00 0.00 0.00 2.32
1983 2037 2.734492 GCTCGCACTACACCTCGTATTT 60.734 50.000 0.00 0.00 0.00 1.40
1984 2038 1.202268 GCTCGCACTACACCTCGTATT 60.202 52.381 0.00 0.00 0.00 1.89
1985 2039 0.381089 GCTCGCACTACACCTCGTAT 59.619 55.000 0.00 0.00 0.00 3.06
1986 2040 1.798735 GCTCGCACTACACCTCGTA 59.201 57.895 0.00 0.00 0.00 3.43
1987 2041 2.567049 GCTCGCACTACACCTCGT 59.433 61.111 0.00 0.00 0.00 4.18
1988 2042 2.577112 CGCTCGCACTACACCTCG 60.577 66.667 0.00 0.00 0.00 4.63
1989 2043 1.226435 CTCGCTCGCACTACACCTC 60.226 63.158 0.00 0.00 0.00 3.85
1990 2044 1.924320 GACTCGCTCGCACTACACCT 61.924 60.000 0.00 0.00 0.00 4.00
1991 2045 1.514443 GACTCGCTCGCACTACACC 60.514 63.158 0.00 0.00 0.00 4.16
1992 2046 0.386858 TTGACTCGCTCGCACTACAC 60.387 55.000 0.00 0.00 0.00 2.90
1993 2047 0.109735 CTTGACTCGCTCGCACTACA 60.110 55.000 0.00 0.00 0.00 2.74
1994 2048 1.406970 GCTTGACTCGCTCGCACTAC 61.407 60.000 0.00 0.00 0.00 2.73
1995 2049 1.154016 GCTTGACTCGCTCGCACTA 60.154 57.895 0.00 0.00 0.00 2.74
1996 2050 2.431601 GCTTGACTCGCTCGCACT 60.432 61.111 0.00 0.00 0.00 4.40
1997 2051 1.630244 AATGCTTGACTCGCTCGCAC 61.630 55.000 0.00 0.00 32.94 5.34
1998 2052 1.374631 AATGCTTGACTCGCTCGCA 60.375 52.632 0.00 0.00 34.83 5.10
1999 2053 1.059994 CAATGCTTGACTCGCTCGC 59.940 57.895 0.00 0.00 0.00 5.03
2000 2054 0.644331 CTCAATGCTTGACTCGCTCG 59.356 55.000 0.00 0.00 35.46 5.03
2001 2055 1.719600 ACTCAATGCTTGACTCGCTC 58.280 50.000 0.00 0.00 35.46 5.03
2002 2056 2.029020 TGTACTCAATGCTTGACTCGCT 60.029 45.455 0.00 0.00 35.46 4.93
2003 2057 2.337583 TGTACTCAATGCTTGACTCGC 58.662 47.619 0.00 0.00 35.46 5.03
2004 2058 4.990543 TTTGTACTCAATGCTTGACTCG 57.009 40.909 0.00 0.00 35.46 4.18
2005 2059 5.909610 GTGTTTTGTACTCAATGCTTGACTC 59.090 40.000 0.00 0.00 35.46 3.36
2006 2060 5.221048 GGTGTTTTGTACTCAATGCTTGACT 60.221 40.000 0.00 0.00 35.46 3.41
2007 2061 4.976116 GGTGTTTTGTACTCAATGCTTGAC 59.024 41.667 0.00 0.00 35.46 3.18
2008 2062 4.887071 AGGTGTTTTGTACTCAATGCTTGA 59.113 37.500 0.00 0.00 38.17 3.02
2009 2063 5.186996 AGGTGTTTTGTACTCAATGCTTG 57.813 39.130 0.00 0.00 33.32 4.01
2010 2064 4.887071 TGAGGTGTTTTGTACTCAATGCTT 59.113 37.500 0.00 0.00 37.06 3.91
2011 2065 4.460263 TGAGGTGTTTTGTACTCAATGCT 58.540 39.130 0.00 0.00 37.06 3.79
2012 2066 4.829064 TGAGGTGTTTTGTACTCAATGC 57.171 40.909 0.00 0.00 37.06 3.56
2013 2067 5.681105 CGTTTGAGGTGTTTTGTACTCAATG 59.319 40.000 6.77 0.65 45.91 2.82
2014 2068 5.355910 ACGTTTGAGGTGTTTTGTACTCAAT 59.644 36.000 6.77 0.00 45.91 2.57
2015 2069 4.696402 ACGTTTGAGGTGTTTTGTACTCAA 59.304 37.500 0.00 0.00 45.24 3.02
2016 2070 4.255301 ACGTTTGAGGTGTTTTGTACTCA 58.745 39.130 0.00 0.00 38.12 3.41
2017 2071 4.870221 ACGTTTGAGGTGTTTTGTACTC 57.130 40.909 0.00 0.00 0.00 2.59
2107 2161 3.764049 GAGCGACGACAACGGTGC 61.764 66.667 0.00 0.00 44.46 5.01
2108 2162 3.103911 GGAGCGACGACAACGGTG 61.104 66.667 0.00 0.00 44.46 4.94
2109 2163 4.353437 GGGAGCGACGACAACGGT 62.353 66.667 0.00 0.00 44.46 4.83
2145 2208 2.355363 CCGGCTGTCGTCGACAAA 60.355 61.111 26.79 7.35 42.26 2.83
2226 2301 1.902508 GGTGTCAGGTTCCTCAGATCA 59.097 52.381 0.00 0.00 0.00 2.92
2234 2309 3.606687 ACGATATTTGGTGTCAGGTTCC 58.393 45.455 0.00 0.00 0.00 3.62
2279 2354 1.686800 GGGTGGCGAGGTTAGGGTA 60.687 63.158 0.00 0.00 0.00 3.69
2294 2369 3.655211 CTGCCAGCTCCTTGGGGT 61.655 66.667 0.00 0.00 38.72 4.95
2349 2424 5.395435 GCCTCCTATTCTCCTTAAGTTCGTT 60.395 44.000 0.97 0.00 0.00 3.85
2358 2433 2.176247 TTCGGCCTCCTATTCTCCTT 57.824 50.000 0.00 0.00 0.00 3.36
2367 2442 0.543174 AGTCAGTCTTTCGGCCTCCT 60.543 55.000 0.00 0.00 0.00 3.69
2372 2447 1.779569 TTTCGAGTCAGTCTTTCGGC 58.220 50.000 0.00 0.00 35.21 5.54
2425 2501 7.512992 AGATTGGTAGGATTTTAGTCCTCATG 58.487 38.462 0.00 0.00 45.51 3.07
2426 2502 7.698163 AGATTGGTAGGATTTTAGTCCTCAT 57.302 36.000 0.00 0.00 45.51 2.90
2446 2522 6.407525 GGTGTTTCAGATCAGGCTAGTAGATT 60.408 42.308 0.00 0.00 0.00 2.40
2458 2534 4.335416 GGGATTTCTGGTGTTTCAGATCA 58.665 43.478 0.00 0.00 42.57 2.92
2466 2542 1.636003 GGAGAGGGGATTTCTGGTGTT 59.364 52.381 0.00 0.00 0.00 3.32
2497 2573 0.687757 CCCCTCCTCCTGTCGATTCA 60.688 60.000 0.00 0.00 0.00 2.57
2498 2574 0.397254 TCCCCTCCTCCTGTCGATTC 60.397 60.000 0.00 0.00 0.00 2.52
2499 2575 0.397816 CTCCCCTCCTCCTGTCGATT 60.398 60.000 0.00 0.00 0.00 3.34
2500 2576 1.231641 CTCCCCTCCTCCTGTCGAT 59.768 63.158 0.00 0.00 0.00 3.59
2556 2634 1.613520 GGCGACTAGGGAAAGCCTTTT 60.614 52.381 0.00 0.00 44.06 2.27
2557 2635 0.035343 GGCGACTAGGGAAAGCCTTT 60.035 55.000 0.00 0.00 44.06 3.11
2598 2678 8.322091 AGAGTTAGAAAATTAGCACTACCACAT 58.678 33.333 0.00 0.00 0.00 3.21
2599 2679 7.676947 AGAGTTAGAAAATTAGCACTACCACA 58.323 34.615 0.00 0.00 0.00 4.17
2600 2680 8.035984 AGAGAGTTAGAAAATTAGCACTACCAC 58.964 37.037 0.00 0.00 0.00 4.16
2601 2681 8.135382 AGAGAGTTAGAAAATTAGCACTACCA 57.865 34.615 0.00 0.00 0.00 3.25
2605 2685 9.425577 GTGTAAGAGAGTTAGAAAATTAGCACT 57.574 33.333 0.00 0.00 0.00 4.40
2606 2686 8.657729 GGTGTAAGAGAGTTAGAAAATTAGCAC 58.342 37.037 0.00 0.00 0.00 4.40
2607 2687 8.372459 TGGTGTAAGAGAGTTAGAAAATTAGCA 58.628 33.333 0.00 0.00 0.00 3.49
2608 2688 8.773404 TGGTGTAAGAGAGTTAGAAAATTAGC 57.227 34.615 0.00 0.00 0.00 3.09
2610 2690 9.886132 GGATGGTGTAAGAGAGTTAGAAAATTA 57.114 33.333 0.00 0.00 0.00 1.40
2611 2691 7.549488 CGGATGGTGTAAGAGAGTTAGAAAATT 59.451 37.037 0.00 0.00 0.00 1.82
2612 2692 7.042335 CGGATGGTGTAAGAGAGTTAGAAAAT 58.958 38.462 0.00 0.00 0.00 1.82
2613 2693 6.209986 TCGGATGGTGTAAGAGAGTTAGAAAA 59.790 38.462 0.00 0.00 0.00 2.29
2614 2694 5.713389 TCGGATGGTGTAAGAGAGTTAGAAA 59.287 40.000 0.00 0.00 0.00 2.52
2615 2695 5.258841 TCGGATGGTGTAAGAGAGTTAGAA 58.741 41.667 0.00 0.00 0.00 2.10
2616 2696 4.851843 TCGGATGGTGTAAGAGAGTTAGA 58.148 43.478 0.00 0.00 0.00 2.10
2617 2697 5.776173 ATCGGATGGTGTAAGAGAGTTAG 57.224 43.478 0.00 0.00 0.00 2.34
2618 2698 6.832384 ACTTATCGGATGGTGTAAGAGAGTTA 59.168 38.462 0.00 0.00 0.00 2.24
2619 2699 5.657302 ACTTATCGGATGGTGTAAGAGAGTT 59.343 40.000 0.00 0.00 0.00 3.01
2620 2700 5.202004 ACTTATCGGATGGTGTAAGAGAGT 58.798 41.667 0.00 0.00 0.00 3.24
2621 2701 5.776173 ACTTATCGGATGGTGTAAGAGAG 57.224 43.478 0.00 0.00 0.00 3.20
2622 2702 6.070995 ACAAACTTATCGGATGGTGTAAGAGA 60.071 38.462 0.00 0.00 0.00 3.10
2623 2703 6.106673 ACAAACTTATCGGATGGTGTAAGAG 58.893 40.000 0.00 0.00 0.00 2.85
2624 2704 6.045072 ACAAACTTATCGGATGGTGTAAGA 57.955 37.500 0.00 0.00 0.00 2.10
2625 2705 8.433421 AATACAAACTTATCGGATGGTGTAAG 57.567 34.615 0.00 0.00 0.00 2.34
2700 2780 8.334632 GGGTCACTTTGTAAAATCAAATGTTTG 58.665 33.333 0.00 0.00 36.83 2.93
2701 2781 7.497579 GGGGTCACTTTGTAAAATCAAATGTTT 59.502 33.333 0.00 0.00 36.83 2.83
2702 2782 6.989759 GGGGTCACTTTGTAAAATCAAATGTT 59.010 34.615 0.00 0.00 36.83 2.71
2703 2783 6.098982 TGGGGTCACTTTGTAAAATCAAATGT 59.901 34.615 0.00 0.00 36.83 2.71
2704 2784 6.423604 GTGGGGTCACTTTGTAAAATCAAATG 59.576 38.462 0.00 0.00 40.58 2.32
2705 2785 6.098982 TGTGGGGTCACTTTGTAAAATCAAAT 59.901 34.615 0.00 0.00 43.94 2.32
2706 2786 5.422331 TGTGGGGTCACTTTGTAAAATCAAA 59.578 36.000 0.00 0.00 43.94 2.69
2707 2787 4.956700 TGTGGGGTCACTTTGTAAAATCAA 59.043 37.500 0.00 0.00 43.94 2.57
2708 2788 4.537751 TGTGGGGTCACTTTGTAAAATCA 58.462 39.130 0.00 0.00 43.94 2.57
2709 2789 5.010617 ACATGTGGGGTCACTTTGTAAAATC 59.989 40.000 0.00 0.00 43.94 2.17
2710 2790 4.898861 ACATGTGGGGTCACTTTGTAAAAT 59.101 37.500 0.00 0.00 43.94 1.82
2711 2791 4.282496 ACATGTGGGGTCACTTTGTAAAA 58.718 39.130 0.00 0.00 43.94 1.52
2712 2792 3.886505 GACATGTGGGGTCACTTTGTAAA 59.113 43.478 1.15 0.00 43.94 2.01
2713 2793 3.117851 TGACATGTGGGGTCACTTTGTAA 60.118 43.478 1.15 0.00 43.94 2.41
2714 2794 2.439880 TGACATGTGGGGTCACTTTGTA 59.560 45.455 1.15 0.00 43.94 2.41
2715 2795 1.214175 TGACATGTGGGGTCACTTTGT 59.786 47.619 1.15 0.00 43.94 2.83
2716 2796 1.881973 CTGACATGTGGGGTCACTTTG 59.118 52.381 1.15 0.00 43.94 2.77
2717 2797 1.774254 TCTGACATGTGGGGTCACTTT 59.226 47.619 1.15 0.00 43.94 2.66
2718 2798 1.434188 TCTGACATGTGGGGTCACTT 58.566 50.000 1.15 0.00 43.94 3.16
2719 2799 1.072331 GTTCTGACATGTGGGGTCACT 59.928 52.381 1.15 0.00 43.94 3.41
2720 2800 1.523758 GTTCTGACATGTGGGGTCAC 58.476 55.000 1.15 0.00 40.16 3.67
2721 2801 0.400213 GGTTCTGACATGTGGGGTCA 59.600 55.000 1.15 0.00 42.62 4.02
2722 2802 0.400213 TGGTTCTGACATGTGGGGTC 59.600 55.000 1.15 0.00 35.83 4.46
2723 2803 1.075601 ATGGTTCTGACATGTGGGGT 58.924 50.000 1.15 0.00 0.00 4.95
2724 2804 1.466856 CATGGTTCTGACATGTGGGG 58.533 55.000 1.15 0.00 40.54 4.96
2730 2810 0.036732 ACGCCACATGGTTCTGACAT 59.963 50.000 0.00 0.00 37.57 3.06
2731 2811 0.179032 AACGCCACATGGTTCTGACA 60.179 50.000 0.00 0.00 37.57 3.58
2732 2812 0.951558 AAACGCCACATGGTTCTGAC 59.048 50.000 0.00 0.00 37.57 3.51
2733 2813 1.202758 AGAAACGCCACATGGTTCTGA 60.203 47.619 0.00 0.00 37.57 3.27
2734 2814 1.238439 AGAAACGCCACATGGTTCTG 58.762 50.000 0.00 0.00 37.57 3.02
2735 2815 1.981256 AAGAAACGCCACATGGTTCT 58.019 45.000 0.00 0.00 37.57 3.01
2736 2816 2.793278 AAAGAAACGCCACATGGTTC 57.207 45.000 0.00 0.00 37.57 3.62
2737 2817 2.820330 CAAAAGAAACGCCACATGGTT 58.180 42.857 0.00 0.00 37.57 3.67
2738 2818 1.537990 GCAAAAGAAACGCCACATGGT 60.538 47.619 0.00 0.00 37.57 3.55
2739 2819 1.139163 GCAAAAGAAACGCCACATGG 58.861 50.000 0.00 0.00 38.53 3.66
2740 2820 0.777631 CGCAAAAGAAACGCCACATG 59.222 50.000 0.00 0.00 0.00 3.21
2741 2821 0.318614 CCGCAAAAGAAACGCCACAT 60.319 50.000 0.00 0.00 0.00 3.21
2742 2822 1.064946 CCGCAAAAGAAACGCCACA 59.935 52.632 0.00 0.00 0.00 4.17
2743 2823 1.660264 CCCGCAAAAGAAACGCCAC 60.660 57.895 0.00 0.00 0.00 5.01
2744 2824 2.725008 CCCGCAAAAGAAACGCCA 59.275 55.556 0.00 0.00 0.00 5.69
2745 2825 2.733218 GCCCGCAAAAGAAACGCC 60.733 61.111 0.00 0.00 0.00 5.68
2746 2826 2.992407 TTCGCCCGCAAAAGAAACGC 62.992 55.000 0.00 0.00 0.00 4.84
2747 2827 1.009449 TTCGCCCGCAAAAGAAACG 60.009 52.632 0.00 0.00 0.00 3.60
2748 2828 0.030235 AGTTCGCCCGCAAAAGAAAC 59.970 50.000 0.00 0.00 0.00 2.78
2749 2829 0.741915 AAGTTCGCCCGCAAAAGAAA 59.258 45.000 0.00 0.00 0.00 2.52
2750 2830 0.741915 AAAGTTCGCCCGCAAAAGAA 59.258 45.000 0.00 0.00 0.00 2.52
2751 2831 0.030101 CAAAGTTCGCCCGCAAAAGA 59.970 50.000 0.00 0.00 0.00 2.52
2752 2832 0.248866 ACAAAGTTCGCCCGCAAAAG 60.249 50.000 0.00 0.00 0.00 2.27
2753 2833 1.022735 TACAAAGTTCGCCCGCAAAA 58.977 45.000 0.00 0.00 0.00 2.44
2754 2834 1.240256 ATACAAAGTTCGCCCGCAAA 58.760 45.000 0.00 0.00 0.00 3.68
2755 2835 1.240256 AATACAAAGTTCGCCCGCAA 58.760 45.000 0.00 0.00 0.00 4.85
2756 2836 1.733360 GTAATACAAAGTTCGCCCGCA 59.267 47.619 0.00 0.00 0.00 5.69
2757 2837 2.004733 AGTAATACAAAGTTCGCCCGC 58.995 47.619 0.00 0.00 0.00 6.13
2758 2838 3.434299 ACAAGTAATACAAAGTTCGCCCG 59.566 43.478 0.00 0.00 0.00 6.13
2759 2839 5.151389 CAACAAGTAATACAAAGTTCGCCC 58.849 41.667 0.00 0.00 0.00 6.13
2760 2840 5.049267 TCCAACAAGTAATACAAAGTTCGCC 60.049 40.000 0.00 0.00 0.00 5.54
2761 2841 5.992729 TCCAACAAGTAATACAAAGTTCGC 58.007 37.500 0.00 0.00 0.00 4.70
2762 2842 7.416154 TCTCCAACAAGTAATACAAAGTTCG 57.584 36.000 0.00 0.00 0.00 3.95
2763 2843 7.797123 CGTTCTCCAACAAGTAATACAAAGTTC 59.203 37.037 0.00 0.00 32.14 3.01
2764 2844 7.281549 ACGTTCTCCAACAAGTAATACAAAGTT 59.718 33.333 0.00 0.00 32.14 2.66
2765 2845 6.764560 ACGTTCTCCAACAAGTAATACAAAGT 59.235 34.615 0.00 0.00 32.14 2.66
2766 2846 7.186021 ACGTTCTCCAACAAGTAATACAAAG 57.814 36.000 0.00 0.00 32.14 2.77
2767 2847 7.095523 GCTACGTTCTCCAACAAGTAATACAAA 60.096 37.037 0.00 0.00 32.14 2.83
2768 2848 6.366877 GCTACGTTCTCCAACAAGTAATACAA 59.633 38.462 0.00 0.00 32.14 2.41
2769 2849 5.865552 GCTACGTTCTCCAACAAGTAATACA 59.134 40.000 0.00 0.00 32.14 2.29
2770 2850 5.865552 TGCTACGTTCTCCAACAAGTAATAC 59.134 40.000 0.00 0.00 32.14 1.89
2771 2851 6.028146 TGCTACGTTCTCCAACAAGTAATA 57.972 37.500 0.00 0.00 32.14 0.98
2772 2852 4.890088 TGCTACGTTCTCCAACAAGTAAT 58.110 39.130 0.00 0.00 32.14 1.89
2773 2853 4.038282 TCTGCTACGTTCTCCAACAAGTAA 59.962 41.667 0.00 0.00 32.14 2.24
2774 2854 3.570975 TCTGCTACGTTCTCCAACAAGTA 59.429 43.478 0.00 0.00 32.14 2.24
2775 2855 2.364324 TCTGCTACGTTCTCCAACAAGT 59.636 45.455 0.00 0.00 32.14 3.16
2776 2856 3.026630 TCTGCTACGTTCTCCAACAAG 57.973 47.619 0.00 0.00 32.14 3.16
2777 2857 3.462483 TTCTGCTACGTTCTCCAACAA 57.538 42.857 0.00 0.00 32.14 2.83
2778 2858 3.462483 TTTCTGCTACGTTCTCCAACA 57.538 42.857 0.00 0.00 32.14 3.33
2779 2859 4.451096 TGAATTTCTGCTACGTTCTCCAAC 59.549 41.667 0.00 0.00 0.00 3.77
2780 2860 4.637276 TGAATTTCTGCTACGTTCTCCAA 58.363 39.130 0.00 0.00 0.00 3.53
2781 2861 4.265904 TGAATTTCTGCTACGTTCTCCA 57.734 40.909 0.00 0.00 0.00 3.86
2782 2862 5.607119 TTTGAATTTCTGCTACGTTCTCC 57.393 39.130 0.00 0.00 0.00 3.71
2783 2863 8.507470 AAATTTTGAATTTCTGCTACGTTCTC 57.493 30.769 0.00 0.00 0.00 2.87
2784 2864 8.871686 AAAATTTTGAATTTCTGCTACGTTCT 57.128 26.923 1.75 0.00 0.00 3.01
2785 2865 8.968242 AGAAAATTTTGAATTTCTGCTACGTTC 58.032 29.630 8.47 0.00 42.62 3.95
2786 2866 8.871686 AGAAAATTTTGAATTTCTGCTACGTT 57.128 26.923 8.47 0.00 42.62 3.99
2787 2867 9.394477 GTAGAAAATTTTGAATTTCTGCTACGT 57.606 29.630 8.47 0.00 43.67 3.57
2788 2868 8.567221 CGTAGAAAATTTTGAATTTCTGCTACG 58.433 33.333 22.91 22.91 43.67 3.51
2789 2869 8.365938 GCGTAGAAAATTTTGAATTTCTGCTAC 58.634 33.333 8.47 8.90 43.67 3.58
2790 2870 8.079203 TGCGTAGAAAATTTTGAATTTCTGCTA 58.921 29.630 8.47 0.00 43.67 3.49
2791 2871 6.922957 TGCGTAGAAAATTTTGAATTTCTGCT 59.077 30.769 8.47 0.00 43.67 4.24
2792 2872 7.104326 TGCGTAGAAAATTTTGAATTTCTGC 57.896 32.000 8.47 8.21 43.67 4.26
2793 2873 8.538856 TGTTGCGTAGAAAATTTTGAATTTCTG 58.461 29.630 8.47 0.00 43.67 3.02
2794 2874 8.539674 GTGTTGCGTAGAAAATTTTGAATTTCT 58.460 29.630 8.47 0.48 45.29 2.52
2795 2875 7.792048 GGTGTTGCGTAGAAAATTTTGAATTTC 59.208 33.333 8.47 0.00 36.11 2.17
2796 2876 7.278868 TGGTGTTGCGTAGAAAATTTTGAATTT 59.721 29.630 8.47 0.00 0.00 1.82
2797 2877 6.758886 TGGTGTTGCGTAGAAAATTTTGAATT 59.241 30.769 8.47 0.00 0.00 2.17
2798 2878 6.276847 TGGTGTTGCGTAGAAAATTTTGAAT 58.723 32.000 8.47 0.00 0.00 2.57
2799 2879 5.651530 TGGTGTTGCGTAGAAAATTTTGAA 58.348 33.333 8.47 0.00 0.00 2.69
2800 2880 5.250235 TGGTGTTGCGTAGAAAATTTTGA 57.750 34.783 8.47 0.00 0.00 2.69
2801 2881 5.746245 TCTTGGTGTTGCGTAGAAAATTTTG 59.254 36.000 8.47 0.00 0.00 2.44
2802 2882 5.897050 TCTTGGTGTTGCGTAGAAAATTTT 58.103 33.333 2.28 2.28 0.00 1.82
2803 2883 5.508200 TCTTGGTGTTGCGTAGAAAATTT 57.492 34.783 0.00 0.00 0.00 1.82
2804 2884 5.240623 TGATCTTGGTGTTGCGTAGAAAATT 59.759 36.000 0.00 0.00 0.00 1.82
2805 2885 4.759693 TGATCTTGGTGTTGCGTAGAAAAT 59.240 37.500 0.00 0.00 0.00 1.82
2806 2886 4.130857 TGATCTTGGTGTTGCGTAGAAAA 58.869 39.130 0.00 0.00 0.00 2.29
2807 2887 3.734463 TGATCTTGGTGTTGCGTAGAAA 58.266 40.909 0.00 0.00 0.00 2.52
2808 2888 3.394674 TGATCTTGGTGTTGCGTAGAA 57.605 42.857 0.00 0.00 0.00 2.10
2809 2889 3.394674 TTGATCTTGGTGTTGCGTAGA 57.605 42.857 0.00 0.00 0.00 2.59
2810 2890 3.935203 AGATTGATCTTGGTGTTGCGTAG 59.065 43.478 0.00 0.00 31.97 3.51
2811 2891 3.937814 AGATTGATCTTGGTGTTGCGTA 58.062 40.909 0.00 0.00 31.97 4.42
2812 2892 2.783135 AGATTGATCTTGGTGTTGCGT 58.217 42.857 0.00 0.00 31.97 5.24
2813 2893 4.260907 CCATAGATTGATCTTGGTGTTGCG 60.261 45.833 0.00 0.00 38.32 4.85
2814 2894 4.883585 TCCATAGATTGATCTTGGTGTTGC 59.116 41.667 15.48 0.00 38.32 4.17
2815 2895 6.351711 TCTCCATAGATTGATCTTGGTGTTG 58.648 40.000 15.48 9.16 38.32 3.33
2816 2896 6.566079 TCTCCATAGATTGATCTTGGTGTT 57.434 37.500 15.48 0.00 38.32 3.32
2817 2897 6.760440 ATCTCCATAGATTGATCTTGGTGT 57.240 37.500 15.48 7.26 39.55 4.16
2829 2909 7.508636 TCTCTTGTTGCTAGAATCTCCATAGAT 59.491 37.037 0.00 0.00 44.67 1.98
2830 2910 6.836007 TCTCTTGTTGCTAGAATCTCCATAGA 59.164 38.462 0.00 0.00 35.80 1.98
2831 2911 7.048629 TCTCTTGTTGCTAGAATCTCCATAG 57.951 40.000 0.00 0.00 0.00 2.23
2832 2912 6.041409 CCTCTCTTGTTGCTAGAATCTCCATA 59.959 42.308 0.00 0.00 0.00 2.74
2833 2913 5.163322 CCTCTCTTGTTGCTAGAATCTCCAT 60.163 44.000 0.00 0.00 0.00 3.41
2834 2914 4.161189 CCTCTCTTGTTGCTAGAATCTCCA 59.839 45.833 0.00 0.00 0.00 3.86
2835 2915 4.442753 CCCTCTCTTGTTGCTAGAATCTCC 60.443 50.000 0.00 0.00 0.00 3.71
2836 2916 4.404073 TCCCTCTCTTGTTGCTAGAATCTC 59.596 45.833 0.00 0.00 0.00 2.75
2837 2917 4.357325 TCCCTCTCTTGTTGCTAGAATCT 58.643 43.478 0.00 0.00 0.00 2.40
2838 2918 4.404073 TCTCCCTCTCTTGTTGCTAGAATC 59.596 45.833 0.00 0.00 0.00 2.52
2839 2919 4.357325 TCTCCCTCTCTTGTTGCTAGAAT 58.643 43.478 0.00 0.00 0.00 2.40
2840 2920 3.766591 CTCTCCCTCTCTTGTTGCTAGAA 59.233 47.826 0.00 0.00 0.00 2.10
2841 2921 3.360867 CTCTCCCTCTCTTGTTGCTAGA 58.639 50.000 0.00 0.00 0.00 2.43
2842 2922 2.430332 CCTCTCCCTCTCTTGTTGCTAG 59.570 54.545 0.00 0.00 0.00 3.42
2843 2923 2.043115 TCCTCTCCCTCTCTTGTTGCTA 59.957 50.000 0.00 0.00 0.00 3.49
2844 2924 1.203237 TCCTCTCCCTCTCTTGTTGCT 60.203 52.381 0.00 0.00 0.00 3.91
2845 2925 1.270907 TCCTCTCCCTCTCTTGTTGC 58.729 55.000 0.00 0.00 0.00 4.17
2846 2926 3.102972 TCATCCTCTCCCTCTCTTGTTG 58.897 50.000 0.00 0.00 0.00 3.33
2847 2927 3.373830 CTCATCCTCTCCCTCTCTTGTT 58.626 50.000 0.00 0.00 0.00 2.83
2848 2928 2.954539 GCTCATCCTCTCCCTCTCTTGT 60.955 54.545 0.00 0.00 0.00 3.16
2849 2929 1.688197 GCTCATCCTCTCCCTCTCTTG 59.312 57.143 0.00 0.00 0.00 3.02
2850 2930 1.290431 TGCTCATCCTCTCCCTCTCTT 59.710 52.381 0.00 0.00 0.00 2.85
2851 2931 0.932955 TGCTCATCCTCTCCCTCTCT 59.067 55.000 0.00 0.00 0.00 3.10
2852 2932 1.895131 GATGCTCATCCTCTCCCTCTC 59.105 57.143 0.00 0.00 31.76 3.20
2853 2933 1.504660 AGATGCTCATCCTCTCCCTCT 59.495 52.381 6.27 0.00 38.58 3.69
2854 2934 2.014010 AGATGCTCATCCTCTCCCTC 57.986 55.000 6.27 0.00 38.58 4.30
2855 2935 2.328319 GAAGATGCTCATCCTCTCCCT 58.672 52.381 6.27 0.00 38.58 4.20
2856 2936 2.045524 TGAAGATGCTCATCCTCTCCC 58.954 52.381 6.27 0.00 38.58 4.30
2857 2937 4.322650 GGTATGAAGATGCTCATCCTCTCC 60.323 50.000 6.27 4.87 38.58 3.71
2858 2938 4.322650 GGGTATGAAGATGCTCATCCTCTC 60.323 50.000 6.27 2.71 38.58 3.20
2859 2939 3.582208 GGGTATGAAGATGCTCATCCTCT 59.418 47.826 6.27 0.00 38.58 3.69
2860 2940 3.582208 AGGGTATGAAGATGCTCATCCTC 59.418 47.826 6.27 4.20 38.58 3.71
2861 2941 3.596101 AGGGTATGAAGATGCTCATCCT 58.404 45.455 6.27 0.00 38.58 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.