Multiple sequence alignment - TraesCS5B01G444600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G444600 chr5B 100.000 4468 0 0 1 4468 617053000 617048533 0.000000e+00 8251.0
1 TraesCS5B01G444600 chr5B 84.579 629 69 8 1097 1701 617038901 617038277 2.300000e-167 599.0
2 TraesCS5B01G444600 chr5B 86.120 317 44 0 1373 1689 617258787 617259103 4.280000e-90 342.0
3 TraesCS5B01G444600 chr5B 84.685 333 51 0 1373 1705 617284602 617284934 2.580000e-87 333.0
4 TraesCS5B01G444600 chr5B 95.882 170 6 1 1770 1938 43959396 43959227 1.580000e-69 274.0
5 TraesCS5B01G444600 chr5B 78.968 252 41 12 2145 2388 220583078 220583325 1.290000e-35 161.0
6 TraesCS5B01G444600 chr5B 78.049 205 37 8 2146 2345 665897630 665897429 6.070000e-24 122.0
7 TraesCS5B01G444600 chr5B 77.246 167 33 5 3972 4134 577376259 577376094 4.760000e-15 93.5
8 TraesCS5B01G444600 chr5D 94.393 1605 58 16 192 1771 497845831 497844234 0.000000e+00 2436.0
9 TraesCS5B01G444600 chr5D 92.520 976 49 13 1937 2898 497844229 497843264 0.000000e+00 1376.0
10 TraesCS5B01G444600 chr5D 94.630 689 31 5 2896 3579 497843217 497842530 0.000000e+00 1062.0
11 TraesCS5B01G444600 chr5D 80.632 728 76 35 1011 1718 497838053 497837371 1.860000e-138 503.0
12 TraesCS5B01G444600 chr5D 85.489 317 46 0 1373 1689 497957895 497958211 9.260000e-87 331.0
13 TraesCS5B01G444600 chr5D 98.378 185 3 0 1 185 497848357 497848173 4.310000e-85 326.0
14 TraesCS5B01G444600 chr5D 82.209 163 17 6 910 1060 497838264 497838102 3.630000e-26 130.0
15 TraesCS5B01G444600 chr5A 94.197 965 45 6 816 1771 621884608 621883646 0.000000e+00 1461.0
16 TraesCS5B01G444600 chr5A 93.735 830 34 9 2896 3714 621883011 621882189 0.000000e+00 1229.0
17 TraesCS5B01G444600 chr5A 81.975 810 99 25 910 1701 621867822 621867042 1.050000e-180 643.0
18 TraesCS5B01G444600 chr5A 91.368 475 31 6 1931 2402 621883647 621883180 3.770000e-180 641.0
19 TraesCS5B01G444600 chr5A 85.653 467 66 1 3834 4299 621882085 621881619 1.440000e-134 490.0
20 TraesCS5B01G444600 chr5A 86.435 317 43 0 1373 1689 622224980 622225296 9.200000e-92 348.0
21 TraesCS5B01G444600 chr5A 90.217 184 16 2 4286 4468 621876139 621875957 5.780000e-59 239.0
22 TraesCS5B01G444600 chr5A 99.180 122 1 0 2777 2898 621883179 621883058 2.090000e-53 220.0
23 TraesCS5B01G444600 chr5A 81.522 92 15 2 2769 2859 622151184 622151094 1.720000e-09 75.0
24 TraesCS5B01G444600 chr6B 95.833 168 5 2 1766 1932 606433851 606434017 2.050000e-68 270.0
25 TraesCS5B01G444600 chr6B 90.050 201 12 7 1738 1933 696483585 696483388 2.060000e-63 254.0
26 TraesCS5B01G444600 chr2B 94.828 174 6 3 1762 1933 548626646 548626818 7.370000e-68 268.0
27 TraesCS5B01G444600 chr2B 80.292 137 26 1 3993 4128 481118156 481118292 7.910000e-18 102.0
28 TraesCS5B01G444600 chr2B 86.000 50 6 1 400 449 94098302 94098254 8.000000e-03 52.8
29 TraesCS5B01G444600 chr7B 94.767 172 7 2 1770 1939 412800314 412800485 2.650000e-67 267.0
30 TraesCS5B01G444600 chr7B 100.000 28 0 0 4150 4177 595162462 595162435 8.000000e-03 52.8
31 TraesCS5B01G444600 chr7B 100.000 28 0 0 4150 4177 595162868 595162841 8.000000e-03 52.8
32 TraesCS5B01G444600 chr3B 93.370 181 10 2 1761 1939 455517911 455518091 2.650000e-67 267.0
33 TraesCS5B01G444600 chr4D 92.896 183 10 3 1755 1935 75782231 75782050 3.430000e-66 263.0
34 TraesCS5B01G444600 chr4D 93.258 178 10 2 1768 1943 404108576 404108753 1.230000e-65 261.0
35 TraesCS5B01G444600 chr4B 92.105 190 10 5 1765 1952 113961285 113961099 3.430000e-66 263.0
36 TraesCS5B01G444600 chr3A 73.061 245 60 6 3981 4224 674011105 674011344 1.030000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G444600 chr5B 617048533 617053000 4467 True 8251.0 8251 100.00000 1 4468 1 chr5B.!!$R4 4467
1 TraesCS5B01G444600 chr5B 617038277 617038901 624 True 599.0 599 84.57900 1097 1701 1 chr5B.!!$R3 604
2 TraesCS5B01G444600 chr5D 497842530 497848357 5827 True 1300.0 2436 94.98025 1 3579 4 chr5D.!!$R2 3578
3 TraesCS5B01G444600 chr5D 497837371 497838264 893 True 316.5 503 81.42050 910 1718 2 chr5D.!!$R1 808
4 TraesCS5B01G444600 chr5A 621881619 621884608 2989 True 808.2 1461 92.82660 816 4299 5 chr5A.!!$R4 3483
5 TraesCS5B01G444600 chr5A 621867042 621867822 780 True 643.0 643 81.97500 910 1701 1 chr5A.!!$R1 791

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
345 2681 0.034476 TGCTCACACCTGCTCTTCAG 59.966 55.0 0.00 0.00 42.49 3.02 F
386 2734 0.806102 CGTGGTTAGATCTGGTGGCG 60.806 60.0 5.18 1.04 0.00 5.69 F
1476 3991 0.248539 GTGCCGACGTCATAGAGGTC 60.249 60.0 17.16 9.19 41.98 3.85 F
2316 4836 0.470268 GTAGGAGAGGCCACCCCTAG 60.470 65.0 10.81 0.00 46.60 3.02 F
2566 5097 0.103937 CCACTGAAGAGGATCGGAGC 59.896 60.0 0.00 0.00 42.67 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1367 3882 0.666274 GATGAACGCCGTCTGTGTGA 60.666 55.000 0.00 0.0 37.86 3.58 R
2292 4812 1.354705 GGGTGGCCTCTCCTACTTTTT 59.645 52.381 3.32 0.0 35.26 1.94 R
2548 5079 0.103937 GGCTCCGATCCTCTTCAGTG 59.896 60.000 0.00 0.0 0.00 3.66 R
3451 6044 0.178068 GCTCTAACTCGCCCCAATGA 59.822 55.000 0.00 0.0 0.00 2.57 R
4360 6983 0.031449 TAACCAAAACGCAGCTTGGC 59.969 50.000 11.05 0.0 44.72 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 133 2.771943 AGCCGAGAAACCTCCATCATTA 59.228 45.455 0.00 0.00 0.00 1.90
135 136 5.071788 AGCCGAGAAACCTCCATCATTAATA 59.928 40.000 0.00 0.00 0.00 0.98
170 171 6.319658 ACTTGAAGACAATCAGTGTGAATTGT 59.680 34.615 8.07 8.07 41.96 2.71
185 186 7.498900 AGTGTGAATTGTGAAAGAGTTCATACA 59.501 33.333 13.18 0.00 45.38 2.29
186 187 7.800380 GTGTGAATTGTGAAAGAGTTCATACAG 59.200 37.037 7.95 0.00 45.38 2.74
187 188 7.498900 TGTGAATTGTGAAAGAGTTCATACAGT 59.501 33.333 0.00 0.00 45.38 3.55
188 189 7.800380 GTGAATTGTGAAAGAGTTCATACAGTG 59.200 37.037 0.00 0.00 45.38 3.66
189 190 6.808008 ATTGTGAAAGAGTTCATACAGTGG 57.192 37.500 0.00 0.00 45.38 4.00
217 2553 2.447443 TCAGTGGTGCTCTTCGAGTAT 58.553 47.619 0.00 0.00 31.39 2.12
244 2580 2.871096 TGAGTTTCCGGGCTACAAAT 57.129 45.000 0.00 0.00 0.00 2.32
264 2600 6.127026 ACAAATCCTAGGTCTGGTCATACTTC 60.127 42.308 9.08 0.00 0.00 3.01
268 2604 4.885907 CCTAGGTCTGGTCATACTTCGTTA 59.114 45.833 0.00 0.00 0.00 3.18
282 2618 3.063452 ACTTCGTTATACTTGGCAATGCG 59.937 43.478 0.00 0.00 0.00 4.73
293 2629 0.179200 GGCAATGCGGTGTTTAGACG 60.179 55.000 0.00 0.00 0.00 4.18
345 2681 0.034476 TGCTCACACCTGCTCTTCAG 59.966 55.000 0.00 0.00 42.49 3.02
386 2734 0.806102 CGTGGTTAGATCTGGTGGCG 60.806 60.000 5.18 1.04 0.00 5.69
421 2769 3.692101 TGTCGTTTTTCTTCTTGGAAGCA 59.308 39.130 2.74 0.00 0.00 3.91
439 2787 5.817296 GGAAGCATTGTTTTTGAAGAACCTT 59.183 36.000 0.00 0.00 0.00 3.50
529 2877 4.257267 GCAATTCCTTTTGTGCCTAACT 57.743 40.909 0.00 0.00 0.00 2.24
571 2919 5.178067 CACCTAGTCGTAATTTCGGTTTTGT 59.822 40.000 4.58 0.00 0.00 2.83
579 2927 7.639461 GTCGTAATTTCGGTTTTGTTTGACTTA 59.361 33.333 4.58 0.00 0.00 2.24
580 2928 8.344098 TCGTAATTTCGGTTTTGTTTGACTTAT 58.656 29.630 4.58 0.00 0.00 1.73
609 2958 3.496507 CCGATGTGATTTGTGTGTGTGTA 59.503 43.478 0.00 0.00 0.00 2.90
610 2959 4.154015 CCGATGTGATTTGTGTGTGTGTAT 59.846 41.667 0.00 0.00 0.00 2.29
619 2968 2.680339 TGTGTGTGTGTATGTGTTGGTG 59.320 45.455 0.00 0.00 0.00 4.17
620 2969 2.680841 GTGTGTGTGTATGTGTTGGTGT 59.319 45.455 0.00 0.00 0.00 4.16
623 2972 2.685388 TGTGTGTATGTGTTGGTGTTGG 59.315 45.455 0.00 0.00 0.00 3.77
624 2973 2.946329 GTGTGTATGTGTTGGTGTTGGA 59.054 45.455 0.00 0.00 0.00 3.53
625 2974 3.378742 GTGTGTATGTGTTGGTGTTGGAA 59.621 43.478 0.00 0.00 0.00 3.53
626 2975 3.378742 TGTGTATGTGTTGGTGTTGGAAC 59.621 43.478 0.00 0.00 0.00 3.62
628 2977 4.817464 GTGTATGTGTTGGTGTTGGAACTA 59.183 41.667 0.00 0.00 0.00 2.24
629 2978 5.472137 GTGTATGTGTTGGTGTTGGAACTAT 59.528 40.000 0.00 0.00 0.00 2.12
630 2979 5.471797 TGTATGTGTTGGTGTTGGAACTATG 59.528 40.000 0.00 0.00 0.00 2.23
632 2981 4.133820 TGTGTTGGTGTTGGAACTATGAG 58.866 43.478 0.00 0.00 0.00 2.90
642 2998 3.378512 TGGAACTATGAGCAGATCTGGT 58.621 45.455 26.78 26.78 44.89 4.00
674 3030 6.147164 TCGTTGTGTTTGTATCTCCTTGATTC 59.853 38.462 0.00 0.00 36.65 2.52
678 3034 9.567776 TTGTGTTTGTATCTCCTTGATTCTTTA 57.432 29.630 0.00 0.00 36.65 1.85
679 3035 9.739276 TGTGTTTGTATCTCCTTGATTCTTTAT 57.261 29.630 0.00 0.00 36.65 1.40
883 3249 5.065218 GCTATATAACAACAAGCACAGCACT 59.935 40.000 0.00 0.00 33.38 4.40
900 3266 3.894427 AGCACTCCATTCTACTCATCGAT 59.106 43.478 0.00 0.00 0.00 3.59
901 3267 4.343526 AGCACTCCATTCTACTCATCGATT 59.656 41.667 0.00 0.00 0.00 3.34
902 3268 4.447054 GCACTCCATTCTACTCATCGATTG 59.553 45.833 0.00 0.00 0.00 2.67
920 3286 3.423539 TTGCTCAGCATCCTACACTTT 57.576 42.857 0.00 0.00 38.76 2.66
924 3290 3.944015 GCTCAGCATCCTACACTTTGATT 59.056 43.478 0.00 0.00 0.00 2.57
956 3322 2.614057 CAAGTGTGTCCAGGTGTTCTTC 59.386 50.000 0.00 0.00 0.00 2.87
1067 3450 3.011517 GAGCCTCCAGGGAAGCCA 61.012 66.667 5.31 0.00 37.23 4.75
1314 3825 4.173256 GCAGCGCACCAAGTTTATTTTAT 58.827 39.130 11.47 0.00 0.00 1.40
1476 3991 0.248539 GTGCCGACGTCATAGAGGTC 60.249 60.000 17.16 9.19 41.98 3.85
1741 4259 1.539388 CGCAGGTGGTTCTTTATGCAA 59.461 47.619 0.00 0.00 33.33 4.08
1742 4260 2.030363 CGCAGGTGGTTCTTTATGCAAA 60.030 45.455 0.00 0.00 33.33 3.68
1771 4289 5.520632 TCGAAACATGCAGCTACTCTATAC 58.479 41.667 0.00 0.00 0.00 1.47
1772 4290 5.299531 TCGAAACATGCAGCTACTCTATACT 59.700 40.000 0.00 0.00 0.00 2.12
1773 4291 5.627367 CGAAACATGCAGCTACTCTATACTC 59.373 44.000 0.00 0.00 0.00 2.59
1775 4293 3.829601 ACATGCAGCTACTCTATACTCCC 59.170 47.826 0.00 0.00 0.00 4.30
1776 4294 2.877866 TGCAGCTACTCTATACTCCCC 58.122 52.381 0.00 0.00 0.00 4.81
1777 4295 2.172679 GCAGCTACTCTATACTCCCCC 58.827 57.143 0.00 0.00 0.00 5.40
1796 4314 5.452341 CCCCCTTCCTAAATACTTGTCTT 57.548 43.478 0.00 0.00 0.00 3.01
1797 4315 5.827756 CCCCCTTCCTAAATACTTGTCTTT 58.172 41.667 0.00 0.00 0.00 2.52
1798 4316 5.886474 CCCCCTTCCTAAATACTTGTCTTTC 59.114 44.000 0.00 0.00 0.00 2.62
1799 4317 6.297068 CCCCCTTCCTAAATACTTGTCTTTCT 60.297 42.308 0.00 0.00 0.00 2.52
1800 4318 7.092578 CCCCCTTCCTAAATACTTGTCTTTCTA 60.093 40.741 0.00 0.00 0.00 2.10
1801 4319 8.326529 CCCCTTCCTAAATACTTGTCTTTCTAA 58.673 37.037 0.00 0.00 0.00 2.10
1802 4320 9.734984 CCCTTCCTAAATACTTGTCTTTCTAAA 57.265 33.333 0.00 0.00 0.00 1.85
1827 4345 8.475331 AGATTTTAACAAGTGACTACATACGG 57.525 34.615 0.00 0.00 0.00 4.02
1828 4346 8.308931 AGATTTTAACAAGTGACTACATACGGA 58.691 33.333 0.00 0.00 0.00 4.69
1829 4347 8.836268 ATTTTAACAAGTGACTACATACGGAA 57.164 30.769 0.00 0.00 0.00 4.30
1830 4348 7.642071 TTTAACAAGTGACTACATACGGAAC 57.358 36.000 0.00 0.00 0.00 3.62
1831 4349 4.859304 ACAAGTGACTACATACGGAACA 57.141 40.909 0.00 0.00 0.00 3.18
1832 4350 5.204409 ACAAGTGACTACATACGGAACAA 57.796 39.130 0.00 0.00 0.00 2.83
1833 4351 5.603596 ACAAGTGACTACATACGGAACAAA 58.396 37.500 0.00 0.00 0.00 2.83
1834 4352 6.050432 ACAAGTGACTACATACGGAACAAAA 58.950 36.000 0.00 0.00 0.00 2.44
1835 4353 6.708949 ACAAGTGACTACATACGGAACAAAAT 59.291 34.615 0.00 0.00 0.00 1.82
1836 4354 6.721571 AGTGACTACATACGGAACAAAATG 57.278 37.500 0.00 0.00 0.00 2.32
1837 4355 6.460781 AGTGACTACATACGGAACAAAATGA 58.539 36.000 0.00 0.00 0.00 2.57
1838 4356 6.590292 AGTGACTACATACGGAACAAAATGAG 59.410 38.462 0.00 0.00 0.00 2.90
1839 4357 6.367969 GTGACTACATACGGAACAAAATGAGT 59.632 38.462 0.00 0.00 0.00 3.41
1840 4358 6.367695 TGACTACATACGGAACAAAATGAGTG 59.632 38.462 0.00 0.00 0.00 3.51
1841 4359 6.460781 ACTACATACGGAACAAAATGAGTGA 58.539 36.000 0.00 0.00 0.00 3.41
1842 4360 6.932400 ACTACATACGGAACAAAATGAGTGAA 59.068 34.615 0.00 0.00 0.00 3.18
1843 4361 6.817765 ACATACGGAACAAAATGAGTGAAT 57.182 33.333 0.00 0.00 0.00 2.57
1844 4362 6.842163 ACATACGGAACAAAATGAGTGAATC 58.158 36.000 0.00 0.00 0.00 2.52
1845 4363 6.655003 ACATACGGAACAAAATGAGTGAATCT 59.345 34.615 0.00 0.00 0.00 2.40
1846 4364 7.822334 ACATACGGAACAAAATGAGTGAATCTA 59.178 33.333 0.00 0.00 0.00 1.98
1847 4365 6.481954 ACGGAACAAAATGAGTGAATCTAC 57.518 37.500 0.00 0.00 0.00 2.59
1848 4366 5.995282 ACGGAACAAAATGAGTGAATCTACA 59.005 36.000 0.00 0.00 0.00 2.74
1849 4367 6.073222 ACGGAACAAAATGAGTGAATCTACAC 60.073 38.462 0.00 0.00 40.60 2.90
1884 4402 9.682465 ATGTCTATATACATCCGTATGTGTAGT 57.318 33.333 3.56 0.00 45.99 2.73
1885 4403 9.159364 TGTCTATATACATCCGTATGTGTAGTC 57.841 37.037 3.56 3.10 45.99 2.59
1886 4404 8.610896 GTCTATATACATCCGTATGTGTAGTCC 58.389 40.741 3.56 0.00 45.99 3.85
1887 4405 8.323567 TCTATATACATCCGTATGTGTAGTCCA 58.676 37.037 3.56 0.00 45.99 4.02
1888 4406 7.956328 ATATACATCCGTATGTGTAGTCCAT 57.044 36.000 3.56 0.00 45.99 3.41
1889 4407 6.665992 ATACATCCGTATGTGTAGTCCATT 57.334 37.500 3.56 0.00 45.99 3.16
1890 4408 5.353394 ACATCCGTATGTGTAGTCCATTT 57.647 39.130 0.00 0.00 44.79 2.32
1891 4409 5.116180 ACATCCGTATGTGTAGTCCATTTG 58.884 41.667 0.00 0.00 44.79 2.32
1892 4410 5.105106 ACATCCGTATGTGTAGTCCATTTGA 60.105 40.000 0.00 0.00 44.79 2.69
1893 4411 5.408880 TCCGTATGTGTAGTCCATTTGAA 57.591 39.130 0.00 0.00 0.00 2.69
1894 4412 5.795972 TCCGTATGTGTAGTCCATTTGAAA 58.204 37.500 0.00 0.00 0.00 2.69
1895 4413 6.411376 TCCGTATGTGTAGTCCATTTGAAAT 58.589 36.000 0.00 0.00 0.00 2.17
1896 4414 6.537301 TCCGTATGTGTAGTCCATTTGAAATC 59.463 38.462 0.00 0.00 0.00 2.17
1897 4415 6.538742 CCGTATGTGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 0.00 2.40
1898 4416 7.254455 CCGTATGTGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 0.00 2.75
1899 4417 7.492669 CGTATGTGTAGTCCATTTGAAATCTCT 59.507 37.037 0.00 0.00 0.00 3.10
1900 4418 9.817809 GTATGTGTAGTCCATTTGAAATCTCTA 57.182 33.333 0.00 0.00 0.00 2.43
1901 4419 8.954950 ATGTGTAGTCCATTTGAAATCTCTAG 57.045 34.615 0.00 0.00 0.00 2.43
1902 4420 8.134202 TGTGTAGTCCATTTGAAATCTCTAGA 57.866 34.615 0.00 0.00 0.00 2.43
1903 4421 8.593679 TGTGTAGTCCATTTGAAATCTCTAGAA 58.406 33.333 0.00 0.00 0.00 2.10
1904 4422 9.436957 GTGTAGTCCATTTGAAATCTCTAGAAA 57.563 33.333 0.00 0.00 0.00 2.52
1905 4423 9.658799 TGTAGTCCATTTGAAATCTCTAGAAAG 57.341 33.333 0.00 0.00 0.00 2.62
1906 4424 9.877178 GTAGTCCATTTGAAATCTCTAGAAAGA 57.123 33.333 0.00 0.00 0.00 2.52
1907 4425 8.785329 AGTCCATTTGAAATCTCTAGAAAGAC 57.215 34.615 0.00 0.00 0.00 3.01
1908 4426 8.378565 AGTCCATTTGAAATCTCTAGAAAGACA 58.621 33.333 0.00 0.00 0.00 3.41
1909 4427 9.003658 GTCCATTTGAAATCTCTAGAAAGACAA 57.996 33.333 0.00 0.00 0.00 3.18
1910 4428 9.573166 TCCATTTGAAATCTCTAGAAAGACAAA 57.427 29.630 0.00 4.41 0.00 2.83
1926 4444 8.947115 AGAAAGACAAATATTTAGAAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
1927 4445 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
1928 4446 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
1929 4447 7.048512 AGACAAATATTTAGAAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
1930 4448 6.718294 ACAAATATTTAGAAACGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
1931 4449 7.854337 ACAAATATTTAGAAACGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
1932 4450 8.491958 ACAAATATTTAGAAACGGAGGGAGTAT 58.508 33.333 0.00 0.00 0.00 2.12
1933 4451 9.338622 CAAATATTTAGAAACGGAGGGAGTATT 57.661 33.333 0.00 0.00 0.00 1.89
1934 4452 9.916360 AAATATTTAGAAACGGAGGGAGTATTT 57.084 29.630 0.00 0.00 0.00 1.40
1935 4453 9.916360 AATATTTAGAAACGGAGGGAGTATTTT 57.084 29.630 0.00 0.00 0.00 1.82
1936 4454 9.916360 ATATTTAGAAACGGAGGGAGTATTTTT 57.084 29.630 0.00 0.00 0.00 1.94
2042 4561 7.147966 TGGAGTTACTAATTCGCTCTTCATGTA 60.148 37.037 0.00 0.00 0.00 2.29
2143 4662 5.589192 GAGCTGGTATGTCTAATAACACGT 58.411 41.667 0.00 0.00 30.55 4.49
2190 4709 3.915437 ATAAAGGCACAAACGACCAAG 57.085 42.857 0.00 0.00 0.00 3.61
2193 4712 2.051345 GCACAAACGACCAAGCCG 60.051 61.111 0.00 0.00 0.00 5.52
2204 4723 3.813166 ACGACCAAGCCGATATAAAATGG 59.187 43.478 0.00 0.00 0.00 3.16
2213 4732 7.492352 AGCCGATATAAAATGGTGAGTAAAC 57.508 36.000 0.00 0.00 0.00 2.01
2225 4744 2.552743 GTGAGTAAACCCTCTTGCAACC 59.447 50.000 0.00 0.00 32.50 3.77
2288 4808 0.481128 CCCCTAACCCAACACCAAGT 59.519 55.000 0.00 0.00 0.00 3.16
2292 4812 3.009695 CCCTAACCCAACACCAAGTATGA 59.990 47.826 0.00 0.00 0.00 2.15
2316 4836 0.470268 GTAGGAGAGGCCACCCCTAG 60.470 65.000 10.81 0.00 46.60 3.02
2342 4862 5.363005 ACACTACAACCAAGAGTACAGAAGT 59.637 40.000 0.00 0.00 0.00 3.01
2403 4924 4.857799 GAGAACCTCGTATGCCTAGTAAC 58.142 47.826 0.00 0.00 0.00 2.50
2408 4938 2.034124 TCGTATGCCTAGTAACACCCC 58.966 52.381 0.00 0.00 0.00 4.95
2428 4958 2.081462 CCCTAGGTAAAGGCACAAACG 58.919 52.381 8.29 0.00 35.09 3.60
2432 4962 1.134037 AGGTAAAGGCACAAACGACCA 60.134 47.619 0.00 0.00 0.00 4.02
2436 4966 3.535280 AAAGGCACAAACGACCAAAAT 57.465 38.095 0.00 0.00 0.00 1.82
2489 5020 6.620733 GCAAGCTGCTAGTCGAAAGAAAAATA 60.621 38.462 0.90 0.00 40.80 1.40
2499 5030 5.980715 GTCGAAAGAAAAATAAAAGGCACCA 59.019 36.000 0.00 0.00 45.01 4.17
2533 5064 0.605589 GTGCAGACCACCCCTAACAC 60.606 60.000 0.00 0.00 38.55 3.32
2538 5069 2.028385 CAGACCACCCCTAACACACTAC 60.028 54.545 0.00 0.00 0.00 2.73
2544 5075 4.505918 CCACCCCTAACACACTACAATCAA 60.506 45.833 0.00 0.00 0.00 2.57
2548 5079 4.935808 CCCTAACACACTACAATCAAGACC 59.064 45.833 0.00 0.00 0.00 3.85
2559 5090 3.648067 ACAATCAAGACCACTGAAGAGGA 59.352 43.478 0.41 0.00 0.00 3.71
2560 5091 4.288105 ACAATCAAGACCACTGAAGAGGAT 59.712 41.667 0.41 0.00 0.00 3.24
2566 5097 0.103937 CCACTGAAGAGGATCGGAGC 59.896 60.000 0.00 0.00 42.67 4.70
2587 5118 1.315690 ATGCCGGCATGAGAAATCAG 58.684 50.000 40.10 0.00 35.03 2.90
2591 5122 2.905075 CCGGCATGAGAAATCAGTGTA 58.095 47.619 0.00 0.00 0.00 2.90
2592 5123 2.609459 CCGGCATGAGAAATCAGTGTAC 59.391 50.000 0.00 0.00 0.00 2.90
2593 5124 2.609459 CGGCATGAGAAATCAGTGTACC 59.391 50.000 0.00 0.00 0.00 3.34
2594 5125 2.945668 GGCATGAGAAATCAGTGTACCC 59.054 50.000 0.00 0.00 0.00 3.69
2595 5126 2.945668 GCATGAGAAATCAGTGTACCCC 59.054 50.000 0.00 0.00 0.00 4.95
2596 5127 3.198068 CATGAGAAATCAGTGTACCCCG 58.802 50.000 0.00 0.00 0.00 5.73
2615 5146 0.969894 GACCCCGAGGACCTCATATG 59.030 60.000 21.49 8.75 36.73 1.78
2637 5168 5.826643 TGCCTAATAACACCTTGGAGATTT 58.173 37.500 0.00 0.00 0.00 2.17
2745 5277 6.164176 AGCATTAACAGTGTAGTTGTACTCC 58.836 40.000 0.00 0.00 33.07 3.85
3093 5675 6.836527 AGTCTAGCTATATTGTGACTGTCCTT 59.163 38.462 9.56 0.00 34.09 3.36
3100 5682 7.010923 GCTATATTGTGACTGTCCTTCAAGAAG 59.989 40.741 5.17 2.83 38.14 2.85
3197 5779 6.992715 CCTGACCATATTAGACAGGTAAAAGG 59.007 42.308 10.92 0.00 41.91 3.11
3198 5780 7.365652 CCTGACCATATTAGACAGGTAAAAGGT 60.366 40.741 10.92 0.00 41.91 3.50
3296 5881 1.616159 ATTGCCTAACGGTTGCAACT 58.384 45.000 27.64 12.01 46.60 3.16
3302 5895 2.151202 CTAACGGTTGCAACTGGATGT 58.849 47.619 35.25 21.93 39.62 3.06
3362 5955 2.016961 CAGCGCGATGGTAAAGCAT 58.983 52.632 18.26 0.00 0.00 3.79
3466 6059 1.134220 GTCCATCATTGGGGCGAGTTA 60.134 52.381 0.00 0.00 43.81 2.24
3468 6061 1.140852 CCATCATTGGGGCGAGTTAGA 59.859 52.381 0.00 0.00 39.56 2.10
3474 6067 2.416432 GGGGCGAGTTAGAGCGACT 61.416 63.158 0.00 0.00 35.46 4.18
3528 6121 1.550179 CCCCTGTCTAGTGACCAGTGA 60.550 57.143 0.00 0.00 42.28 3.41
3579 6173 2.270986 GCCCTGGCAAACCTCAGTG 61.271 63.158 2.58 0.00 41.49 3.66
3589 6183 1.343069 AACCTCAGTGTCTCTGGGTC 58.657 55.000 12.57 0.00 42.75 4.46
3608 6202 3.159213 TCCATCACTGGATGCACTTTT 57.841 42.857 0.00 0.00 46.95 2.27
3609 6203 3.084039 TCCATCACTGGATGCACTTTTC 58.916 45.455 0.00 0.00 46.95 2.29
3610 6204 3.498301 TCCATCACTGGATGCACTTTTCA 60.498 43.478 0.00 0.00 46.95 2.69
3611 6205 4.092771 CATCACTGGATGCACTTTTCAG 57.907 45.455 0.00 0.00 44.03 3.02
3612 6206 2.507484 TCACTGGATGCACTTTTCAGG 58.493 47.619 0.00 0.00 0.00 3.86
3613 6207 2.106338 TCACTGGATGCACTTTTCAGGA 59.894 45.455 0.00 0.00 0.00 3.86
3615 6209 3.508793 CACTGGATGCACTTTTCAGGATT 59.491 43.478 0.00 0.00 0.00 3.01
3616 6210 4.701651 CACTGGATGCACTTTTCAGGATTA 59.298 41.667 0.00 0.00 0.00 1.75
3617 6211 5.359009 CACTGGATGCACTTTTCAGGATTAT 59.641 40.000 0.00 0.00 0.00 1.28
3618 6212 5.359009 ACTGGATGCACTTTTCAGGATTATG 59.641 40.000 0.00 0.00 0.00 1.90
3619 6213 5.263599 TGGATGCACTTTTCAGGATTATGT 58.736 37.500 0.00 0.00 0.00 2.29
3620 6214 6.422333 TGGATGCACTTTTCAGGATTATGTA 58.578 36.000 0.00 0.00 0.00 2.29
3622 6216 7.560991 TGGATGCACTTTTCAGGATTATGTAAT 59.439 33.333 0.00 0.00 0.00 1.89
3623 6217 9.066892 GGATGCACTTTTCAGGATTATGTAATA 57.933 33.333 0.00 0.00 0.00 0.98
3626 6220 9.407380 TGCACTTTTCAGGATTATGTAATATGT 57.593 29.630 0.00 0.00 0.00 2.29
3708 6302 3.897141 TGGCAAATGATAGTCGTGGTA 57.103 42.857 0.00 0.00 0.00 3.25
3710 6304 3.196901 TGGCAAATGATAGTCGTGGTAGT 59.803 43.478 0.00 0.00 0.00 2.73
3754 6376 2.102588 ACGGTTGTACATATGCTCCTCC 59.897 50.000 1.58 0.01 0.00 4.30
3812 6434 8.039603 TGATTTGTGCTTATTACTTACAGTGG 57.960 34.615 0.00 0.00 0.00 4.00
3813 6435 6.811253 TTTGTGCTTATTACTTACAGTGGG 57.189 37.500 0.00 0.00 0.00 4.61
3814 6436 4.839121 TGTGCTTATTACTTACAGTGGGG 58.161 43.478 0.00 0.00 0.00 4.96
3815 6437 4.287585 TGTGCTTATTACTTACAGTGGGGT 59.712 41.667 0.00 0.00 0.00 4.95
3816 6438 5.221966 TGTGCTTATTACTTACAGTGGGGTT 60.222 40.000 0.00 0.00 0.00 4.11
3817 6439 5.708697 GTGCTTATTACTTACAGTGGGGTTT 59.291 40.000 0.00 0.00 0.00 3.27
3818 6440 6.208007 GTGCTTATTACTTACAGTGGGGTTTT 59.792 38.462 0.00 0.00 0.00 2.43
3819 6441 7.391275 GTGCTTATTACTTACAGTGGGGTTTTA 59.609 37.037 0.00 0.00 0.00 1.52
3820 6442 7.391275 TGCTTATTACTTACAGTGGGGTTTTAC 59.609 37.037 0.00 0.00 0.00 2.01
3821 6443 7.148188 GCTTATTACTTACAGTGGGGTTTTACC 60.148 40.741 0.00 0.00 37.60 2.85
3838 6460 8.951787 GGTTTTACCCTACTTCAAAAATTTGT 57.048 30.769 5.84 0.00 34.36 2.83
3839 6461 8.822855 GGTTTTACCCTACTTCAAAAATTTGTG 58.177 33.333 1.55 1.55 34.36 3.33
3840 6462 8.332464 GTTTTACCCTACTTCAAAAATTTGTGC 58.668 33.333 3.24 0.00 39.18 4.57
3853 6475 7.543868 TCAAAAATTTGTGCTTATTACCATCGG 59.456 33.333 3.24 0.00 39.18 4.18
3856 6478 3.469008 TGTGCTTATTACCATCGGGAG 57.531 47.619 0.00 0.00 38.05 4.30
3859 6481 4.591498 TGTGCTTATTACCATCGGGAGTAT 59.409 41.667 0.00 0.00 38.05 2.12
3865 6487 7.494952 GCTTATTACCATCGGGAGTATTTATCC 59.505 40.741 0.00 0.00 38.05 2.59
3900 6522 6.731164 CGGTAAAAATAAGGACGCCAATAAT 58.269 36.000 0.00 0.00 0.00 1.28
3908 6530 1.949525 GGACGCCAATAATGAGCACAT 59.050 47.619 0.00 0.00 38.50 3.21
3931 6553 2.256117 AACTTAGCGTGGCTCAGTTT 57.744 45.000 10.49 0.00 46.63 2.66
3933 6555 0.166814 CTTAGCGTGGCTCAGTTTGC 59.833 55.000 0.00 0.00 40.44 3.68
3944 6566 4.644685 TGGCTCAGTTTGCTAAGTTTCTTT 59.355 37.500 0.00 0.00 0.00 2.52
3954 6576 6.084326 TGCTAAGTTTCTTTTGATGGAACC 57.916 37.500 0.00 0.00 0.00 3.62
3958 6580 5.520376 AGTTTCTTTTGATGGAACCAGTG 57.480 39.130 0.00 0.00 0.00 3.66
3967 6589 2.745037 GAACCAGTGCACCGGGTA 59.255 61.111 25.91 0.00 33.71 3.69
3971 6593 0.468226 ACCAGTGCACCGGGTATATG 59.532 55.000 24.84 9.82 31.89 1.78
3974 6596 0.756903 AGTGCACCGGGTATATGTCC 59.243 55.000 14.63 0.00 0.00 4.02
3986 6608 5.246307 GGGTATATGTCCTAGATTTGGCAC 58.754 45.833 0.00 0.00 0.00 5.01
3991 6613 2.027192 TGTCCTAGATTTGGCACTGGTC 60.027 50.000 0.00 0.00 0.00 4.02
3997 6619 2.410322 ATTTGGCACTGGTCCTCGCA 62.410 55.000 0.00 0.00 0.00 5.10
4018 6640 9.891535 CTCGCATTTTTCTGAATTTATTTTAGC 57.108 29.630 0.00 0.00 0.00 3.09
4035 6657 5.759506 TTTAGCCTTTTCGACAATGTTCA 57.240 34.783 0.00 0.00 0.00 3.18
4040 6662 4.618489 GCCTTTTCGACAATGTTCATTCAG 59.382 41.667 0.00 0.00 0.00 3.02
4044 6666 4.001618 TCGACAATGTTCATTCAGTGGA 57.998 40.909 0.00 0.00 37.66 4.02
4047 6669 4.378770 CGACAATGTTCATTCAGTGGAAGG 60.379 45.833 0.00 0.00 37.66 3.46
4055 6677 3.261897 TCATTCAGTGGAAGGAGAAGTCC 59.738 47.826 0.00 0.00 38.77 3.85
4073 6695 2.442188 CCGTCGACTACAAAGCGCC 61.442 63.158 14.70 0.00 0.00 6.53
4075 6697 0.179181 CGTCGACTACAAAGCGCCTA 60.179 55.000 14.70 0.00 0.00 3.93
4078 6700 1.746787 TCGACTACAAAGCGCCTATGA 59.253 47.619 2.29 0.00 0.00 2.15
4080 6702 3.566742 TCGACTACAAAGCGCCTATGATA 59.433 43.478 2.29 0.00 0.00 2.15
4084 6706 5.290386 ACTACAAAGCGCCTATGATAACTC 58.710 41.667 2.29 0.00 0.00 3.01
4094 6716 5.164954 GCCTATGATAACTCCGTCAATCTC 58.835 45.833 0.00 0.00 0.00 2.75
4102 6724 9.045223 TGATAACTCCGTCAATCTCAAAATATG 57.955 33.333 0.00 0.00 0.00 1.78
4108 6730 5.008911 CCGTCAATCTCAAAATATGATGCCA 59.991 40.000 0.00 0.00 37.44 4.92
4109 6731 6.140786 CGTCAATCTCAAAATATGATGCCAG 58.859 40.000 0.00 0.00 37.44 4.85
4121 6743 4.635699 ATGATGCCAGCTCATTATCTCA 57.364 40.909 0.00 0.00 28.98 3.27
4125 6747 3.548770 TGCCAGCTCATTATCTCAAAGG 58.451 45.455 0.00 0.00 0.00 3.11
4130 6752 4.639310 CAGCTCATTATCTCAAAGGTGCTT 59.361 41.667 0.00 0.00 37.75 3.91
4134 6756 8.213679 AGCTCATTATCTCAAAGGTGCTTATAA 58.786 33.333 0.00 0.00 36.83 0.98
4135 6757 8.840321 GCTCATTATCTCAAAGGTGCTTATAAA 58.160 33.333 0.00 0.00 29.74 1.40
4184 6806 9.793259 TCATAGAGATGAGTGTATGTATGTGTA 57.207 33.333 0.00 0.00 37.15 2.90
4219 6841 8.402798 ACATCCATGATTGTACTGTGTTAAAA 57.597 30.769 0.00 0.00 0.00 1.52
4220 6842 8.514594 ACATCCATGATTGTACTGTGTTAAAAG 58.485 33.333 0.00 0.00 0.00 2.27
4235 6857 5.005299 GTGTTAAAAGAAACAAGCGCACATT 59.995 36.000 11.47 0.00 40.85 2.71
4284 6907 2.286125 CGAAGTTTCATGCACGTGAACA 60.286 45.455 22.23 9.27 37.80 3.18
4288 6911 3.128589 AGTTTCATGCACGTGAACAAAGT 59.871 39.130 22.23 11.71 37.80 2.66
4292 6915 2.535934 TGCACGTGAACAAAGTGAAC 57.464 45.000 22.23 0.00 38.06 3.18
4299 6922 3.247648 CGTGAACAAAGTGAACCTAGGTG 59.752 47.826 17.14 3.18 0.00 4.00
4300 6923 4.448210 GTGAACAAAGTGAACCTAGGTGA 58.552 43.478 17.14 1.91 0.00 4.02
4301 6924 4.511826 GTGAACAAAGTGAACCTAGGTGAG 59.488 45.833 17.14 3.22 0.00 3.51
4302 6925 4.407621 TGAACAAAGTGAACCTAGGTGAGA 59.592 41.667 17.14 0.00 0.00 3.27
4303 6926 4.608948 ACAAAGTGAACCTAGGTGAGAG 57.391 45.455 17.14 4.87 0.00 3.20
4304 6927 4.223953 ACAAAGTGAACCTAGGTGAGAGA 58.776 43.478 17.14 0.00 0.00 3.10
4305 6928 4.282195 ACAAAGTGAACCTAGGTGAGAGAG 59.718 45.833 17.14 6.05 0.00 3.20
4306 6929 2.452505 AGTGAACCTAGGTGAGAGAGC 58.547 52.381 17.14 2.15 0.00 4.09
4307 6930 2.042433 AGTGAACCTAGGTGAGAGAGCT 59.958 50.000 17.14 4.50 36.09 4.09
4308 6931 2.425668 GTGAACCTAGGTGAGAGAGCTC 59.574 54.545 17.14 5.27 41.67 4.09
4309 6932 2.028876 GAACCTAGGTGAGAGAGCTCC 58.971 57.143 17.14 1.70 40.55 4.70
4310 6933 1.304891 ACCTAGGTGAGAGAGCTCCT 58.695 55.000 15.42 7.30 40.55 3.69
4311 6934 2.494158 ACCTAGGTGAGAGAGCTCCTA 58.506 52.381 15.42 3.12 40.55 2.94
4312 6935 2.441750 ACCTAGGTGAGAGAGCTCCTAG 59.558 54.545 15.42 13.03 45.29 3.02
4313 6936 3.140325 CTAGGTGAGAGAGCTCCTAGG 57.860 57.143 10.93 0.82 43.47 3.02
4314 6937 0.106217 AGGTGAGAGAGCTCCTAGGC 60.106 60.000 10.93 0.00 40.55 3.93
4315 6938 1.452145 GGTGAGAGAGCTCCTAGGCG 61.452 65.000 10.93 0.00 40.55 5.52
4316 6939 0.750182 GTGAGAGAGCTCCTAGGCGT 60.750 60.000 10.93 0.00 40.55 5.68
4317 6940 0.464735 TGAGAGAGCTCCTAGGCGTC 60.465 60.000 10.93 0.00 40.55 5.19
4318 6941 0.464735 GAGAGAGCTCCTAGGCGTCA 60.465 60.000 10.93 0.00 35.01 4.35
4319 6942 0.465460 AGAGAGCTCCTAGGCGTCAG 60.465 60.000 10.93 0.00 37.29 3.51
4320 6943 0.750182 GAGAGCTCCTAGGCGTCAGT 60.750 60.000 10.93 0.00 37.29 3.41
4321 6944 0.323908 AGAGCTCCTAGGCGTCAGTT 60.324 55.000 10.93 0.00 37.29 3.16
4322 6945 0.179124 GAGCTCCTAGGCGTCAGTTG 60.179 60.000 2.96 0.00 37.29 3.16
4323 6946 0.612174 AGCTCCTAGGCGTCAGTTGA 60.612 55.000 2.96 0.00 37.29 3.18
4324 6947 0.179124 GCTCCTAGGCGTCAGTTGAG 60.179 60.000 2.96 0.00 0.00 3.02
4325 6948 0.179124 CTCCTAGGCGTCAGTTGAGC 60.179 60.000 2.96 0.00 0.00 4.26
4326 6949 0.612174 TCCTAGGCGTCAGTTGAGCT 60.612 55.000 2.96 0.00 0.00 4.09
4327 6950 1.103803 CCTAGGCGTCAGTTGAGCTA 58.896 55.000 0.00 0.00 0.00 3.32
4328 6951 1.476891 CCTAGGCGTCAGTTGAGCTAA 59.523 52.381 0.00 0.00 0.00 3.09
4329 6952 2.531206 CTAGGCGTCAGTTGAGCTAAC 58.469 52.381 0.00 0.00 39.65 2.34
4336 6959 4.285851 GTTGAGCTAACTGGCGCT 57.714 55.556 7.64 0.00 39.61 5.92
4340 6963 2.125912 AGCTAACTGGCGCTCACG 60.126 61.111 7.64 1.00 44.07 4.35
4351 6974 2.050985 GCTCACGCGCAAAAGCTT 60.051 55.556 5.73 0.00 34.40 3.74
4352 6975 1.206578 GCTCACGCGCAAAAGCTTA 59.793 52.632 5.73 0.00 34.40 3.09
4353 6976 0.179189 GCTCACGCGCAAAAGCTTAT 60.179 50.000 5.73 0.00 34.40 1.73
4354 6977 1.527696 CTCACGCGCAAAAGCTTATG 58.472 50.000 5.73 0.00 34.40 1.90
4355 6978 0.167908 TCACGCGCAAAAGCTTATGG 59.832 50.000 5.73 0.00 34.40 2.74
4356 6979 0.798009 CACGCGCAAAAGCTTATGGG 60.798 55.000 5.73 1.04 34.40 4.00
4357 6980 4.093115 GCGCAAAAGCTTATGGGC 57.907 55.556 0.30 0.14 46.05 5.36
4358 6981 1.519234 GCGCAAAAGCTTATGGGCC 60.519 57.895 0.30 0.00 46.28 5.80
4359 6982 1.226660 CGCAAAAGCTTATGGGCCG 60.227 57.895 0.00 0.00 0.00 6.13
4360 6983 1.141665 GCAAAAGCTTATGGGCCGG 59.858 57.895 0.00 0.00 0.00 6.13
4361 6984 1.141665 CAAAAGCTTATGGGCCGGC 59.858 57.895 21.18 21.18 0.00 6.13
4362 6985 2.058001 AAAAGCTTATGGGCCGGCC 61.058 57.895 38.57 38.57 0.00 6.13
4363 6986 2.796734 AAAAGCTTATGGGCCGGCCA 62.797 55.000 44.46 30.82 37.98 5.36
4364 6987 2.796734 AAAGCTTATGGGCCGGCCAA 62.797 55.000 44.46 37.76 37.98 4.52
4365 6988 3.219198 GCTTATGGGCCGGCCAAG 61.219 66.667 44.46 36.64 37.98 3.61
4366 6989 3.219198 CTTATGGGCCGGCCAAGC 61.219 66.667 44.46 28.85 37.98 4.01
4367 6990 3.721370 CTTATGGGCCGGCCAAGCT 62.721 63.158 44.46 27.25 37.98 3.74
4368 6991 4.504596 TATGGGCCGGCCAAGCTG 62.505 66.667 44.46 0.00 37.98 4.24
4374 6997 3.977244 CCGGCCAAGCTGCGTTTT 61.977 61.111 2.24 0.00 32.89 2.43
4375 6998 2.730604 CGGCCAAGCTGCGTTTTG 60.731 61.111 2.24 0.00 0.00 2.44
4376 6999 2.356194 GGCCAAGCTGCGTTTTGG 60.356 61.111 13.18 13.18 45.28 3.28
4377 7000 2.417097 GCCAAGCTGCGTTTTGGT 59.583 55.556 17.25 0.00 44.52 3.67
4378 7001 1.227234 GCCAAGCTGCGTTTTGGTT 60.227 52.632 17.25 0.00 44.52 3.67
4379 7002 0.031449 GCCAAGCTGCGTTTTGGTTA 59.969 50.000 17.25 0.00 44.52 2.85
4380 7003 1.537135 GCCAAGCTGCGTTTTGGTTAA 60.537 47.619 17.25 0.00 44.52 2.01
4381 7004 2.815478 CCAAGCTGCGTTTTGGTTAAA 58.185 42.857 10.15 0.00 39.18 1.52
4382 7005 3.389221 CCAAGCTGCGTTTTGGTTAAAT 58.611 40.909 10.15 0.00 39.18 1.40
4383 7006 3.428534 CCAAGCTGCGTTTTGGTTAAATC 59.571 43.478 10.15 0.00 39.18 2.17
4384 7007 4.047822 CAAGCTGCGTTTTGGTTAAATCA 58.952 39.130 0.00 0.00 0.00 2.57
4385 7008 3.900941 AGCTGCGTTTTGGTTAAATCAG 58.099 40.909 0.00 0.00 34.78 2.90
4386 7009 3.317993 AGCTGCGTTTTGGTTAAATCAGT 59.682 39.130 0.00 0.00 34.46 3.41
4387 7010 4.048504 GCTGCGTTTTGGTTAAATCAGTT 58.951 39.130 0.00 0.00 34.46 3.16
4388 7011 4.085107 GCTGCGTTTTGGTTAAATCAGTTG 60.085 41.667 0.00 0.00 34.46 3.16
4389 7012 5.250235 TGCGTTTTGGTTAAATCAGTTGA 57.750 34.783 0.00 0.00 0.00 3.18
4390 7013 5.038033 TGCGTTTTGGTTAAATCAGTTGAC 58.962 37.500 0.00 0.00 0.00 3.18
4391 7014 5.163602 TGCGTTTTGGTTAAATCAGTTGACT 60.164 36.000 0.00 0.00 0.00 3.41
4392 7015 5.173131 GCGTTTTGGTTAAATCAGTTGACTG 59.827 40.000 4.77 4.77 45.08 3.51
4393 7016 5.685511 CGTTTTGGTTAAATCAGTTGACTGG 59.314 40.000 10.97 0.00 43.91 4.00
4394 7017 6.569780 GTTTTGGTTAAATCAGTTGACTGGT 58.430 36.000 10.97 0.89 43.91 4.00
4395 7018 5.766150 TTGGTTAAATCAGTTGACTGGTG 57.234 39.130 10.97 0.00 43.91 4.17
4396 7019 4.141287 TGGTTAAATCAGTTGACTGGTGG 58.859 43.478 10.97 0.00 43.91 4.61
4397 7020 4.141367 TGGTTAAATCAGTTGACTGGTGGA 60.141 41.667 10.97 0.00 43.91 4.02
4398 7021 4.215613 GGTTAAATCAGTTGACTGGTGGAC 59.784 45.833 10.97 4.44 43.91 4.02
4399 7022 2.568623 AATCAGTTGACTGGTGGACC 57.431 50.000 10.97 0.00 43.91 4.46
4400 7023 1.434188 ATCAGTTGACTGGTGGACCA 58.566 50.000 10.97 0.00 43.91 4.02
4401 7024 1.208706 TCAGTTGACTGGTGGACCAA 58.791 50.000 10.97 0.00 46.97 3.67
4402 7025 1.774254 TCAGTTGACTGGTGGACCAAT 59.226 47.619 10.97 0.00 46.97 3.16
4403 7026 1.881973 CAGTTGACTGGTGGACCAATG 59.118 52.381 0.00 0.00 46.97 2.82
4404 7027 1.774254 AGTTGACTGGTGGACCAATGA 59.226 47.619 0.00 0.00 46.97 2.57
4405 7028 1.880027 GTTGACTGGTGGACCAATGAC 59.120 52.381 0.00 0.00 46.97 3.06
4406 7029 1.135960 TGACTGGTGGACCAATGACA 58.864 50.000 0.00 0.00 46.97 3.58
4407 7030 1.072173 TGACTGGTGGACCAATGACAG 59.928 52.381 0.00 5.50 46.97 3.51
4408 7031 1.072331 GACTGGTGGACCAATGACAGT 59.928 52.381 17.35 17.35 46.97 3.55
4409 7032 2.301870 GACTGGTGGACCAATGACAGTA 59.698 50.000 17.35 0.00 46.97 2.74
4410 7033 2.708861 ACTGGTGGACCAATGACAGTAA 59.291 45.455 16.36 0.00 46.97 2.24
4411 7034 3.074412 CTGGTGGACCAATGACAGTAAC 58.926 50.000 0.00 0.00 46.97 2.50
4412 7035 2.224670 TGGTGGACCAATGACAGTAACC 60.225 50.000 0.00 0.00 44.35 2.85
4413 7036 2.073816 GTGGACCAATGACAGTAACCG 58.926 52.381 0.00 0.00 0.00 4.44
4414 7037 1.972075 TGGACCAATGACAGTAACCGA 59.028 47.619 0.00 0.00 0.00 4.69
4415 7038 2.569853 TGGACCAATGACAGTAACCGAT 59.430 45.455 0.00 0.00 0.00 4.18
4416 7039 2.936498 GGACCAATGACAGTAACCGATG 59.064 50.000 0.00 0.00 0.00 3.84
4417 7040 3.369052 GGACCAATGACAGTAACCGATGA 60.369 47.826 0.00 0.00 0.00 2.92
4418 7041 3.596214 ACCAATGACAGTAACCGATGAC 58.404 45.455 0.00 0.00 0.00 3.06
4419 7042 3.007506 ACCAATGACAGTAACCGATGACA 59.992 43.478 0.00 0.00 0.00 3.58
4420 7043 3.618594 CCAATGACAGTAACCGATGACAG 59.381 47.826 0.00 0.00 0.00 3.51
4421 7044 4.494484 CAATGACAGTAACCGATGACAGA 58.506 43.478 0.00 0.00 0.00 3.41
4422 7045 5.111989 CAATGACAGTAACCGATGACAGAT 58.888 41.667 0.00 0.00 0.00 2.90
4423 7046 4.801330 TGACAGTAACCGATGACAGATT 57.199 40.909 0.00 0.00 0.00 2.40
4424 7047 4.494484 TGACAGTAACCGATGACAGATTG 58.506 43.478 0.00 0.00 0.00 2.67
4425 7048 4.219725 TGACAGTAACCGATGACAGATTGA 59.780 41.667 0.00 0.00 0.00 2.57
4426 7049 4.495422 ACAGTAACCGATGACAGATTGAC 58.505 43.478 0.00 0.00 0.00 3.18
4427 7050 3.865745 CAGTAACCGATGACAGATTGACC 59.134 47.826 0.00 0.00 0.00 4.02
4428 7051 2.010145 AACCGATGACAGATTGACCG 57.990 50.000 0.00 0.00 0.00 4.79
4429 7052 0.175760 ACCGATGACAGATTGACCGG 59.824 55.000 0.00 0.00 41.04 5.28
4430 7053 0.175760 CCGATGACAGATTGACCGGT 59.824 55.000 6.92 6.92 0.00 5.28
4431 7054 1.560923 CGATGACAGATTGACCGGTC 58.439 55.000 28.17 28.17 0.00 4.79
4432 7055 1.135112 CGATGACAGATTGACCGGTCA 60.135 52.381 33.23 33.23 43.61 4.02
4439 7062 4.889807 TTGACCGGTCAACCCTTG 57.110 55.556 39.59 0.00 43.90 3.61
4440 7063 2.222885 TTGACCGGTCAACCCTTGA 58.777 52.632 39.59 21.05 43.90 3.02
4441 7064 0.547075 TTGACCGGTCAACCCTTGAA 59.453 50.000 39.59 20.31 43.90 2.69
4442 7065 0.179040 TGACCGGTCAACCCTTGAAC 60.179 55.000 34.60 4.54 43.92 3.18
4447 7070 2.341846 GGTCAACCCTTGAACACAGA 57.658 50.000 0.00 0.00 46.57 3.41
4448 7071 2.222027 GGTCAACCCTTGAACACAGAG 58.778 52.381 0.00 0.00 46.57 3.35
4449 7072 2.158813 GGTCAACCCTTGAACACAGAGA 60.159 50.000 0.00 0.00 46.57 3.10
4450 7073 3.541632 GTCAACCCTTGAACACAGAGAA 58.458 45.455 0.00 0.00 42.15 2.87
4451 7074 4.137543 GTCAACCCTTGAACACAGAGAAT 58.862 43.478 0.00 0.00 42.15 2.40
4452 7075 4.580580 GTCAACCCTTGAACACAGAGAATT 59.419 41.667 0.00 0.00 42.15 2.17
4453 7076 4.580167 TCAACCCTTGAACACAGAGAATTG 59.420 41.667 0.00 0.00 36.59 2.32
4454 7077 3.490348 ACCCTTGAACACAGAGAATTGG 58.510 45.455 0.00 0.00 0.00 3.16
4455 7078 3.117512 ACCCTTGAACACAGAGAATTGGT 60.118 43.478 0.00 0.00 0.00 3.67
4456 7079 3.503748 CCCTTGAACACAGAGAATTGGTC 59.496 47.826 0.00 0.00 0.00 4.02
4457 7080 3.187227 CCTTGAACACAGAGAATTGGTCG 59.813 47.826 0.00 0.00 31.57 4.79
4458 7081 3.469008 TGAACACAGAGAATTGGTCGT 57.531 42.857 0.00 0.00 31.57 4.34
4459 7082 3.804036 TGAACACAGAGAATTGGTCGTT 58.196 40.909 0.00 0.00 31.57 3.85
4460 7083 3.559655 TGAACACAGAGAATTGGTCGTTG 59.440 43.478 0.00 0.00 31.57 4.10
4461 7084 3.469008 ACACAGAGAATTGGTCGTTGA 57.531 42.857 0.00 0.00 0.00 3.18
4462 7085 3.131396 ACACAGAGAATTGGTCGTTGAC 58.869 45.455 0.00 0.00 0.00 3.18
4463 7086 3.181465 ACACAGAGAATTGGTCGTTGACT 60.181 43.478 0.00 0.00 32.47 3.41
4464 7087 3.809832 CACAGAGAATTGGTCGTTGACTT 59.190 43.478 0.00 0.00 32.47 3.01
4465 7088 4.273480 CACAGAGAATTGGTCGTTGACTTT 59.727 41.667 0.00 0.00 32.47 2.66
4466 7089 4.881850 ACAGAGAATTGGTCGTTGACTTTT 59.118 37.500 0.00 0.00 32.47 2.27
4467 7090 5.007724 ACAGAGAATTGGTCGTTGACTTTTC 59.992 40.000 0.00 0.00 32.47 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 133 9.736023 GATTGTCTTCAAGTTGTTCAAACTATT 57.264 29.630 2.11 0.00 36.97 1.73
135 136 7.094205 ACTGATTGTCTTCAAGTTGTTCAAACT 60.094 33.333 2.11 0.00 36.97 2.66
170 171 5.680619 ACAACCACTGTATGAACTCTTTCA 58.319 37.500 0.00 0.00 45.93 2.69
185 186 2.575532 CACCACTGAATGACAACCACT 58.424 47.619 0.00 0.00 0.00 4.00
186 187 1.001378 GCACCACTGAATGACAACCAC 60.001 52.381 0.00 0.00 0.00 4.16
187 188 1.133823 AGCACCACTGAATGACAACCA 60.134 47.619 0.00 0.00 0.00 3.67
188 189 1.537202 GAGCACCACTGAATGACAACC 59.463 52.381 0.00 0.00 0.00 3.77
189 190 2.498167 AGAGCACCACTGAATGACAAC 58.502 47.619 0.00 0.00 0.00 3.32
217 2553 2.345991 CGGAAACTCAAGGCCCGA 59.654 61.111 0.00 0.00 42.49 5.14
222 2558 0.323629 TGTAGCCCGGAAACTCAAGG 59.676 55.000 0.73 0.00 0.00 3.61
244 2580 3.053842 ACGAAGTATGACCAGACCTAGGA 60.054 47.826 17.98 0.00 41.94 2.94
264 2600 1.668751 ACCGCATTGCCAAGTATAACG 59.331 47.619 2.41 0.00 0.00 3.18
268 2604 1.544724 AACACCGCATTGCCAAGTAT 58.455 45.000 2.41 0.00 0.00 2.12
282 2618 1.395954 GGAAATCGGCGTCTAAACACC 59.604 52.381 6.85 0.00 0.00 4.16
293 2629 1.402852 GGCTTCAACAAGGAAATCGGC 60.403 52.381 0.00 0.00 0.00 5.54
294 2630 2.162681 AGGCTTCAACAAGGAAATCGG 58.837 47.619 0.00 0.00 0.00 4.18
345 2681 6.755607 CACGAAAGGTTAGATACTTAGAACCC 59.244 42.308 0.00 0.00 41.97 4.11
386 2734 5.975939 AGAAAAACGACATACCTACGCTATC 59.024 40.000 0.00 0.00 0.00 2.08
397 2745 5.529430 TGCTTCCAAGAAGAAAAACGACATA 59.471 36.000 8.50 0.00 0.00 2.29
408 2756 6.219417 TCAAAAACAATGCTTCCAAGAAGA 57.781 33.333 8.50 0.00 0.00 2.87
540 2888 5.220228 CGAAATTACGACTAGGTGCAGAAAG 60.220 44.000 0.00 0.00 35.09 2.62
546 2894 2.884827 ACCGAAATTACGACTAGGTGC 58.115 47.619 0.00 0.00 35.09 5.01
548 2896 5.299949 ACAAAACCGAAATTACGACTAGGT 58.700 37.500 0.00 0.00 35.09 3.08
571 2919 5.935206 TCACATCGGCAACTAATAAGTCAAA 59.065 36.000 0.00 0.00 33.75 2.69
579 2927 4.458989 ACACAAATCACATCGGCAACTAAT 59.541 37.500 0.00 0.00 0.00 1.73
580 2928 3.818210 ACACAAATCACATCGGCAACTAA 59.182 39.130 0.00 0.00 0.00 2.24
609 2958 4.724399 TCATAGTTCCAACACCAACACAT 58.276 39.130 0.00 0.00 0.00 3.21
610 2959 4.133820 CTCATAGTTCCAACACCAACACA 58.866 43.478 0.00 0.00 0.00 3.72
619 2968 4.125703 CCAGATCTGCTCATAGTTCCAAC 58.874 47.826 17.76 0.00 0.00 3.77
620 2969 3.776969 ACCAGATCTGCTCATAGTTCCAA 59.223 43.478 17.76 0.00 0.00 3.53
623 2972 4.118410 CACACCAGATCTGCTCATAGTTC 58.882 47.826 17.76 0.00 0.00 3.01
624 2973 3.517100 ACACACCAGATCTGCTCATAGTT 59.483 43.478 17.76 0.00 0.00 2.24
625 2974 3.102972 ACACACCAGATCTGCTCATAGT 58.897 45.455 17.76 5.73 0.00 2.12
626 2975 3.455327 CACACACCAGATCTGCTCATAG 58.545 50.000 17.76 5.06 0.00 2.23
628 2977 1.678123 GCACACACCAGATCTGCTCAT 60.678 52.381 17.76 0.00 0.00 2.90
629 2978 0.321034 GCACACACCAGATCTGCTCA 60.321 55.000 17.76 0.00 0.00 4.26
630 2979 0.036577 AGCACACACCAGATCTGCTC 60.037 55.000 17.76 0.82 32.68 4.26
632 2981 1.357258 CGAGCACACACCAGATCTGC 61.357 60.000 17.76 4.93 0.00 4.26
642 2998 1.160989 ACAAACACAACGAGCACACA 58.839 45.000 0.00 0.00 0.00 3.72
853 3214 6.257849 TGTGCTTGTTGTTATATAGCAGTAGC 59.742 38.462 15.97 15.97 41.98 3.58
854 3215 7.517417 GCTGTGCTTGTTGTTATATAGCAGTAG 60.517 40.741 0.00 0.00 41.98 2.57
855 3216 6.257849 GCTGTGCTTGTTGTTATATAGCAGTA 59.742 38.462 0.00 0.00 41.98 2.74
856 3217 5.065218 GCTGTGCTTGTTGTTATATAGCAGT 59.935 40.000 0.00 0.00 41.98 4.40
883 3249 4.342092 TGAGCAATCGATGAGTAGAATGGA 59.658 41.667 0.00 0.00 0.00 3.41
900 3266 3.076621 CAAAGTGTAGGATGCTGAGCAA 58.923 45.455 12.69 0.00 43.62 3.91
901 3267 2.302733 TCAAAGTGTAGGATGCTGAGCA 59.697 45.455 10.59 10.59 44.86 4.26
902 3268 2.977914 TCAAAGTGTAGGATGCTGAGC 58.022 47.619 0.00 0.00 0.00 4.26
924 3290 3.118075 TGGACACACTTGAACTTGATGGA 60.118 43.478 0.00 0.00 0.00 3.41
1108 3587 4.680237 CAGTGCCCTGGCGACGAA 62.680 66.667 0.00 0.00 45.51 3.85
1367 3882 0.666274 GATGAACGCCGTCTGTGTGA 60.666 55.000 0.00 0.00 37.86 3.58
1751 4269 5.221541 GGGAGTATAGAGTAGCTGCATGTTT 60.222 44.000 4.12 0.00 0.00 2.83
1775 4293 6.722328 AGAAAGACAAGTATTTAGGAAGGGG 58.278 40.000 0.00 0.00 0.00 4.79
1776 4294 9.734984 TTTAGAAAGACAAGTATTTAGGAAGGG 57.265 33.333 0.00 0.00 0.00 3.95
1801 4319 8.932791 CCGTATGTAGTCACTTGTTAAAATCTT 58.067 33.333 0.00 0.00 0.00 2.40
1802 4320 8.308931 TCCGTATGTAGTCACTTGTTAAAATCT 58.691 33.333 0.00 0.00 0.00 2.40
1803 4321 8.470040 TCCGTATGTAGTCACTTGTTAAAATC 57.530 34.615 0.00 0.00 0.00 2.17
1804 4322 8.715088 GTTCCGTATGTAGTCACTTGTTAAAAT 58.285 33.333 0.00 0.00 0.00 1.82
1805 4323 7.710044 TGTTCCGTATGTAGTCACTTGTTAAAA 59.290 33.333 0.00 0.00 0.00 1.52
1806 4324 7.208777 TGTTCCGTATGTAGTCACTTGTTAAA 58.791 34.615 0.00 0.00 0.00 1.52
1807 4325 6.747125 TGTTCCGTATGTAGTCACTTGTTAA 58.253 36.000 0.00 0.00 0.00 2.01
1808 4326 6.330004 TGTTCCGTATGTAGTCACTTGTTA 57.670 37.500 0.00 0.00 0.00 2.41
1809 4327 5.204409 TGTTCCGTATGTAGTCACTTGTT 57.796 39.130 0.00 0.00 0.00 2.83
1810 4328 4.859304 TGTTCCGTATGTAGTCACTTGT 57.141 40.909 0.00 0.00 0.00 3.16
1811 4329 6.533819 TTTTGTTCCGTATGTAGTCACTTG 57.466 37.500 0.00 0.00 0.00 3.16
1812 4330 6.932400 TCATTTTGTTCCGTATGTAGTCACTT 59.068 34.615 0.00 0.00 0.00 3.16
1813 4331 6.460781 TCATTTTGTTCCGTATGTAGTCACT 58.539 36.000 0.00 0.00 0.00 3.41
1814 4332 6.367969 ACTCATTTTGTTCCGTATGTAGTCAC 59.632 38.462 0.00 0.00 0.00 3.67
1815 4333 6.367695 CACTCATTTTGTTCCGTATGTAGTCA 59.632 38.462 0.00 0.00 0.00 3.41
1816 4334 6.588756 TCACTCATTTTGTTCCGTATGTAGTC 59.411 38.462 0.00 0.00 0.00 2.59
1817 4335 6.460781 TCACTCATTTTGTTCCGTATGTAGT 58.539 36.000 0.00 0.00 0.00 2.73
1818 4336 6.961359 TCACTCATTTTGTTCCGTATGTAG 57.039 37.500 0.00 0.00 0.00 2.74
1819 4337 7.822334 AGATTCACTCATTTTGTTCCGTATGTA 59.178 33.333 0.00 0.00 0.00 2.29
1820 4338 6.655003 AGATTCACTCATTTTGTTCCGTATGT 59.345 34.615 0.00 0.00 0.00 2.29
1821 4339 7.076842 AGATTCACTCATTTTGTTCCGTATG 57.923 36.000 0.00 0.00 0.00 2.39
1822 4340 7.822334 TGTAGATTCACTCATTTTGTTCCGTAT 59.178 33.333 0.00 0.00 0.00 3.06
1823 4341 7.117236 GTGTAGATTCACTCATTTTGTTCCGTA 59.883 37.037 0.00 0.00 35.68 4.02
1824 4342 5.995282 TGTAGATTCACTCATTTTGTTCCGT 59.005 36.000 0.00 0.00 0.00 4.69
1825 4343 6.147821 AGTGTAGATTCACTCATTTTGTTCCG 59.852 38.462 0.00 0.00 44.07 4.30
1826 4344 7.440523 AGTGTAGATTCACTCATTTTGTTCC 57.559 36.000 0.00 0.00 44.07 3.62
1858 4376 9.682465 ACTACACATACGGATGTATATAGACAT 57.318 33.333 23.13 12.70 44.82 3.06
1859 4377 9.159364 GACTACACATACGGATGTATATAGACA 57.841 37.037 23.13 2.07 44.82 3.41
1860 4378 8.610896 GGACTACACATACGGATGTATATAGAC 58.389 40.741 23.13 18.69 44.82 2.59
1861 4379 8.323567 TGGACTACACATACGGATGTATATAGA 58.676 37.037 23.13 7.05 44.82 1.98
1862 4380 8.502105 TGGACTACACATACGGATGTATATAG 57.498 38.462 14.23 16.68 44.82 1.31
1863 4381 9.470399 AATGGACTACACATACGGATGTATATA 57.530 33.333 14.23 5.72 44.82 0.86
1864 4382 7.956328 ATGGACTACACATACGGATGTATAT 57.044 36.000 14.23 4.75 44.82 0.86
1865 4383 7.770366 AATGGACTACACATACGGATGTATA 57.230 36.000 14.23 5.63 44.82 1.47
1866 4384 6.665992 AATGGACTACACATACGGATGTAT 57.334 37.500 14.23 4.42 44.82 2.29
1867 4385 6.097129 TCAAATGGACTACACATACGGATGTA 59.903 38.462 14.23 0.00 44.82 2.29
1869 4387 5.356426 TCAAATGGACTACACATACGGATG 58.644 41.667 5.94 5.94 39.16 3.51
1870 4388 5.607939 TCAAATGGACTACACATACGGAT 57.392 39.130 0.00 0.00 0.00 4.18
1871 4389 5.408880 TTCAAATGGACTACACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
1872 4390 6.538742 AGATTTCAAATGGACTACACATACGG 59.461 38.462 0.00 0.00 0.00 4.02
1873 4391 7.492669 AGAGATTTCAAATGGACTACACATACG 59.507 37.037 0.00 0.00 0.00 3.06
1874 4392 8.723942 AGAGATTTCAAATGGACTACACATAC 57.276 34.615 0.00 0.00 0.00 2.39
1876 4394 8.762645 TCTAGAGATTTCAAATGGACTACACAT 58.237 33.333 0.00 0.00 0.00 3.21
1877 4395 8.134202 TCTAGAGATTTCAAATGGACTACACA 57.866 34.615 0.00 0.00 0.00 3.72
1878 4396 9.436957 TTTCTAGAGATTTCAAATGGACTACAC 57.563 33.333 0.00 0.00 0.00 2.90
1879 4397 9.658799 CTTTCTAGAGATTTCAAATGGACTACA 57.341 33.333 0.00 0.00 0.00 2.74
1880 4398 9.877178 TCTTTCTAGAGATTTCAAATGGACTAC 57.123 33.333 0.00 0.00 0.00 2.73
1881 4399 9.877178 GTCTTTCTAGAGATTTCAAATGGACTA 57.123 33.333 0.00 0.00 0.00 2.59
1882 4400 8.378565 TGTCTTTCTAGAGATTTCAAATGGACT 58.621 33.333 0.00 0.00 0.00 3.85
1883 4401 8.553459 TGTCTTTCTAGAGATTTCAAATGGAC 57.447 34.615 0.00 0.00 0.00 4.02
1884 4402 9.573166 TTTGTCTTTCTAGAGATTTCAAATGGA 57.427 29.630 0.00 0.00 0.00 3.41
1900 4418 8.947115 CCTCCGTTTCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
1901 4419 8.182227 CCCTCCGTTTCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
1902 4420 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
1903 4421 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
1904 4422 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
1905 4423 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
1906 4424 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
1907 4425 8.904099 ATACTCCCTCCGTTTCTAAATATTTG 57.096 34.615 11.05 1.65 0.00 2.32
1908 4426 9.916360 AAATACTCCCTCCGTTTCTAAATATTT 57.084 29.630 5.89 5.89 0.00 1.40
1909 4427 9.916360 AAAATACTCCCTCCGTTTCTAAATATT 57.084 29.630 0.00 0.00 0.00 1.28
1910 4428 9.916360 AAAAATACTCCCTCCGTTTCTAAATAT 57.084 29.630 0.00 0.00 0.00 1.28
1951 4469 6.659824 TGACCTGAAAACTATATTCCTTCCC 58.340 40.000 0.00 0.00 0.00 3.97
2014 4533 7.342769 TGAAGAGCGAATTAGTAACTCCATA 57.657 36.000 0.00 0.00 0.00 2.74
2020 4539 7.988904 AGTACATGAAGAGCGAATTAGTAAC 57.011 36.000 0.00 0.00 0.00 2.50
2077 4596 6.419484 TCATTCCTAAGAACACTTGTCTCA 57.581 37.500 0.00 0.00 33.97 3.27
2143 4662 1.490490 AGTGGGAGCAAGACTGTTTCA 59.510 47.619 0.00 0.00 0.00 2.69
2190 4709 6.293790 GGGTTTACTCACCATTTTATATCGGC 60.294 42.308 0.00 0.00 38.79 5.54
2193 4712 9.628500 AAGAGGGTTTACTCACCATTTTATATC 57.372 33.333 0.00 0.00 39.97 1.63
2204 4723 2.552743 GGTTGCAAGAGGGTTTACTCAC 59.447 50.000 0.00 0.00 39.97 3.51
2213 4732 1.672356 CGACCTGGTTGCAAGAGGG 60.672 63.158 22.71 16.25 0.00 4.30
2247 4766 1.836999 TTGTGCCACTAGCCCGATGT 61.837 55.000 0.00 0.00 42.71 3.06
2250 4770 2.167398 GACTTGTGCCACTAGCCCGA 62.167 60.000 6.20 0.00 42.71 5.14
2288 4808 4.080526 GGTGGCCTCTCCTACTTTTTCATA 60.081 45.833 3.32 0.00 35.26 2.15
2292 4812 1.354705 GGGTGGCCTCTCCTACTTTTT 59.645 52.381 3.32 0.00 35.26 1.94
2316 4836 3.724374 TGTACTCTTGGTTGTAGTGTGC 58.276 45.455 0.00 0.00 0.00 4.57
2408 4938 2.081462 CGTTTGTGCCTTTACCTAGGG 58.919 52.381 14.81 0.00 35.74 3.53
2414 4944 3.423996 TTTGGTCGTTTGTGCCTTTAC 57.576 42.857 0.00 0.00 0.00 2.01
2489 5020 1.402787 CCACTCACTTGGTGCCTTTT 58.597 50.000 0.00 0.00 32.98 2.27
2499 5030 0.394216 TGCACTTGTGCCACTCACTT 60.394 50.000 21.01 0.00 45.81 3.16
2520 5051 2.106187 TGTAGTGTGTTAGGGGTGGT 57.894 50.000 0.00 0.00 0.00 4.16
2533 5064 5.541845 TCTTCAGTGGTCTTGATTGTAGTG 58.458 41.667 0.00 0.00 0.00 2.74
2538 5069 4.277515 TCCTCTTCAGTGGTCTTGATTG 57.722 45.455 0.00 0.00 0.00 2.67
2544 5075 1.006043 TCCGATCCTCTTCAGTGGTCT 59.994 52.381 0.00 0.00 0.00 3.85
2548 5079 0.103937 GGCTCCGATCCTCTTCAGTG 59.896 60.000 0.00 0.00 0.00 3.66
2587 5118 3.455469 CTCGGGGTCGGGGTACAC 61.455 72.222 0.00 0.00 36.95 2.90
2594 5125 2.635787 TATGAGGTCCTCGGGGTCGG 62.636 65.000 14.34 0.00 36.95 4.79
2595 5126 0.539901 ATATGAGGTCCTCGGGGTCG 60.540 60.000 14.34 0.00 32.35 4.79
2596 5127 0.969894 CATATGAGGTCCTCGGGGTC 59.030 60.000 14.34 0.00 32.35 4.46
2615 5146 6.775594 AAAATCTCCAAGGTGTTATTAGGC 57.224 37.500 0.00 0.00 0.00 3.93
2637 5168 9.973661 TCCCTTGACTTATCTCAATGATAAAAA 57.026 29.630 0.00 0.00 44.30 1.94
2651 5182 6.095440 CCGTTTGATGATTTCCCTTGACTTAT 59.905 38.462 0.00 0.00 0.00 1.73
2662 5193 9.026074 TGTTTTACTTTTCCGTTTGATGATTTC 57.974 29.630 0.00 0.00 0.00 2.17
2745 5277 1.064906 ACCCATCACTTCATCAGCCTG 60.065 52.381 0.00 0.00 0.00 4.85
3034 5616 7.495135 AATTGTTACCATTTCCTGCAAAAAG 57.505 32.000 0.00 0.00 0.00 2.27
3296 5881 3.990959 TGTGCAACCTGTATACATCCA 57.009 42.857 5.91 0.00 34.36 3.41
3302 5895 2.310349 ACCCCATTGTGCAACCTGTATA 59.690 45.455 0.00 0.00 34.36 1.47
3362 5955 2.108075 TGGAGAATCAGCTTCACCCAAA 59.892 45.455 0.00 0.00 42.23 3.28
3383 5976 6.262056 TCCAACCTCTTTAAACCTTCTCTT 57.738 37.500 0.00 0.00 0.00 2.85
3451 6044 0.178068 GCTCTAACTCGCCCCAATGA 59.822 55.000 0.00 0.00 0.00 2.57
3474 6067 2.354729 CATTGGAGAACCGGGGCA 59.645 61.111 6.32 0.00 39.42 5.36
3528 6121 1.809271 CGGAGCTAGATTGCACTGCAT 60.809 52.381 4.10 0.00 38.76 3.96
3579 6173 0.539051 CCAGTGATGGACCCAGAGAC 59.461 60.000 0.00 0.00 0.00 3.36
3627 6221 8.616076 ACGCGTATTATTAGTTGTAGTCTTAGT 58.384 33.333 11.67 0.00 0.00 2.24
3678 6272 1.642112 TCATTTGCCAATCTTGCCCA 58.358 45.000 0.00 0.00 0.00 5.36
3696 6290 6.765512 AGACCTAAGTTACTACCACGACTATC 59.234 42.308 0.00 0.00 0.00 2.08
3702 6296 9.727627 CTAATTTAGACCTAAGTTACTACCACG 57.272 37.037 0.00 0.00 0.00 4.94
3734 6356 2.365617 AGGAGGAGCATATGTACAACCG 59.634 50.000 0.00 0.00 0.00 4.44
3795 6417 7.148188 GGTAAAACCCCACTGTAAGTAATAAGC 60.148 40.741 0.00 0.00 37.41 3.09
3796 6418 8.272545 GGTAAAACCCCACTGTAAGTAATAAG 57.727 38.462 0.00 0.00 37.41 1.73
3813 6435 8.822855 CACAAATTTTTGAAGTAGGGTAAAACC 58.177 33.333 9.88 0.00 40.55 3.27
3814 6436 8.332464 GCACAAATTTTTGAAGTAGGGTAAAAC 58.668 33.333 8.51 0.00 40.55 2.43
3815 6437 8.261522 AGCACAAATTTTTGAAGTAGGGTAAAA 58.738 29.630 8.51 0.00 40.55 1.52
3816 6438 7.787028 AGCACAAATTTTTGAAGTAGGGTAAA 58.213 30.769 8.51 0.00 40.55 2.01
3817 6439 7.354751 AGCACAAATTTTTGAAGTAGGGTAA 57.645 32.000 8.51 0.00 40.55 2.85
3818 6440 6.969993 AGCACAAATTTTTGAAGTAGGGTA 57.030 33.333 8.51 0.00 40.55 3.69
3819 6441 5.869649 AGCACAAATTTTTGAAGTAGGGT 57.130 34.783 8.51 0.00 40.55 4.34
3820 6442 8.831715 AATAAGCACAAATTTTTGAAGTAGGG 57.168 30.769 8.51 0.00 40.55 3.53
3824 6446 9.777297 ATGGTAATAAGCACAAATTTTTGAAGT 57.223 25.926 8.51 0.00 41.23 3.01
3826 6448 8.920665 CGATGGTAATAAGCACAAATTTTTGAA 58.079 29.630 8.51 0.00 41.23 2.69
3827 6449 7.543868 CCGATGGTAATAAGCACAAATTTTTGA 59.456 33.333 8.51 0.00 41.23 2.69
3828 6450 7.201513 CCCGATGGTAATAAGCACAAATTTTTG 60.202 37.037 0.00 0.00 43.62 2.44
3829 6451 6.816140 CCCGATGGTAATAAGCACAAATTTTT 59.184 34.615 0.00 0.00 35.57 1.94
3830 6452 6.153680 TCCCGATGGTAATAAGCACAAATTTT 59.846 34.615 0.00 0.00 35.57 1.82
3831 6453 5.654650 TCCCGATGGTAATAAGCACAAATTT 59.345 36.000 0.00 0.00 35.57 1.82
3832 6454 5.197451 TCCCGATGGTAATAAGCACAAATT 58.803 37.500 0.00 0.00 35.57 1.82
3833 6455 4.787551 TCCCGATGGTAATAAGCACAAAT 58.212 39.130 0.00 0.00 35.57 2.32
3834 6456 4.196193 CTCCCGATGGTAATAAGCACAAA 58.804 43.478 0.00 0.00 35.57 2.83
3835 6457 3.199071 ACTCCCGATGGTAATAAGCACAA 59.801 43.478 0.00 0.00 35.57 3.33
3836 6458 2.769663 ACTCCCGATGGTAATAAGCACA 59.230 45.455 0.00 0.00 35.57 4.57
3837 6459 3.470645 ACTCCCGATGGTAATAAGCAC 57.529 47.619 0.00 0.00 35.57 4.40
3838 6460 5.818678 AATACTCCCGATGGTAATAAGCA 57.181 39.130 0.00 0.00 37.55 3.91
3839 6461 7.494952 GGATAAATACTCCCGATGGTAATAAGC 59.505 40.741 0.00 0.00 0.00 3.09
3840 6462 8.537016 TGGATAAATACTCCCGATGGTAATAAG 58.463 37.037 0.00 0.00 31.32 1.73
3853 6475 7.822822 ACCGCATATAAAGTGGATAAATACTCC 59.177 37.037 13.32 0.00 39.89 3.85
3865 6487 9.659830 GTCCTTATTTTTACCGCATATAAAGTG 57.340 33.333 0.00 0.00 0.00 3.16
3900 6522 1.078709 GCTAAGTTCGCATGTGCTCA 58.921 50.000 0.00 0.00 39.32 4.26
3908 6530 1.736645 GAGCCACGCTAAGTTCGCA 60.737 57.895 0.00 0.00 39.88 5.10
3931 6553 5.596361 TGGTTCCATCAAAAGAAACTTAGCA 59.404 36.000 0.00 0.00 30.78 3.49
3933 6555 7.141363 CACTGGTTCCATCAAAAGAAACTTAG 58.859 38.462 0.00 0.00 30.78 2.18
3944 6566 0.888736 CGGTGCACTGGTTCCATCAA 60.889 55.000 18.43 0.00 0.00 2.57
3954 6576 1.540363 GGACATATACCCGGTGCACTG 60.540 57.143 19.25 19.25 0.00 3.66
3958 6580 2.522185 TCTAGGACATATACCCGGTGC 58.478 52.381 0.00 0.00 0.00 5.01
3967 6589 4.413520 ACCAGTGCCAAATCTAGGACATAT 59.586 41.667 0.00 0.00 0.00 1.78
3971 6593 2.633488 GACCAGTGCCAAATCTAGGAC 58.367 52.381 0.00 0.00 0.00 3.85
3974 6596 2.739932 CGAGGACCAGTGCCAAATCTAG 60.740 54.545 0.00 0.00 0.00 2.43
3986 6608 2.426522 TCAGAAAAATGCGAGGACCAG 58.573 47.619 0.00 0.00 0.00 4.00
4018 6640 5.626543 CACTGAATGAACATTGTCGAAAAGG 59.373 40.000 4.72 0.00 0.00 3.11
4035 6657 2.573915 GGGACTTCTCCTTCCACTGAAT 59.426 50.000 0.00 0.00 36.68 2.57
4040 6662 0.246910 GACGGGACTTCTCCTTCCAC 59.753 60.000 0.00 0.00 36.68 4.02
4044 6666 2.265096 GTCGACGGGACTTCTCCTT 58.735 57.895 0.00 0.00 42.62 3.36
4055 6677 2.442188 GGCGCTTTGTAGTCGACGG 61.442 63.158 10.46 0.00 0.00 4.79
4078 6700 9.784531 ATCATATTTTGAGATTGACGGAGTTAT 57.215 29.630 0.00 0.00 38.53 1.89
4080 6702 7.467811 GCATCATATTTTGAGATTGACGGAGTT 60.468 37.037 0.00 0.00 38.53 3.01
4084 6706 5.008911 TGGCATCATATTTTGAGATTGACGG 59.991 40.000 0.00 0.00 37.89 4.79
4094 6716 7.827701 AGATAATGAGCTGGCATCATATTTTG 58.172 34.615 4.13 0.00 36.38 2.44
4102 6724 4.215827 CCTTTGAGATAATGAGCTGGCATC 59.784 45.833 0.00 0.00 0.00 3.91
4108 6730 4.500499 AGCACCTTTGAGATAATGAGCT 57.500 40.909 0.00 0.00 0.00 4.09
4109 6731 6.874288 ATAAGCACCTTTGAGATAATGAGC 57.126 37.500 0.00 0.00 0.00 4.26
4146 6768 9.000486 CACTCATCTCTATGAATGCACATATTT 58.000 33.333 0.00 0.00 41.57 1.40
4148 6770 7.677892 ACACTCATCTCTATGAATGCACATAT 58.322 34.615 0.00 0.00 41.91 1.78
4150 6772 5.926663 ACACTCATCTCTATGAATGCACAT 58.073 37.500 0.00 0.00 41.91 3.21
4153 6775 7.059202 ACATACACTCATCTCTATGAATGCA 57.941 36.000 0.00 0.00 41.91 3.96
4192 6814 6.899393 AACACAGTACAATCATGGATGTTT 57.101 33.333 9.14 0.00 0.00 2.83
4193 6815 7.994425 TTAACACAGTACAATCATGGATGTT 57.006 32.000 9.14 0.00 0.00 2.71
4198 6820 9.180678 GTTTCTTTTAACACAGTACAATCATGG 57.819 33.333 0.00 0.00 0.00 3.66
4199 6821 9.729023 TGTTTCTTTTAACACAGTACAATCATG 57.271 29.630 0.00 0.00 33.31 3.07
4206 6828 5.170803 GCGCTTGTTTCTTTTAACACAGTAC 59.829 40.000 0.00 0.00 37.72 2.73
4211 6833 3.854809 TGTGCGCTTGTTTCTTTTAACAC 59.145 39.130 9.73 0.00 37.72 3.32
4219 6841 2.916111 CGTTAATGTGCGCTTGTTTCT 58.084 42.857 9.73 0.00 0.00 2.52
4235 6857 0.878416 GTTGTTCCATGCTGGCGTTA 59.122 50.000 0.00 0.00 37.47 3.18
4284 6907 3.259625 GCTCTCTCACCTAGGTTCACTTT 59.740 47.826 13.15 0.00 0.00 2.66
4288 6911 2.621929 GGAGCTCTCTCACCTAGGTTCA 60.622 54.545 13.15 0.19 41.13 3.18
4292 6915 3.140325 CTAGGAGCTCTCTCACCTAGG 57.860 57.143 14.64 7.41 44.58 3.02
4299 6922 0.464735 TGACGCCTAGGAGCTCTCTC 60.465 60.000 14.75 2.82 38.62 3.20
4300 6923 0.465460 CTGACGCCTAGGAGCTCTCT 60.465 60.000 14.75 11.52 0.00 3.10
4301 6924 0.750182 ACTGACGCCTAGGAGCTCTC 60.750 60.000 14.75 3.63 0.00 3.20
4302 6925 0.323908 AACTGACGCCTAGGAGCTCT 60.324 55.000 14.75 2.18 0.00 4.09
4303 6926 0.179124 CAACTGACGCCTAGGAGCTC 60.179 60.000 14.75 4.71 0.00 4.09
4304 6927 0.612174 TCAACTGACGCCTAGGAGCT 60.612 55.000 14.75 0.00 0.00 4.09
4305 6928 0.179124 CTCAACTGACGCCTAGGAGC 60.179 60.000 14.75 6.48 0.00 4.70
4306 6929 0.179124 GCTCAACTGACGCCTAGGAG 60.179 60.000 14.75 12.99 0.00 3.69
4307 6930 0.612174 AGCTCAACTGACGCCTAGGA 60.612 55.000 14.75 0.00 0.00 2.94
4308 6931 1.103803 TAGCTCAACTGACGCCTAGG 58.896 55.000 3.67 3.67 0.00 3.02
4309 6932 2.164624 AGTTAGCTCAACTGACGCCTAG 59.835 50.000 0.00 0.00 46.01 3.02
4310 6933 2.168496 AGTTAGCTCAACTGACGCCTA 58.832 47.619 0.00 0.00 46.01 3.93
4311 6934 0.969894 AGTTAGCTCAACTGACGCCT 59.030 50.000 0.00 0.00 46.01 5.52
4312 6935 3.516578 AGTTAGCTCAACTGACGCC 57.483 52.632 0.00 0.00 46.01 5.68
4319 6942 4.285851 AGCGCCAGTTAGCTCAAC 57.714 55.556 2.29 0.00 39.98 3.18
4343 6966 1.141665 GCCGGCCCATAAGCTTTTG 59.858 57.895 18.11 7.17 0.00 2.44
4344 6967 2.058001 GGCCGGCCCATAAGCTTTT 61.058 57.895 36.64 0.00 0.00 2.27
4345 6968 2.442087 GGCCGGCCCATAAGCTTT 60.442 61.111 36.64 0.00 0.00 3.51
4346 6969 3.295386 TTGGCCGGCCCATAAGCTT 62.295 57.895 41.75 3.48 44.89 3.74
4347 6970 3.721370 CTTGGCCGGCCCATAAGCT 62.721 63.158 41.75 0.00 44.89 3.74
4348 6971 3.219198 CTTGGCCGGCCCATAAGC 61.219 66.667 41.75 16.63 44.89 3.09
4349 6972 3.219198 GCTTGGCCGGCCCATAAG 61.219 66.667 41.75 35.31 44.89 1.73
4350 6973 3.738481 AGCTTGGCCGGCCCATAA 61.738 61.111 41.75 27.97 44.89 1.90
4351 6974 4.504596 CAGCTTGGCCGGCCCATA 62.505 66.667 41.75 25.48 44.89 2.74
4357 6980 3.977244 AAAACGCAGCTTGGCCGG 61.977 61.111 0.00 0.00 0.00 6.13
4358 6981 2.730604 CAAAACGCAGCTTGGCCG 60.731 61.111 0.00 0.00 0.00 6.13
4359 6982 2.356194 CCAAAACGCAGCTTGGCC 60.356 61.111 0.00 0.00 37.07 5.36
4360 6983 0.031449 TAACCAAAACGCAGCTTGGC 59.969 50.000 11.05 0.00 44.72 4.52
4361 6984 2.500509 TTAACCAAAACGCAGCTTGG 57.499 45.000 9.81 9.81 45.85 3.61
4362 6985 4.047822 TGATTTAACCAAAACGCAGCTTG 58.952 39.130 0.00 0.00 0.00 4.01
4363 6986 4.202111 ACTGATTTAACCAAAACGCAGCTT 60.202 37.500 0.00 0.00 36.78 3.74
4364 6987 3.317993 ACTGATTTAACCAAAACGCAGCT 59.682 39.130 0.00 0.00 36.78 4.24
4365 6988 3.638484 ACTGATTTAACCAAAACGCAGC 58.362 40.909 0.00 0.00 36.78 5.25
4366 6989 5.173131 GTCAACTGATTTAACCAAAACGCAG 59.827 40.000 0.00 0.00 38.15 5.18
4367 6990 5.038033 GTCAACTGATTTAACCAAAACGCA 58.962 37.500 0.00 0.00 0.00 5.24
4368 6991 5.173131 CAGTCAACTGATTTAACCAAAACGC 59.827 40.000 4.05 0.00 46.59 4.84
4369 6992 5.685511 CCAGTCAACTGATTTAACCAAAACG 59.314 40.000 11.70 0.00 46.59 3.60
4370 6993 6.475402 CACCAGTCAACTGATTTAACCAAAAC 59.525 38.462 11.70 0.00 46.59 2.43
4371 6994 6.406400 CCACCAGTCAACTGATTTAACCAAAA 60.406 38.462 11.70 0.00 46.59 2.44
4372 6995 5.068460 CCACCAGTCAACTGATTTAACCAAA 59.932 40.000 11.70 0.00 46.59 3.28
4373 6996 4.582656 CCACCAGTCAACTGATTTAACCAA 59.417 41.667 11.70 0.00 46.59 3.67
4374 6997 4.141287 CCACCAGTCAACTGATTTAACCA 58.859 43.478 11.70 0.00 46.59 3.67
4375 6998 4.215613 GTCCACCAGTCAACTGATTTAACC 59.784 45.833 11.70 0.00 46.59 2.85
4376 6999 4.215613 GGTCCACCAGTCAACTGATTTAAC 59.784 45.833 11.70 3.63 46.59 2.01
4377 7000 4.141367 TGGTCCACCAGTCAACTGATTTAA 60.141 41.667 11.70 0.00 46.59 1.52
4378 7001 3.392947 TGGTCCACCAGTCAACTGATTTA 59.607 43.478 11.70 0.00 46.59 1.40
4379 7002 2.174639 TGGTCCACCAGTCAACTGATTT 59.825 45.455 11.70 0.00 46.59 2.17
4380 7003 1.774254 TGGTCCACCAGTCAACTGATT 59.226 47.619 11.70 0.00 46.59 2.57
4381 7004 1.434188 TGGTCCACCAGTCAACTGAT 58.566 50.000 11.70 0.00 46.59 2.90
4382 7005 2.923619 TGGTCCACCAGTCAACTGA 58.076 52.632 11.70 0.00 46.59 3.41
4391 7014 2.224670 GGTTACTGTCATTGGTCCACCA 60.225 50.000 0.00 0.00 45.94 4.17
4392 7015 2.433436 GGTTACTGTCATTGGTCCACC 58.567 52.381 0.00 0.00 0.00 4.61
4393 7016 2.073816 CGGTTACTGTCATTGGTCCAC 58.926 52.381 0.00 0.00 0.00 4.02
4394 7017 1.972075 TCGGTTACTGTCATTGGTCCA 59.028 47.619 0.00 0.00 0.00 4.02
4395 7018 2.754946 TCGGTTACTGTCATTGGTCC 57.245 50.000 0.00 0.00 0.00 4.46
4396 7019 3.617263 GTCATCGGTTACTGTCATTGGTC 59.383 47.826 0.00 0.00 0.00 4.02
4397 7020 3.007506 TGTCATCGGTTACTGTCATTGGT 59.992 43.478 0.00 0.00 0.00 3.67
4398 7021 3.595173 TGTCATCGGTTACTGTCATTGG 58.405 45.455 0.00 0.00 0.00 3.16
4399 7022 4.494484 TCTGTCATCGGTTACTGTCATTG 58.506 43.478 0.00 0.00 0.00 2.82
4400 7023 4.801330 TCTGTCATCGGTTACTGTCATT 57.199 40.909 0.00 0.00 0.00 2.57
4401 7024 5.105351 TCAATCTGTCATCGGTTACTGTCAT 60.105 40.000 0.00 0.00 0.00 3.06
4402 7025 4.219725 TCAATCTGTCATCGGTTACTGTCA 59.780 41.667 0.00 0.00 0.00 3.58
4403 7026 4.563184 GTCAATCTGTCATCGGTTACTGTC 59.437 45.833 0.00 0.00 0.00 3.51
4404 7027 4.495422 GTCAATCTGTCATCGGTTACTGT 58.505 43.478 0.00 0.00 0.00 3.55
4405 7028 3.865745 GGTCAATCTGTCATCGGTTACTG 59.134 47.826 0.00 0.00 0.00 2.74
4406 7029 3.428999 CGGTCAATCTGTCATCGGTTACT 60.429 47.826 0.00 0.00 0.00 2.24
4407 7030 2.858344 CGGTCAATCTGTCATCGGTTAC 59.142 50.000 0.00 0.00 0.00 2.50
4408 7031 2.159156 CCGGTCAATCTGTCATCGGTTA 60.159 50.000 0.00 0.00 0.00 2.85
4409 7032 1.405526 CCGGTCAATCTGTCATCGGTT 60.406 52.381 0.00 0.00 0.00 4.44
4410 7033 0.175760 CCGGTCAATCTGTCATCGGT 59.824 55.000 0.00 0.00 0.00 4.69
4411 7034 0.175760 ACCGGTCAATCTGTCATCGG 59.824 55.000 0.00 0.00 41.45 4.18
4412 7035 1.135112 TGACCGGTCAATCTGTCATCG 60.135 52.381 34.60 0.00 36.53 3.84
4413 7036 2.672961 TGACCGGTCAATCTGTCATC 57.327 50.000 34.60 4.54 36.53 2.92
4422 7045 0.547075 TTCAAGGGTTGACCGGTCAA 59.453 50.000 39.59 39.59 46.27 3.18
4423 7046 0.179040 GTTCAAGGGTTGACCGGTCA 60.179 55.000 33.23 33.23 46.96 4.02
4424 7047 0.179040 TGTTCAAGGGTTGACCGGTC 60.179 55.000 28.17 28.17 46.96 4.79
4425 7048 0.464916 GTGTTCAAGGGTTGACCGGT 60.465 55.000 6.92 6.92 46.96 5.28
4426 7049 0.464735 TGTGTTCAAGGGTTGACCGG 60.465 55.000 0.00 0.00 46.96 5.28
4427 7050 0.944386 CTGTGTTCAAGGGTTGACCG 59.056 55.000 0.00 0.00 46.96 4.79
4428 7051 2.158813 TCTCTGTGTTCAAGGGTTGACC 60.159 50.000 0.00 0.00 39.87 4.02
4429 7052 3.194005 TCTCTGTGTTCAAGGGTTGAC 57.806 47.619 0.00 0.00 39.87 3.18
4430 7053 3.924114 TTCTCTGTGTTCAAGGGTTGA 57.076 42.857 0.00 0.00 38.04 3.18
4431 7054 4.261741 CCAATTCTCTGTGTTCAAGGGTTG 60.262 45.833 0.00 0.00 0.00 3.77
4432 7055 3.891366 CCAATTCTCTGTGTTCAAGGGTT 59.109 43.478 0.00 0.00 0.00 4.11
4433 7056 3.117512 ACCAATTCTCTGTGTTCAAGGGT 60.118 43.478 0.00 0.00 0.00 4.34
4434 7057 3.490348 ACCAATTCTCTGTGTTCAAGGG 58.510 45.455 0.00 0.00 0.00 3.95
4435 7058 3.187227 CGACCAATTCTCTGTGTTCAAGG 59.813 47.826 0.00 0.00 0.00 3.61
4436 7059 3.809832 ACGACCAATTCTCTGTGTTCAAG 59.190 43.478 0.00 0.00 0.00 3.02
4437 7060 3.804036 ACGACCAATTCTCTGTGTTCAA 58.196 40.909 0.00 0.00 0.00 2.69
4438 7061 3.469008 ACGACCAATTCTCTGTGTTCA 57.531 42.857 0.00 0.00 0.00 3.18
4439 7062 3.807622 TCAACGACCAATTCTCTGTGTTC 59.192 43.478 0.00 0.00 0.00 3.18
4440 7063 3.560068 GTCAACGACCAATTCTCTGTGTT 59.440 43.478 0.00 0.00 0.00 3.32
4441 7064 3.131396 GTCAACGACCAATTCTCTGTGT 58.869 45.455 0.00 0.00 0.00 3.72
4442 7065 3.393800 AGTCAACGACCAATTCTCTGTG 58.606 45.455 0.00 0.00 32.18 3.66
4443 7066 3.753294 AGTCAACGACCAATTCTCTGT 57.247 42.857 0.00 0.00 32.18 3.41
4444 7067 5.424121 AAAAGTCAACGACCAATTCTCTG 57.576 39.130 0.00 0.00 32.18 3.35
4445 7068 5.674933 GAAAAGTCAACGACCAATTCTCT 57.325 39.130 0.00 0.00 32.18 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.