Multiple sequence alignment - TraesCS5B01G455600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G455600 chr5B 100.000 2462 0 0 1 2462 629927292 629924831 0.000000e+00 4547.0
1 TraesCS5B01G455600 chr5B 88.757 1263 85 31 943 2185 633171391 633172616 0.000000e+00 1493.0
2 TraesCS5B01G455600 chr5B 87.584 1337 100 34 581 1863 628724794 628723470 0.000000e+00 1489.0
3 TraesCS5B01G455600 chr5B 84.659 1245 107 40 737 1925 649498286 649499502 0.000000e+00 1164.0
4 TraesCS5B01G455600 chr5B 87.487 999 91 22 815 1790 611677574 611678561 0.000000e+00 1122.0
5 TraesCS5B01G455600 chr5B 81.337 1436 136 57 581 1938 629953587 629952206 0.000000e+00 1046.0
6 TraesCS5B01G455600 chr5B 92.349 745 28 15 1143 1863 625131203 625130464 0.000000e+00 1033.0
7 TraesCS5B01G455600 chr5B 87.727 717 39 23 737 1435 649694168 649694853 0.000000e+00 791.0
8 TraesCS5B01G455600 chr5B 95.513 312 11 2 2109 2419 625130439 625130130 1.700000e-136 496.0
9 TraesCS5B01G455600 chr5B 90.370 270 24 2 1957 2226 649506052 649506319 1.080000e-93 353.0
10 TraesCS5B01G455600 chr5B 89.259 270 26 3 1957 2226 649696244 649696510 3.920000e-88 335.0
11 TraesCS5B01G455600 chr5B 87.823 271 26 5 1957 2226 629951831 629951567 6.610000e-81 311.0
12 TraesCS5B01G455600 chr5B 94.022 184 7 2 2237 2419 628722685 628722505 2.410000e-70 276.0
13 TraesCS5B01G455600 chr5B 92.199 141 10 1 2255 2395 633172612 633172751 5.370000e-47 198.0
14 TraesCS5B01G455600 chr5B 82.812 192 27 5 758 944 639671350 639671160 1.510000e-37 167.0
15 TraesCS5B01G455600 chr5B 82.386 176 11 10 1750 1925 649695250 649695405 4.270000e-28 135.0
16 TraesCS5B01G455600 chr5B 94.872 39 2 0 1753 1791 611678749 611678787 7.350000e-06 62.1
17 TraesCS5B01G455600 chr5B 100.000 29 0 0 2434 2462 625130144 625130116 1.000000e-03 54.7
18 TraesCS5B01G455600 chr5B 100.000 29 0 0 2434 2462 628722519 628722491 1.000000e-03 54.7
19 TraesCS5B01G455600 chr5D 86.887 1243 101 32 581 1770 501450450 501449217 0.000000e+00 1336.0
20 TraesCS5B01G455600 chr5D 88.211 967 78 17 816 1752 495199783 495200743 0.000000e+00 1122.0
21 TraesCS5B01G455600 chr5D 88.792 919 42 29 936 1834 296965067 296965944 0.000000e+00 1070.0
22 TraesCS5B01G455600 chr5D 87.568 925 76 19 737 1632 517213185 517214099 0.000000e+00 1035.0
23 TraesCS5B01G455600 chr5D 89.925 268 25 2 1957 2224 517215143 517215408 6.520000e-91 344.0
24 TraesCS5B01G455600 chr5D 91.102 236 20 1 1949 2183 296998065 296998300 3.950000e-83 318.0
25 TraesCS5B01G455600 chr5D 90.625 224 21 0 1957 2180 517307078 517307301 5.150000e-77 298.0
26 TraesCS5B01G455600 chr5D 84.722 72 6 3 1871 1938 296965953 296966023 1.580000e-07 67.6
27 TraesCS5B01G455600 chr5A 87.795 975 73 22 815 1752 619344065 619345030 0.000000e+00 1099.0
28 TraesCS5B01G455600 chr5A 87.247 988 92 16 737 1698 644310183 644311162 0.000000e+00 1096.0
29 TraesCS5B01G455600 chr5A 86.681 946 64 32 936 1831 625715378 625716311 0.000000e+00 992.0
30 TraesCS5B01G455600 chr5A 89.451 455 34 7 1871 2322 625716322 625716765 1.650000e-156 562.0
31 TraesCS5B01G455600 chr5A 88.603 272 31 0 1955 2226 644312257 644312528 5.070000e-87 331.0
32 TraesCS5B01G455600 chr5A 89.655 58 2 2 1757 1814 644311255 644311308 1.220000e-08 71.3
33 TraesCS5B01G455600 chr5A 100.000 31 0 0 1760 1790 619345054 619345084 9.510000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G455600 chr5B 629924831 629927292 2461 True 4547.000000 4547 100.000000 1 2462 1 chr5B.!!$R1 2461
1 TraesCS5B01G455600 chr5B 649498286 649499502 1216 False 1164.000000 1164 84.659000 737 1925 1 chr5B.!!$F1 1188
2 TraesCS5B01G455600 chr5B 633171391 633172751 1360 False 845.500000 1493 90.478000 943 2395 2 chr5B.!!$F4 1452
3 TraesCS5B01G455600 chr5B 629951567 629953587 2020 True 678.500000 1046 84.580000 581 2226 2 chr5B.!!$R5 1645
4 TraesCS5B01G455600 chr5B 628722491 628724794 2303 True 606.566667 1489 93.868667 581 2462 3 chr5B.!!$R4 1881
5 TraesCS5B01G455600 chr5B 611677574 611678787 1213 False 592.050000 1122 91.179500 815 1791 2 chr5B.!!$F3 976
6 TraesCS5B01G455600 chr5B 625130116 625131203 1087 True 527.900000 1033 95.954000 1143 2462 3 chr5B.!!$R3 1319
7 TraesCS5B01G455600 chr5B 649694168 649696510 2342 False 420.333333 791 86.457333 737 2226 3 chr5B.!!$F5 1489
8 TraesCS5B01G455600 chr5D 501449217 501450450 1233 True 1336.000000 1336 86.887000 581 1770 1 chr5D.!!$R1 1189
9 TraesCS5B01G455600 chr5D 495199783 495200743 960 False 1122.000000 1122 88.211000 816 1752 1 chr5D.!!$F2 936
10 TraesCS5B01G455600 chr5D 517213185 517215408 2223 False 689.500000 1035 88.746500 737 2224 2 chr5D.!!$F5 1487
11 TraesCS5B01G455600 chr5D 296965067 296966023 956 False 568.800000 1070 86.757000 936 1938 2 chr5D.!!$F4 1002
12 TraesCS5B01G455600 chr5A 625715378 625716765 1387 False 777.000000 992 88.066000 936 2322 2 chr5A.!!$F2 1386
13 TraesCS5B01G455600 chr5A 619344065 619345084 1019 False 578.700000 1099 93.897500 815 1790 2 chr5A.!!$F1 975
14 TraesCS5B01G455600 chr5A 644310183 644312528 2345 False 499.433333 1096 88.501667 737 2226 3 chr5A.!!$F3 1489

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
218 219 0.036022 GTTGCCAAGCTCAGTCTCCT 59.964 55.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1711 1880 1.600413 CGGTTTCTTCAGCTTGCAACC 60.6 52.381 0.0 0.0 0.0 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 9.767684 TTTCGTATAGTTTTATTGTGCATGAAG 57.232 29.630 0.00 0.00 0.00 3.02
41 42 7.915508 TCGTATAGTTTTATTGTGCATGAAGG 58.084 34.615 0.00 0.00 0.00 3.46
42 43 7.551262 TCGTATAGTTTTATTGTGCATGAAGGT 59.449 33.333 0.00 0.00 0.00 3.50
43 44 7.639850 CGTATAGTTTTATTGTGCATGAAGGTG 59.360 37.037 0.00 0.00 0.00 4.00
44 45 4.559153 AGTTTTATTGTGCATGAAGGTGC 58.441 39.130 0.00 0.00 45.25 5.01
45 46 4.281688 AGTTTTATTGTGCATGAAGGTGCT 59.718 37.500 0.00 0.00 45.27 4.40
46 47 4.870123 TTTATTGTGCATGAAGGTGCTT 57.130 36.364 0.00 0.00 45.27 3.91
47 48 5.973899 TTTATTGTGCATGAAGGTGCTTA 57.026 34.783 0.00 0.00 45.27 3.09
48 49 6.528537 TTTATTGTGCATGAAGGTGCTTAT 57.471 33.333 0.00 0.00 45.27 1.73
49 50 6.528537 TTATTGTGCATGAAGGTGCTTATT 57.471 33.333 0.00 0.00 45.27 1.40
50 51 4.870123 TTGTGCATGAAGGTGCTTATTT 57.130 36.364 0.00 0.00 45.27 1.40
51 52 4.439305 TGTGCATGAAGGTGCTTATTTC 57.561 40.909 0.00 0.00 45.27 2.17
52 53 3.825585 TGTGCATGAAGGTGCTTATTTCA 59.174 39.130 0.00 0.00 45.27 2.69
53 54 4.168760 GTGCATGAAGGTGCTTATTTCAC 58.831 43.478 0.00 0.00 45.27 3.18
54 55 4.081406 TGCATGAAGGTGCTTATTTCACT 58.919 39.130 0.00 0.00 45.27 3.41
55 56 4.523943 TGCATGAAGGTGCTTATTTCACTT 59.476 37.500 0.00 0.00 45.27 3.16
56 57 5.010922 TGCATGAAGGTGCTTATTTCACTTT 59.989 36.000 0.00 0.00 45.27 2.66
57 58 5.928264 GCATGAAGGTGCTTATTTCACTTTT 59.072 36.000 0.00 0.00 41.82 2.27
58 59 6.424812 GCATGAAGGTGCTTATTTCACTTTTT 59.575 34.615 0.00 0.00 41.82 1.94
86 87 7.696992 ATTTCCGGTTTAGTGTTCATATTGT 57.303 32.000 0.00 0.00 0.00 2.71
87 88 6.489127 TTCCGGTTTAGTGTTCATATTGTG 57.511 37.500 0.00 0.00 0.00 3.33
88 89 4.393680 TCCGGTTTAGTGTTCATATTGTGC 59.606 41.667 0.00 0.00 0.00 4.57
89 90 4.155099 CCGGTTTAGTGTTCATATTGTGCA 59.845 41.667 0.00 0.00 0.00 4.57
90 91 5.163663 CCGGTTTAGTGTTCATATTGTGCAT 60.164 40.000 0.00 0.00 0.00 3.96
91 92 5.965334 CGGTTTAGTGTTCATATTGTGCATC 59.035 40.000 0.00 0.00 0.00 3.91
92 93 5.965334 GGTTTAGTGTTCATATTGTGCATCG 59.035 40.000 0.00 0.00 0.00 3.84
93 94 6.403200 GGTTTAGTGTTCATATTGTGCATCGT 60.403 38.462 0.00 0.00 0.00 3.73
94 95 7.201574 GGTTTAGTGTTCATATTGTGCATCGTA 60.202 37.037 0.00 0.00 0.00 3.43
95 96 7.835634 TTAGTGTTCATATTGTGCATCGTAA 57.164 32.000 0.00 0.00 0.00 3.18
96 97 6.925610 AGTGTTCATATTGTGCATCGTAAT 57.074 33.333 0.00 0.00 0.00 1.89
97 98 6.718388 AGTGTTCATATTGTGCATCGTAATG 58.282 36.000 0.00 0.00 35.87 1.90
98 99 6.316140 AGTGTTCATATTGTGCATCGTAATGT 59.684 34.615 0.00 0.00 35.18 2.71
99 100 6.411782 GTGTTCATATTGTGCATCGTAATGTG 59.588 38.462 0.00 0.00 35.18 3.21
100 101 5.671742 TCATATTGTGCATCGTAATGTGG 57.328 39.130 0.00 0.00 35.18 4.17
101 102 2.849880 ATTGTGCATCGTAATGTGGC 57.150 45.000 0.00 0.00 35.18 5.01
102 103 0.445829 TTGTGCATCGTAATGTGGCG 59.554 50.000 0.00 0.00 35.18 5.69
103 104 0.390472 TGTGCATCGTAATGTGGCGA 60.390 50.000 0.00 0.00 41.50 5.54
104 105 0.724549 GTGCATCGTAATGTGGCGAA 59.275 50.000 0.00 0.00 40.61 4.70
105 106 1.129624 GTGCATCGTAATGTGGCGAAA 59.870 47.619 0.00 0.00 40.61 3.46
106 107 1.807142 TGCATCGTAATGTGGCGAAAA 59.193 42.857 0.00 0.00 40.61 2.29
107 108 2.226674 TGCATCGTAATGTGGCGAAAAA 59.773 40.909 0.00 0.00 40.61 1.94
108 109 3.119673 TGCATCGTAATGTGGCGAAAAAT 60.120 39.130 0.00 0.00 40.61 1.82
109 110 3.857093 GCATCGTAATGTGGCGAAAAATT 59.143 39.130 0.00 0.00 40.61 1.82
110 111 4.027702 GCATCGTAATGTGGCGAAAAATTC 60.028 41.667 0.00 0.00 40.61 2.17
111 112 4.750952 TCGTAATGTGGCGAAAAATTCA 57.249 36.364 0.00 0.00 33.96 2.57
112 113 5.109662 TCGTAATGTGGCGAAAAATTCAA 57.890 34.783 0.00 0.00 33.96 2.69
113 114 5.150683 TCGTAATGTGGCGAAAAATTCAAG 58.849 37.500 0.00 0.00 33.96 3.02
114 115 4.201485 CGTAATGTGGCGAAAAATTCAAGC 60.201 41.667 0.00 0.00 0.00 4.01
121 122 5.454736 GGCGAAAAATTCAAGCCATAAAG 57.545 39.130 8.66 0.00 46.48 1.85
122 123 4.929211 GGCGAAAAATTCAAGCCATAAAGT 59.071 37.500 8.66 0.00 46.48 2.66
123 124 6.096695 GGCGAAAAATTCAAGCCATAAAGTA 58.903 36.000 8.66 0.00 46.48 2.24
124 125 6.756542 GGCGAAAAATTCAAGCCATAAAGTAT 59.243 34.615 8.66 0.00 46.48 2.12
125 126 7.254084 GGCGAAAAATTCAAGCCATAAAGTATG 60.254 37.037 8.66 0.00 46.48 2.39
141 142 9.123902 CATAAAGTATGGATGTCATTTGAAGGA 57.876 33.333 0.00 0.00 37.30 3.36
142 143 9.872684 ATAAAGTATGGATGTCATTTGAAGGAT 57.127 29.630 0.00 0.00 37.30 3.24
143 144 8.599624 AAAGTATGGATGTCATTTGAAGGATT 57.400 30.769 0.00 0.00 37.30 3.01
144 145 7.814264 AGTATGGATGTCATTTGAAGGATTC 57.186 36.000 0.00 0.00 40.40 2.52
145 146 7.348815 AGTATGGATGTCATTTGAAGGATTCA 58.651 34.615 0.00 0.00 44.42 2.57
146 147 7.284034 AGTATGGATGTCATTTGAAGGATTCAC 59.716 37.037 0.00 0.00 45.12 3.18
147 148 6.260714 TATGGATGTCATTTGAAGGATTCACG 59.739 38.462 0.00 0.00 45.12 4.35
148 149 8.597242 TATGGATGTCATTTGAAGGATTCACGG 61.597 40.741 0.00 0.00 45.12 4.94
155 156 2.178912 GAAGGATTCACGGTTGTGGA 57.821 50.000 0.00 0.00 46.62 4.02
156 157 2.500229 GAAGGATTCACGGTTGTGGAA 58.500 47.619 0.00 0.00 46.62 3.53
157 158 2.185004 AGGATTCACGGTTGTGGAAG 57.815 50.000 0.00 0.00 46.42 3.46
158 159 1.697432 AGGATTCACGGTTGTGGAAGA 59.303 47.619 0.00 0.00 46.42 2.87
159 160 1.804748 GGATTCACGGTTGTGGAAGAC 59.195 52.381 0.00 0.00 46.42 3.01
160 161 2.550208 GGATTCACGGTTGTGGAAGACT 60.550 50.000 0.00 0.00 46.42 3.24
161 162 3.306502 GGATTCACGGTTGTGGAAGACTA 60.307 47.826 0.00 0.00 46.42 2.59
162 163 3.823281 TTCACGGTTGTGGAAGACTAA 57.177 42.857 0.00 0.00 46.42 2.24
163 164 3.380479 TCACGGTTGTGGAAGACTAAG 57.620 47.619 0.00 0.00 46.42 2.18
164 165 2.960384 TCACGGTTGTGGAAGACTAAGA 59.040 45.455 0.00 0.00 46.42 2.10
165 166 3.005472 TCACGGTTGTGGAAGACTAAGAG 59.995 47.826 0.00 0.00 46.42 2.85
166 167 2.963782 ACGGTTGTGGAAGACTAAGAGT 59.036 45.455 0.00 0.00 0.00 3.24
167 168 3.387050 ACGGTTGTGGAAGACTAAGAGTT 59.613 43.478 0.00 0.00 0.00 3.01
168 169 4.586001 ACGGTTGTGGAAGACTAAGAGTTA 59.414 41.667 0.00 0.00 0.00 2.24
169 170 5.069516 ACGGTTGTGGAAGACTAAGAGTTAA 59.930 40.000 0.00 0.00 0.00 2.01
170 171 5.634020 CGGTTGTGGAAGACTAAGAGTTAAG 59.366 44.000 0.00 0.00 0.00 1.85
171 172 6.516194 CGGTTGTGGAAGACTAAGAGTTAAGA 60.516 42.308 0.00 0.00 0.00 2.10
172 173 7.387643 GGTTGTGGAAGACTAAGAGTTAAGAT 58.612 38.462 0.00 0.00 0.00 2.40
173 174 7.878644 GGTTGTGGAAGACTAAGAGTTAAGATT 59.121 37.037 0.00 0.00 0.00 2.40
174 175 9.924650 GTTGTGGAAGACTAAGAGTTAAGATTA 57.075 33.333 0.00 0.00 0.00 1.75
179 180 9.974980 GGAAGACTAAGAGTTAAGATTATCTGG 57.025 37.037 0.00 0.00 0.00 3.86
198 199 7.969536 ATCTGGTTCTAAATATTGATCGTGG 57.030 36.000 0.00 0.00 0.00 4.94
199 200 6.288294 TCTGGTTCTAAATATTGATCGTGGG 58.712 40.000 0.00 0.00 0.00 4.61
200 201 5.996644 TGGTTCTAAATATTGATCGTGGGT 58.003 37.500 0.00 0.00 0.00 4.51
201 202 6.419791 TGGTTCTAAATATTGATCGTGGGTT 58.580 36.000 0.00 0.00 0.00 4.11
202 203 6.317642 TGGTTCTAAATATTGATCGTGGGTTG 59.682 38.462 0.00 0.00 0.00 3.77
203 204 6.199393 GTTCTAAATATTGATCGTGGGTTGC 58.801 40.000 0.00 0.00 0.00 4.17
204 205 4.819630 TCTAAATATTGATCGTGGGTTGCC 59.180 41.667 0.00 0.00 0.00 4.52
205 206 2.727123 ATATTGATCGTGGGTTGCCA 57.273 45.000 0.00 0.00 0.00 4.92
206 207 2.498644 TATTGATCGTGGGTTGCCAA 57.501 45.000 0.00 0.00 0.00 4.52
207 208 1.176527 ATTGATCGTGGGTTGCCAAG 58.823 50.000 0.00 0.00 0.00 3.61
208 209 1.523154 TTGATCGTGGGTTGCCAAGC 61.523 55.000 0.00 0.00 0.00 4.01
209 210 1.675641 GATCGTGGGTTGCCAAGCT 60.676 57.895 6.59 0.00 0.00 3.74
210 211 1.648467 GATCGTGGGTTGCCAAGCTC 61.648 60.000 6.59 0.00 0.00 4.09
211 212 2.410322 ATCGTGGGTTGCCAAGCTCA 62.410 55.000 6.59 0.38 0.00 4.26
212 213 2.620112 CGTGGGTTGCCAAGCTCAG 61.620 63.158 6.59 0.00 0.00 3.35
213 214 1.529244 GTGGGTTGCCAAGCTCAGT 60.529 57.895 6.59 0.00 0.00 3.41
214 215 1.228245 TGGGTTGCCAAGCTCAGTC 60.228 57.895 6.59 0.00 0.00 3.51
215 216 1.073897 GGGTTGCCAAGCTCAGTCT 59.926 57.895 6.59 0.00 0.00 3.24
216 217 0.957888 GGGTTGCCAAGCTCAGTCTC 60.958 60.000 6.59 0.00 0.00 3.36
217 218 0.957888 GGTTGCCAAGCTCAGTCTCC 60.958 60.000 0.00 0.00 0.00 3.71
218 219 0.036022 GTTGCCAAGCTCAGTCTCCT 59.964 55.000 0.00 0.00 0.00 3.69
219 220 0.322975 TTGCCAAGCTCAGTCTCCTC 59.677 55.000 0.00 0.00 0.00 3.71
220 221 1.153667 GCCAAGCTCAGTCTCCTCG 60.154 63.158 0.00 0.00 0.00 4.63
221 222 1.882989 GCCAAGCTCAGTCTCCTCGT 61.883 60.000 0.00 0.00 0.00 4.18
222 223 1.464734 CCAAGCTCAGTCTCCTCGTA 58.535 55.000 0.00 0.00 0.00 3.43
223 224 1.819288 CCAAGCTCAGTCTCCTCGTAA 59.181 52.381 0.00 0.00 0.00 3.18
224 225 2.231478 CCAAGCTCAGTCTCCTCGTAAA 59.769 50.000 0.00 0.00 0.00 2.01
225 226 3.118956 CCAAGCTCAGTCTCCTCGTAAAT 60.119 47.826 0.00 0.00 0.00 1.40
226 227 4.098044 CCAAGCTCAGTCTCCTCGTAAATA 59.902 45.833 0.00 0.00 0.00 1.40
227 228 4.904253 AGCTCAGTCTCCTCGTAAATAC 57.096 45.455 0.00 0.00 0.00 1.89
228 229 4.528920 AGCTCAGTCTCCTCGTAAATACT 58.471 43.478 0.00 0.00 0.00 2.12
229 230 4.577283 AGCTCAGTCTCCTCGTAAATACTC 59.423 45.833 0.00 0.00 0.00 2.59
230 231 4.261280 GCTCAGTCTCCTCGTAAATACTCC 60.261 50.000 0.00 0.00 0.00 3.85
231 232 4.205587 TCAGTCTCCTCGTAAATACTCCC 58.794 47.826 0.00 0.00 0.00 4.30
232 233 4.079901 TCAGTCTCCTCGTAAATACTCCCT 60.080 45.833 0.00 0.00 0.00 4.20
233 234 4.276431 CAGTCTCCTCGTAAATACTCCCTC 59.724 50.000 0.00 0.00 0.00 4.30
234 235 4.166531 AGTCTCCTCGTAAATACTCCCTCT 59.833 45.833 0.00 0.00 0.00 3.69
235 236 5.369110 AGTCTCCTCGTAAATACTCCCTCTA 59.631 44.000 0.00 0.00 0.00 2.43
236 237 6.060788 GTCTCCTCGTAAATACTCCCTCTAA 58.939 44.000 0.00 0.00 0.00 2.10
237 238 6.017192 GTCTCCTCGTAAATACTCCCTCTAAC 60.017 46.154 0.00 0.00 0.00 2.34
238 239 5.136105 TCCTCGTAAATACTCCCTCTAACC 58.864 45.833 0.00 0.00 0.00 2.85
239 240 4.891756 CCTCGTAAATACTCCCTCTAACCA 59.108 45.833 0.00 0.00 0.00 3.67
240 241 5.361857 CCTCGTAAATACTCCCTCTAACCAA 59.638 44.000 0.00 0.00 0.00 3.67
241 242 6.127253 CCTCGTAAATACTCCCTCTAACCAAA 60.127 42.308 0.00 0.00 0.00 3.28
242 243 7.243604 TCGTAAATACTCCCTCTAACCAAAA 57.756 36.000 0.00 0.00 0.00 2.44
243 244 7.854337 TCGTAAATACTCCCTCTAACCAAAAT 58.146 34.615 0.00 0.00 0.00 1.82
244 245 7.767198 TCGTAAATACTCCCTCTAACCAAAATG 59.233 37.037 0.00 0.00 0.00 2.32
245 246 7.551617 CGTAAATACTCCCTCTAACCAAAATGT 59.448 37.037 0.00 0.00 0.00 2.71
246 247 9.895138 GTAAATACTCCCTCTAACCAAAATGTA 57.105 33.333 0.00 0.00 0.00 2.29
248 249 9.462606 AAATACTCCCTCTAACCAAAATGTAAG 57.537 33.333 0.00 0.00 0.00 2.34
249 250 6.697641 ACTCCCTCTAACCAAAATGTAAGA 57.302 37.500 0.00 0.00 0.00 2.10
250 251 6.473758 ACTCCCTCTAACCAAAATGTAAGAC 58.526 40.000 0.00 0.00 0.00 3.01
251 252 6.272558 ACTCCCTCTAACCAAAATGTAAGACT 59.727 38.462 0.00 0.00 0.00 3.24
252 253 7.086685 TCCCTCTAACCAAAATGTAAGACTT 57.913 36.000 0.00 0.00 0.00 3.01
253 254 7.523415 TCCCTCTAACCAAAATGTAAGACTTT 58.477 34.615 0.00 0.00 0.00 2.66
254 255 8.002459 TCCCTCTAACCAAAATGTAAGACTTTT 58.998 33.333 0.00 0.00 0.00 2.27
255 256 8.082242 CCCTCTAACCAAAATGTAAGACTTTTG 58.918 37.037 0.00 0.00 40.42 2.44
256 257 8.630037 CCTCTAACCAAAATGTAAGACTTTTGT 58.370 33.333 0.00 0.00 39.55 2.83
258 259 9.796120 TCTAACCAAAATGTAAGACTTTTGTTG 57.204 29.630 0.00 0.00 39.55 3.33
259 260 7.841915 AACCAAAATGTAAGACTTTTGTTGG 57.158 32.000 10.62 10.62 39.55 3.77
260 261 6.941857 ACCAAAATGTAAGACTTTTGTTGGT 58.058 32.000 11.52 11.52 39.55 3.67
261 262 7.390823 ACCAAAATGTAAGACTTTTGTTGGTT 58.609 30.769 11.52 1.87 39.55 3.67
262 263 7.880713 ACCAAAATGTAAGACTTTTGTTGGTTT 59.119 29.630 11.52 0.00 39.55 3.27
263 264 8.726068 CCAAAATGTAAGACTTTTGTTGGTTTT 58.274 29.630 0.00 0.00 39.55 2.43
264 265 9.540431 CAAAATGTAAGACTTTTGTTGGTTTTG 57.460 29.630 0.00 0.00 37.50 2.44
265 266 6.902224 ATGTAAGACTTTTGTTGGTTTTGC 57.098 33.333 0.00 0.00 0.00 3.68
266 267 5.784177 TGTAAGACTTTTGTTGGTTTTGCA 58.216 33.333 0.00 0.00 0.00 4.08
267 268 5.635700 TGTAAGACTTTTGTTGGTTTTGCAC 59.364 36.000 0.00 0.00 0.00 4.57
268 269 4.264460 AGACTTTTGTTGGTTTTGCACA 57.736 36.364 0.00 0.00 0.00 4.57
269 270 4.244862 AGACTTTTGTTGGTTTTGCACAG 58.755 39.130 0.00 0.00 0.00 3.66
270 271 3.333804 ACTTTTGTTGGTTTTGCACAGG 58.666 40.909 0.00 0.00 0.00 4.00
271 272 2.393271 TTTGTTGGTTTTGCACAGGG 57.607 45.000 0.00 0.00 0.00 4.45
272 273 0.107945 TTGTTGGTTTTGCACAGGGC 60.108 50.000 0.00 0.00 45.13 5.19
283 284 2.453983 GCACAGGGCATAAAAAGCAA 57.546 45.000 0.00 0.00 43.97 3.91
284 285 2.068519 GCACAGGGCATAAAAAGCAAC 58.931 47.619 0.00 0.00 43.97 4.17
285 286 2.289010 GCACAGGGCATAAAAAGCAACT 60.289 45.455 0.00 0.00 43.97 3.16
286 287 3.803368 GCACAGGGCATAAAAAGCAACTT 60.803 43.478 0.00 0.00 43.97 2.66
287 288 4.560513 GCACAGGGCATAAAAAGCAACTTA 60.561 41.667 0.00 0.00 43.97 2.24
288 289 4.923281 CACAGGGCATAAAAAGCAACTTAC 59.077 41.667 0.00 0.00 0.00 2.34
289 290 4.586841 ACAGGGCATAAAAAGCAACTTACA 59.413 37.500 0.00 0.00 0.00 2.41
290 291 5.245977 ACAGGGCATAAAAAGCAACTTACAT 59.754 36.000 0.00 0.00 0.00 2.29
291 292 6.165577 CAGGGCATAAAAAGCAACTTACATT 58.834 36.000 0.00 0.00 0.00 2.71
292 293 6.650390 CAGGGCATAAAAAGCAACTTACATTT 59.350 34.615 0.00 0.00 0.00 2.32
293 294 7.173047 CAGGGCATAAAAAGCAACTTACATTTT 59.827 33.333 0.00 0.00 0.00 1.82
294 295 7.173047 AGGGCATAAAAAGCAACTTACATTTTG 59.827 33.333 0.00 0.00 0.00 2.44
295 296 7.041440 GGGCATAAAAAGCAACTTACATTTTGT 60.041 33.333 0.00 0.00 0.00 2.83
296 297 8.341903 GGCATAAAAAGCAACTTACATTTTGTT 58.658 29.630 0.00 0.00 0.00 2.83
300 301 8.690680 AAAAAGCAACTTACATTTTGTTACGA 57.309 26.923 0.00 0.00 0.00 3.43
301 302 8.690680 AAAAGCAACTTACATTTTGTTACGAA 57.309 26.923 0.00 0.00 0.00 3.85
302 303 7.908193 AAGCAACTTACATTTTGTTACGAAG 57.092 32.000 0.00 0.00 0.00 3.79
303 304 5.912955 AGCAACTTACATTTTGTTACGAAGC 59.087 36.000 0.00 0.00 0.00 3.86
304 305 5.164320 GCAACTTACATTTTGTTACGAAGCG 60.164 40.000 0.00 0.00 0.00 4.68
305 306 5.910637 ACTTACATTTTGTTACGAAGCGA 57.089 34.783 0.00 0.00 0.00 4.93
306 307 5.912528 ACTTACATTTTGTTACGAAGCGAG 58.087 37.500 0.00 0.00 0.00 5.03
307 308 5.464389 ACTTACATTTTGTTACGAAGCGAGT 59.536 36.000 0.00 0.00 0.00 4.18
308 309 6.642131 ACTTACATTTTGTTACGAAGCGAGTA 59.358 34.615 0.00 0.00 0.00 2.59
309 310 5.260027 ACATTTTGTTACGAAGCGAGTAC 57.740 39.130 0.00 0.00 0.00 2.73
310 311 4.746115 ACATTTTGTTACGAAGCGAGTACA 59.254 37.500 0.00 0.00 0.00 2.90
311 312 5.407387 ACATTTTGTTACGAAGCGAGTACAT 59.593 36.000 0.00 0.00 0.00 2.29
312 313 6.587226 ACATTTTGTTACGAAGCGAGTACATA 59.413 34.615 0.00 0.00 0.00 2.29
313 314 7.116662 ACATTTTGTTACGAAGCGAGTACATAA 59.883 33.333 0.00 0.00 0.00 1.90
314 315 5.997732 TTGTTACGAAGCGAGTACATAAC 57.002 39.130 0.00 0.00 0.00 1.89
315 316 5.045668 TGTTACGAAGCGAGTACATAACA 57.954 39.130 0.00 0.00 0.00 2.41
316 317 5.643664 TGTTACGAAGCGAGTACATAACAT 58.356 37.500 0.00 0.00 0.00 2.71
317 318 5.740569 TGTTACGAAGCGAGTACATAACATC 59.259 40.000 0.00 0.00 0.00 3.06
318 319 3.360533 ACGAAGCGAGTACATAACATCG 58.639 45.455 0.00 0.65 38.19 3.84
319 320 2.719556 CGAAGCGAGTACATAACATCGG 59.280 50.000 0.00 0.00 35.76 4.18
320 321 3.547413 CGAAGCGAGTACATAACATCGGA 60.547 47.826 0.00 0.00 35.76 4.55
321 322 4.357142 GAAGCGAGTACATAACATCGGAA 58.643 43.478 0.00 0.00 35.76 4.30
322 323 3.966154 AGCGAGTACATAACATCGGAAG 58.034 45.455 0.00 0.00 35.76 3.46
338 339 5.571784 TCGGAAGATACTTGTCGTAATGT 57.428 39.130 0.00 0.00 33.31 2.71
339 340 5.575957 TCGGAAGATACTTGTCGTAATGTC 58.424 41.667 0.00 0.00 33.31 3.06
340 341 4.738740 CGGAAGATACTTGTCGTAATGTCC 59.261 45.833 0.00 0.00 0.00 4.02
341 342 5.657474 GGAAGATACTTGTCGTAATGTCCA 58.343 41.667 0.00 0.00 30.93 4.02
342 343 6.103997 GGAAGATACTTGTCGTAATGTCCAA 58.896 40.000 0.00 0.00 30.93 3.53
343 344 6.035758 GGAAGATACTTGTCGTAATGTCCAAC 59.964 42.308 0.00 0.00 30.93 3.77
344 345 6.032956 AGATACTTGTCGTAATGTCCAACA 57.967 37.500 0.00 0.00 0.00 3.33
345 346 5.867716 AGATACTTGTCGTAATGTCCAACAC 59.132 40.000 0.00 0.00 0.00 3.32
346 347 2.798283 ACTTGTCGTAATGTCCAACACG 59.202 45.455 0.00 0.00 35.78 4.49
347 348 1.141645 TGTCGTAATGTCCAACACGC 58.858 50.000 0.00 0.00 34.50 5.34
348 349 1.269883 TGTCGTAATGTCCAACACGCT 60.270 47.619 0.00 0.00 34.50 5.07
349 350 1.126113 GTCGTAATGTCCAACACGCTG 59.874 52.381 0.00 0.00 34.50 5.18
350 351 1.000052 TCGTAATGTCCAACACGCTGA 60.000 47.619 0.00 0.00 34.50 4.26
351 352 1.390123 CGTAATGTCCAACACGCTGAG 59.610 52.381 0.00 0.00 0.00 3.35
352 353 1.128692 GTAATGTCCAACACGCTGAGC 59.871 52.381 0.00 0.00 0.00 4.26
353 354 1.237285 AATGTCCAACACGCTGAGCC 61.237 55.000 0.00 0.00 0.00 4.70
354 355 2.280797 GTCCAACACGCTGAGCCA 60.281 61.111 0.00 0.00 0.00 4.75
355 356 1.672356 GTCCAACACGCTGAGCCAT 60.672 57.895 0.00 0.00 0.00 4.40
356 357 1.375908 TCCAACACGCTGAGCCATC 60.376 57.895 0.00 0.00 0.00 3.51
357 358 1.376424 CCAACACGCTGAGCCATCT 60.376 57.895 0.00 0.00 0.00 2.90
358 359 1.642037 CCAACACGCTGAGCCATCTG 61.642 60.000 0.00 0.00 0.00 2.90
359 360 0.671472 CAACACGCTGAGCCATCTGA 60.671 55.000 0.00 0.00 0.00 3.27
360 361 0.390866 AACACGCTGAGCCATCTGAG 60.391 55.000 0.00 0.00 0.00 3.35
361 362 1.253593 ACACGCTGAGCCATCTGAGA 61.254 55.000 0.00 0.00 0.00 3.27
362 363 0.805322 CACGCTGAGCCATCTGAGAC 60.805 60.000 0.00 0.00 0.00 3.36
363 364 1.253593 ACGCTGAGCCATCTGAGACA 61.254 55.000 0.00 0.00 0.00 3.41
364 365 0.805322 CGCTGAGCCATCTGAGACAC 60.805 60.000 0.00 0.00 0.00 3.67
365 366 0.461693 GCTGAGCCATCTGAGACACC 60.462 60.000 0.00 0.00 0.00 4.16
366 367 0.900421 CTGAGCCATCTGAGACACCA 59.100 55.000 0.00 0.00 0.00 4.17
367 368 1.277273 CTGAGCCATCTGAGACACCAA 59.723 52.381 0.00 0.00 0.00 3.67
368 369 1.277273 TGAGCCATCTGAGACACCAAG 59.723 52.381 0.00 0.00 0.00 3.61
369 370 0.617413 AGCCATCTGAGACACCAAGG 59.383 55.000 0.00 0.00 0.00 3.61
370 371 1.028868 GCCATCTGAGACACCAAGGC 61.029 60.000 0.00 0.00 0.00 4.35
371 372 0.617413 CCATCTGAGACACCAAGGCT 59.383 55.000 0.00 0.00 39.48 4.58
372 373 1.004044 CCATCTGAGACACCAAGGCTT 59.996 52.381 0.00 0.00 33.72 4.35
373 374 2.237143 CCATCTGAGACACCAAGGCTTA 59.763 50.000 0.00 0.00 33.72 3.09
374 375 3.118112 CCATCTGAGACACCAAGGCTTAT 60.118 47.826 0.00 0.00 33.72 1.73
375 376 3.616956 TCTGAGACACCAAGGCTTATG 57.383 47.619 0.00 4.16 33.72 1.90
376 377 2.906389 TCTGAGACACCAAGGCTTATGT 59.094 45.455 14.31 14.31 33.72 2.29
377 378 4.093743 TCTGAGACACCAAGGCTTATGTA 58.906 43.478 14.37 1.76 33.72 2.29
378 379 4.530553 TCTGAGACACCAAGGCTTATGTAA 59.469 41.667 14.37 5.26 33.72 2.41
379 380 5.189736 TCTGAGACACCAAGGCTTATGTAAT 59.810 40.000 14.37 8.04 33.72 1.89
380 381 5.428253 TGAGACACCAAGGCTTATGTAATC 58.572 41.667 14.37 14.77 33.72 1.75
381 382 4.781934 AGACACCAAGGCTTATGTAATCC 58.218 43.478 14.37 4.79 20.59 3.01
382 383 4.475016 AGACACCAAGGCTTATGTAATCCT 59.525 41.667 14.37 6.61 33.51 3.24
383 384 4.526970 ACACCAAGGCTTATGTAATCCTG 58.473 43.478 13.12 0.00 32.54 3.86
384 385 3.316308 CACCAAGGCTTATGTAATCCTGC 59.684 47.826 0.00 0.00 32.54 4.85
385 386 3.053693 ACCAAGGCTTATGTAATCCTGCA 60.054 43.478 0.00 0.00 32.54 4.41
386 387 3.953612 CCAAGGCTTATGTAATCCTGCAA 59.046 43.478 0.00 0.00 32.54 4.08
387 388 4.037208 CCAAGGCTTATGTAATCCTGCAAG 59.963 45.833 0.00 0.00 32.54 4.01
388 389 4.778213 AGGCTTATGTAATCCTGCAAGA 57.222 40.909 0.00 0.00 34.07 3.02
389 390 5.116084 AGGCTTATGTAATCCTGCAAGAA 57.884 39.130 0.00 0.00 34.07 2.52
390 391 5.509498 AGGCTTATGTAATCCTGCAAGAAA 58.491 37.500 0.00 0.00 34.07 2.52
391 392 5.358160 AGGCTTATGTAATCCTGCAAGAAAC 59.642 40.000 0.00 0.00 34.07 2.78
392 393 5.266242 GCTTATGTAATCCTGCAAGAAACG 58.734 41.667 0.00 0.00 34.07 3.60
393 394 5.163754 GCTTATGTAATCCTGCAAGAAACGT 60.164 40.000 0.00 0.00 34.07 3.99
394 395 6.036735 GCTTATGTAATCCTGCAAGAAACGTA 59.963 38.462 0.00 0.00 34.07 3.57
395 396 7.413657 GCTTATGTAATCCTGCAAGAAACGTAA 60.414 37.037 12.03 12.03 34.07 3.18
396 397 8.500753 TTATGTAATCCTGCAAGAAACGTAAT 57.499 30.769 9.90 0.00 34.07 1.89
397 398 6.176975 TGTAATCCTGCAAGAAACGTAATG 57.823 37.500 0.00 0.00 34.07 1.90
398 399 4.701956 AATCCTGCAAGAAACGTAATGG 57.298 40.909 0.00 0.00 34.07 3.16
399 400 3.410631 TCCTGCAAGAAACGTAATGGA 57.589 42.857 0.00 0.00 34.07 3.41
400 401 3.745799 TCCTGCAAGAAACGTAATGGAA 58.254 40.909 0.00 0.00 34.07 3.53
401 402 4.138290 TCCTGCAAGAAACGTAATGGAAA 58.862 39.130 0.00 0.00 34.07 3.13
402 403 4.764823 TCCTGCAAGAAACGTAATGGAAAT 59.235 37.500 0.00 0.00 34.07 2.17
403 404 5.095490 CCTGCAAGAAACGTAATGGAAATC 58.905 41.667 0.00 0.00 34.07 2.17
404 405 5.106157 CCTGCAAGAAACGTAATGGAAATCT 60.106 40.000 0.00 0.00 34.07 2.40
405 406 6.093495 CCTGCAAGAAACGTAATGGAAATCTA 59.907 38.462 0.00 0.00 34.07 1.98
406 407 7.361713 CCTGCAAGAAACGTAATGGAAATCTAA 60.362 37.037 0.00 0.00 34.07 2.10
407 408 7.877003 TGCAAGAAACGTAATGGAAATCTAAA 58.123 30.769 0.00 0.00 0.00 1.85
408 409 8.353684 TGCAAGAAACGTAATGGAAATCTAAAA 58.646 29.630 0.00 0.00 0.00 1.52
409 410 9.187455 GCAAGAAACGTAATGGAAATCTAAAAA 57.813 29.630 0.00 0.00 0.00 1.94
411 412 9.687210 AAGAAACGTAATGGAAATCTAAAAACC 57.313 29.630 0.00 0.00 0.00 3.27
412 413 8.852135 AGAAACGTAATGGAAATCTAAAAACCA 58.148 29.630 0.00 0.00 35.09 3.67
413 414 8.806177 AAACGTAATGGAAATCTAAAAACCAC 57.194 30.769 0.00 0.00 33.38 4.16
414 415 7.754851 ACGTAATGGAAATCTAAAAACCACT 57.245 32.000 0.00 0.00 33.38 4.00
415 416 8.851541 ACGTAATGGAAATCTAAAAACCACTA 57.148 30.769 0.00 0.00 33.38 2.74
416 417 8.943002 ACGTAATGGAAATCTAAAAACCACTAG 58.057 33.333 0.00 0.00 33.38 2.57
417 418 8.943002 CGTAATGGAAATCTAAAAACCACTAGT 58.057 33.333 0.00 0.00 33.38 2.57
420 421 9.588096 AATGGAAATCTAAAAACCACTAGTTCT 57.412 29.630 0.00 0.00 37.88 3.01
421 422 8.990163 TGGAAATCTAAAAACCACTAGTTCTT 57.010 30.769 0.00 0.00 37.88 2.52
425 426 9.569122 AAATCTAAAAACCACTAGTTCTTAGCA 57.431 29.630 0.00 0.00 38.42 3.49
426 427 9.740710 AATCTAAAAACCACTAGTTCTTAGCAT 57.259 29.630 0.00 0.00 38.42 3.79
427 428 8.547967 TCTAAAAACCACTAGTTCTTAGCATG 57.452 34.615 0.00 0.00 38.42 4.06
428 429 8.154856 TCTAAAAACCACTAGTTCTTAGCATGT 58.845 33.333 0.00 0.00 38.42 3.21
429 430 7.582667 AAAAACCACTAGTTCTTAGCATGTT 57.417 32.000 0.00 0.00 37.88 2.71
430 431 7.582667 AAAACCACTAGTTCTTAGCATGTTT 57.417 32.000 0.00 0.00 37.88 2.83
431 432 6.803154 AACCACTAGTTCTTAGCATGTTTC 57.197 37.500 0.00 0.00 30.99 2.78
432 433 5.865085 ACCACTAGTTCTTAGCATGTTTCA 58.135 37.500 0.00 0.00 32.25 2.69
433 434 5.701290 ACCACTAGTTCTTAGCATGTTTCAC 59.299 40.000 0.00 0.00 32.25 3.18
434 435 5.700832 CCACTAGTTCTTAGCATGTTTCACA 59.299 40.000 0.00 0.00 32.25 3.58
435 436 6.347725 CCACTAGTTCTTAGCATGTTTCACAC 60.348 42.308 0.00 0.00 32.25 3.82
436 437 4.732285 AGTTCTTAGCATGTTTCACACG 57.268 40.909 0.00 0.00 0.00 4.49
437 438 4.127171 AGTTCTTAGCATGTTTCACACGT 58.873 39.130 0.00 0.00 0.00 4.49
438 439 4.574828 AGTTCTTAGCATGTTTCACACGTT 59.425 37.500 0.00 0.00 0.00 3.99
439 440 5.065988 AGTTCTTAGCATGTTTCACACGTTT 59.934 36.000 0.00 0.00 0.00 3.60
440 441 5.493133 TCTTAGCATGTTTCACACGTTTT 57.507 34.783 0.00 0.00 0.00 2.43
441 442 5.885881 TCTTAGCATGTTTCACACGTTTTT 58.114 33.333 0.00 0.00 0.00 1.94
442 443 5.968848 TCTTAGCATGTTTCACACGTTTTTC 59.031 36.000 0.00 0.00 0.00 2.29
443 444 4.370364 AGCATGTTTCACACGTTTTTCT 57.630 36.364 0.00 0.00 0.00 2.52
444 445 4.351192 AGCATGTTTCACACGTTTTTCTC 58.649 39.130 0.00 0.00 0.00 2.87
445 446 4.101942 GCATGTTTCACACGTTTTTCTCA 58.898 39.130 0.00 0.00 0.00 3.27
446 447 4.027702 GCATGTTTCACACGTTTTTCTCAC 60.028 41.667 0.00 0.00 0.00 3.51
447 448 4.086199 TGTTTCACACGTTTTTCTCACC 57.914 40.909 0.00 0.00 0.00 4.02
448 449 3.502595 TGTTTCACACGTTTTTCTCACCA 59.497 39.130 0.00 0.00 0.00 4.17
449 450 4.023107 TGTTTCACACGTTTTTCTCACCAA 60.023 37.500 0.00 0.00 0.00 3.67
450 451 4.768130 TTCACACGTTTTTCTCACCAAA 57.232 36.364 0.00 0.00 0.00 3.28
451 452 4.768130 TCACACGTTTTTCTCACCAAAA 57.232 36.364 0.00 0.00 0.00 2.44
452 453 5.122512 TCACACGTTTTTCTCACCAAAAA 57.877 34.783 0.00 0.00 33.72 1.94
453 454 5.157781 TCACACGTTTTTCTCACCAAAAAG 58.842 37.500 0.00 0.00 36.21 2.27
454 455 5.048643 TCACACGTTTTTCTCACCAAAAAGA 60.049 36.000 0.00 0.00 36.21 2.52
455 456 5.804979 CACACGTTTTTCTCACCAAAAAGAT 59.195 36.000 0.00 0.00 36.21 2.40
456 457 6.310224 CACACGTTTTTCTCACCAAAAAGATT 59.690 34.615 0.00 0.00 36.21 2.40
457 458 6.530181 ACACGTTTTTCTCACCAAAAAGATTC 59.470 34.615 0.00 0.00 36.21 2.52
458 459 6.529829 CACGTTTTTCTCACCAAAAAGATTCA 59.470 34.615 0.00 0.00 36.21 2.57
459 460 7.062839 CACGTTTTTCTCACCAAAAAGATTCAA 59.937 33.333 0.00 0.00 36.21 2.69
460 461 7.275560 ACGTTTTTCTCACCAAAAAGATTCAAG 59.724 33.333 0.00 0.00 36.21 3.02
461 462 7.254084 CGTTTTTCTCACCAAAAAGATTCAAGG 60.254 37.037 0.00 0.00 36.21 3.61
462 463 5.789643 TTCTCACCAAAAAGATTCAAGGG 57.210 39.130 0.00 0.00 0.00 3.95
463 464 5.060427 TCTCACCAAAAAGATTCAAGGGA 57.940 39.130 0.00 0.00 0.00 4.20
464 465 5.072741 TCTCACCAAAAAGATTCAAGGGAG 58.927 41.667 0.00 0.00 0.00 4.30
465 466 5.060427 TCACCAAAAAGATTCAAGGGAGA 57.940 39.130 0.00 0.00 0.00 3.71
466 467 5.072741 TCACCAAAAAGATTCAAGGGAGAG 58.927 41.667 0.00 0.00 0.00 3.20
467 468 4.219288 CACCAAAAAGATTCAAGGGAGAGG 59.781 45.833 0.00 0.00 0.00 3.69
468 469 4.106341 ACCAAAAAGATTCAAGGGAGAGGA 59.894 41.667 0.00 0.00 0.00 3.71
469 470 5.079643 CCAAAAAGATTCAAGGGAGAGGAA 58.920 41.667 0.00 0.00 0.00 3.36
470 471 5.539955 CCAAAAAGATTCAAGGGAGAGGAAA 59.460 40.000 0.00 0.00 0.00 3.13
471 472 6.212187 CCAAAAAGATTCAAGGGAGAGGAAAT 59.788 38.462 0.00 0.00 0.00 2.17
472 473 7.256439 CCAAAAAGATTCAAGGGAGAGGAAATT 60.256 37.037 0.00 0.00 0.00 1.82
473 474 7.862274 AAAAGATTCAAGGGAGAGGAAATTT 57.138 32.000 0.00 0.00 0.00 1.82
474 475 8.956446 AAAAGATTCAAGGGAGAGGAAATTTA 57.044 30.769 0.00 0.00 0.00 1.40
475 476 9.552695 AAAAGATTCAAGGGAGAGGAAATTTAT 57.447 29.630 0.00 0.00 0.00 1.40
516 517 9.988350 ATATTACGTACATGCAAAAGAAAAGAG 57.012 29.630 0.00 0.00 0.00 2.85
517 518 5.108385 ACGTACATGCAAAAGAAAAGAGG 57.892 39.130 0.00 0.00 0.00 3.69
518 519 4.819630 ACGTACATGCAAAAGAAAAGAGGA 59.180 37.500 0.00 0.00 0.00 3.71
519 520 5.298276 ACGTACATGCAAAAGAAAAGAGGAA 59.702 36.000 0.00 0.00 0.00 3.36
520 521 6.183360 ACGTACATGCAAAAGAAAAGAGGAAA 60.183 34.615 0.00 0.00 0.00 3.13
521 522 6.863126 CGTACATGCAAAAGAAAAGAGGAAAT 59.137 34.615 0.00 0.00 0.00 2.17
522 523 7.382218 CGTACATGCAAAAGAAAAGAGGAAATT 59.618 33.333 0.00 0.00 0.00 1.82
523 524 9.045223 GTACATGCAAAAGAAAAGAGGAAATTT 57.955 29.630 0.00 0.00 0.00 1.82
524 525 8.146479 ACATGCAAAAGAAAAGAGGAAATTTC 57.854 30.769 9.83 9.83 36.11 2.17
525 526 7.989170 ACATGCAAAAGAAAAGAGGAAATTTCT 59.011 29.630 17.42 4.20 45.30 2.52
526 527 9.480053 CATGCAAAAGAAAAGAGGAAATTTCTA 57.520 29.630 17.42 0.00 43.24 2.10
535 536 9.958234 GAAAAGAGGAAATTTCTAATAGCATCC 57.042 33.333 17.42 0.00 33.72 3.51
536 537 9.479549 AAAAGAGGAAATTTCTAATAGCATCCA 57.520 29.630 17.42 0.00 0.00 3.41
537 538 8.457238 AAGAGGAAATTTCTAATAGCATCCAC 57.543 34.615 17.42 0.00 0.00 4.02
538 539 7.001073 AGAGGAAATTTCTAATAGCATCCACC 58.999 38.462 17.42 0.00 0.00 4.61
539 540 5.765182 AGGAAATTTCTAATAGCATCCACCG 59.235 40.000 17.42 0.00 0.00 4.94
540 541 5.531287 GGAAATTTCTAATAGCATCCACCGT 59.469 40.000 17.42 0.00 0.00 4.83
541 542 6.377327 AAATTTCTAATAGCATCCACCGTG 57.623 37.500 0.00 0.00 0.00 4.94
542 543 2.526304 TCTAATAGCATCCACCGTGC 57.474 50.000 0.00 0.00 42.81 5.34
547 548 4.294523 GCATCCACCGTGCTGTTA 57.705 55.556 0.00 0.00 39.45 2.41
548 549 1.794222 GCATCCACCGTGCTGTTAC 59.206 57.895 0.00 0.00 39.45 2.50
549 550 0.953471 GCATCCACCGTGCTGTTACA 60.953 55.000 0.00 0.00 39.45 2.41
550 551 1.737838 CATCCACCGTGCTGTTACAT 58.262 50.000 0.00 0.00 0.00 2.29
551 552 1.398041 CATCCACCGTGCTGTTACATG 59.602 52.381 0.00 0.00 0.00 3.21
552 553 0.394938 TCCACCGTGCTGTTACATGT 59.605 50.000 2.69 2.69 0.00 3.21
553 554 0.796312 CCACCGTGCTGTTACATGTC 59.204 55.000 0.00 0.00 0.00 3.06
554 555 1.507562 CACCGTGCTGTTACATGTCA 58.492 50.000 0.00 0.00 0.00 3.58
555 556 2.076100 CACCGTGCTGTTACATGTCAT 58.924 47.619 0.00 0.00 0.00 3.06
556 557 3.258228 CACCGTGCTGTTACATGTCATA 58.742 45.455 0.00 0.00 0.00 2.15
557 558 3.871006 CACCGTGCTGTTACATGTCATAT 59.129 43.478 0.00 0.00 0.00 1.78
558 559 3.871006 ACCGTGCTGTTACATGTCATATG 59.129 43.478 0.00 0.00 0.00 1.78
559 560 3.248363 CCGTGCTGTTACATGTCATATGG 59.752 47.826 0.00 0.00 0.00 2.74
560 561 4.119136 CGTGCTGTTACATGTCATATGGA 58.881 43.478 0.00 0.00 0.00 3.41
561 562 4.751600 CGTGCTGTTACATGTCATATGGAT 59.248 41.667 0.00 0.00 0.00 3.41
562 563 5.237127 CGTGCTGTTACATGTCATATGGATT 59.763 40.000 0.00 0.00 0.00 3.01
563 564 6.238456 CGTGCTGTTACATGTCATATGGATTT 60.238 38.462 0.00 0.00 0.00 2.17
564 565 7.483307 GTGCTGTTACATGTCATATGGATTTT 58.517 34.615 0.00 0.00 0.00 1.82
565 566 7.975616 GTGCTGTTACATGTCATATGGATTTTT 59.024 33.333 0.00 0.00 0.00 1.94
633 634 8.032451 CCAATTTATAAGTCGGTGGTTTCATTT 58.968 33.333 0.00 0.00 0.00 2.32
634 635 8.859156 CAATTTATAAGTCGGTGGTTTCATTTG 58.141 33.333 0.00 0.00 0.00 2.32
704 715 2.310930 TTTCCCCTGGCTTTGCTGGT 62.311 55.000 0.00 0.00 0.00 4.00
707 718 1.667722 CCCTGGCTTTGCTGGTTTC 59.332 57.895 0.00 0.00 0.00 2.78
708 719 0.829182 CCCTGGCTTTGCTGGTTTCT 60.829 55.000 0.00 0.00 0.00 2.52
709 720 1.547675 CCCTGGCTTTGCTGGTTTCTA 60.548 52.381 0.00 0.00 0.00 2.10
710 721 1.815003 CCTGGCTTTGCTGGTTTCTAG 59.185 52.381 0.00 0.00 0.00 2.43
718 729 4.727507 TTGCTGGTTTCTAGTTTTGCAA 57.272 36.364 0.00 0.00 36.93 4.08
719 730 4.040445 TGCTGGTTTCTAGTTTTGCAAC 57.960 40.909 0.00 0.00 0.00 4.17
760 784 2.559698 TTTCTGCGGTCCATTTCTCA 57.440 45.000 0.00 0.00 0.00 3.27
765 789 0.721718 GCGGTCCATTTCTCACTTCG 59.278 55.000 0.00 0.00 0.00 3.79
777 801 2.612212 TCTCACTTCGGTTGACAAAAGC 59.388 45.455 0.00 0.00 0.00 3.51
785 809 2.223688 CGGTTGACAAAAGCATTGACCA 60.224 45.455 9.00 4.31 0.00 4.02
790 814 4.378774 TGACAAAAGCATTGACCAAATGG 58.621 39.130 9.00 0.00 45.05 3.16
845 870 1.889105 CCATTCGCCACCGATCCAG 60.889 63.158 0.00 0.00 43.97 3.86
1606 1767 0.600557 CTCTGTCGCCTGTCTGTTCT 59.399 55.000 0.00 0.00 0.00 3.01
1607 1768 0.315251 TCTGTCGCCTGTCTGTTCTG 59.685 55.000 0.00 0.00 0.00 3.02
1698 1867 8.102676 TCTGAATCTGATAAATTCACTTGGTCA 58.897 33.333 0.00 0.00 38.02 4.02
1705 1874 7.829725 TGATAAATTCACTTGGTCATTTCCTG 58.170 34.615 0.00 0.00 0.00 3.86
1708 1877 7.595819 AAATTCACTTGGTCATTTCCTGTAA 57.404 32.000 0.00 0.00 0.00 2.41
1711 1880 6.573664 TCACTTGGTCATTTCCTGTAATTG 57.426 37.500 0.00 0.00 0.00 2.32
1740 1982 2.704572 CTGAAGAAACCGAGGAGCATT 58.295 47.619 0.00 0.00 0.00 3.56
1795 2060 8.306680 ACATTTGTGTATGTCAAGTACTGTAC 57.693 34.615 9.93 9.93 33.58 2.90
1796 2061 8.148351 ACATTTGTGTATGTCAAGTACTGTACT 58.852 33.333 14.53 14.53 35.79 2.73
1797 2062 9.634163 CATTTGTGTATGTCAAGTACTGTACTA 57.366 33.333 19.97 5.81 38.26 1.82
1834 2101 1.696336 ACCTATGCTATGTCCAGCTGG 59.304 52.381 27.87 27.87 42.30 4.85
1835 2102 1.610102 CCTATGCTATGTCCAGCTGGC 60.610 57.143 28.91 22.24 42.30 4.85
1859 2126 9.766277 GGCGTAGAATACATTATACTACTGTAC 57.234 37.037 0.00 0.00 43.24 2.90
1916 2187 1.214175 TGTCGCCCAACCCAATATCAT 59.786 47.619 0.00 0.00 0.00 2.45
1986 3198 1.678101 AGTGAAAGCCAGTTGCAAGAC 59.322 47.619 0.00 0.00 44.83 3.01
2051 3270 5.663106 AGCTCAGATACACTGGAATTTAGGA 59.337 40.000 0.00 0.00 45.76 2.94
2054 3273 7.472663 GCTCAGATACACTGGAATTTAGGATCT 60.473 40.741 0.00 0.00 45.76 2.75
2160 3379 2.749076 GTGCCATGTTGCTTGATGACTA 59.251 45.455 0.00 0.00 0.00 2.59
2165 3384 6.183360 TGCCATGTTGCTTGATGACTAAATAG 60.183 38.462 0.00 0.00 0.00 1.73
2208 3427 6.097554 TGAAAGAAAAGCAGACAAAACCCATA 59.902 34.615 0.00 0.00 0.00 2.74
2299 4152 1.066858 CGGGAAGACTGCTAGCAAGAA 60.067 52.381 19.86 0.00 0.00 2.52
2327 4180 1.834263 AGCACTCTCATGAAGGGGTAC 59.166 52.381 9.24 0.00 0.00 3.34
2329 4182 2.419297 GCACTCTCATGAAGGGGTACAG 60.419 54.545 0.00 0.00 0.00 2.74
2404 4257 3.084786 GGCAGAGCAGTTCCAATTTAGT 58.915 45.455 0.00 0.00 0.00 2.24
2405 4258 3.507622 GGCAGAGCAGTTCCAATTTAGTT 59.492 43.478 0.00 0.00 0.00 2.24
2406 4259 4.021981 GGCAGAGCAGTTCCAATTTAGTTT 60.022 41.667 0.00 0.00 0.00 2.66
2407 4260 5.509670 GGCAGAGCAGTTCCAATTTAGTTTT 60.510 40.000 0.00 0.00 0.00 2.43
2408 4261 5.403466 GCAGAGCAGTTCCAATTTAGTTTTG 59.597 40.000 0.00 0.00 0.00 2.44
2409 4262 5.403466 CAGAGCAGTTCCAATTTAGTTTTGC 59.597 40.000 0.00 0.00 0.00 3.68
2410 4263 5.068987 AGAGCAGTTCCAATTTAGTTTTGCA 59.931 36.000 0.00 0.00 0.00 4.08
2411 4264 5.291971 AGCAGTTCCAATTTAGTTTTGCAG 58.708 37.500 0.00 0.00 0.00 4.41
2412 4265 5.068987 AGCAGTTCCAATTTAGTTTTGCAGA 59.931 36.000 0.00 0.00 0.00 4.26
2413 4266 5.403466 GCAGTTCCAATTTAGTTTTGCAGAG 59.597 40.000 0.00 0.00 0.00 3.35
2414 4267 5.403466 CAGTTCCAATTTAGTTTTGCAGAGC 59.597 40.000 0.00 0.00 0.00 4.09
2415 4268 5.068987 AGTTCCAATTTAGTTTTGCAGAGCA 59.931 36.000 0.00 0.00 36.47 4.26
2416 4269 5.125100 TCCAATTTAGTTTTGCAGAGCAG 57.875 39.130 0.00 0.00 40.61 4.24
2417 4270 4.584325 TCCAATTTAGTTTTGCAGAGCAGT 59.416 37.500 0.00 0.00 40.61 4.40
2418 4271 5.068987 TCCAATTTAGTTTTGCAGAGCAGTT 59.931 36.000 0.00 0.00 40.61 3.16
2419 4272 5.754890 CCAATTTAGTTTTGCAGAGCAGTTT 59.245 36.000 0.00 0.00 40.61 2.66
2420 4273 6.258507 CCAATTTAGTTTTGCAGAGCAGTTTT 59.741 34.615 0.00 0.00 40.61 2.43
2421 4274 7.201635 CCAATTTAGTTTTGCAGAGCAGTTTTT 60.202 33.333 0.00 0.00 40.61 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 9.767684 CTTCATGCACAATAAAACTATACGAAA 57.232 29.630 0.00 0.00 0.00 3.46
15 16 8.394877 CCTTCATGCACAATAAAACTATACGAA 58.605 33.333 0.00 0.00 0.00 3.85
16 17 7.551262 ACCTTCATGCACAATAAAACTATACGA 59.449 33.333 0.00 0.00 0.00 3.43
17 18 7.639850 CACCTTCATGCACAATAAAACTATACG 59.360 37.037 0.00 0.00 0.00 3.06
18 19 7.432252 GCACCTTCATGCACAATAAAACTATAC 59.568 37.037 0.00 0.00 45.39 1.47
19 20 7.479980 GCACCTTCATGCACAATAAAACTATA 58.520 34.615 0.00 0.00 45.39 1.31
20 21 6.332630 GCACCTTCATGCACAATAAAACTAT 58.667 36.000 0.00 0.00 45.39 2.12
21 22 5.708948 GCACCTTCATGCACAATAAAACTA 58.291 37.500 0.00 0.00 45.39 2.24
22 23 4.559153 GCACCTTCATGCACAATAAAACT 58.441 39.130 0.00 0.00 45.39 2.66
23 24 4.908966 GCACCTTCATGCACAATAAAAC 57.091 40.909 0.00 0.00 45.39 2.43
33 34 4.708726 AGTGAAATAAGCACCTTCATGC 57.291 40.909 0.00 0.00 46.50 4.06
34 35 7.951530 AAAAAGTGAAATAAGCACCTTCATG 57.048 32.000 0.00 0.00 36.95 3.07
60 61 9.233649 ACAATATGAACACTAAACCGGAAATTA 57.766 29.630 9.46 3.59 0.00 1.40
61 62 8.026607 CACAATATGAACACTAAACCGGAAATT 58.973 33.333 9.46 2.37 0.00 1.82
62 63 7.535139 CACAATATGAACACTAAACCGGAAAT 58.465 34.615 9.46 0.00 0.00 2.17
63 64 6.568844 GCACAATATGAACACTAAACCGGAAA 60.569 38.462 9.46 0.00 0.00 3.13
64 65 5.106475 GCACAATATGAACACTAAACCGGAA 60.106 40.000 9.46 0.00 0.00 4.30
65 66 4.393680 GCACAATATGAACACTAAACCGGA 59.606 41.667 9.46 0.00 0.00 5.14
66 67 4.155099 TGCACAATATGAACACTAAACCGG 59.845 41.667 0.00 0.00 0.00 5.28
67 68 5.289917 TGCACAATATGAACACTAAACCG 57.710 39.130 0.00 0.00 0.00 4.44
68 69 5.965334 CGATGCACAATATGAACACTAAACC 59.035 40.000 0.00 0.00 0.00 3.27
69 70 6.542852 ACGATGCACAATATGAACACTAAAC 58.457 36.000 0.00 0.00 0.00 2.01
70 71 6.735678 ACGATGCACAATATGAACACTAAA 57.264 33.333 0.00 0.00 0.00 1.85
71 72 7.835634 TTACGATGCACAATATGAACACTAA 57.164 32.000 0.00 0.00 0.00 2.24
72 73 7.494298 ACATTACGATGCACAATATGAACACTA 59.506 33.333 0.00 0.00 36.72 2.74
73 74 6.316140 ACATTACGATGCACAATATGAACACT 59.684 34.615 0.00 0.00 36.72 3.55
74 75 6.411782 CACATTACGATGCACAATATGAACAC 59.588 38.462 0.00 0.00 36.72 3.32
75 76 6.458070 CCACATTACGATGCACAATATGAACA 60.458 38.462 0.00 0.00 36.72 3.18
76 77 5.909054 CCACATTACGATGCACAATATGAAC 59.091 40.000 0.00 0.00 36.72 3.18
77 78 5.505489 GCCACATTACGATGCACAATATGAA 60.505 40.000 0.00 0.00 36.72 2.57
78 79 4.024133 GCCACATTACGATGCACAATATGA 60.024 41.667 0.00 0.00 36.72 2.15
79 80 4.221342 GCCACATTACGATGCACAATATG 58.779 43.478 0.00 0.00 36.72 1.78
80 81 3.058983 CGCCACATTACGATGCACAATAT 60.059 43.478 0.00 0.00 36.72 1.28
81 82 2.286563 CGCCACATTACGATGCACAATA 59.713 45.455 0.00 0.00 36.72 1.90
82 83 1.063912 CGCCACATTACGATGCACAAT 59.936 47.619 0.00 0.00 36.72 2.71
83 84 0.445829 CGCCACATTACGATGCACAA 59.554 50.000 0.00 0.00 36.72 3.33
84 85 0.390472 TCGCCACATTACGATGCACA 60.390 50.000 0.00 0.00 36.72 4.57
85 86 0.724549 TTCGCCACATTACGATGCAC 59.275 50.000 0.00 0.00 38.25 4.57
86 87 1.443802 TTTCGCCACATTACGATGCA 58.556 45.000 0.00 0.00 38.25 3.96
87 88 2.535934 TTTTCGCCACATTACGATGC 57.464 45.000 0.00 0.00 38.25 3.91
88 89 5.092105 TGAATTTTTCGCCACATTACGATG 58.908 37.500 0.00 0.00 38.25 3.84
89 90 5.303747 TGAATTTTTCGCCACATTACGAT 57.696 34.783 0.00 0.00 38.25 3.73
90 91 4.750952 TGAATTTTTCGCCACATTACGA 57.249 36.364 0.00 0.00 36.32 3.43
91 92 4.201485 GCTTGAATTTTTCGCCACATTACG 60.201 41.667 0.00 0.00 0.00 3.18
92 93 4.091365 GGCTTGAATTTTTCGCCACATTAC 59.909 41.667 0.00 0.00 36.54 1.89
93 94 4.241681 GGCTTGAATTTTTCGCCACATTA 58.758 39.130 0.00 0.00 36.54 1.90
94 95 3.066380 GGCTTGAATTTTTCGCCACATT 58.934 40.909 0.00 0.00 36.54 2.71
95 96 2.036992 TGGCTTGAATTTTTCGCCACAT 59.963 40.909 7.37 0.00 39.98 3.21
96 97 1.410517 TGGCTTGAATTTTTCGCCACA 59.589 42.857 7.37 0.00 39.98 4.17
97 98 2.147436 TGGCTTGAATTTTTCGCCAC 57.853 45.000 7.37 0.00 39.98 5.01
98 99 4.527509 TTATGGCTTGAATTTTTCGCCA 57.472 36.364 12.14 12.14 45.76 5.69
99 100 4.929211 ACTTTATGGCTTGAATTTTTCGCC 59.071 37.500 0.00 0.00 36.90 5.54
100 101 7.612266 CATACTTTATGGCTTGAATTTTTCGC 58.388 34.615 0.00 0.00 32.55 4.70
115 116 9.123902 TCCTTCAAATGACATCCATACTTTATG 57.876 33.333 0.00 0.00 34.45 1.90
116 117 9.872684 ATCCTTCAAATGACATCCATACTTTAT 57.127 29.630 0.00 0.00 34.45 1.40
117 118 9.699410 AATCCTTCAAATGACATCCATACTTTA 57.301 29.630 0.00 0.00 34.45 1.85
118 119 8.599624 AATCCTTCAAATGACATCCATACTTT 57.400 30.769 0.00 0.00 34.45 2.66
119 120 7.835682 TGAATCCTTCAAATGACATCCATACTT 59.164 33.333 0.00 0.00 36.59 2.24
120 121 7.284034 GTGAATCCTTCAAATGACATCCATACT 59.716 37.037 0.00 0.00 42.15 2.12
121 122 7.420800 GTGAATCCTTCAAATGACATCCATAC 58.579 38.462 0.00 0.00 42.15 2.39
122 123 6.260714 CGTGAATCCTTCAAATGACATCCATA 59.739 38.462 0.00 0.00 42.15 2.74
123 124 5.066893 CGTGAATCCTTCAAATGACATCCAT 59.933 40.000 0.00 0.00 42.15 3.41
124 125 4.395854 CGTGAATCCTTCAAATGACATCCA 59.604 41.667 0.00 0.00 42.15 3.41
125 126 4.201950 CCGTGAATCCTTCAAATGACATCC 60.202 45.833 0.00 0.00 42.15 3.51
126 127 4.396166 ACCGTGAATCCTTCAAATGACATC 59.604 41.667 0.00 0.00 42.15 3.06
127 128 4.335416 ACCGTGAATCCTTCAAATGACAT 58.665 39.130 0.00 0.00 42.15 3.06
128 129 3.750371 ACCGTGAATCCTTCAAATGACA 58.250 40.909 0.00 0.00 42.15 3.58
129 130 4.023193 ACAACCGTGAATCCTTCAAATGAC 60.023 41.667 0.00 0.00 42.15 3.06
130 131 4.023279 CACAACCGTGAATCCTTCAAATGA 60.023 41.667 0.00 0.00 46.80 2.57
131 132 4.229096 CACAACCGTGAATCCTTCAAATG 58.771 43.478 0.00 0.00 46.80 2.32
132 133 3.255642 CCACAACCGTGAATCCTTCAAAT 59.744 43.478 0.00 0.00 46.80 2.32
133 134 2.621055 CCACAACCGTGAATCCTTCAAA 59.379 45.455 0.00 0.00 46.80 2.69
134 135 2.158740 TCCACAACCGTGAATCCTTCAA 60.159 45.455 0.00 0.00 46.80 2.69
135 136 1.418264 TCCACAACCGTGAATCCTTCA 59.582 47.619 0.00 0.00 46.80 3.02
136 137 2.178912 TCCACAACCGTGAATCCTTC 57.821 50.000 0.00 0.00 46.80 3.46
137 138 2.105821 TCTTCCACAACCGTGAATCCTT 59.894 45.455 0.00 0.00 46.80 3.36
138 139 1.697432 TCTTCCACAACCGTGAATCCT 59.303 47.619 0.00 0.00 46.80 3.24
139 140 1.804748 GTCTTCCACAACCGTGAATCC 59.195 52.381 0.00 0.00 46.80 3.01
140 141 2.767505 AGTCTTCCACAACCGTGAATC 58.232 47.619 0.00 0.00 46.80 2.52
141 142 2.930826 AGTCTTCCACAACCGTGAAT 57.069 45.000 0.00 0.00 46.80 2.57
142 143 3.385433 TCTTAGTCTTCCACAACCGTGAA 59.615 43.478 0.00 0.00 46.80 3.18
143 144 2.960384 TCTTAGTCTTCCACAACCGTGA 59.040 45.455 0.00 0.00 46.80 4.35
144 145 3.243771 ACTCTTAGTCTTCCACAACCGTG 60.244 47.826 0.00 0.00 43.21 4.94
145 146 2.963782 ACTCTTAGTCTTCCACAACCGT 59.036 45.455 0.00 0.00 0.00 4.83
146 147 3.662247 ACTCTTAGTCTTCCACAACCG 57.338 47.619 0.00 0.00 0.00 4.44
147 148 6.756221 TCTTAACTCTTAGTCTTCCACAACC 58.244 40.000 0.00 0.00 0.00 3.77
148 149 8.834749 AATCTTAACTCTTAGTCTTCCACAAC 57.165 34.615 0.00 0.00 0.00 3.32
153 154 9.974980 CCAGATAATCTTAACTCTTAGTCTTCC 57.025 37.037 0.00 0.00 0.00 3.46
172 173 9.489084 CCACGATCAATATTTAGAACCAGATAA 57.511 33.333 0.00 0.00 0.00 1.75
173 174 8.094548 CCCACGATCAATATTTAGAACCAGATA 58.905 37.037 0.00 0.00 0.00 1.98
174 175 6.936900 CCCACGATCAATATTTAGAACCAGAT 59.063 38.462 0.00 0.00 0.00 2.90
175 176 6.126883 ACCCACGATCAATATTTAGAACCAGA 60.127 38.462 0.00 0.00 0.00 3.86
176 177 6.055588 ACCCACGATCAATATTTAGAACCAG 58.944 40.000 0.00 0.00 0.00 4.00
177 178 5.996644 ACCCACGATCAATATTTAGAACCA 58.003 37.500 0.00 0.00 0.00 3.67
178 179 6.725246 CAACCCACGATCAATATTTAGAACC 58.275 40.000 0.00 0.00 0.00 3.62
179 180 6.199393 GCAACCCACGATCAATATTTAGAAC 58.801 40.000 0.00 0.00 0.00 3.01
180 181 5.298276 GGCAACCCACGATCAATATTTAGAA 59.702 40.000 0.00 0.00 0.00 2.10
181 182 4.819630 GGCAACCCACGATCAATATTTAGA 59.180 41.667 0.00 0.00 0.00 2.10
182 183 4.578516 TGGCAACCCACGATCAATATTTAG 59.421 41.667 0.00 0.00 35.79 1.85
183 184 4.527944 TGGCAACCCACGATCAATATTTA 58.472 39.130 0.00 0.00 35.79 1.40
184 185 3.360867 TGGCAACCCACGATCAATATTT 58.639 40.909 0.00 0.00 35.79 1.40
185 186 3.011566 TGGCAACCCACGATCAATATT 57.988 42.857 0.00 0.00 35.79 1.28
186 187 2.727123 TGGCAACCCACGATCAATAT 57.273 45.000 0.00 0.00 35.79 1.28
187 188 2.364632 CTTGGCAACCCACGATCAATA 58.635 47.619 0.00 0.00 41.97 1.90
188 189 1.176527 CTTGGCAACCCACGATCAAT 58.823 50.000 0.00 0.00 41.97 2.57
189 190 1.523154 GCTTGGCAACCCACGATCAA 61.523 55.000 0.00 0.00 41.97 2.57
190 191 1.971167 GCTTGGCAACCCACGATCA 60.971 57.895 0.00 0.00 41.97 2.92
191 192 1.648467 GAGCTTGGCAACCCACGATC 61.648 60.000 0.00 0.00 41.97 3.69
192 193 1.675641 GAGCTTGGCAACCCACGAT 60.676 57.895 0.00 0.00 41.97 3.73
193 194 2.281484 GAGCTTGGCAACCCACGA 60.281 61.111 0.00 0.00 41.97 4.35
194 195 2.594303 TGAGCTTGGCAACCCACG 60.594 61.111 0.00 0.00 41.97 4.94
195 196 1.518903 GACTGAGCTTGGCAACCCAC 61.519 60.000 0.00 0.00 41.97 4.61
196 197 1.228245 GACTGAGCTTGGCAACCCA 60.228 57.895 0.00 0.00 40.06 4.51
197 198 0.957888 GAGACTGAGCTTGGCAACCC 60.958 60.000 0.00 0.00 0.00 4.11
198 199 0.957888 GGAGACTGAGCTTGGCAACC 60.958 60.000 0.00 0.00 0.00 3.77
199 200 0.036022 AGGAGACTGAGCTTGGCAAC 59.964 55.000 0.00 0.00 41.13 4.17
200 201 0.322975 GAGGAGACTGAGCTTGGCAA 59.677 55.000 0.00 0.00 44.43 4.52
201 202 1.881903 CGAGGAGACTGAGCTTGGCA 61.882 60.000 0.00 0.00 44.43 4.92
202 203 1.153667 CGAGGAGACTGAGCTTGGC 60.154 63.158 0.00 0.00 44.43 4.52
203 204 1.464734 TACGAGGAGACTGAGCTTGG 58.535 55.000 0.00 0.00 44.43 3.61
204 205 3.577649 TTTACGAGGAGACTGAGCTTG 57.422 47.619 0.00 0.00 44.43 4.01
205 206 4.951094 AGTATTTACGAGGAGACTGAGCTT 59.049 41.667 0.00 0.00 44.43 3.74
206 207 4.528920 AGTATTTACGAGGAGACTGAGCT 58.471 43.478 0.00 0.00 44.43 4.09
207 208 4.261280 GGAGTATTTACGAGGAGACTGAGC 60.261 50.000 0.00 0.00 44.43 4.26
208 209 4.276431 GGGAGTATTTACGAGGAGACTGAG 59.724 50.000 0.00 0.00 44.43 3.35
209 210 4.079901 AGGGAGTATTTACGAGGAGACTGA 60.080 45.833 0.00 0.00 44.43 3.41
210 211 4.208746 AGGGAGTATTTACGAGGAGACTG 58.791 47.826 0.00 0.00 44.43 3.51
212 213 4.463070 AGAGGGAGTATTTACGAGGAGAC 58.537 47.826 0.00 0.00 0.00 3.36
213 214 4.792513 AGAGGGAGTATTTACGAGGAGA 57.207 45.455 0.00 0.00 0.00 3.71
214 215 5.241285 GGTTAGAGGGAGTATTTACGAGGAG 59.759 48.000 0.00 0.00 0.00 3.69
215 216 5.136105 GGTTAGAGGGAGTATTTACGAGGA 58.864 45.833 0.00 0.00 0.00 3.71
216 217 4.891756 TGGTTAGAGGGAGTATTTACGAGG 59.108 45.833 0.00 0.00 0.00 4.63
217 218 6.461110 TTGGTTAGAGGGAGTATTTACGAG 57.539 41.667 0.00 0.00 0.00 4.18
218 219 6.855763 TTTGGTTAGAGGGAGTATTTACGA 57.144 37.500 0.00 0.00 0.00 3.43
219 220 7.551617 ACATTTTGGTTAGAGGGAGTATTTACG 59.448 37.037 0.00 0.00 0.00 3.18
220 221 8.803397 ACATTTTGGTTAGAGGGAGTATTTAC 57.197 34.615 0.00 0.00 0.00 2.01
222 223 9.462606 CTTACATTTTGGTTAGAGGGAGTATTT 57.537 33.333 0.00 0.00 0.00 1.40
223 224 8.832735 TCTTACATTTTGGTTAGAGGGAGTATT 58.167 33.333 0.00 0.00 0.00 1.89
224 225 8.265764 GTCTTACATTTTGGTTAGAGGGAGTAT 58.734 37.037 0.00 0.00 28.13 2.12
225 226 7.456902 AGTCTTACATTTTGGTTAGAGGGAGTA 59.543 37.037 0.00 0.00 28.13 2.59
226 227 6.272558 AGTCTTACATTTTGGTTAGAGGGAGT 59.727 38.462 0.00 0.00 28.13 3.85
227 228 6.712276 AGTCTTACATTTTGGTTAGAGGGAG 58.288 40.000 0.00 0.00 28.13 4.30
228 229 6.697641 AGTCTTACATTTTGGTTAGAGGGA 57.302 37.500 0.00 0.00 28.13 4.20
229 230 7.761038 AAAGTCTTACATTTTGGTTAGAGGG 57.239 36.000 0.00 0.00 28.13 4.30
230 231 8.630037 ACAAAAGTCTTACATTTTGGTTAGAGG 58.370 33.333 13.20 0.00 46.04 3.69
232 233 9.796120 CAACAAAAGTCTTACATTTTGGTTAGA 57.204 29.630 13.20 0.00 42.18 2.10
233 234 9.030301 CCAACAAAAGTCTTACATTTTGGTTAG 57.970 33.333 13.20 0.00 42.18 2.34
234 235 8.532819 ACCAACAAAAGTCTTACATTTTGGTTA 58.467 29.630 13.20 0.00 42.18 2.85
235 236 7.390823 ACCAACAAAAGTCTTACATTTTGGTT 58.609 30.769 13.20 0.00 42.18 3.67
236 237 6.941857 ACCAACAAAAGTCTTACATTTTGGT 58.058 32.000 13.20 5.44 44.87 3.67
237 238 7.841915 AACCAACAAAAGTCTTACATTTTGG 57.158 32.000 13.20 0.00 46.04 3.28
238 239 9.540431 CAAAACCAACAAAAGTCTTACATTTTG 57.460 29.630 8.43 8.43 46.77 2.44
239 240 8.233868 GCAAAACCAACAAAAGTCTTACATTTT 58.766 29.630 0.00 0.00 0.00 1.82
240 241 7.389053 TGCAAAACCAACAAAAGTCTTACATTT 59.611 29.630 0.00 0.00 0.00 2.32
241 242 6.876257 TGCAAAACCAACAAAAGTCTTACATT 59.124 30.769 0.00 0.00 0.00 2.71
242 243 6.312672 GTGCAAAACCAACAAAAGTCTTACAT 59.687 34.615 0.00 0.00 0.00 2.29
243 244 5.635700 GTGCAAAACCAACAAAAGTCTTACA 59.364 36.000 0.00 0.00 0.00 2.41
244 245 5.635700 TGTGCAAAACCAACAAAAGTCTTAC 59.364 36.000 0.00 0.00 0.00 2.34
245 246 5.784177 TGTGCAAAACCAACAAAAGTCTTA 58.216 33.333 0.00 0.00 0.00 2.10
246 247 4.636249 TGTGCAAAACCAACAAAAGTCTT 58.364 34.783 0.00 0.00 0.00 3.01
247 248 4.244862 CTGTGCAAAACCAACAAAAGTCT 58.755 39.130 0.00 0.00 0.00 3.24
248 249 3.370672 CCTGTGCAAAACCAACAAAAGTC 59.629 43.478 0.00 0.00 0.00 3.01
249 250 3.333804 CCTGTGCAAAACCAACAAAAGT 58.666 40.909 0.00 0.00 0.00 2.66
250 251 2.677337 CCCTGTGCAAAACCAACAAAAG 59.323 45.455 0.00 0.00 0.00 2.27
251 252 2.704572 CCCTGTGCAAAACCAACAAAA 58.295 42.857 0.00 0.00 0.00 2.44
252 253 1.677217 GCCCTGTGCAAAACCAACAAA 60.677 47.619 0.00 0.00 40.77 2.83
253 254 0.107945 GCCCTGTGCAAAACCAACAA 60.108 50.000 0.00 0.00 40.77 2.83
254 255 1.519719 GCCCTGTGCAAAACCAACA 59.480 52.632 0.00 0.00 40.77 3.33
255 256 4.436515 GCCCTGTGCAAAACCAAC 57.563 55.556 0.00 0.00 40.77 3.77
264 265 2.068519 GTTGCTTTTTATGCCCTGTGC 58.931 47.619 0.00 0.00 41.77 4.57
265 266 3.665745 AGTTGCTTTTTATGCCCTGTG 57.334 42.857 0.00 0.00 0.00 3.66
266 267 4.586841 TGTAAGTTGCTTTTTATGCCCTGT 59.413 37.500 0.00 0.00 0.00 4.00
267 268 5.132897 TGTAAGTTGCTTTTTATGCCCTG 57.867 39.130 0.00 0.00 0.00 4.45
268 269 6.358974 AATGTAAGTTGCTTTTTATGCCCT 57.641 33.333 0.00 0.00 0.00 5.19
269 270 7.041440 ACAAAATGTAAGTTGCTTTTTATGCCC 60.041 33.333 14.30 0.00 0.00 5.36
270 271 7.860613 ACAAAATGTAAGTTGCTTTTTATGCC 58.139 30.769 14.30 0.00 0.00 4.40
274 275 9.784680 TCGTAACAAAATGTAAGTTGCTTTTTA 57.215 25.926 14.30 1.38 0.00 1.52
275 276 8.690680 TCGTAACAAAATGTAAGTTGCTTTTT 57.309 26.923 10.46 10.46 0.00 1.94
276 277 8.690680 TTCGTAACAAAATGTAAGTTGCTTTT 57.309 26.923 0.00 0.00 0.00 2.27
277 278 7.043656 GCTTCGTAACAAAATGTAAGTTGCTTT 60.044 33.333 0.00 0.00 0.00 3.51
278 279 6.416750 GCTTCGTAACAAAATGTAAGTTGCTT 59.583 34.615 0.00 0.00 0.00 3.91
279 280 5.912955 GCTTCGTAACAAAATGTAAGTTGCT 59.087 36.000 0.00 0.00 0.00 3.91
280 281 5.164320 CGCTTCGTAACAAAATGTAAGTTGC 60.164 40.000 0.00 0.00 0.00 4.17
281 282 6.130723 TCGCTTCGTAACAAAATGTAAGTTG 58.869 36.000 0.00 0.00 0.00 3.16
282 283 6.018507 ACTCGCTTCGTAACAAAATGTAAGTT 60.019 34.615 0.00 0.00 0.00 2.66
283 284 5.464389 ACTCGCTTCGTAACAAAATGTAAGT 59.536 36.000 0.00 0.00 0.00 2.24
284 285 5.912528 ACTCGCTTCGTAACAAAATGTAAG 58.087 37.500 0.00 0.00 0.00 2.34
285 286 5.910637 ACTCGCTTCGTAACAAAATGTAA 57.089 34.783 0.00 0.00 0.00 2.41
286 287 5.919707 TGTACTCGCTTCGTAACAAAATGTA 59.080 36.000 0.00 0.00 0.00 2.29
287 288 4.746115 TGTACTCGCTTCGTAACAAAATGT 59.254 37.500 0.00 0.00 0.00 2.71
288 289 5.258685 TGTACTCGCTTCGTAACAAAATG 57.741 39.130 0.00 0.00 0.00 2.32
289 290 7.116662 TGTTATGTACTCGCTTCGTAACAAAAT 59.883 33.333 0.00 0.00 39.20 1.82
290 291 6.420306 TGTTATGTACTCGCTTCGTAACAAAA 59.580 34.615 0.00 0.00 39.20 2.44
291 292 5.919707 TGTTATGTACTCGCTTCGTAACAAA 59.080 36.000 0.00 0.00 39.20 2.83
292 293 5.459768 TGTTATGTACTCGCTTCGTAACAA 58.540 37.500 0.00 0.00 39.20 2.83
293 294 5.045668 TGTTATGTACTCGCTTCGTAACA 57.954 39.130 0.00 0.00 39.57 2.41
294 295 5.108854 CGATGTTATGTACTCGCTTCGTAAC 60.109 44.000 0.00 0.00 35.44 2.50
295 296 4.965762 CGATGTTATGTACTCGCTTCGTAA 59.034 41.667 0.00 0.00 0.00 3.18
296 297 4.521010 CGATGTTATGTACTCGCTTCGTA 58.479 43.478 0.00 0.00 0.00 3.43
297 298 3.360533 CGATGTTATGTACTCGCTTCGT 58.639 45.455 0.00 0.00 0.00 3.85
298 299 2.719556 CCGATGTTATGTACTCGCTTCG 59.280 50.000 0.00 2.30 0.00 3.79
299 300 3.961182 TCCGATGTTATGTACTCGCTTC 58.039 45.455 0.00 0.00 0.00 3.86
300 301 4.097437 TCTTCCGATGTTATGTACTCGCTT 59.903 41.667 0.00 0.00 0.00 4.68
301 302 3.630769 TCTTCCGATGTTATGTACTCGCT 59.369 43.478 0.00 0.00 0.00 4.93
302 303 3.961182 TCTTCCGATGTTATGTACTCGC 58.039 45.455 0.00 0.00 0.00 5.03
303 304 6.900189 AGTATCTTCCGATGTTATGTACTCG 58.100 40.000 0.00 0.00 0.00 4.18
304 305 8.136165 ACAAGTATCTTCCGATGTTATGTACTC 58.864 37.037 0.00 0.00 0.00 2.59
305 306 8.008513 ACAAGTATCTTCCGATGTTATGTACT 57.991 34.615 0.00 0.00 0.00 2.73
306 307 7.113124 CGACAAGTATCTTCCGATGTTATGTAC 59.887 40.741 0.00 0.00 0.00 2.90
307 308 7.136772 CGACAAGTATCTTCCGATGTTATGTA 58.863 38.462 0.00 0.00 0.00 2.29
308 309 5.977725 CGACAAGTATCTTCCGATGTTATGT 59.022 40.000 0.00 0.00 0.00 2.29
309 310 5.977725 ACGACAAGTATCTTCCGATGTTATG 59.022 40.000 0.00 0.00 0.00 1.90
310 311 6.145338 ACGACAAGTATCTTCCGATGTTAT 57.855 37.500 0.00 0.00 0.00 1.89
311 312 5.571784 ACGACAAGTATCTTCCGATGTTA 57.428 39.130 0.00 0.00 0.00 2.41
312 313 4.451629 ACGACAAGTATCTTCCGATGTT 57.548 40.909 0.00 0.00 0.00 2.71
313 314 5.571784 TTACGACAAGTATCTTCCGATGT 57.428 39.130 0.00 0.00 34.88 3.06
314 315 5.977725 ACATTACGACAAGTATCTTCCGATG 59.022 40.000 0.00 0.00 34.88 3.84
315 316 6.145338 ACATTACGACAAGTATCTTCCGAT 57.855 37.500 0.00 0.00 34.88 4.18
316 317 5.449588 GGACATTACGACAAGTATCTTCCGA 60.450 44.000 0.00 0.00 34.88 4.55
317 318 4.738740 GGACATTACGACAAGTATCTTCCG 59.261 45.833 0.00 0.00 34.88 4.30
318 319 5.657474 TGGACATTACGACAAGTATCTTCC 58.343 41.667 0.00 0.00 34.88 3.46
319 320 6.588756 TGTTGGACATTACGACAAGTATCTTC 59.411 38.462 0.00 0.00 34.88 2.87
320 321 6.367969 GTGTTGGACATTACGACAAGTATCTT 59.632 38.462 0.00 0.00 34.23 2.40
321 322 5.867716 GTGTTGGACATTACGACAAGTATCT 59.132 40.000 0.00 0.00 34.23 1.98
322 323 5.220154 CGTGTTGGACATTACGACAAGTATC 60.220 44.000 0.00 0.00 38.72 2.24
323 324 4.624024 CGTGTTGGACATTACGACAAGTAT 59.376 41.667 0.00 0.00 38.72 2.12
324 325 3.982701 CGTGTTGGACATTACGACAAGTA 59.017 43.478 0.00 0.00 38.72 2.24
325 326 2.798283 CGTGTTGGACATTACGACAAGT 59.202 45.455 0.00 0.00 38.72 3.16
326 327 2.411031 GCGTGTTGGACATTACGACAAG 60.411 50.000 11.36 0.00 38.72 3.16
327 328 1.527736 GCGTGTTGGACATTACGACAA 59.472 47.619 11.36 0.00 38.72 3.18
328 329 1.141645 GCGTGTTGGACATTACGACA 58.858 50.000 11.36 0.00 38.72 4.35
329 330 1.126113 CAGCGTGTTGGACATTACGAC 59.874 52.381 11.36 4.92 38.72 4.34
330 331 1.000052 TCAGCGTGTTGGACATTACGA 60.000 47.619 11.36 0.00 38.72 3.43
331 332 1.390123 CTCAGCGTGTTGGACATTACG 59.610 52.381 0.00 0.00 39.37 3.18
332 333 1.128692 GCTCAGCGTGTTGGACATTAC 59.871 52.381 0.00 0.00 0.00 1.89
333 334 1.438651 GCTCAGCGTGTTGGACATTA 58.561 50.000 0.00 0.00 0.00 1.90
334 335 1.237285 GGCTCAGCGTGTTGGACATT 61.237 55.000 0.00 0.00 0.00 2.71
335 336 1.672356 GGCTCAGCGTGTTGGACAT 60.672 57.895 0.00 0.00 0.00 3.06
336 337 2.280797 GGCTCAGCGTGTTGGACA 60.281 61.111 0.00 0.00 0.00 4.02
337 338 1.639298 GATGGCTCAGCGTGTTGGAC 61.639 60.000 0.00 0.00 0.00 4.02
338 339 1.375908 GATGGCTCAGCGTGTTGGA 60.376 57.895 0.00 0.00 0.00 3.53
339 340 1.376424 AGATGGCTCAGCGTGTTGG 60.376 57.895 0.00 0.00 0.00 3.77
340 341 0.671472 TCAGATGGCTCAGCGTGTTG 60.671 55.000 0.00 0.00 0.00 3.33
341 342 0.390866 CTCAGATGGCTCAGCGTGTT 60.391 55.000 0.00 0.00 0.00 3.32
342 343 1.217511 CTCAGATGGCTCAGCGTGT 59.782 57.895 0.00 0.00 0.00 4.49
343 344 0.805322 GTCTCAGATGGCTCAGCGTG 60.805 60.000 0.00 0.00 0.00 5.34
344 345 1.253593 TGTCTCAGATGGCTCAGCGT 61.254 55.000 0.00 0.00 0.00 5.07
345 346 0.805322 GTGTCTCAGATGGCTCAGCG 60.805 60.000 0.00 0.00 0.00 5.18
346 347 0.461693 GGTGTCTCAGATGGCTCAGC 60.462 60.000 0.00 0.00 0.00 4.26
347 348 0.900421 TGGTGTCTCAGATGGCTCAG 59.100 55.000 0.00 0.00 0.00 3.35
348 349 1.277273 CTTGGTGTCTCAGATGGCTCA 59.723 52.381 0.00 0.00 0.00 4.26
349 350 1.406614 CCTTGGTGTCTCAGATGGCTC 60.407 57.143 0.00 0.00 0.00 4.70
350 351 0.617413 CCTTGGTGTCTCAGATGGCT 59.383 55.000 0.00 0.00 0.00 4.75
351 352 1.028868 GCCTTGGTGTCTCAGATGGC 61.029 60.000 0.00 0.00 0.00 4.40
352 353 0.617413 AGCCTTGGTGTCTCAGATGG 59.383 55.000 0.00 0.00 0.00 3.51
353 354 2.486472 AAGCCTTGGTGTCTCAGATG 57.514 50.000 0.00 0.00 0.00 2.90
354 355 3.521126 ACATAAGCCTTGGTGTCTCAGAT 59.479 43.478 0.00 0.00 0.00 2.90
355 356 2.906389 ACATAAGCCTTGGTGTCTCAGA 59.094 45.455 0.00 0.00 0.00 3.27
356 357 3.340814 ACATAAGCCTTGGTGTCTCAG 57.659 47.619 0.00 0.00 0.00 3.35
357 358 4.901197 TTACATAAGCCTTGGTGTCTCA 57.099 40.909 1.28 0.00 0.00 3.27
358 359 4.816925 GGATTACATAAGCCTTGGTGTCTC 59.183 45.833 0.00 1.60 38.65 3.36
359 360 4.781934 GGATTACATAAGCCTTGGTGTCT 58.218 43.478 0.00 0.00 38.65 3.41
368 369 5.582550 GTTTCTTGCAGGATTACATAAGCC 58.417 41.667 0.00 0.00 41.89 4.35
369 370 5.163754 ACGTTTCTTGCAGGATTACATAAGC 60.164 40.000 0.00 0.00 0.00 3.09
370 371 6.422776 ACGTTTCTTGCAGGATTACATAAG 57.577 37.500 0.00 0.00 0.00 1.73
371 372 7.908827 TTACGTTTCTTGCAGGATTACATAA 57.091 32.000 0.00 0.00 0.00 1.90
372 373 7.011950 CCATTACGTTTCTTGCAGGATTACATA 59.988 37.037 0.00 0.00 0.00 2.29
373 374 6.183360 CCATTACGTTTCTTGCAGGATTACAT 60.183 38.462 0.00 0.00 0.00 2.29
374 375 5.123186 CCATTACGTTTCTTGCAGGATTACA 59.877 40.000 0.00 0.00 0.00 2.41
375 376 5.353123 TCCATTACGTTTCTTGCAGGATTAC 59.647 40.000 0.00 0.46 0.00 1.89
376 377 5.492895 TCCATTACGTTTCTTGCAGGATTA 58.507 37.500 0.00 0.00 0.00 1.75
377 378 4.331968 TCCATTACGTTTCTTGCAGGATT 58.668 39.130 0.00 0.00 0.00 3.01
378 379 3.950397 TCCATTACGTTTCTTGCAGGAT 58.050 40.909 0.00 0.00 0.00 3.24
379 380 3.410631 TCCATTACGTTTCTTGCAGGA 57.589 42.857 0.00 0.00 0.00 3.86
380 381 4.497473 TTTCCATTACGTTTCTTGCAGG 57.503 40.909 0.00 0.00 0.00 4.85
381 382 5.942872 AGATTTCCATTACGTTTCTTGCAG 58.057 37.500 0.00 0.00 0.00 4.41
382 383 5.957842 AGATTTCCATTACGTTTCTTGCA 57.042 34.783 0.00 0.00 0.00 4.08
383 384 8.736751 TTTTAGATTTCCATTACGTTTCTTGC 57.263 30.769 0.00 0.00 0.00 4.01
385 386 9.687210 GGTTTTTAGATTTCCATTACGTTTCTT 57.313 29.630 0.00 0.00 0.00 2.52
386 387 8.852135 TGGTTTTTAGATTTCCATTACGTTTCT 58.148 29.630 0.00 0.00 0.00 2.52
387 388 8.908678 GTGGTTTTTAGATTTCCATTACGTTTC 58.091 33.333 0.00 0.00 0.00 2.78
388 389 8.635328 AGTGGTTTTTAGATTTCCATTACGTTT 58.365 29.630 0.00 0.00 0.00 3.60
389 390 8.173542 AGTGGTTTTTAGATTTCCATTACGTT 57.826 30.769 0.00 0.00 0.00 3.99
390 391 7.754851 AGTGGTTTTTAGATTTCCATTACGT 57.245 32.000 0.00 0.00 0.00 3.57
391 392 8.943002 ACTAGTGGTTTTTAGATTTCCATTACG 58.057 33.333 0.00 0.00 0.00 3.18
394 395 9.588096 AGAACTAGTGGTTTTTAGATTTCCATT 57.412 29.630 0.00 0.00 38.41 3.16
395 396 9.588096 AAGAACTAGTGGTTTTTAGATTTCCAT 57.412 29.630 0.00 0.00 38.41 3.41
396 397 8.990163 AAGAACTAGTGGTTTTTAGATTTCCA 57.010 30.769 0.00 0.00 38.41 3.53
399 400 9.569122 TGCTAAGAACTAGTGGTTTTTAGATTT 57.431 29.630 24.83 3.92 46.62 2.17
400 401 9.740710 ATGCTAAGAACTAGTGGTTTTTAGATT 57.259 29.630 24.83 13.07 46.62 2.40
401 402 9.167311 CATGCTAAGAACTAGTGGTTTTTAGAT 57.833 33.333 24.83 15.63 46.62 1.98
402 403 8.154856 ACATGCTAAGAACTAGTGGTTTTTAGA 58.845 33.333 24.83 14.52 46.62 2.10
403 404 8.324163 ACATGCTAAGAACTAGTGGTTTTTAG 57.676 34.615 19.39 19.39 46.51 1.85
404 405 8.685838 AACATGCTAAGAACTAGTGGTTTTTA 57.314 30.769 0.00 2.96 38.41 1.52
405 406 7.582667 AACATGCTAAGAACTAGTGGTTTTT 57.417 32.000 0.00 0.87 38.41 1.94
406 407 7.284489 TGAAACATGCTAAGAACTAGTGGTTTT 59.716 33.333 0.00 0.00 38.41 2.43
407 408 6.770785 TGAAACATGCTAAGAACTAGTGGTTT 59.229 34.615 0.00 0.00 38.41 3.27
408 409 6.204882 GTGAAACATGCTAAGAACTAGTGGTT 59.795 38.462 0.00 0.00 37.60 3.67
409 410 5.701290 GTGAAACATGCTAAGAACTAGTGGT 59.299 40.000 0.00 0.00 36.32 4.16
410 411 5.700832 TGTGAAACATGCTAAGAACTAGTGG 59.299 40.000 0.00 0.00 45.67 4.00
411 412 6.785488 TGTGAAACATGCTAAGAACTAGTG 57.215 37.500 0.00 0.00 45.67 2.74
426 427 8.370326 TTTTTGGTGAGAAAAACGTGTGAAACA 61.370 33.333 0.00 0.00 35.74 2.83
427 428 4.086199 TGGTGAGAAAAACGTGTGAAAC 57.914 40.909 0.00 0.00 37.35 2.78
428 429 4.768130 TTGGTGAGAAAAACGTGTGAAA 57.232 36.364 0.00 0.00 0.00 2.69
429 430 4.768130 TTTGGTGAGAAAAACGTGTGAA 57.232 36.364 0.00 0.00 0.00 3.18
430 431 4.768130 TTTTGGTGAGAAAAACGTGTGA 57.232 36.364 0.00 0.00 0.00 3.58
431 432 5.157781 TCTTTTTGGTGAGAAAAACGTGTG 58.842 37.500 0.00 0.00 32.63 3.82
432 433 5.379732 TCTTTTTGGTGAGAAAAACGTGT 57.620 34.783 0.00 0.00 32.63 4.49
433 434 6.529829 TGAATCTTTTTGGTGAGAAAAACGTG 59.470 34.615 0.00 0.00 32.63 4.49
434 435 6.626302 TGAATCTTTTTGGTGAGAAAAACGT 58.374 32.000 0.00 0.00 32.63 3.99
435 436 7.254084 CCTTGAATCTTTTTGGTGAGAAAAACG 60.254 37.037 0.00 0.00 32.63 3.60
436 437 7.011389 CCCTTGAATCTTTTTGGTGAGAAAAAC 59.989 37.037 0.00 0.00 32.63 2.43
437 438 7.047271 CCCTTGAATCTTTTTGGTGAGAAAAA 58.953 34.615 0.00 0.00 34.44 1.94
438 439 6.382570 TCCCTTGAATCTTTTTGGTGAGAAAA 59.617 34.615 0.00 0.00 0.00 2.29
439 440 5.896678 TCCCTTGAATCTTTTTGGTGAGAAA 59.103 36.000 0.00 0.00 0.00 2.52
440 441 5.454062 TCCCTTGAATCTTTTTGGTGAGAA 58.546 37.500 0.00 0.00 0.00 2.87
441 442 5.060427 TCCCTTGAATCTTTTTGGTGAGA 57.940 39.130 0.00 0.00 0.00 3.27
442 443 5.072741 TCTCCCTTGAATCTTTTTGGTGAG 58.927 41.667 0.00 0.00 0.00 3.51
443 444 5.060427 TCTCCCTTGAATCTTTTTGGTGA 57.940 39.130 0.00 0.00 0.00 4.02
444 445 4.219288 CCTCTCCCTTGAATCTTTTTGGTG 59.781 45.833 0.00 0.00 0.00 4.17
445 446 4.106341 TCCTCTCCCTTGAATCTTTTTGGT 59.894 41.667 0.00 0.00 0.00 3.67
446 447 4.666512 TCCTCTCCCTTGAATCTTTTTGG 58.333 43.478 0.00 0.00 0.00 3.28
447 448 6.655078 TTTCCTCTCCCTTGAATCTTTTTG 57.345 37.500 0.00 0.00 0.00 2.44
448 449 7.862274 AATTTCCTCTCCCTTGAATCTTTTT 57.138 32.000 0.00 0.00 0.00 1.94
449 450 7.862274 AAATTTCCTCTCCCTTGAATCTTTT 57.138 32.000 0.00 0.00 0.00 2.27
490 491 9.988350 CTCTTTTCTTTTGCATGTACGTAATAT 57.012 29.630 0.00 0.00 0.00 1.28
491 492 8.447833 CCTCTTTTCTTTTGCATGTACGTAATA 58.552 33.333 0.00 0.00 0.00 0.98
492 493 7.174253 TCCTCTTTTCTTTTGCATGTACGTAAT 59.826 33.333 0.00 0.00 0.00 1.89
493 494 6.483974 TCCTCTTTTCTTTTGCATGTACGTAA 59.516 34.615 0.00 0.00 0.00 3.18
494 495 5.992829 TCCTCTTTTCTTTTGCATGTACGTA 59.007 36.000 0.00 0.00 0.00 3.57
495 496 4.819630 TCCTCTTTTCTTTTGCATGTACGT 59.180 37.500 0.00 0.00 0.00 3.57
496 497 5.356882 TCCTCTTTTCTTTTGCATGTACG 57.643 39.130 0.00 0.00 0.00 3.67
497 498 8.593492 AATTTCCTCTTTTCTTTTGCATGTAC 57.407 30.769 0.00 0.00 0.00 2.90
498 499 9.260002 GAAATTTCCTCTTTTCTTTTGCATGTA 57.740 29.630 6.95 0.00 0.00 2.29
499 500 7.989170 AGAAATTTCCTCTTTTCTTTTGCATGT 59.011 29.630 14.61 0.00 38.67 3.21
500 501 8.374327 AGAAATTTCCTCTTTTCTTTTGCATG 57.626 30.769 14.61 0.00 38.67 4.06
509 510 9.958234 GGATGCTATTAGAAATTTCCTCTTTTC 57.042 33.333 14.61 3.46 33.08 2.29
510 511 9.479549 TGGATGCTATTAGAAATTTCCTCTTTT 57.520 29.630 14.61 0.00 0.00 2.27
511 512 8.907885 GTGGATGCTATTAGAAATTTCCTCTTT 58.092 33.333 14.61 0.00 0.00 2.52
512 513 7.503902 GGTGGATGCTATTAGAAATTTCCTCTT 59.496 37.037 14.61 0.00 0.00 2.85
513 514 7.001073 GGTGGATGCTATTAGAAATTTCCTCT 58.999 38.462 14.61 0.00 0.00 3.69
514 515 6.073003 CGGTGGATGCTATTAGAAATTTCCTC 60.073 42.308 14.61 0.00 0.00 3.71
515 516 5.765182 CGGTGGATGCTATTAGAAATTTCCT 59.235 40.000 14.61 5.15 0.00 3.36
516 517 5.531287 ACGGTGGATGCTATTAGAAATTTCC 59.469 40.000 14.61 0.00 0.00 3.13
517 518 6.430451 CACGGTGGATGCTATTAGAAATTTC 58.570 40.000 10.33 10.33 0.00 2.17
518 519 5.221048 GCACGGTGGATGCTATTAGAAATTT 60.221 40.000 10.60 0.00 40.08 1.82
519 520 4.275936 GCACGGTGGATGCTATTAGAAATT 59.724 41.667 10.60 0.00 40.08 1.82
520 521 3.815401 GCACGGTGGATGCTATTAGAAAT 59.185 43.478 10.60 0.00 40.08 2.17
521 522 3.202906 GCACGGTGGATGCTATTAGAAA 58.797 45.455 10.60 0.00 40.08 2.52
522 523 2.833794 GCACGGTGGATGCTATTAGAA 58.166 47.619 10.60 0.00 40.08 2.10
523 524 2.526304 GCACGGTGGATGCTATTAGA 57.474 50.000 10.60 0.00 40.08 2.10
530 531 0.953471 TGTAACAGCACGGTGGATGC 60.953 55.000 10.60 0.00 43.74 3.91
531 532 1.398041 CATGTAACAGCACGGTGGATG 59.602 52.381 10.60 2.49 0.00 3.51
532 533 1.003118 ACATGTAACAGCACGGTGGAT 59.997 47.619 10.60 0.00 0.00 3.41
533 534 0.394938 ACATGTAACAGCACGGTGGA 59.605 50.000 10.60 0.00 0.00 4.02
534 535 0.796312 GACATGTAACAGCACGGTGG 59.204 55.000 10.60 0.00 0.00 4.61
535 536 1.507562 TGACATGTAACAGCACGGTG 58.492 50.000 0.00 3.15 0.00 4.94
536 537 2.472695 ATGACATGTAACAGCACGGT 57.527 45.000 0.00 0.00 0.00 4.83
537 538 3.248363 CCATATGACATGTAACAGCACGG 59.752 47.826 3.65 0.00 0.00 4.94
538 539 4.119136 TCCATATGACATGTAACAGCACG 58.881 43.478 3.65 0.00 0.00 5.34
539 540 6.624352 AATCCATATGACATGTAACAGCAC 57.376 37.500 3.65 0.00 0.00 4.40
540 541 7.643569 AAAATCCATATGACATGTAACAGCA 57.356 32.000 3.65 0.00 0.00 4.41
577 578 9.685276 TGTAAACTCAGATCCATATGACATTTT 57.315 29.630 3.65 0.00 0.00 1.82
578 579 9.857656 ATGTAAACTCAGATCCATATGACATTT 57.142 29.630 3.65 0.00 0.00 2.32
618 619 3.368495 GTCAACAAATGAAACCACCGAC 58.632 45.455 0.00 0.00 40.50 4.79
620 621 2.544903 GGGTCAACAAATGAAACCACCG 60.545 50.000 0.00 0.00 40.50 4.94
621 622 2.432510 TGGGTCAACAAATGAAACCACC 59.567 45.455 0.00 0.00 40.50 4.61
683 687 0.758123 CAGCAAAGCCAGGGGAAAAA 59.242 50.000 0.00 0.00 0.00 1.94
684 688 1.120795 CCAGCAAAGCCAGGGGAAAA 61.121 55.000 0.00 0.00 0.00 2.29
685 689 1.533753 CCAGCAAAGCCAGGGGAAA 60.534 57.895 0.00 0.00 0.00 3.13
699 710 4.040445 TGTTGCAAAACTAGAAACCAGC 57.960 40.909 0.00 0.00 0.00 4.85
700 711 6.959671 TTTTGTTGCAAAACTAGAAACCAG 57.040 33.333 0.00 0.00 0.00 4.00
760 784 3.380004 TCAATGCTTTTGTCAACCGAAGT 59.620 39.130 0.00 0.00 0.00 3.01
765 789 3.451141 TGGTCAATGCTTTTGTCAACC 57.549 42.857 0.00 0.00 0.00 3.77
777 801 3.196254 CCCTTCCTTCCATTTGGTCAATG 59.804 47.826 0.00 0.00 41.99 2.82
785 809 0.967380 CTGCGCCCTTCCTTCCATTT 60.967 55.000 4.18 0.00 0.00 2.32
790 814 3.659089 TACGCTGCGCCCTTCCTTC 62.659 63.158 23.51 0.00 0.00 3.46
929 955 2.616510 GGGAGAGTGTTTGGTGATGAGG 60.617 54.545 0.00 0.00 0.00 3.86
1606 1767 3.018856 CTCCATAGCACTGCAAAATCCA 58.981 45.455 3.30 0.00 0.00 3.41
1607 1768 3.019564 ACTCCATAGCACTGCAAAATCC 58.980 45.455 3.30 0.00 0.00 3.01
1698 1867 4.284234 AGCTTGCAACCAATTACAGGAAAT 59.716 37.500 0.00 0.00 0.00 2.17
1702 1871 2.557924 TCAGCTTGCAACCAATTACAGG 59.442 45.455 0.00 0.00 0.00 4.00
1705 1874 4.503741 TCTTCAGCTTGCAACCAATTAC 57.496 40.909 0.00 0.00 0.00 1.89
1708 1877 3.493176 GGTTTCTTCAGCTTGCAACCAAT 60.493 43.478 0.00 0.00 34.87 3.16
1711 1880 1.600413 CGGTTTCTTCAGCTTGCAACC 60.600 52.381 0.00 0.00 0.00 3.77
1740 1982 4.422057 TGAACTCATACTACAGGTTGGGA 58.578 43.478 0.00 0.00 0.00 4.37
1792 2057 4.907582 GTGAAACGTTGGCATTTGTAGTAC 59.092 41.667 0.00 0.00 0.00 2.73
1793 2058 4.023878 GGTGAAACGTTGGCATTTGTAGTA 60.024 41.667 0.00 0.00 38.12 1.82
1794 2059 3.243267 GGTGAAACGTTGGCATTTGTAGT 60.243 43.478 0.00 0.00 38.12 2.73
1795 2060 3.004315 AGGTGAAACGTTGGCATTTGTAG 59.996 43.478 0.00 0.00 38.12 2.74
1796 2061 2.952978 AGGTGAAACGTTGGCATTTGTA 59.047 40.909 0.00 0.00 38.12 2.41
1797 2062 1.754226 AGGTGAAACGTTGGCATTTGT 59.246 42.857 0.00 0.00 38.12 2.83
1879 2146 4.500035 GGCGACAACCAATTACAGGAAAAA 60.500 41.667 0.00 0.00 0.00 1.94
1952 2226 7.004555 TGGCTTTCACTAGTCTTTCTATTCA 57.995 36.000 0.00 0.00 0.00 2.57
1953 2227 7.100409 ACTGGCTTTCACTAGTCTTTCTATTC 58.900 38.462 0.00 0.00 0.00 1.75
1986 3198 3.274288 GGGATGCTCCTTGACTTGTTAG 58.726 50.000 2.79 0.00 36.57 2.34
2029 3241 7.871973 CAGATCCTAAATTCCAGTGTATCTGAG 59.128 40.741 0.00 0.00 46.27 3.35
2075 3294 2.486951 CTGCATAAGCTGGACATTGC 57.513 50.000 0.00 0.00 42.74 3.56
2160 3379 5.413833 CAGAGATGTGCAACTGAACCTATTT 59.586 40.000 0.00 0.00 38.04 1.40
2165 3384 2.771089 TCAGAGATGTGCAACTGAACC 58.229 47.619 0.00 0.00 36.63 3.62
2208 3427 2.762327 CCCAAACTGCAGGCTATCAATT 59.238 45.455 19.93 0.00 0.00 2.32
2317 4170 3.137544 TCTTCAAAAGCTGTACCCCTTCA 59.862 43.478 0.00 0.00 0.00 3.02
2327 4180 7.223387 GCCCATTTGTATATTCTTCAAAAGCTG 59.777 37.037 0.00 0.00 35.28 4.24
2329 4182 7.041107 TGCCCATTTGTATATTCTTCAAAAGC 58.959 34.615 0.00 0.00 35.28 3.51
2377 4230 1.354031 TGGAACTGCTCTGCCCATTTA 59.646 47.619 0.00 0.00 0.00 1.40
2420 4273 9.377312 ACTGCTCTGCAAAATTAGTTTTTAAAA 57.623 25.926 0.00 0.00 38.41 1.52
2421 4274 8.940768 ACTGCTCTGCAAAATTAGTTTTTAAA 57.059 26.923 0.00 0.00 38.41 1.52
2422 4275 8.940768 AACTGCTCTGCAAAATTAGTTTTTAA 57.059 26.923 0.00 0.00 38.41 1.52
2423 4276 9.677567 CTAACTGCTCTGCAAAATTAGTTTTTA 57.322 29.630 7.89 0.00 38.41 1.52
2424 4277 7.169813 GCTAACTGCTCTGCAAAATTAGTTTTT 59.830 33.333 14.02 0.00 38.41 1.94
2425 4278 6.642540 GCTAACTGCTCTGCAAAATTAGTTTT 59.357 34.615 14.02 0.00 38.41 2.43
2426 4279 6.152379 GCTAACTGCTCTGCAAAATTAGTTT 58.848 36.000 14.02 0.00 38.41 2.66
2427 4280 5.241506 TGCTAACTGCTCTGCAAAATTAGTT 59.758 36.000 14.02 7.76 43.37 2.24
2428 4281 4.761739 TGCTAACTGCTCTGCAAAATTAGT 59.238 37.500 14.02 0.00 43.37 2.24
2429 4282 5.300969 TGCTAACTGCTCTGCAAAATTAG 57.699 39.130 10.77 10.77 43.37 1.73
2430 4283 5.241506 ACTTGCTAACTGCTCTGCAAAATTA 59.758 36.000 0.00 0.00 43.45 1.40
2431 4284 4.038402 ACTTGCTAACTGCTCTGCAAAATT 59.962 37.500 0.00 0.00 43.45 1.82
2432 4285 3.571401 ACTTGCTAACTGCTCTGCAAAAT 59.429 39.130 0.00 0.00 43.45 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.