Multiple sequence alignment - TraesCS5B01G448300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G448300 chr5B 100.000 2926 0 0 1 2926 620584592 620581667 0.000000e+00 5404.0
1 TraesCS5B01G448300 chr5B 80.166 1326 206 36 823 2125 622989864 622988573 0.000000e+00 939.0
2 TraesCS5B01G448300 chr5B 81.501 1146 180 25 993 2125 633298777 633299903 0.000000e+00 913.0
3 TraesCS5B01G448300 chr5B 77.965 1248 185 58 924 2125 633286669 633287872 0.000000e+00 699.0
4 TraesCS5B01G448300 chr5B 76.744 1247 203 53 924 2125 623114803 623113599 1.490000e-172 616.0
5 TraesCS5B01G448300 chr5B 78.935 845 143 23 1297 2125 623102672 623101847 2.560000e-150 542.0
6 TraesCS5B01G448300 chr5B 82.658 444 56 10 899 1330 623118101 623117667 9.900000e-100 374.0
7 TraesCS5B01G448300 chr5B 82.658 444 56 10 899 1330 626786033 626785599 9.900000e-100 374.0
8 TraesCS5B01G448300 chr5B 82.658 444 56 10 899 1330 629854030 629853596 9.900000e-100 374.0
9 TraesCS5B01G448300 chr5B 77.800 491 71 17 1055 1514 638678059 638678542 4.810000e-68 268.0
10 TraesCS5B01G448300 chr5B 81.481 135 24 1 2331 2464 626427697 626427831 3.080000e-20 110.0
11 TraesCS5B01G448300 chr5B 98.000 50 1 0 2172 2221 92216248 92216199 1.440000e-13 87.9
12 TraesCS5B01G448300 chr2B 94.452 703 37 2 1 701 82858951 82859653 0.000000e+00 1081.0
13 TraesCS5B01G448300 chr2B 87.642 704 81 5 2 701 547050543 547049842 0.000000e+00 813.0
14 TraesCS5B01G448300 chr3B 94.160 702 40 1 1 701 811551159 811550458 0.000000e+00 1068.0
15 TraesCS5B01G448300 chr3B 93.901 705 42 1 1 704 55465933 55465229 0.000000e+00 1062.0
16 TraesCS5B01G448300 chr3B 93.741 703 41 3 1 701 718845307 718846008 0.000000e+00 1051.0
17 TraesCS5B01G448300 chr3B 86.932 704 86 5 2 701 663073935 663073234 0.000000e+00 785.0
18 TraesCS5B01G448300 chr3B 75.091 550 102 18 997 1526 462100065 462099531 1.060000e-54 224.0
19 TraesCS5B01G448300 chr7B 92.888 703 48 2 1 701 64628561 64629263 0.000000e+00 1020.0
20 TraesCS5B01G448300 chr6B 91.013 701 62 1 1 700 658738829 658739529 0.000000e+00 944.0
21 TraesCS5B01G448300 chr5A 81.196 1154 184 22 993 2125 625920789 625921930 0.000000e+00 898.0
22 TraesCS5B01G448300 chr5A 79.004 843 135 29 1297 2120 625767038 625767857 3.320000e-149 538.0
23 TraesCS5B01G448300 chr5A 81.992 472 74 7 1055 1522 629372518 629372982 9.830000e-105 390.0
24 TraesCS5B01G448300 chr5A 81.529 471 78 5 1055 1522 629250496 629250032 2.130000e-101 379.0
25 TraesCS5B01G448300 chr5A 81.618 136 22 3 2331 2464 626512592 626512726 3.080000e-20 110.0
26 TraesCS5B01G448300 chr5A 81.618 136 22 3 2331 2464 626608712 626608846 3.080000e-20 110.0
27 TraesCS5B01G448300 chr5A 81.481 135 24 1 2331 2464 627667148 627667282 3.080000e-20 110.0
28 TraesCS5B01G448300 chr5A 81.481 135 24 1 2331 2464 627786394 627786528 3.080000e-20 110.0
29 TraesCS5B01G448300 chr3A 89.744 702 69 3 2 701 697066855 697066155 0.000000e+00 894.0
30 TraesCS5B01G448300 chr5D 80.932 944 153 24 1191 2125 501360864 501359939 0.000000e+00 721.0
31 TraesCS5B01G448300 chr5D 79.882 845 135 23 1297 2125 471545698 471546523 1.170000e-163 586.0
32 TraesCS5B01G448300 chr5D 79.882 845 135 23 1297 2125 471633249 471634074 1.170000e-163 586.0
33 TraesCS5B01G448300 chr5D 79.787 846 133 26 1297 2125 471706883 471707707 5.440000e-162 580.0
34 TraesCS5B01G448300 chr5D 79.196 846 137 27 1298 2125 501397129 501396305 4.260000e-153 551.0
35 TraesCS5B01G448300 chr5D 74.532 1174 210 43 986 2125 501440328 501439210 2.080000e-116 429.0
36 TraesCS5B01G448300 chr5D 80.674 445 63 9 899 1330 501864406 501863972 1.010000e-84 324.0
37 TraesCS5B01G448300 chr5D 90.909 88 7 1 2219 2306 501823316 501823230 1.840000e-22 117.0
38 TraesCS5B01G448300 chr5D 90.909 88 7 1 2219 2306 501863021 501862935 1.840000e-22 117.0
39 TraesCS5B01G448300 chr5D 81.481 135 24 1 2331 2464 296451594 296451728 3.080000e-20 110.0
40 TraesCS5B01G448300 chr5D 81.481 135 24 1 2331 2464 296476305 296476439 3.080000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G448300 chr5B 620581667 620584592 2925 True 5404.0 5404 100.0000 1 2926 1 chr5B.!!$R2 2925
1 TraesCS5B01G448300 chr5B 622988573 622989864 1291 True 939.0 939 80.1660 823 2125 1 chr5B.!!$R3 1302
2 TraesCS5B01G448300 chr5B 633298777 633299903 1126 False 913.0 913 81.5010 993 2125 1 chr5B.!!$F3 1132
3 TraesCS5B01G448300 chr5B 633286669 633287872 1203 False 699.0 699 77.9650 924 2125 1 chr5B.!!$F2 1201
4 TraesCS5B01G448300 chr5B 623101847 623102672 825 True 542.0 542 78.9350 1297 2125 1 chr5B.!!$R4 828
5 TraesCS5B01G448300 chr5B 623113599 623118101 4502 True 495.0 616 79.7010 899 2125 2 chr5B.!!$R7 1226
6 TraesCS5B01G448300 chr2B 82858951 82859653 702 False 1081.0 1081 94.4520 1 701 1 chr2B.!!$F1 700
7 TraesCS5B01G448300 chr2B 547049842 547050543 701 True 813.0 813 87.6420 2 701 1 chr2B.!!$R1 699
8 TraesCS5B01G448300 chr3B 811550458 811551159 701 True 1068.0 1068 94.1600 1 701 1 chr3B.!!$R4 700
9 TraesCS5B01G448300 chr3B 55465229 55465933 704 True 1062.0 1062 93.9010 1 704 1 chr3B.!!$R1 703
10 TraesCS5B01G448300 chr3B 718845307 718846008 701 False 1051.0 1051 93.7410 1 701 1 chr3B.!!$F1 700
11 TraesCS5B01G448300 chr3B 663073234 663073935 701 True 785.0 785 86.9320 2 701 1 chr3B.!!$R3 699
12 TraesCS5B01G448300 chr3B 462099531 462100065 534 True 224.0 224 75.0910 997 1526 1 chr3B.!!$R2 529
13 TraesCS5B01G448300 chr7B 64628561 64629263 702 False 1020.0 1020 92.8880 1 701 1 chr7B.!!$F1 700
14 TraesCS5B01G448300 chr6B 658738829 658739529 700 False 944.0 944 91.0130 1 700 1 chr6B.!!$F1 699
15 TraesCS5B01G448300 chr5A 625920789 625921930 1141 False 898.0 898 81.1960 993 2125 1 chr5A.!!$F2 1132
16 TraesCS5B01G448300 chr5A 625767038 625767857 819 False 538.0 538 79.0040 1297 2120 1 chr5A.!!$F1 823
17 TraesCS5B01G448300 chr3A 697066155 697066855 700 True 894.0 894 89.7440 2 701 1 chr3A.!!$R1 699
18 TraesCS5B01G448300 chr5D 501359939 501360864 925 True 721.0 721 80.9320 1191 2125 1 chr5D.!!$R1 934
19 TraesCS5B01G448300 chr5D 471545698 471546523 825 False 586.0 586 79.8820 1297 2125 1 chr5D.!!$F3 828
20 TraesCS5B01G448300 chr5D 471633249 471634074 825 False 586.0 586 79.8820 1297 2125 1 chr5D.!!$F4 828
21 TraesCS5B01G448300 chr5D 471706883 471707707 824 False 580.0 580 79.7870 1297 2125 1 chr5D.!!$F5 828
22 TraesCS5B01G448300 chr5D 501396305 501397129 824 True 551.0 551 79.1960 1298 2125 1 chr5D.!!$R2 827
23 TraesCS5B01G448300 chr5D 501439210 501440328 1118 True 429.0 429 74.5320 986 2125 1 chr5D.!!$R3 1139
24 TraesCS5B01G448300 chr5D 501862935 501864406 1471 True 220.5 324 85.7915 899 2306 2 chr5D.!!$R5 1407

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 748 0.176219 CCATACGGTACCGAAAGCCA 59.824 55.0 39.52 16.84 42.83 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2189 2415 0.178953 AACTGGGCATGGTGAGCTTT 60.179 50.0 0.0 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
239 241 4.168291 GGCTCCTTCCAGGCCGAG 62.168 72.222 0.00 0.00 36.37 4.63
320 322 7.395190 TGCAGCTTACAGATATGTTTTTCAT 57.605 32.000 0.00 0.00 40.25 2.57
382 384 1.586028 GCATGACGTTGGCCATTGT 59.414 52.632 6.09 8.46 0.00 2.71
389 391 1.794151 CGTTGGCCATTGTGCACTCA 61.794 55.000 19.41 4.97 0.00 3.41
416 418 1.933853 CCGGTGATTCTTCAATCGGAC 59.066 52.381 11.27 0.00 45.86 4.79
508 510 6.640518 TGGAGATCAAACACTTATCTGGTAC 58.359 40.000 0.00 0.00 30.19 3.34
541 543 3.299340 TCCTCAGAAACTTAGTCGTGC 57.701 47.619 0.00 0.00 0.00 5.34
542 544 1.986378 CCTCAGAAACTTAGTCGTGCG 59.014 52.381 0.00 0.00 0.00 5.34
578 580 2.545952 CGATCGGCTGGCAAACTATAGT 60.546 50.000 7.38 0.00 0.00 2.12
582 584 2.629051 GGCTGGCAAACTATAGTCGTT 58.371 47.619 5.70 0.00 0.00 3.85
651 653 0.318762 GGATGTATGGCCTCTCGACC 59.681 60.000 3.32 0.00 0.00 4.79
738 740 7.812690 AAAAATTAGAATCCCATACGGTACC 57.187 36.000 0.16 0.16 0.00 3.34
739 741 4.796038 ATTAGAATCCCATACGGTACCG 57.204 45.455 32.22 32.22 46.03 4.02
740 742 2.369983 AGAATCCCATACGGTACCGA 57.630 50.000 39.52 23.13 42.83 4.69
741 743 2.669781 AGAATCCCATACGGTACCGAA 58.330 47.619 39.52 17.13 42.83 4.30
742 744 3.033184 AGAATCCCATACGGTACCGAAA 58.967 45.455 39.52 26.18 42.83 3.46
743 745 3.069158 AGAATCCCATACGGTACCGAAAG 59.931 47.826 39.52 25.32 42.83 2.62
744 746 0.461135 TCCCATACGGTACCGAAAGC 59.539 55.000 39.52 0.00 42.83 3.51
745 747 0.531311 CCCATACGGTACCGAAAGCC 60.531 60.000 39.52 0.00 42.83 4.35
746 748 0.176219 CCATACGGTACCGAAAGCCA 59.824 55.000 39.52 16.84 42.83 4.75
747 749 1.405797 CCATACGGTACCGAAAGCCAA 60.406 52.381 39.52 15.47 42.83 4.52
748 750 2.348660 CATACGGTACCGAAAGCCAAA 58.651 47.619 39.52 14.14 42.83 3.28
749 751 2.540265 TACGGTACCGAAAGCCAAAA 57.460 45.000 39.52 10.51 42.83 2.44
750 752 1.677942 ACGGTACCGAAAGCCAAAAA 58.322 45.000 39.52 0.00 42.83 1.94
751 753 2.232399 ACGGTACCGAAAGCCAAAAAT 58.768 42.857 39.52 10.68 42.83 1.82
752 754 2.227149 ACGGTACCGAAAGCCAAAAATC 59.773 45.455 39.52 0.00 42.83 2.17
753 755 2.226912 CGGTACCGAAAGCCAAAAATCA 59.773 45.455 30.64 0.00 42.83 2.57
754 756 3.119637 CGGTACCGAAAGCCAAAAATCAT 60.120 43.478 30.64 0.00 42.83 2.45
755 757 4.095185 CGGTACCGAAAGCCAAAAATCATA 59.905 41.667 30.64 0.00 42.83 2.15
756 758 5.392165 CGGTACCGAAAGCCAAAAATCATAA 60.392 40.000 30.64 0.00 42.83 1.90
757 759 6.391537 GGTACCGAAAGCCAAAAATCATAAA 58.608 36.000 0.00 0.00 0.00 1.40
758 760 6.869388 GGTACCGAAAGCCAAAAATCATAAAA 59.131 34.615 0.00 0.00 0.00 1.52
759 761 7.547722 GGTACCGAAAGCCAAAAATCATAAAAT 59.452 33.333 0.00 0.00 0.00 1.82
760 762 7.977789 ACCGAAAGCCAAAAATCATAAAATT 57.022 28.000 0.00 0.00 0.00 1.82
761 763 7.805700 ACCGAAAGCCAAAAATCATAAAATTG 58.194 30.769 0.00 0.00 0.00 2.32
762 764 7.094848 ACCGAAAGCCAAAAATCATAAAATTGG 60.095 33.333 0.00 0.00 42.68 3.16
763 765 7.094848 CCGAAAGCCAAAAATCATAAAATTGGT 60.095 33.333 4.92 0.00 41.98 3.67
764 766 8.288913 CGAAAGCCAAAAATCATAAAATTGGTT 58.711 29.630 4.92 0.00 41.98 3.67
765 767 9.964303 GAAAGCCAAAAATCATAAAATTGGTTT 57.036 25.926 4.92 2.44 43.50 3.27
773 775 9.964303 AAAATCATAAAATTGGTTTTTGGCTTC 57.036 25.926 0.00 0.00 36.72 3.86
774 776 6.777526 TCATAAAATTGGTTTTTGGCTTCG 57.222 33.333 0.00 0.00 38.03 3.79
775 777 5.698545 TCATAAAATTGGTTTTTGGCTTCGG 59.301 36.000 0.00 0.00 38.03 4.30
776 778 3.552132 AAATTGGTTTTTGGCTTCGGT 57.448 38.095 0.00 0.00 0.00 4.69
777 779 3.552132 AATTGGTTTTTGGCTTCGGTT 57.448 38.095 0.00 0.00 0.00 4.44
778 780 3.552132 ATTGGTTTTTGGCTTCGGTTT 57.448 38.095 0.00 0.00 0.00 3.27
779 781 3.336138 TTGGTTTTTGGCTTCGGTTTT 57.664 38.095 0.00 0.00 0.00 2.43
780 782 4.467198 TTGGTTTTTGGCTTCGGTTTTA 57.533 36.364 0.00 0.00 0.00 1.52
781 783 3.783191 TGGTTTTTGGCTTCGGTTTTAC 58.217 40.909 0.00 0.00 0.00 2.01
782 784 3.447944 TGGTTTTTGGCTTCGGTTTTACT 59.552 39.130 0.00 0.00 0.00 2.24
783 785 4.046462 GGTTTTTGGCTTCGGTTTTACTC 58.954 43.478 0.00 0.00 0.00 2.59
784 786 4.202080 GGTTTTTGGCTTCGGTTTTACTCT 60.202 41.667 0.00 0.00 0.00 3.24
785 787 5.008911 GGTTTTTGGCTTCGGTTTTACTCTA 59.991 40.000 0.00 0.00 0.00 2.43
786 788 6.294342 GGTTTTTGGCTTCGGTTTTACTCTAT 60.294 38.462 0.00 0.00 0.00 1.98
787 789 7.094677 GGTTTTTGGCTTCGGTTTTACTCTATA 60.095 37.037 0.00 0.00 0.00 1.31
788 790 6.973229 TTTGGCTTCGGTTTTACTCTATAC 57.027 37.500 0.00 0.00 0.00 1.47
789 791 5.927281 TGGCTTCGGTTTTACTCTATACT 57.073 39.130 0.00 0.00 0.00 2.12
790 792 7.408756 TTGGCTTCGGTTTTACTCTATACTA 57.591 36.000 0.00 0.00 0.00 1.82
791 793 7.592885 TGGCTTCGGTTTTACTCTATACTAT 57.407 36.000 0.00 0.00 0.00 2.12
792 794 8.015185 TGGCTTCGGTTTTACTCTATACTATT 57.985 34.615 0.00 0.00 0.00 1.73
793 795 7.924412 TGGCTTCGGTTTTACTCTATACTATTG 59.076 37.037 0.00 0.00 0.00 1.90
794 796 7.924947 GGCTTCGGTTTTACTCTATACTATTGT 59.075 37.037 0.00 0.00 0.00 2.71
795 797 9.310716 GCTTCGGTTTTACTCTATACTATTGTT 57.689 33.333 0.00 0.00 0.00 2.83
833 835 0.380378 TGACCACTTTGTTCGCTTGC 59.620 50.000 0.00 0.00 0.00 4.01
845 847 4.725758 GCTTGCGCGACTAGTTTG 57.274 55.556 12.10 0.00 0.00 2.93
854 856 0.605319 CGACTAGTTTGCTGGCCCAA 60.605 55.000 0.00 0.00 0.00 4.12
855 857 0.881796 GACTAGTTTGCTGGCCCAAC 59.118 55.000 0.00 0.00 0.00 3.77
864 866 1.519455 CTGGCCCAACGAGATCGAC 60.519 63.158 9.58 0.00 43.02 4.20
871 873 2.772691 AACGAGATCGACGGCCCTC 61.773 63.158 9.58 0.00 43.02 4.30
874 876 2.835431 AGATCGACGGCCCTCCTG 60.835 66.667 0.00 0.00 0.00 3.86
875 877 4.593864 GATCGACGGCCCTCCTGC 62.594 72.222 0.00 0.00 0.00 4.85
881 883 1.848652 GACGGCCCTCCTGCTATATA 58.151 55.000 0.00 0.00 0.00 0.86
884 886 1.478510 CGGCCCTCCTGCTATATAGTG 59.521 57.143 11.38 5.04 0.00 2.74
886 888 2.234908 GGCCCTCCTGCTATATAGTGTG 59.765 54.545 11.38 2.48 0.00 3.82
887 889 2.234908 GCCCTCCTGCTATATAGTGTGG 59.765 54.545 11.38 10.50 0.00 4.17
888 890 3.511477 CCCTCCTGCTATATAGTGTGGT 58.489 50.000 11.38 0.00 0.00 4.16
889 891 4.673968 CCCTCCTGCTATATAGTGTGGTA 58.326 47.826 11.38 2.39 0.00 3.25
890 892 5.084519 CCCTCCTGCTATATAGTGTGGTAA 58.915 45.833 11.38 0.00 0.00 2.85
891 893 5.047235 CCCTCCTGCTATATAGTGTGGTAAC 60.047 48.000 11.38 0.00 0.00 2.50
892 894 5.047235 CCTCCTGCTATATAGTGTGGTAACC 60.047 48.000 11.38 0.00 0.00 2.85
894 896 5.538813 TCCTGCTATATAGTGTGGTAACCTG 59.461 44.000 11.38 0.00 0.00 4.00
895 897 5.538813 CCTGCTATATAGTGTGGTAACCTGA 59.461 44.000 11.38 0.00 0.00 3.86
896 898 6.294787 CCTGCTATATAGTGTGGTAACCTGAG 60.295 46.154 11.38 0.00 0.00 3.35
897 899 6.134055 TGCTATATAGTGTGGTAACCTGAGT 58.866 40.000 11.38 0.00 0.00 3.41
910 918 1.153939 CTGAGTCTGTCGCCCTTCG 60.154 63.158 0.00 0.00 40.15 3.79
943 951 1.895131 CATCAGTTCCCCCACCAAAAG 59.105 52.381 0.00 0.00 0.00 2.27
945 953 1.530655 AGTTCCCCCACCAAAAGCG 60.531 57.895 0.00 0.00 0.00 4.68
963 971 0.986527 CGTAGGGTTAGGGTTTGGGT 59.013 55.000 0.00 0.00 0.00 4.51
1010 1018 4.545706 GATCGCCATGCCCACCGA 62.546 66.667 0.00 0.00 0.00 4.69
1280 1324 3.631046 CCCGCCAGCCTATCCCTC 61.631 72.222 0.00 0.00 0.00 4.30
1458 1586 2.421529 GCCGTTCCTGATGGATAACCTT 60.422 50.000 0.00 0.00 42.81 3.50
1528 1659 4.439426 CCGACCTCAATGTCTACTCTGAAG 60.439 50.000 0.00 0.00 32.97 3.02
1531 1662 6.279513 ACCTCAATGTCTACTCTGAAGAAG 57.720 41.667 0.00 0.00 0.00 2.85
1537 1668 0.820871 CTACTCTGAAGAAGCGGGCT 59.179 55.000 0.00 0.00 0.00 5.19
1561 1692 0.664466 TGCTGAACTCTGCGTCTTCG 60.664 55.000 4.42 0.00 42.71 3.79
1567 1698 0.606944 ACTCTGCGTCTTCGACTCCT 60.607 55.000 0.00 0.00 39.71 3.69
1570 1704 0.099082 CTGCGTCTTCGACTCCTACC 59.901 60.000 0.00 0.00 39.71 3.18
1575 1709 2.683867 CGTCTTCGACTCCTACCTCAAT 59.316 50.000 0.00 0.00 39.71 2.57
1589 1723 5.823045 CCTACCTCAATAAGTGGGAAATCAC 59.177 44.000 0.00 0.00 36.79 3.06
1600 1734 1.680338 GGAAATCACCCCCAAGATCG 58.320 55.000 0.00 0.00 0.00 3.69
1601 1735 1.025041 GAAATCACCCCCAAGATCGC 58.975 55.000 0.00 0.00 0.00 4.58
1602 1736 0.625849 AAATCACCCCCAAGATCGCT 59.374 50.000 0.00 0.00 0.00 4.93
1603 1737 0.625849 AATCACCCCCAAGATCGCTT 59.374 50.000 0.00 0.00 33.74 4.68
1605 1739 0.035439 TCACCCCCAAGATCGCTTTC 60.035 55.000 0.00 0.00 30.14 2.62
1606 1740 1.078426 ACCCCCAAGATCGCTTTCG 60.078 57.895 0.00 0.00 30.14 3.46
1616 1771 1.287815 TCGCTTTCGACGACCACAT 59.712 52.632 0.00 0.00 40.21 3.21
1633 1788 1.001020 ATCAATGGCGGCCAGTTCA 60.001 52.632 27.62 13.81 36.75 3.18
1660 1815 0.178992 CTGGTCAACCCACCATGTGT 60.179 55.000 0.00 0.00 45.76 3.72
1683 1838 1.067060 GCTTTTGCTGGTCGTTTCCTT 59.933 47.619 0.00 0.00 43.35 3.36
1731 1889 3.133542 TCCTGCTATGTGACTTCTCCATG 59.866 47.826 0.00 0.00 0.00 3.66
1733 1891 4.118410 CTGCTATGTGACTTCTCCATGAC 58.882 47.826 0.00 0.00 0.00 3.06
1740 1898 3.256879 GTGACTTCTCCATGACAGACTCA 59.743 47.826 0.00 0.00 0.00 3.41
1767 1925 1.449070 CCGCTTCGTACCTTTCCCC 60.449 63.158 0.00 0.00 0.00 4.81
1795 1953 9.886132 GAGAAAAAGAGTACCATGATAAGGTAA 57.114 33.333 0.00 0.00 42.87 2.85
1805 1963 6.557568 ACCATGATAAGGTAAGGGTTGAAAA 58.442 36.000 0.00 0.00 37.67 2.29
1815 1973 7.161773 GGTAAGGGTTGAAAATTACTTACCC 57.838 40.000 16.59 9.59 44.46 3.69
1891 2049 2.673368 GACAATGACTTCCATGACCGAC 59.327 50.000 0.00 0.00 35.24 4.79
1901 2059 1.270518 CCATGACCGACTCCATGATCC 60.271 57.143 0.00 0.00 41.88 3.36
1903 2061 0.325203 TGACCGACTCCATGATCCCA 60.325 55.000 0.00 0.00 0.00 4.37
1936 2106 2.789213 AGCTTCCTGAGAGAAAAAGCC 58.211 47.619 0.00 0.00 42.52 4.35
1937 2107 2.107204 AGCTTCCTGAGAGAAAAAGCCA 59.893 45.455 0.00 0.00 42.52 4.75
1938 2108 3.087781 GCTTCCTGAGAGAAAAAGCCAT 58.912 45.455 0.00 0.00 37.06 4.40
2001 2189 0.680061 ACTCCAAGTTCGAGTGGGAC 59.320 55.000 2.01 0.00 39.14 4.46
2013 2201 2.630098 CGAGTGGGACCTACATCATGAT 59.370 50.000 11.00 1.18 0.00 2.45
2016 2204 5.047021 CGAGTGGGACCTACATCATGATATT 60.047 44.000 8.15 0.89 0.00 1.28
2018 2206 7.487822 AGTGGGACCTACATCATGATATTAG 57.512 40.000 8.15 11.47 0.00 1.73
2023 2211 5.738909 ACCTACATCATGATATTAGCCTGC 58.261 41.667 8.15 0.00 0.00 4.85
2026 2214 6.482641 CCTACATCATGATATTAGCCTGCATC 59.517 42.308 8.15 0.00 0.00 3.91
2036 2224 2.503061 CCTGCATCGTCTCTGGGG 59.497 66.667 0.00 0.00 0.00 4.96
2073 2261 2.135933 GCTCTGGGTATACATCAACGC 58.864 52.381 5.01 4.54 0.00 4.84
2094 2282 3.879321 GCCTTCCTGAGTTCCCAATCATT 60.879 47.826 0.00 0.00 0.00 2.57
2110 2298 2.792947 ATTAGCGCCGATGACCCGT 61.793 57.895 2.29 0.00 0.00 5.28
2125 2313 0.673333 CCCGTATGTTCTGTGCTGCA 60.673 55.000 0.00 0.00 0.00 4.41
2126 2314 0.443869 CCGTATGTTCTGTGCTGCAC 59.556 55.000 25.15 25.15 34.56 4.57
2127 2315 0.443869 CGTATGTTCTGTGCTGCACC 59.556 55.000 28.17 14.20 32.73 5.01
2131 2319 2.566833 TGTTCTGTGCTGCACCTTAT 57.433 45.000 28.17 0.00 32.73 1.73
2136 2362 2.153645 CTGTGCTGCACCTTATGTTGA 58.846 47.619 28.17 6.88 32.73 3.18
2139 2365 0.447801 GCTGCACCTTATGTTGACGG 59.552 55.000 0.00 0.00 0.00 4.79
2141 2367 0.958382 TGCACCTTATGTTGACGGCC 60.958 55.000 0.00 0.00 0.00 6.13
2147 2373 1.677576 CTTATGTTGACGGCCATGCAT 59.322 47.619 2.24 0.00 0.00 3.96
2148 2374 1.023502 TATGTTGACGGCCATGCATG 58.976 50.000 20.19 20.19 0.00 4.06
2150 2376 1.153978 GTTGACGGCCATGCATGTG 60.154 57.895 24.58 16.68 0.00 3.21
2162 2388 3.265955 CATGTGTGCGGTCATGCA 58.734 55.556 0.00 0.00 43.95 3.96
2168 2394 2.046988 TGCGGTCATGCACTCCTG 60.047 61.111 0.00 0.00 40.62 3.86
2169 2395 2.265739 GCGGTCATGCACTCCTGA 59.734 61.111 0.00 0.00 34.15 3.86
2170 2396 1.812922 GCGGTCATGCACTCCTGAG 60.813 63.158 0.00 0.00 34.15 3.35
2171 2397 1.593787 CGGTCATGCACTCCTGAGT 59.406 57.895 0.00 0.00 43.61 3.41
2172 2398 0.459237 CGGTCATGCACTCCTGAGTC 60.459 60.000 0.00 0.00 40.20 3.36
2180 2406 1.202114 GCACTCCTGAGTCTGAGTCTG 59.798 57.143 13.30 12.22 39.76 3.51
2181 2407 1.202114 CACTCCTGAGTCTGAGTCTGC 59.798 57.143 13.30 0.00 39.76 4.26
2184 2410 0.962855 CCTGAGTCTGAGTCTGCGGA 60.963 60.000 13.30 0.00 0.00 5.54
2206 2432 1.651240 CGAAAGCTCACCATGCCCAG 61.651 60.000 0.00 0.00 0.00 4.45
2207 2433 0.610232 GAAAGCTCACCATGCCCAGT 60.610 55.000 0.00 0.00 0.00 4.00
2211 2437 0.895100 GCTCACCATGCCCAGTTTCA 60.895 55.000 0.00 0.00 0.00 2.69
2213 2439 2.945440 GCTCACCATGCCCAGTTTCATA 60.945 50.000 0.00 0.00 0.00 2.15
2233 2459 0.618981 CTGTCCCCCTACTTCCAACC 59.381 60.000 0.00 0.00 0.00 3.77
2236 2462 0.474273 TCCCCCTACTTCCAACCGTT 60.474 55.000 0.00 0.00 0.00 4.44
2310 2536 7.934855 AATATTCAGAATGCTATGATGTCCC 57.065 36.000 5.85 0.00 34.76 4.46
2311 2537 5.579753 ATTCAGAATGCTATGATGTCCCT 57.420 39.130 0.00 0.00 34.76 4.20
2312 2538 5.378230 TTCAGAATGCTATGATGTCCCTT 57.622 39.130 0.00 0.00 34.76 3.95
2314 2540 5.759059 TCAGAATGCTATGATGTCCCTTTT 58.241 37.500 0.00 0.00 34.76 2.27
2315 2541 6.899089 TCAGAATGCTATGATGTCCCTTTTA 58.101 36.000 0.00 0.00 34.76 1.52
2316 2542 7.520798 TCAGAATGCTATGATGTCCCTTTTAT 58.479 34.615 0.00 0.00 34.76 1.40
2317 2543 7.446319 TCAGAATGCTATGATGTCCCTTTTATG 59.554 37.037 0.00 0.00 34.76 1.90
2318 2544 7.230108 CAGAATGCTATGATGTCCCTTTTATGT 59.770 37.037 0.00 0.00 0.00 2.29
2319 2545 8.439971 AGAATGCTATGATGTCCCTTTTATGTA 58.560 33.333 0.00 0.00 0.00 2.29
2320 2546 9.236006 GAATGCTATGATGTCCCTTTTATGTAT 57.764 33.333 0.00 0.00 0.00 2.29
2321 2547 9.592196 AATGCTATGATGTCCCTTTTATGTATT 57.408 29.630 0.00 0.00 0.00 1.89
2322 2548 8.995027 TGCTATGATGTCCCTTTTATGTATTT 57.005 30.769 0.00 0.00 0.00 1.40
2323 2549 9.420118 TGCTATGATGTCCCTTTTATGTATTTT 57.580 29.630 0.00 0.00 0.00 1.82
2324 2550 9.899226 GCTATGATGTCCCTTTTATGTATTTTC 57.101 33.333 0.00 0.00 0.00 2.29
2330 2556 9.990868 ATGTCCCTTTTATGTATTTTCTTACCT 57.009 29.630 0.00 0.00 0.00 3.08
2369 2595 3.858503 GCCTTTGCTTAGCTTTCTGTTGG 60.859 47.826 5.60 0.00 33.53 3.77
2375 2601 4.336433 TGCTTAGCTTTCTGTTGGATATGC 59.664 41.667 5.60 0.00 0.00 3.14
2379 2605 5.365021 AGCTTTCTGTTGGATATGCTACT 57.635 39.130 9.88 0.00 0.00 2.57
2380 2606 5.363939 AGCTTTCTGTTGGATATGCTACTC 58.636 41.667 9.88 0.00 0.00 2.59
2382 2608 5.819901 GCTTTCTGTTGGATATGCTACTCTT 59.180 40.000 9.88 0.00 0.00 2.85
2383 2609 6.986817 GCTTTCTGTTGGATATGCTACTCTTA 59.013 38.462 9.88 0.00 0.00 2.10
2384 2610 7.495934 GCTTTCTGTTGGATATGCTACTCTTAA 59.504 37.037 9.88 0.29 0.00 1.85
2385 2611 8.718102 TTTCTGTTGGATATGCTACTCTTAAC 57.282 34.615 9.88 0.00 0.00 2.01
2388 2614 5.163447 TGTTGGATATGCTACTCTTAACGCT 60.163 40.000 9.88 0.00 0.00 5.07
2390 2616 4.159857 GGATATGCTACTCTTAACGCTCG 58.840 47.826 0.00 0.00 0.00 5.03
2392 2618 2.257974 TGCTACTCTTAACGCTCGTG 57.742 50.000 0.00 0.00 0.00 4.35
2393 2619 1.538512 TGCTACTCTTAACGCTCGTGT 59.461 47.619 0.00 0.00 0.00 4.49
2404 2630 0.718220 CGCTCGTGTTTTTGCTCGTC 60.718 55.000 0.00 0.00 0.00 4.20
2406 2632 1.397315 GCTCGTGTTTTTGCTCGTCTC 60.397 52.381 0.00 0.00 0.00 3.36
2408 2634 2.540101 CTCGTGTTTTTGCTCGTCTCTT 59.460 45.455 0.00 0.00 0.00 2.85
2410 2636 3.372822 TCGTGTTTTTGCTCGTCTCTTTT 59.627 39.130 0.00 0.00 0.00 2.27
2413 2639 4.968181 GTGTTTTTGCTCGTCTCTTTTACC 59.032 41.667 0.00 0.00 0.00 2.85
2421 2648 4.446051 GCTCGTCTCTTTTACCTATGATGC 59.554 45.833 0.00 0.00 0.00 3.91
2431 2658 9.203421 TCTTTTACCTATGATGCAATACATACG 57.797 33.333 0.00 0.00 39.84 3.06
2432 2659 6.961359 TTACCTATGATGCAATACATACGC 57.039 37.500 0.00 0.00 39.84 4.42
2433 2660 5.152623 ACCTATGATGCAATACATACGCT 57.847 39.130 0.00 0.00 39.84 5.07
2434 2661 4.931601 ACCTATGATGCAATACATACGCTG 59.068 41.667 0.00 0.00 39.84 5.18
2435 2662 3.818961 ATGATGCAATACATACGCTGC 57.181 42.857 0.00 0.00 39.84 5.25
2436 2663 1.872952 TGATGCAATACATACGCTGCC 59.127 47.619 0.00 0.00 39.84 4.85
2437 2664 1.197721 GATGCAATACATACGCTGCCC 59.802 52.381 0.00 0.00 39.84 5.36
2438 2665 1.157257 TGCAATACATACGCTGCCCG 61.157 55.000 0.00 0.00 44.21 6.13
2439 2666 1.841663 GCAATACATACGCTGCCCGG 61.842 60.000 0.00 0.00 42.52 5.73
2440 2667 0.531974 CAATACATACGCTGCCCGGT 60.532 55.000 0.00 0.00 42.52 5.28
2441 2668 0.179468 AATACATACGCTGCCCGGTT 59.821 50.000 0.00 0.00 42.52 4.44
2442 2669 0.531974 ATACATACGCTGCCCGGTTG 60.532 55.000 0.00 0.00 42.52 3.77
2443 2670 3.876198 CATACGCTGCCCGGTTGC 61.876 66.667 0.00 0.00 42.52 4.17
2444 2671 4.402528 ATACGCTGCCCGGTTGCA 62.403 61.111 0.00 2.33 42.52 4.08
2445 2672 3.697439 ATACGCTGCCCGGTTGCAT 62.697 57.895 5.81 0.00 41.16 3.96
2446 2673 3.910914 TACGCTGCCCGGTTGCATT 62.911 57.895 5.81 0.00 41.16 3.56
2447 2674 4.781959 CGCTGCCCGGTTGCATTG 62.782 66.667 5.81 0.00 41.16 2.82
2448 2675 4.440127 GCTGCCCGGTTGCATTGG 62.440 66.667 5.81 0.00 41.16 3.16
2449 2676 4.440127 CTGCCCGGTTGCATTGGC 62.440 66.667 5.81 8.81 41.16 4.52
2450 2677 4.992740 TGCCCGGTTGCATTGGCT 62.993 61.111 14.78 0.00 44.32 4.75
2451 2678 4.440127 GCCCGGTTGCATTGGCTG 62.440 66.667 0.00 0.00 40.77 4.85
2452 2679 2.990967 CCCGGTTGCATTGGCTGT 60.991 61.111 0.00 0.00 41.91 4.40
2453 2680 1.677300 CCCGGTTGCATTGGCTGTA 60.677 57.895 0.00 0.00 41.91 2.74
2454 2681 1.656818 CCCGGTTGCATTGGCTGTAG 61.657 60.000 0.00 0.00 41.91 2.74
2455 2682 1.656818 CCGGTTGCATTGGCTGTAGG 61.657 60.000 0.00 0.00 41.91 3.18
2456 2683 0.676466 CGGTTGCATTGGCTGTAGGA 60.676 55.000 0.00 0.00 41.91 2.94
2457 2684 1.767759 GGTTGCATTGGCTGTAGGAT 58.232 50.000 0.00 0.00 41.91 3.24
2458 2685 2.102578 GGTTGCATTGGCTGTAGGATT 58.897 47.619 0.00 0.00 41.91 3.01
2459 2686 2.099756 GGTTGCATTGGCTGTAGGATTC 59.900 50.000 0.00 0.00 41.91 2.52
2460 2687 3.019564 GTTGCATTGGCTGTAGGATTCT 58.980 45.455 0.00 0.00 41.91 2.40
2461 2688 2.923121 TGCATTGGCTGTAGGATTCTC 58.077 47.619 0.00 0.00 41.91 2.87
2462 2689 2.239402 TGCATTGGCTGTAGGATTCTCA 59.761 45.455 0.00 0.00 41.91 3.27
2463 2690 3.282021 GCATTGGCTGTAGGATTCTCAA 58.718 45.455 0.00 0.00 36.96 3.02
2464 2691 3.887716 GCATTGGCTGTAGGATTCTCAAT 59.112 43.478 0.00 0.00 36.96 2.57
2465 2692 4.261489 GCATTGGCTGTAGGATTCTCAATG 60.261 45.833 7.65 7.65 41.37 2.82
2466 2693 3.565764 TGGCTGTAGGATTCTCAATGG 57.434 47.619 0.00 0.00 0.00 3.16
2467 2694 2.846206 TGGCTGTAGGATTCTCAATGGT 59.154 45.455 0.00 0.00 0.00 3.55
2468 2695 4.037222 TGGCTGTAGGATTCTCAATGGTA 58.963 43.478 0.00 0.00 0.00 3.25
2469 2696 4.473196 TGGCTGTAGGATTCTCAATGGTAA 59.527 41.667 0.00 0.00 0.00 2.85
2470 2697 5.132648 TGGCTGTAGGATTCTCAATGGTAAT 59.867 40.000 0.00 0.00 0.00 1.89
2471 2698 6.064717 GGCTGTAGGATTCTCAATGGTAATT 58.935 40.000 0.00 0.00 0.00 1.40
2472 2699 6.016777 GGCTGTAGGATTCTCAATGGTAATTG 60.017 42.308 0.00 0.00 43.94 2.32
2499 2726 8.649973 ACTCTGTTTTAATAGCTACTGTATGC 57.350 34.615 0.00 0.00 0.00 3.14
2501 2728 8.648557 TCTGTTTTAATAGCTACTGTATGCTG 57.351 34.615 16.72 0.00 40.08 4.41
2502 2729 7.224753 TCTGTTTTAATAGCTACTGTATGCTGC 59.775 37.037 16.72 0.00 40.08 5.25
2503 2730 6.260050 TGTTTTAATAGCTACTGTATGCTGCC 59.740 38.462 16.72 0.00 40.08 4.85
2505 2732 0.673985 TAGCTACTGTATGCTGCCCG 59.326 55.000 16.72 0.00 40.08 6.13
2506 2733 2.247437 GCTACTGTATGCTGCCCGC 61.247 63.158 0.00 0.00 39.77 6.13
2507 2734 1.443407 CTACTGTATGCTGCCCGCT 59.557 57.895 0.00 0.00 40.11 5.52
2508 2735 0.598680 CTACTGTATGCTGCCCGCTC 60.599 60.000 0.00 0.00 40.11 5.03
2509 2736 1.043116 TACTGTATGCTGCCCGCTCT 61.043 55.000 0.00 0.00 40.11 4.09
2510 2737 1.043116 ACTGTATGCTGCCCGCTCTA 61.043 55.000 0.00 0.00 40.11 2.43
2511 2738 0.104855 CTGTATGCTGCCCGCTCTAA 59.895 55.000 0.00 0.00 40.11 2.10
2512 2739 0.104855 TGTATGCTGCCCGCTCTAAG 59.895 55.000 0.00 0.00 40.11 2.18
2513 2740 0.105039 GTATGCTGCCCGCTCTAAGT 59.895 55.000 0.00 0.00 40.11 2.24
2514 2741 0.104855 TATGCTGCCCGCTCTAAGTG 59.895 55.000 0.00 0.00 40.11 3.16
2515 2742 1.903877 ATGCTGCCCGCTCTAAGTGT 61.904 55.000 0.00 0.00 40.11 3.55
2517 2744 1.153549 CTGCCCGCTCTAAGTGTCC 60.154 63.158 0.00 0.00 0.00 4.02
2518 2745 2.187163 GCCCGCTCTAAGTGTCCC 59.813 66.667 0.00 0.00 0.00 4.46
2520 2747 2.732619 CCCGCTCTAAGTGTCCCCC 61.733 68.421 0.00 0.00 0.00 5.40
2541 2768 2.429930 CCCCCTTCTGTGCAACGA 59.570 61.111 0.00 0.00 42.39 3.85
2542 2769 1.966451 CCCCCTTCTGTGCAACGAC 60.966 63.158 0.00 0.00 42.39 4.34
2543 2770 1.071471 CCCCTTCTGTGCAACGACT 59.929 57.895 0.00 0.00 42.39 4.18
2546 2773 1.002468 CCCTTCTGTGCAACGACTTTG 60.002 52.381 0.00 0.00 42.39 2.77
2558 2785 3.881937 ACGACTTTGTAGACCCATACC 57.118 47.619 0.00 0.00 0.00 2.73
2559 2786 3.167485 ACGACTTTGTAGACCCATACCA 58.833 45.455 0.00 0.00 0.00 3.25
2569 2796 6.125029 TGTAGACCCATACCACTCTACTAAC 58.875 44.000 0.00 0.00 37.21 2.34
2571 2798 4.016851 AGACCCATACCACTCTACTAACCA 60.017 45.833 0.00 0.00 0.00 3.67
2574 2801 4.443034 CCCATACCACTCTACTAACCAAGC 60.443 50.000 0.00 0.00 0.00 4.01
2585 2812 0.029567 TAACCAAGCGTTGTTTGCCG 59.970 50.000 0.00 0.00 35.79 5.69
2594 2821 3.095738 GCGTTGTTTGCCGTATGTTATC 58.904 45.455 0.00 0.00 0.00 1.75
2600 2827 4.189231 GTTTGCCGTATGTTATCCTCTGT 58.811 43.478 0.00 0.00 0.00 3.41
2604 2831 2.794910 CCGTATGTTATCCTCTGTTGCG 59.205 50.000 0.00 0.00 0.00 4.85
2607 2834 5.038683 CGTATGTTATCCTCTGTTGCGTTA 58.961 41.667 0.00 0.00 0.00 3.18
2612 2839 1.629043 TCCTCTGTTGCGTTACTCCT 58.371 50.000 0.00 0.00 0.00 3.69
2614 2841 1.000955 CCTCTGTTGCGTTACTCCTGT 59.999 52.381 0.00 0.00 0.00 4.00
2617 2844 2.364324 TCTGTTGCGTTACTCCTGTCTT 59.636 45.455 0.00 0.00 0.00 3.01
2618 2845 2.476619 CTGTTGCGTTACTCCTGTCTTG 59.523 50.000 0.00 0.00 0.00 3.02
2620 2847 3.128349 GTTGCGTTACTCCTGTCTTGAA 58.872 45.455 0.00 0.00 0.00 2.69
2622 2849 3.799366 TGCGTTACTCCTGTCTTGAAAA 58.201 40.909 0.00 0.00 0.00 2.29
2624 2851 4.819630 TGCGTTACTCCTGTCTTGAAAATT 59.180 37.500 0.00 0.00 0.00 1.82
2626 2853 5.617087 GCGTTACTCCTGTCTTGAAAATTCC 60.617 44.000 0.00 0.00 0.00 3.01
2635 2862 6.073440 CCTGTCTTGAAAATTCCATTTTGCTG 60.073 38.462 0.00 0.00 42.15 4.41
2636 2863 5.236911 TGTCTTGAAAATTCCATTTTGCTGC 59.763 36.000 0.00 0.00 42.15 5.25
2637 2864 4.756135 TCTTGAAAATTCCATTTTGCTGCC 59.244 37.500 0.00 0.00 42.15 4.85
2638 2865 4.354893 TGAAAATTCCATTTTGCTGCCT 57.645 36.364 0.00 0.00 42.15 4.75
2639 2866 4.716794 TGAAAATTCCATTTTGCTGCCTT 58.283 34.783 0.00 0.00 42.15 4.35
2640 2867 4.756135 TGAAAATTCCATTTTGCTGCCTTC 59.244 37.500 0.00 0.00 42.15 3.46
2641 2868 3.339253 AATTCCATTTTGCTGCCTTCC 57.661 42.857 0.00 0.00 0.00 3.46
2642 2869 2.014010 TTCCATTTTGCTGCCTTCCT 57.986 45.000 0.00 0.00 0.00 3.36
2643 2870 2.014010 TCCATTTTGCTGCCTTCCTT 57.986 45.000 0.00 0.00 0.00 3.36
2644 2871 1.619827 TCCATTTTGCTGCCTTCCTTG 59.380 47.619 0.00 0.00 0.00 3.61
2645 2872 1.338389 CCATTTTGCTGCCTTCCTTGG 60.338 52.381 0.00 0.00 0.00 3.61
2649 2876 0.106268 TTGCTGCCTTCCTTGGTTGA 60.106 50.000 0.00 0.00 0.00 3.18
2654 2881 2.229784 CTGCCTTCCTTGGTTGAATCAC 59.770 50.000 0.00 0.00 0.00 3.06
2656 2883 1.812571 CCTTCCTTGGTTGAATCACGG 59.187 52.381 0.00 0.00 0.00 4.94
2658 2885 2.178912 TCCTTGGTTGAATCACGGAC 57.821 50.000 0.00 0.00 29.24 4.79
2662 2889 0.323629 TGGTTGAATCACGGACCTCC 59.676 55.000 4.46 0.00 33.33 4.30
2666 2893 0.608130 TGAATCACGGACCTCCAGTG 59.392 55.000 8.96 8.96 39.85 3.66
2680 2907 3.439293 CTCCAGTGTCGCTGTGTTATAG 58.561 50.000 12.31 0.00 43.55 1.31
2683 2910 4.643334 TCCAGTGTCGCTGTGTTATAGTAT 59.357 41.667 12.31 0.00 43.55 2.12
2684 2911 5.824097 TCCAGTGTCGCTGTGTTATAGTATA 59.176 40.000 12.31 0.00 43.55 1.47
2685 2912 6.489022 TCCAGTGTCGCTGTGTTATAGTATAT 59.511 38.462 12.31 0.00 43.55 0.86
2686 2913 6.802348 CCAGTGTCGCTGTGTTATAGTATATC 59.198 42.308 12.31 0.00 43.55 1.63
2688 2915 8.076781 CAGTGTCGCTGTGTTATAGTATATCTT 58.923 37.037 5.17 0.00 40.27 2.40
2689 2916 9.281371 AGTGTCGCTGTGTTATAGTATATCTTA 57.719 33.333 0.00 0.00 0.00 2.10
2731 3251 8.757982 AATATACTGTTGCCATGAATCTTCTT 57.242 30.769 0.00 0.00 0.00 2.52
2732 3252 4.778534 ACTGTTGCCATGAATCTTCTTG 57.221 40.909 0.00 0.17 33.53 3.02
2743 3263 4.579869 TGAATCTTCTTGTAGGCTGTTCC 58.420 43.478 0.00 0.00 0.00 3.62
2744 3264 3.636153 ATCTTCTTGTAGGCTGTTCCC 57.364 47.619 0.00 0.00 34.51 3.97
2745 3265 2.334977 TCTTCTTGTAGGCTGTTCCCA 58.665 47.619 0.00 0.00 34.51 4.37
2748 3268 2.054799 TCTTGTAGGCTGTTCCCAAGT 58.945 47.619 0.00 0.00 36.27 3.16
2749 3269 2.154462 CTTGTAGGCTGTTCCCAAGTG 58.846 52.381 0.00 0.00 32.63 3.16
2750 3270 1.136828 TGTAGGCTGTTCCCAAGTGT 58.863 50.000 0.00 0.00 34.51 3.55
2751 3271 1.493022 TGTAGGCTGTTCCCAAGTGTT 59.507 47.619 0.00 0.00 34.51 3.32
2752 3272 2.706723 TGTAGGCTGTTCCCAAGTGTTA 59.293 45.455 0.00 0.00 34.51 2.41
2753 3273 2.568623 AGGCTGTTCCCAAGTGTTAG 57.431 50.000 0.00 0.00 34.51 2.34
2754 3274 1.774856 AGGCTGTTCCCAAGTGTTAGT 59.225 47.619 0.00 0.00 34.51 2.24
2755 3275 2.174854 AGGCTGTTCCCAAGTGTTAGTT 59.825 45.455 0.00 0.00 34.51 2.24
2756 3276 2.956333 GGCTGTTCCCAAGTGTTAGTTT 59.044 45.455 0.00 0.00 0.00 2.66
2757 3277 3.383505 GGCTGTTCCCAAGTGTTAGTTTT 59.616 43.478 0.00 0.00 0.00 2.43
2758 3278 4.581409 GGCTGTTCCCAAGTGTTAGTTTTA 59.419 41.667 0.00 0.00 0.00 1.52
2759 3279 5.278315 GGCTGTTCCCAAGTGTTAGTTTTAG 60.278 44.000 0.00 0.00 0.00 1.85
2760 3280 5.278315 GCTGTTCCCAAGTGTTAGTTTTAGG 60.278 44.000 0.00 0.00 0.00 2.69
2761 3281 6.003859 TGTTCCCAAGTGTTAGTTTTAGGA 57.996 37.500 0.00 0.00 0.00 2.94
2767 3287 5.305585 CAAGTGTTAGTTTTAGGAGCTCCA 58.694 41.667 33.90 17.39 38.89 3.86
2768 3288 5.153950 AGTGTTAGTTTTAGGAGCTCCAG 57.846 43.478 33.90 0.00 38.89 3.86
2784 3304 2.299013 CTCCAGTTGTGTAGGTGCACTA 59.701 50.000 17.98 4.35 39.89 2.74
2795 3315 5.831702 GTAGGTGCACTACTACACTGTAT 57.168 43.478 21.46 0.00 46.89 2.29
2796 3316 6.932356 GTAGGTGCACTACTACACTGTATA 57.068 41.667 21.46 0.00 46.89 1.47
2798 3318 8.613060 GTAGGTGCACTACTACACTGTATATA 57.387 38.462 21.46 0.00 46.89 0.86
2801 3321 7.942894 AGGTGCACTACTACACTGTATATATCA 59.057 37.037 17.98 0.00 36.99 2.15
2803 3323 9.395707 GTGCACTACTACACTGTATATATCAAC 57.604 37.037 10.32 0.00 33.92 3.18
2805 3325 9.961265 GCACTACTACACTGTATATATCAACAA 57.039 33.333 0.00 0.00 0.00 2.83
2822 3384 7.839680 ATCAACAATAAACTTTGGTCCTTCT 57.160 32.000 0.00 0.00 0.00 2.85
2829 3391 1.425066 ACTTTGGTCCTTCTGCCATCA 59.575 47.619 0.00 0.00 34.37 3.07
2835 3397 2.508526 GTCCTTCTGCCATCAAGTTGT 58.491 47.619 2.11 0.00 0.00 3.32
2840 3402 2.783135 TCTGCCATCAAGTTGTCCTTC 58.217 47.619 2.11 0.00 0.00 3.46
2842 3404 1.071542 TGCCATCAAGTTGTCCTTCGA 59.928 47.619 2.11 0.00 0.00 3.71
2843 3405 1.734465 GCCATCAAGTTGTCCTTCGAG 59.266 52.381 2.11 0.00 0.00 4.04
2845 3407 2.350522 CATCAAGTTGTCCTTCGAGGG 58.649 52.381 7.38 7.38 35.59 4.30
2846 3408 0.034896 TCAAGTTGTCCTTCGAGGGC 59.965 55.000 9.09 4.89 41.40 5.19
2857 3665 1.616374 CTTCGAGGGCCTAGAATCCTC 59.384 57.143 26.29 12.89 42.60 3.71
2859 3667 2.063425 TCGAGGGCCTAGAATCCTCTA 58.937 52.381 14.45 9.06 43.54 2.43
2860 3668 2.650322 TCGAGGGCCTAGAATCCTCTAT 59.350 50.000 14.45 0.00 43.54 1.98
2863 3671 4.081917 CGAGGGCCTAGAATCCTCTATTTC 60.082 50.000 5.73 0.00 43.54 2.17
2864 3672 4.832492 AGGGCCTAGAATCCTCTATTTCA 58.168 43.478 2.82 0.00 33.59 2.69
2865 3673 4.595350 AGGGCCTAGAATCCTCTATTTCAC 59.405 45.833 2.82 0.00 33.59 3.18
2866 3674 4.263112 GGGCCTAGAATCCTCTATTTCACC 60.263 50.000 0.84 0.00 33.59 4.02
2869 3677 5.936956 GCCTAGAATCCTCTATTTCACCATG 59.063 44.000 0.00 0.00 33.59 3.66
2870 3678 6.465035 GCCTAGAATCCTCTATTTCACCATGT 60.465 42.308 0.00 0.00 33.59 3.21
2871 3679 7.512992 CCTAGAATCCTCTATTTCACCATGTT 58.487 38.462 0.00 0.00 33.59 2.71
2873 3681 6.125029 AGAATCCTCTATTTCACCATGTTGG 58.875 40.000 0.00 0.00 45.02 3.77
2874 3682 5.715439 ATCCTCTATTTCACCATGTTGGA 57.285 39.130 0.00 0.00 40.96 3.53
2876 3684 5.684704 TCCTCTATTTCACCATGTTGGATC 58.315 41.667 0.00 0.00 40.96 3.36
2878 4006 6.069440 TCCTCTATTTCACCATGTTGGATCTT 60.069 38.462 0.00 0.00 40.96 2.40
2880 4008 7.123247 CCTCTATTTCACCATGTTGGATCTTTT 59.877 37.037 0.00 0.00 40.96 2.27
2884 4012 5.867903 TCACCATGTTGGATCTTTTTGTT 57.132 34.783 0.00 0.00 40.96 2.83
2885 4013 5.841810 TCACCATGTTGGATCTTTTTGTTC 58.158 37.500 0.00 0.00 40.96 3.18
2889 4017 6.098124 ACCATGTTGGATCTTTTTGTTCTTCA 59.902 34.615 0.00 0.00 40.96 3.02
2919 4047 5.065704 GACTATATCCATCGTCTGCATGT 57.934 43.478 0.00 0.00 0.00 3.21
2920 4048 6.196079 GACTATATCCATCGTCTGCATGTA 57.804 41.667 0.00 0.00 0.00 2.29
2922 4050 7.881775 ACTATATCCATCGTCTGCATGTATA 57.118 36.000 0.00 0.00 0.00 1.47
2923 4051 7.935520 ACTATATCCATCGTCTGCATGTATAG 58.064 38.462 0.00 0.00 0.00 1.31
2925 4053 4.937201 TCCATCGTCTGCATGTATAGTT 57.063 40.909 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
145 147 1.324383 CCTAACCTTTTGGCGTGGTT 58.676 50.000 0.00 0.00 45.59 3.67
149 151 1.605451 GGCCCTAACCTTTTGGCGT 60.605 57.895 0.00 0.00 44.96 5.68
320 322 1.612199 GCCTCCAACGGGTCATTACAA 60.612 52.381 0.00 0.00 34.93 2.41
389 391 1.616628 AAGAATCACCGGGGCCTCT 60.617 57.895 6.32 3.60 0.00 3.69
416 418 4.278170 AGACATGATAGAGCTTCGGAAGAG 59.722 45.833 21.45 0.00 43.69 2.85
508 510 7.189079 AGTTTCTGAGGAATAAACTCCCTAG 57.811 40.000 0.00 0.00 38.71 3.02
541 543 1.789464 GATCGGCAACTCTATTCTGCG 59.211 52.381 0.00 0.00 36.93 5.18
542 544 1.789464 CGATCGGCAACTCTATTCTGC 59.211 52.381 7.38 0.00 35.28 4.26
578 580 2.177531 GTAGCACGCTCCGAACGA 59.822 61.111 0.00 0.00 0.00 3.85
582 584 3.062466 AGCAGTAGCACGCTCCGA 61.062 61.111 0.00 0.00 45.49 4.55
714 716 6.484308 CGGTACCGTATGGGATTCTAATTTTT 59.516 38.462 26.39 0.00 40.75 1.94
715 717 5.993441 CGGTACCGTATGGGATTCTAATTTT 59.007 40.000 26.39 0.00 40.75 1.82
716 718 5.305128 TCGGTACCGTATGGGATTCTAATTT 59.695 40.000 32.16 0.00 40.75 1.82
717 719 4.834496 TCGGTACCGTATGGGATTCTAATT 59.166 41.667 32.16 0.00 40.75 1.40
718 720 4.410099 TCGGTACCGTATGGGATTCTAAT 58.590 43.478 32.16 0.00 40.75 1.73
719 721 3.831323 TCGGTACCGTATGGGATTCTAA 58.169 45.455 32.16 6.80 40.75 2.10
720 722 3.507162 TCGGTACCGTATGGGATTCTA 57.493 47.619 32.16 7.01 40.75 2.10
721 723 2.369983 TCGGTACCGTATGGGATTCT 57.630 50.000 32.16 0.00 40.75 2.40
722 724 3.387397 CTTTCGGTACCGTATGGGATTC 58.613 50.000 32.16 0.00 40.75 2.52
723 725 2.484241 GCTTTCGGTACCGTATGGGATT 60.484 50.000 32.16 0.00 40.75 3.01
724 726 1.069668 GCTTTCGGTACCGTATGGGAT 59.930 52.381 32.16 0.00 40.75 3.85
725 727 0.461135 GCTTTCGGTACCGTATGGGA 59.539 55.000 32.16 10.73 40.75 4.37
726 728 0.531311 GGCTTTCGGTACCGTATGGG 60.531 60.000 32.16 19.13 40.75 4.00
727 729 0.176219 TGGCTTTCGGTACCGTATGG 59.824 55.000 32.16 20.69 40.74 2.74
728 730 2.012937 TTGGCTTTCGGTACCGTATG 57.987 50.000 32.16 24.74 40.74 2.39
729 731 2.766345 TTTGGCTTTCGGTACCGTAT 57.234 45.000 32.16 0.00 40.74 3.06
730 732 2.540265 TTTTGGCTTTCGGTACCGTA 57.460 45.000 32.16 21.96 40.74 4.02
731 733 1.677942 TTTTTGGCTTTCGGTACCGT 58.322 45.000 32.16 0.00 40.74 4.83
732 734 2.226912 TGATTTTTGGCTTTCGGTACCG 59.773 45.455 28.66 28.66 41.35 4.02
733 735 3.926821 TGATTTTTGGCTTTCGGTACC 57.073 42.857 0.16 0.16 0.00 3.34
734 736 7.876896 TTTTATGATTTTTGGCTTTCGGTAC 57.123 32.000 0.00 0.00 0.00 3.34
735 737 8.930760 CAATTTTATGATTTTTGGCTTTCGGTA 58.069 29.630 0.00 0.00 0.00 4.02
736 738 7.094848 CCAATTTTATGATTTTTGGCTTTCGGT 60.095 33.333 0.00 0.00 31.29 4.69
737 739 7.094848 ACCAATTTTATGATTTTTGGCTTTCGG 60.095 33.333 0.00 0.00 40.37 4.30
738 740 7.805700 ACCAATTTTATGATTTTTGGCTTTCG 58.194 30.769 0.00 0.00 40.37 3.46
739 741 9.964303 AAACCAATTTTATGATTTTTGGCTTTC 57.036 25.926 0.00 0.00 40.37 2.62
742 744 9.747293 CAAAAACCAATTTTATGATTTTTGGCT 57.253 25.926 10.40 0.00 40.66 4.75
745 747 9.747293 AGCCAAAAACCAATTTTATGATTTTTG 57.253 25.926 11.04 11.04 42.50 2.44
747 749 9.964303 GAAGCCAAAAACCAATTTTATGATTTT 57.036 25.926 0.00 0.00 39.20 1.82
748 750 8.288913 CGAAGCCAAAAACCAATTTTATGATTT 58.711 29.630 0.00 0.00 39.20 2.17
749 751 7.094848 CCGAAGCCAAAAACCAATTTTATGATT 60.095 33.333 0.00 0.00 39.20 2.57
750 752 6.371271 CCGAAGCCAAAAACCAATTTTATGAT 59.629 34.615 0.00 0.00 39.20 2.45
751 753 5.698545 CCGAAGCCAAAAACCAATTTTATGA 59.301 36.000 0.00 0.00 39.20 2.15
752 754 5.468409 ACCGAAGCCAAAAACCAATTTTATG 59.532 36.000 0.00 0.00 39.20 1.90
753 755 5.616270 ACCGAAGCCAAAAACCAATTTTAT 58.384 33.333 0.00 0.00 39.20 1.40
754 756 5.024785 ACCGAAGCCAAAAACCAATTTTA 57.975 34.783 0.00 0.00 39.20 1.52
755 757 3.879998 ACCGAAGCCAAAAACCAATTTT 58.120 36.364 0.00 0.00 41.93 1.82
756 758 3.552132 ACCGAAGCCAAAAACCAATTT 57.448 38.095 0.00 0.00 0.00 1.82
757 759 3.552132 AACCGAAGCCAAAAACCAATT 57.448 38.095 0.00 0.00 0.00 2.32
758 760 3.552132 AAACCGAAGCCAAAAACCAAT 57.448 38.095 0.00 0.00 0.00 3.16
759 761 3.336138 AAAACCGAAGCCAAAAACCAA 57.664 38.095 0.00 0.00 0.00 3.67
760 762 3.447944 AGTAAAACCGAAGCCAAAAACCA 59.552 39.130 0.00 0.00 0.00 3.67
761 763 4.046462 GAGTAAAACCGAAGCCAAAAACC 58.954 43.478 0.00 0.00 0.00 3.27
762 764 4.928601 AGAGTAAAACCGAAGCCAAAAAC 58.071 39.130 0.00 0.00 0.00 2.43
763 765 6.887626 ATAGAGTAAAACCGAAGCCAAAAA 57.112 33.333 0.00 0.00 0.00 1.94
764 766 7.163441 AGTATAGAGTAAAACCGAAGCCAAAA 58.837 34.615 0.00 0.00 0.00 2.44
765 767 6.704310 AGTATAGAGTAAAACCGAAGCCAAA 58.296 36.000 0.00 0.00 0.00 3.28
766 768 6.290294 AGTATAGAGTAAAACCGAAGCCAA 57.710 37.500 0.00 0.00 0.00 4.52
767 769 5.927281 AGTATAGAGTAAAACCGAAGCCA 57.073 39.130 0.00 0.00 0.00 4.75
768 770 7.924947 ACAATAGTATAGAGTAAAACCGAAGCC 59.075 37.037 0.00 0.00 0.00 4.35
769 771 8.868635 ACAATAGTATAGAGTAAAACCGAAGC 57.131 34.615 0.00 0.00 0.00 3.86
802 804 7.404671 AACAAAGTGGTCACTCTATGTTTTT 57.595 32.000 16.79 2.86 41.58 1.94
803 805 6.238374 CGAACAAAGTGGTCACTCTATGTTTT 60.238 38.462 20.36 8.63 41.58 2.43
804 806 5.236478 CGAACAAAGTGGTCACTCTATGTTT 59.764 40.000 20.36 11.33 41.58 2.83
805 807 4.750098 CGAACAAAGTGGTCACTCTATGTT 59.250 41.667 19.90 19.90 41.58 2.71
806 808 4.307432 CGAACAAAGTGGTCACTCTATGT 58.693 43.478 3.93 7.50 41.58 2.29
807 809 3.123621 GCGAACAAAGTGGTCACTCTATG 59.876 47.826 3.93 6.94 41.58 2.23
808 810 3.006967 AGCGAACAAAGTGGTCACTCTAT 59.993 43.478 3.93 0.00 41.58 1.98
809 811 2.364324 AGCGAACAAAGTGGTCACTCTA 59.636 45.455 3.93 0.00 41.58 2.43
810 812 1.139058 AGCGAACAAAGTGGTCACTCT 59.861 47.619 3.93 0.00 41.58 3.24
811 813 1.583054 AGCGAACAAAGTGGTCACTC 58.417 50.000 3.93 0.00 41.58 3.51
812 814 1.670811 CAAGCGAACAAAGTGGTCACT 59.329 47.619 0.00 0.00 44.94 3.41
813 815 1.859998 GCAAGCGAACAAAGTGGTCAC 60.860 52.381 0.00 0.00 32.48 3.67
814 816 0.380378 GCAAGCGAACAAAGTGGTCA 59.620 50.000 0.00 0.00 32.48 4.02
815 817 0.657368 CGCAAGCGAACAAAGTGGTC 60.657 55.000 9.11 0.00 42.83 4.02
816 818 1.355210 CGCAAGCGAACAAAGTGGT 59.645 52.632 9.11 0.00 42.83 4.16
817 819 4.210447 CGCAAGCGAACAAAGTGG 57.790 55.556 9.11 0.00 42.83 4.00
833 835 2.740714 GGCCAGCAAACTAGTCGCG 61.741 63.158 0.00 0.00 0.00 5.87
836 838 0.881796 GTTGGGCCAGCAAACTAGTC 59.118 55.000 16.19 0.00 0.00 2.59
845 847 2.892425 CGATCTCGTTGGGCCAGC 60.892 66.667 10.77 10.77 34.11 4.85
854 856 3.210528 GAGGGCCGTCGATCTCGT 61.211 66.667 10.16 0.00 40.80 4.18
855 857 3.967335 GGAGGGCCGTCGATCTCG 61.967 72.222 18.78 0.00 41.45 4.04
864 866 1.478510 CACTATATAGCAGGAGGGCCG 59.521 57.143 9.78 0.00 39.96 6.13
871 873 5.538813 TCAGGTTACCACACTATATAGCAGG 59.461 44.000 9.78 11.08 0.00 4.85
874 876 6.490721 AGACTCAGGTTACCACACTATATAGC 59.509 42.308 9.78 0.00 0.00 2.97
875 877 7.502895 ACAGACTCAGGTTACCACACTATATAG 59.497 40.741 8.27 8.27 0.00 1.31
881 883 2.628657 GACAGACTCAGGTTACCACACT 59.371 50.000 3.51 0.00 0.00 3.55
884 886 1.669211 GCGACAGACTCAGGTTACCAC 60.669 57.143 3.51 0.00 0.00 4.16
886 888 0.108756 GGCGACAGACTCAGGTTACC 60.109 60.000 0.00 0.00 0.00 2.85
887 889 0.108756 GGGCGACAGACTCAGGTTAC 60.109 60.000 0.00 0.00 0.00 2.50
888 890 0.251653 AGGGCGACAGACTCAGGTTA 60.252 55.000 0.00 0.00 0.00 2.85
889 891 1.122019 AAGGGCGACAGACTCAGGTT 61.122 55.000 0.00 0.00 0.00 3.50
890 892 1.534235 AAGGGCGACAGACTCAGGT 60.534 57.895 0.00 0.00 0.00 4.00
891 893 1.216710 GAAGGGCGACAGACTCAGG 59.783 63.158 0.00 0.00 0.00 3.86
892 894 1.153939 CGAAGGGCGACAGACTCAG 60.154 63.158 0.00 0.00 44.57 3.35
894 896 0.733223 GAACGAAGGGCGACAGACTC 60.733 60.000 0.00 0.00 44.57 3.36
895 897 1.289380 GAACGAAGGGCGACAGACT 59.711 57.895 0.00 0.00 44.57 3.24
896 898 1.737008 GGAACGAAGGGCGACAGAC 60.737 63.158 0.00 0.00 44.57 3.51
897 899 1.469335 AAGGAACGAAGGGCGACAGA 61.469 55.000 0.00 0.00 44.57 3.41
910 918 0.613777 ACTGATGGACGGGAAGGAAC 59.386 55.000 0.00 0.00 0.00 3.62
943 951 0.393402 CCCAAACCCTAACCCTACGC 60.393 60.000 0.00 0.00 0.00 4.42
945 953 1.005097 CCACCCAAACCCTAACCCTAC 59.995 57.143 0.00 0.00 0.00 3.18
973 981 1.095807 GGGATCGGAGGGAAAAAGCG 61.096 60.000 0.00 0.00 0.00 4.68
979 987 4.192950 GATCGGGATCGGAGGGAA 57.807 61.111 0.00 0.00 36.95 3.97
1040 1054 4.547367 CGGGATTGGGGAGGACGC 62.547 72.222 0.00 0.00 0.00 5.19
1126 1143 1.264288 GGCGGTCTTGTTCTTGTTGAG 59.736 52.381 0.00 0.00 0.00 3.02
1269 1313 2.203509 CGGACGGAGGGATAGGCT 60.204 66.667 0.00 0.00 0.00 4.58
1418 1546 2.786564 CTTTTTCCCGCGCTCAGTGC 62.787 60.000 5.56 0.00 38.57 4.40
1429 1557 1.202348 CATCAGGAACGGCTTTTTCCC 59.798 52.381 7.62 0.00 43.29 3.97
1537 1668 2.597713 CGCAGAGTTCAGCACGCAA 61.598 57.895 0.00 0.00 0.00 4.85
1561 1692 4.287552 TCCCACTTATTGAGGTAGGAGTC 58.712 47.826 0.00 0.00 0.00 3.36
1567 1698 5.339695 GGGTGATTTCCCACTTATTGAGGTA 60.340 44.000 0.00 0.00 46.30 3.08
1570 1704 5.174077 GGGGGTGATTTCCCACTTATTGAG 61.174 50.000 4.13 0.00 46.90 3.02
1589 1723 1.220749 TCGAAAGCGATCTTGGGGG 59.779 57.895 0.00 0.00 42.51 5.40
1600 1734 1.144969 TTGATGTGGTCGTCGAAAGC 58.855 50.000 0.00 0.00 32.69 3.51
1601 1735 2.094258 CCATTGATGTGGTCGTCGAAAG 59.906 50.000 0.00 0.00 34.46 2.62
1602 1736 2.073056 CCATTGATGTGGTCGTCGAAA 58.927 47.619 0.00 0.00 34.46 3.46
1603 1737 1.720805 CCATTGATGTGGTCGTCGAA 58.279 50.000 0.00 0.00 34.46 3.71
1605 1739 1.715585 GCCATTGATGTGGTCGTCG 59.284 57.895 0.00 0.00 41.47 5.12
1606 1740 1.705337 CCGCCATTGATGTGGTCGTC 61.705 60.000 0.00 0.00 41.47 4.20
1607 1741 1.745115 CCGCCATTGATGTGGTCGT 60.745 57.895 0.00 0.00 41.47 4.34
1608 1742 3.101209 CCGCCATTGATGTGGTCG 58.899 61.111 0.00 0.00 41.47 4.79
1614 1769 1.314534 TGAACTGGCCGCCATTGATG 61.315 55.000 13.86 3.00 30.82 3.07
1616 1771 1.971167 GTGAACTGGCCGCCATTGA 60.971 57.895 13.86 1.14 30.82 2.57
1660 1815 2.535331 GAAACGACCAGCAAAAGCAAA 58.465 42.857 0.00 0.00 0.00 3.68
1674 1829 2.552315 GTCAATCCAGCAAAGGAAACGA 59.448 45.455 0.00 0.00 41.92 3.85
1683 1838 3.338249 GCTGAAGTAGTCAATCCAGCAA 58.662 45.455 0.00 0.00 44.40 3.91
1731 1889 1.080434 GAGCACCGGTGAGTCTGTC 60.080 63.158 38.30 18.00 0.00 3.51
1733 1891 2.262915 GGAGCACCGGTGAGTCTG 59.737 66.667 38.30 11.31 0.00 3.51
1767 1925 6.480320 CCTTATCATGGTACTCTTTTTCTCCG 59.520 42.308 0.00 0.00 0.00 4.63
1795 1953 5.013391 TCTCGGGTAAGTAATTTTCAACCCT 59.987 40.000 9.35 0.00 43.67 4.34
1805 1963 4.467769 TCGGAATCTCTCGGGTAAGTAAT 58.532 43.478 0.00 0.00 0.00 1.89
1812 1970 0.818296 CACTTCGGAATCTCTCGGGT 59.182 55.000 0.00 0.00 0.00 5.28
1815 1973 2.520979 GACACACTTCGGAATCTCTCG 58.479 52.381 0.00 0.00 0.00 4.04
1891 2049 1.617322 CATTGGCTGGGATCATGGAG 58.383 55.000 0.00 0.00 0.00 3.86
1915 2079 3.327757 TGGCTTTTTCTCTCAGGAAGCTA 59.672 43.478 6.38 0.00 41.70 3.32
1936 2106 1.167155 GGAGGCTGATGCTGCTCATG 61.167 60.000 0.00 0.00 39.59 3.07
1937 2107 1.148723 GGAGGCTGATGCTGCTCAT 59.851 57.895 0.00 0.00 39.59 2.90
1938 2108 2.588439 GGAGGCTGATGCTGCTCA 59.412 61.111 0.00 1.50 39.59 4.26
1947 2117 1.004745 GTGATTTTCTGGGGAGGCTGA 59.995 52.381 0.00 0.00 0.00 4.26
2001 2189 5.737860 TGCAGGCTAATATCATGATGTAGG 58.262 41.667 18.72 8.94 0.00 3.18
2013 2201 2.297315 CCAGAGACGATGCAGGCTAATA 59.703 50.000 0.00 0.00 0.00 0.98
2016 2204 1.395045 CCCAGAGACGATGCAGGCTA 61.395 60.000 0.00 0.00 0.00 3.93
2018 2206 2.202987 CCCAGAGACGATGCAGGC 60.203 66.667 0.00 0.00 0.00 4.85
2023 2211 1.450312 GTTGCCCCCAGAGACGATG 60.450 63.158 0.00 0.00 0.00 3.84
2026 2214 3.322466 AGGTTGCCCCCAGAGACG 61.322 66.667 0.00 0.00 0.00 4.18
2036 2224 3.890674 CTCGGTAAGCAGGTTGCC 58.109 61.111 9.33 9.33 46.52 4.52
2045 2233 3.220110 TGTATACCCAGAGCTCGGTAAG 58.780 50.000 20.27 8.86 38.12 2.34
2073 2261 3.659183 ATGATTGGGAACTCAGGAAGG 57.341 47.619 0.00 0.00 0.00 3.46
2094 2282 1.900016 ATACGGGTCATCGGCGCTA 60.900 57.895 7.64 0.00 0.00 4.26
2110 2298 2.566833 AAGGTGCAGCACAGAACATA 57.433 45.000 26.78 0.00 35.86 2.29
2125 2313 1.750193 CATGGCCGTCAACATAAGGT 58.250 50.000 0.00 0.00 0.00 3.50
2126 2314 0.381801 GCATGGCCGTCAACATAAGG 59.618 55.000 0.00 0.00 0.00 2.69
2127 2315 1.093972 TGCATGGCCGTCAACATAAG 58.906 50.000 0.00 0.00 0.00 1.73
2131 2319 1.603171 ACATGCATGGCCGTCAACA 60.603 52.632 29.41 0.00 0.00 3.33
2154 2380 0.901124 AGACTCAGGAGTGCATGACC 59.099 55.000 6.68 0.00 42.66 4.02
2161 2387 1.202114 GCAGACTCAGACTCAGGAGTG 59.798 57.143 6.68 0.00 44.03 3.51
2162 2388 1.544724 GCAGACTCAGACTCAGGAGT 58.455 55.000 0.70 0.70 46.51 3.85
2163 2389 0.451383 CGCAGACTCAGACTCAGGAG 59.549 60.000 0.00 0.00 37.18 3.69
2164 2390 0.962855 CCGCAGACTCAGACTCAGGA 60.963 60.000 0.00 0.00 0.00 3.86
2165 2391 0.962855 TCCGCAGACTCAGACTCAGG 60.963 60.000 0.00 0.00 0.00 3.86
2166 2392 1.102154 ATCCGCAGACTCAGACTCAG 58.898 55.000 0.00 0.00 0.00 3.35
2167 2393 0.813821 CATCCGCAGACTCAGACTCA 59.186 55.000 0.00 0.00 0.00 3.41
2168 2394 0.527385 GCATCCGCAGACTCAGACTC 60.527 60.000 0.00 0.00 38.36 3.36
2169 2395 1.515020 GCATCCGCAGACTCAGACT 59.485 57.895 0.00 0.00 38.36 3.24
2170 2396 1.875813 CGCATCCGCAGACTCAGAC 60.876 63.158 0.00 0.00 38.40 3.51
2171 2397 1.595093 TTCGCATCCGCAGACTCAGA 61.595 55.000 0.00 0.00 38.40 3.27
2172 2398 0.737367 TTTCGCATCCGCAGACTCAG 60.737 55.000 0.00 0.00 38.40 3.35
2180 2406 2.401195 GTGAGCTTTCGCATCCGC 59.599 61.111 0.00 0.00 39.10 5.54
2181 2407 1.091771 ATGGTGAGCTTTCGCATCCG 61.092 55.000 0.00 0.00 39.10 4.18
2184 2410 1.660560 GGCATGGTGAGCTTTCGCAT 61.661 55.000 0.00 0.00 39.10 4.73
2189 2415 0.178953 AACTGGGCATGGTGAGCTTT 60.179 50.000 0.00 0.00 0.00 3.51
2192 2418 0.895100 TGAAACTGGGCATGGTGAGC 60.895 55.000 0.00 0.00 0.00 4.26
2193 2419 1.843368 ATGAAACTGGGCATGGTGAG 58.157 50.000 0.00 0.00 0.00 3.51
2206 2432 4.383880 GGAAGTAGGGGGACAGTATGAAAC 60.384 50.000 0.00 0.00 39.69 2.78
2207 2433 3.778629 GGAAGTAGGGGGACAGTATGAAA 59.221 47.826 0.00 0.00 39.69 2.69
2211 2437 3.113043 GTTGGAAGTAGGGGGACAGTAT 58.887 50.000 0.00 0.00 0.00 2.12
2213 2439 1.359168 GTTGGAAGTAGGGGGACAGT 58.641 55.000 0.00 0.00 0.00 3.55
2216 2442 1.196766 ACGGTTGGAAGTAGGGGGAC 61.197 60.000 0.00 0.00 0.00 4.46
2217 2443 0.474273 AACGGTTGGAAGTAGGGGGA 60.474 55.000 0.00 0.00 0.00 4.81
2233 2459 5.402270 CCTTTCAAGGTATTTGCAGAAAACG 59.598 40.000 0.00 0.00 41.41 3.60
2261 2487 6.215495 AGAGAGATTCTGTTAGTTACCTGC 57.785 41.667 0.00 0.00 33.93 4.85
2294 2520 7.516198 ACATAAAAGGGACATCATAGCATTC 57.484 36.000 0.00 0.00 0.00 2.67
2320 2546 9.452287 AGCCATTTTACGTAATAGGTAAGAAAA 57.548 29.630 9.18 0.00 31.24 2.29
2321 2547 8.885722 CAGCCATTTTACGTAATAGGTAAGAAA 58.114 33.333 9.18 0.00 31.24 2.52
2322 2548 7.011669 GCAGCCATTTTACGTAATAGGTAAGAA 59.988 37.037 9.18 0.00 31.24 2.52
2323 2549 6.480981 GCAGCCATTTTACGTAATAGGTAAGA 59.519 38.462 9.18 2.85 31.24 2.10
2324 2550 6.293244 GGCAGCCATTTTACGTAATAGGTAAG 60.293 42.308 9.18 6.96 31.24 2.34
2325 2551 5.528320 GGCAGCCATTTTACGTAATAGGTAA 59.472 40.000 9.18 0.07 0.00 2.85
2326 2552 5.058490 GGCAGCCATTTTACGTAATAGGTA 58.942 41.667 9.18 0.00 0.00 3.08
2327 2553 3.881089 GGCAGCCATTTTACGTAATAGGT 59.119 43.478 9.18 1.44 0.00 3.08
2328 2554 4.134563 AGGCAGCCATTTTACGTAATAGG 58.865 43.478 15.80 12.03 0.00 2.57
2329 2555 5.751243 AAGGCAGCCATTTTACGTAATAG 57.249 39.130 15.80 2.26 0.00 1.73
2330 2556 5.677598 GCAAAGGCAGCCATTTTACGTAATA 60.678 40.000 15.80 4.75 40.72 0.98
2331 2557 4.743493 CAAAGGCAGCCATTTTACGTAAT 58.257 39.130 15.80 0.00 0.00 1.89
2332 2558 3.612955 GCAAAGGCAGCCATTTTACGTAA 60.613 43.478 15.80 3.29 40.72 3.18
2333 2559 2.094957 GCAAAGGCAGCCATTTTACGTA 60.095 45.455 15.80 0.00 40.72 3.57
2334 2560 1.336795 GCAAAGGCAGCCATTTTACGT 60.337 47.619 15.80 0.00 40.72 3.57
2335 2561 1.067635 AGCAAAGGCAGCCATTTTACG 60.068 47.619 15.80 0.00 44.61 3.18
2336 2562 2.749280 AGCAAAGGCAGCCATTTTAC 57.251 45.000 15.80 0.95 44.61 2.01
2337 2563 3.368323 GCTAAGCAAAGGCAGCCATTTTA 60.368 43.478 15.80 3.86 44.61 1.52
2338 2564 2.613725 GCTAAGCAAAGGCAGCCATTTT 60.614 45.455 15.80 3.15 44.61 1.82
2339 2565 1.066645 GCTAAGCAAAGGCAGCCATTT 60.067 47.619 15.80 8.58 44.61 2.32
2340 2566 0.533951 GCTAAGCAAAGGCAGCCATT 59.466 50.000 15.80 4.77 44.61 3.16
2341 2567 0.324091 AGCTAAGCAAAGGCAGCCAT 60.324 50.000 15.80 0.00 44.61 4.40
2342 2568 0.540365 AAGCTAAGCAAAGGCAGCCA 60.540 50.000 15.80 0.00 44.61 4.75
2345 2571 2.555757 ACAGAAAGCTAAGCAAAGGCAG 59.444 45.455 0.00 0.00 44.61 4.85
2369 2595 4.613448 CACGAGCGTTAAGAGTAGCATATC 59.387 45.833 0.00 0.00 0.00 1.63
2375 2601 5.363517 CAAAAACACGAGCGTTAAGAGTAG 58.636 41.667 0.00 0.00 0.00 2.57
2379 2605 2.610374 AGCAAAAACACGAGCGTTAAGA 59.390 40.909 0.00 0.00 0.00 2.10
2380 2606 2.964768 GAGCAAAAACACGAGCGTTAAG 59.035 45.455 0.00 0.00 0.00 1.85
2382 2608 1.071107 CGAGCAAAAACACGAGCGTTA 60.071 47.619 0.00 0.00 0.00 3.18
2383 2609 0.315869 CGAGCAAAAACACGAGCGTT 60.316 50.000 0.00 0.00 0.00 4.84
2384 2610 1.275657 CGAGCAAAAACACGAGCGT 59.724 52.632 0.00 0.00 0.00 5.07
2385 2611 0.718220 GACGAGCAAAAACACGAGCG 60.718 55.000 0.00 0.00 0.00 5.03
2388 2614 2.218953 AGAGACGAGCAAAAACACGA 57.781 45.000 0.00 0.00 0.00 4.35
2390 2616 4.968181 GGTAAAAGAGACGAGCAAAAACAC 59.032 41.667 0.00 0.00 0.00 3.32
2392 2618 5.419760 AGGTAAAAGAGACGAGCAAAAAC 57.580 39.130 0.00 0.00 0.00 2.43
2393 2619 6.932400 TCATAGGTAAAAGAGACGAGCAAAAA 59.068 34.615 0.00 0.00 0.00 1.94
2406 2632 7.957484 GCGTATGTATTGCATCATAGGTAAAAG 59.043 37.037 18.55 3.34 38.94 2.27
2408 2634 7.117667 CAGCGTATGTATTGCATCATAGGTAAA 59.882 37.037 18.55 0.00 38.94 2.01
2410 2636 6.099341 CAGCGTATGTATTGCATCATAGGTA 58.901 40.000 18.55 0.00 38.94 3.08
2413 2639 4.201753 GGCAGCGTATGTATTGCATCATAG 60.202 45.833 6.90 4.38 38.94 2.23
2421 2648 0.531974 ACCGGGCAGCGTATGTATTG 60.532 55.000 6.32 0.00 0.00 1.90
2434 2661 4.440127 CAGCCAATGCAACCGGGC 62.440 66.667 6.32 11.90 46.77 6.13
2435 2662 1.656818 CTACAGCCAATGCAACCGGG 61.657 60.000 6.32 0.00 41.13 5.73
2436 2663 1.656818 CCTACAGCCAATGCAACCGG 61.657 60.000 0.00 0.00 41.13 5.28
2437 2664 0.676466 TCCTACAGCCAATGCAACCG 60.676 55.000 0.00 0.00 41.13 4.44
2438 2665 1.767759 ATCCTACAGCCAATGCAACC 58.232 50.000 0.00 0.00 41.13 3.77
2439 2666 3.019564 AGAATCCTACAGCCAATGCAAC 58.980 45.455 0.00 0.00 41.13 4.17
2440 2667 3.282021 GAGAATCCTACAGCCAATGCAA 58.718 45.455 0.00 0.00 41.13 4.08
2441 2668 2.239402 TGAGAATCCTACAGCCAATGCA 59.761 45.455 0.00 0.00 41.13 3.96
2442 2669 2.923121 TGAGAATCCTACAGCCAATGC 58.077 47.619 0.00 0.00 37.95 3.56
2443 2670 4.277672 CCATTGAGAATCCTACAGCCAATG 59.722 45.833 0.00 0.00 39.12 2.82
2444 2671 4.079558 ACCATTGAGAATCCTACAGCCAAT 60.080 41.667 0.00 0.00 0.00 3.16
2445 2672 3.266772 ACCATTGAGAATCCTACAGCCAA 59.733 43.478 0.00 0.00 0.00 4.52
2446 2673 2.846206 ACCATTGAGAATCCTACAGCCA 59.154 45.455 0.00 0.00 0.00 4.75
2447 2674 3.567478 ACCATTGAGAATCCTACAGCC 57.433 47.619 0.00 0.00 0.00 4.85
2448 2675 6.767902 TCAATTACCATTGAGAATCCTACAGC 59.232 38.462 0.00 0.00 43.32 4.40
2464 2691 9.515226 AGCTATTAAAACAGAGTTCAATTACCA 57.485 29.630 0.00 0.00 0.00 3.25
2469 2696 9.726438 ACAGTAGCTATTAAAACAGAGTTCAAT 57.274 29.630 0.00 0.00 0.00 2.57
2473 2700 9.099454 GCATACAGTAGCTATTAAAACAGAGTT 57.901 33.333 0.00 0.00 0.00 3.01
2474 2701 8.478877 AGCATACAGTAGCTATTAAAACAGAGT 58.521 33.333 0.00 0.00 39.78 3.24
2475 2702 8.759641 CAGCATACAGTAGCTATTAAAACAGAG 58.240 37.037 0.00 0.00 39.50 3.35
2476 2703 7.224753 GCAGCATACAGTAGCTATTAAAACAGA 59.775 37.037 0.00 0.00 39.50 3.41
2477 2704 7.348201 GCAGCATACAGTAGCTATTAAAACAG 58.652 38.462 0.00 0.00 39.50 3.16
2478 2705 6.260050 GGCAGCATACAGTAGCTATTAAAACA 59.740 38.462 0.00 0.00 39.50 2.83
2479 2706 6.293462 GGGCAGCATACAGTAGCTATTAAAAC 60.293 42.308 0.00 0.00 39.50 2.43
2480 2707 5.763204 GGGCAGCATACAGTAGCTATTAAAA 59.237 40.000 0.00 0.00 39.50 1.52
2481 2708 5.305585 GGGCAGCATACAGTAGCTATTAAA 58.694 41.667 0.00 0.00 39.50 1.52
2482 2709 4.560716 CGGGCAGCATACAGTAGCTATTAA 60.561 45.833 0.00 0.00 39.50 1.40
2488 2715 4.033894 CGGGCAGCATACAGTAGC 57.966 61.111 0.00 0.00 0.00 3.58
2499 2726 1.153549 GGACACTTAGAGCGGGCAG 60.154 63.158 0.00 0.00 0.00 4.85
2501 2728 2.187163 GGGACACTTAGAGCGGGC 59.813 66.667 0.00 0.00 0.00 6.13
2502 2729 2.732619 GGGGGACACTTAGAGCGGG 61.733 68.421 0.00 0.00 0.00 6.13
2503 2730 2.901042 GGGGGACACTTAGAGCGG 59.099 66.667 0.00 0.00 0.00 5.52
2524 2751 1.966451 GTCGTTGCACAGAAGGGGG 60.966 63.158 0.00 0.00 0.00 5.40
2525 2752 0.535102 AAGTCGTTGCACAGAAGGGG 60.535 55.000 0.00 0.00 0.00 4.79
2526 2753 1.002468 CAAAGTCGTTGCACAGAAGGG 60.002 52.381 0.00 0.00 0.00 3.95
2527 2754 1.670811 ACAAAGTCGTTGCACAGAAGG 59.329 47.619 0.00 0.00 41.31 3.46
2528 2755 3.802139 TCTACAAAGTCGTTGCACAGAAG 59.198 43.478 0.00 0.00 41.31 2.85
2529 2756 3.554324 GTCTACAAAGTCGTTGCACAGAA 59.446 43.478 0.00 0.00 41.31 3.02
2530 2757 3.120792 GTCTACAAAGTCGTTGCACAGA 58.879 45.455 0.00 0.00 41.31 3.41
2531 2758 2.221055 GGTCTACAAAGTCGTTGCACAG 59.779 50.000 0.00 0.00 41.31 3.66
2532 2759 2.206750 GGTCTACAAAGTCGTTGCACA 58.793 47.619 0.00 0.00 41.31 4.57
2533 2760 1.529865 GGGTCTACAAAGTCGTTGCAC 59.470 52.381 0.00 0.00 41.31 4.57
2534 2761 1.139256 TGGGTCTACAAAGTCGTTGCA 59.861 47.619 0.00 0.00 41.31 4.08
2535 2762 1.873698 TGGGTCTACAAAGTCGTTGC 58.126 50.000 0.00 0.00 41.31 4.17
2536 2763 3.930848 GGTATGGGTCTACAAAGTCGTTG 59.069 47.826 0.00 0.00 43.43 4.10
2537 2764 3.579586 TGGTATGGGTCTACAAAGTCGTT 59.420 43.478 0.00 0.00 0.00 3.85
2538 2765 3.056322 GTGGTATGGGTCTACAAAGTCGT 60.056 47.826 0.00 0.00 0.00 4.34
2539 2766 3.194968 AGTGGTATGGGTCTACAAAGTCG 59.805 47.826 0.00 0.00 0.00 4.18
2540 2767 4.466726 AGAGTGGTATGGGTCTACAAAGTC 59.533 45.833 0.00 0.00 0.00 3.01
2541 2768 4.426704 AGAGTGGTATGGGTCTACAAAGT 58.573 43.478 0.00 0.00 0.00 2.66
2542 2769 5.657302 AGTAGAGTGGTATGGGTCTACAAAG 59.343 44.000 10.19 0.00 42.57 2.77
2543 2770 5.586877 AGTAGAGTGGTATGGGTCTACAAA 58.413 41.667 10.19 0.00 42.57 2.83
2546 2773 5.534278 GGTTAGTAGAGTGGTATGGGTCTAC 59.466 48.000 0.00 0.00 41.11 2.59
2558 2785 3.650139 ACAACGCTTGGTTAGTAGAGTG 58.350 45.455 3.42 0.00 36.49 3.51
2559 2786 4.332428 AACAACGCTTGGTTAGTAGAGT 57.668 40.909 3.42 0.00 36.49 3.24
2569 2796 0.239879 ATACGGCAAACAACGCTTGG 59.760 50.000 0.00 0.00 34.12 3.61
2571 2798 0.948678 ACATACGGCAAACAACGCTT 59.051 45.000 0.00 0.00 0.00 4.68
2574 2801 3.372822 AGGATAACATACGGCAAACAACG 59.627 43.478 0.00 0.00 0.00 4.10
2585 2812 6.040878 AGTAACGCAACAGAGGATAACATAC 58.959 40.000 0.00 0.00 0.00 2.39
2594 2821 1.000955 ACAGGAGTAACGCAACAGAGG 59.999 52.381 0.00 0.00 0.00 3.69
2600 2827 3.462483 TTCAAGACAGGAGTAACGCAA 57.538 42.857 0.00 0.00 0.00 4.85
2604 2831 6.877611 TGGAATTTTCAAGACAGGAGTAAC 57.122 37.500 0.00 0.00 0.00 2.50
2607 2834 6.983906 AAATGGAATTTTCAAGACAGGAGT 57.016 33.333 0.00 0.00 46.10 3.85
2622 2849 2.543635 AGGAAGGCAGCAAAATGGAAT 58.456 42.857 0.00 0.00 0.00 3.01
2624 2851 1.619827 CAAGGAAGGCAGCAAAATGGA 59.380 47.619 0.00 0.00 0.00 3.41
2626 2853 1.345415 ACCAAGGAAGGCAGCAAAATG 59.655 47.619 0.00 0.00 0.00 2.32
2635 2862 1.200020 CGTGATTCAACCAAGGAAGGC 59.800 52.381 0.00 0.00 0.00 4.35
2636 2863 1.812571 CCGTGATTCAACCAAGGAAGG 59.187 52.381 0.00 0.00 35.60 3.46
2637 2864 2.484264 GTCCGTGATTCAACCAAGGAAG 59.516 50.000 0.00 0.00 42.24 3.46
2638 2865 2.500229 GTCCGTGATTCAACCAAGGAA 58.500 47.619 0.00 0.00 42.24 3.36
2639 2866 1.271163 GGTCCGTGATTCAACCAAGGA 60.271 52.381 1.83 0.00 39.30 3.36
2640 2867 1.165270 GGTCCGTGATTCAACCAAGG 58.835 55.000 1.83 0.00 35.03 3.61
2641 2868 2.076863 GAGGTCCGTGATTCAACCAAG 58.923 52.381 8.37 0.00 34.09 3.61
2642 2869 1.271163 GGAGGTCCGTGATTCAACCAA 60.271 52.381 8.37 0.00 34.09 3.67
2643 2870 0.323629 GGAGGTCCGTGATTCAACCA 59.676 55.000 8.37 0.00 34.09 3.67
2644 2871 0.323629 TGGAGGTCCGTGATTCAACC 59.676 55.000 0.00 0.00 39.43 3.77
2645 2872 1.002087 ACTGGAGGTCCGTGATTCAAC 59.998 52.381 0.00 0.00 39.43 3.18
2649 2876 0.608640 GACACTGGAGGTCCGTGATT 59.391 55.000 20.57 6.12 40.45 2.57
2654 2881 3.374402 AGCGACACTGGAGGTCCG 61.374 66.667 0.00 0.00 39.43 4.79
2693 2920 9.533253 GGCAACAGTATATTAAATGCTTCAATT 57.467 29.630 0.00 0.00 33.09 2.32
2695 2922 8.060931 TGGCAACAGTATATTAAATGCTTCAA 57.939 30.769 0.00 0.00 46.17 2.69
2696 2923 7.637631 TGGCAACAGTATATTAAATGCTTCA 57.362 32.000 0.00 0.00 46.17 3.02
2731 3251 1.136828 ACACTTGGGAACAGCCTACA 58.863 50.000 0.00 0.00 44.54 2.74
2732 3252 2.271944 AACACTTGGGAACAGCCTAC 57.728 50.000 0.00 0.00 44.54 3.18
2743 3263 4.695928 GGAGCTCCTAAAACTAACACTTGG 59.304 45.833 26.25 0.00 0.00 3.61
2744 3264 5.305585 TGGAGCTCCTAAAACTAACACTTG 58.694 41.667 32.28 0.00 36.82 3.16
2745 3265 5.071923 ACTGGAGCTCCTAAAACTAACACTT 59.928 40.000 32.28 0.00 36.82 3.16
2748 3268 5.163237 ACAACTGGAGCTCCTAAAACTAACA 60.163 40.000 32.28 8.10 36.82 2.41
2749 3269 5.179555 CACAACTGGAGCTCCTAAAACTAAC 59.820 44.000 32.28 3.29 36.82 2.34
2750 3270 5.163237 ACACAACTGGAGCTCCTAAAACTAA 60.163 40.000 32.28 9.62 36.82 2.24
2751 3271 4.347000 ACACAACTGGAGCTCCTAAAACTA 59.653 41.667 32.28 10.39 36.82 2.24
2752 3272 3.136626 ACACAACTGGAGCTCCTAAAACT 59.863 43.478 32.28 8.78 36.82 2.66
2753 3273 3.477530 ACACAACTGGAGCTCCTAAAAC 58.522 45.455 32.28 6.38 36.82 2.43
2754 3274 3.857157 ACACAACTGGAGCTCCTAAAA 57.143 42.857 32.28 12.33 36.82 1.52
2755 3275 3.260884 CCTACACAACTGGAGCTCCTAAA 59.739 47.826 32.28 12.71 36.82 1.85
2756 3276 2.832129 CCTACACAACTGGAGCTCCTAA 59.168 50.000 32.28 13.49 36.82 2.69
2757 3277 2.225293 ACCTACACAACTGGAGCTCCTA 60.225 50.000 32.28 17.97 36.82 2.94
2758 3278 1.270907 CCTACACAACTGGAGCTCCT 58.729 55.000 32.28 11.81 36.82 3.69
2759 3279 0.977395 ACCTACACAACTGGAGCTCC 59.023 55.000 26.78 26.78 0.00 4.70
2760 3280 1.941668 GCACCTACACAACTGGAGCTC 60.942 57.143 4.71 4.71 35.20 4.09
2761 3281 0.035458 GCACCTACACAACTGGAGCT 59.965 55.000 0.00 0.00 35.20 4.09
2796 3316 9.533831 AGAAGGACCAAAGTTTATTGTTGATAT 57.466 29.630 0.00 0.00 0.00 1.63
2798 3318 7.661040 CAGAAGGACCAAAGTTTATTGTTGAT 58.339 34.615 0.00 0.00 0.00 2.57
2801 3321 5.221441 GGCAGAAGGACCAAAGTTTATTGTT 60.221 40.000 0.00 0.00 0.00 2.83
2803 3323 4.280677 TGGCAGAAGGACCAAAGTTTATTG 59.719 41.667 0.00 0.00 31.46 1.90
2805 3325 4.112634 TGGCAGAAGGACCAAAGTTTAT 57.887 40.909 0.00 0.00 31.46 1.40
2806 3326 3.586470 TGGCAGAAGGACCAAAGTTTA 57.414 42.857 0.00 0.00 31.46 2.01
2807 3327 2.452600 TGGCAGAAGGACCAAAGTTT 57.547 45.000 0.00 0.00 31.46 2.66
2817 3379 1.815003 GGACAACTTGATGGCAGAAGG 59.185 52.381 12.28 0.00 0.00 3.46
2822 3384 1.071542 TCGAAGGACAACTTGATGGCA 59.928 47.619 0.00 0.00 40.21 4.92
2829 3391 1.128188 AGGCCCTCGAAGGACAACTT 61.128 55.000 9.06 0.00 43.65 2.66
2835 3397 1.705873 GATTCTAGGCCCTCGAAGGA 58.294 55.000 3.61 0.00 37.67 3.36
2842 3404 4.595350 GTGAAATAGAGGATTCTAGGCCCT 59.405 45.833 0.00 0.00 39.21 5.19
2843 3405 4.263112 GGTGAAATAGAGGATTCTAGGCCC 60.263 50.000 0.00 0.00 39.21 5.80
2845 3407 5.552870 TGGTGAAATAGAGGATTCTAGGC 57.447 43.478 0.00 0.00 39.21 3.93
2846 3408 7.072263 ACATGGTGAAATAGAGGATTCTAGG 57.928 40.000 0.00 0.00 39.21 3.02
2857 3665 8.090214 ACAAAAAGATCCAACATGGTGAAATAG 58.910 33.333 13.74 0.00 39.03 1.73
2859 3667 6.829849 ACAAAAAGATCCAACATGGTGAAAT 58.170 32.000 13.74 5.22 39.03 2.17
2860 3668 6.232581 ACAAAAAGATCCAACATGGTGAAA 57.767 33.333 13.74 0.00 39.03 2.69
2863 3671 5.846203 AGAACAAAAAGATCCAACATGGTG 58.154 37.500 2.91 2.91 39.03 4.17
2864 3672 6.098124 TGAAGAACAAAAAGATCCAACATGGT 59.902 34.615 0.00 0.00 39.03 3.55
2865 3673 6.514947 TGAAGAACAAAAAGATCCAACATGG 58.485 36.000 0.00 0.00 39.43 3.66
2866 3674 8.597662 AATGAAGAACAAAAAGATCCAACATG 57.402 30.769 0.00 0.00 0.00 3.21
2870 3678 9.709495 CCATAAATGAAGAACAAAAAGATCCAA 57.291 29.630 0.00 0.00 0.00 3.53
2871 3679 8.313292 CCCATAAATGAAGAACAAAAAGATCCA 58.687 33.333 0.00 0.00 0.00 3.41
2873 3681 9.358872 GTCCCATAAATGAAGAACAAAAAGATC 57.641 33.333 0.00 0.00 0.00 2.75
2874 3682 9.093458 AGTCCCATAAATGAAGAACAAAAAGAT 57.907 29.630 0.00 0.00 0.00 2.40
2880 4008 9.793259 GGATATAGTCCCATAAATGAAGAACAA 57.207 33.333 0.00 0.00 41.50 2.83
2903 4031 5.474578 AACTATACATGCAGACGATGGAT 57.525 39.130 0.00 0.00 41.28 3.41
2904 4032 4.937201 AACTATACATGCAGACGATGGA 57.063 40.909 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.