Multiple sequence alignment - TraesCS5B01G441800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G441800 chr5B 100.000 2891 0 0 1 2891 615009844 615012734 0.000000e+00 5339.0
1 TraesCS5B01G441800 chr5D 92.075 1123 49 18 706 1811 496560678 496561777 0.000000e+00 1544.0
2 TraesCS5B01G441800 chr5D 95.798 357 15 0 2535 2891 483329333 483329689 6.950000e-161 577.0
3 TraesCS5B01G441800 chr5D 86.250 240 23 5 470 706 6105582 6105350 4.780000e-63 252.0
4 TraesCS5B01G441800 chr5D 100.000 30 0 0 1886 1915 65856699 65856670 4.020000e-04 56.5
5 TraesCS5B01G441800 chr5A 90.172 987 55 14 706 1689 620414786 620415733 0.000000e+00 1247.0
6 TraesCS5B01G441800 chr5A 85.503 1152 86 35 741 1853 620478782 620479891 0.000000e+00 1127.0
7 TraesCS5B01G441800 chr5A 99.440 357 2 0 2535 2891 285680037 285680393 0.000000e+00 649.0
8 TraesCS5B01G441800 chr5A 89.623 106 11 0 568 673 3326306 3326411 5.020000e-28 135.0
9 TraesCS5B01G441800 chr2D 94.775 689 24 6 21 703 640503345 640502663 0.000000e+00 1062.0
10 TraesCS5B01G441800 chr3B 93.632 691 33 5 21 706 33721027 33721711 0.000000e+00 1022.0
11 TraesCS5B01G441800 chr3B 97.479 357 9 0 2535 2891 694138348 694138704 6.850000e-171 610.0
12 TraesCS5B01G441800 chr3B 96.089 358 10 1 2534 2891 42927051 42926698 5.370000e-162 580.0
13 TraesCS5B01G441800 chr3B 93.750 96 3 1 69 161 747704892 747704797 1.080000e-29 141.0
14 TraesCS5B01G441800 chr3B 97.143 35 0 1 1881 1915 70602596 70602629 1.120000e-04 58.4
15 TraesCS5B01G441800 chr3B 75.940 133 17 13 1881 2002 580524687 580524815 1.000000e-03 54.7
16 TraesCS5B01G441800 chr2B 94.371 604 23 6 107 706 172169406 172170002 0.000000e+00 917.0
17 TraesCS5B01G441800 chr2B 97.059 68 2 0 23 90 172165457 172165524 6.550000e-22 115.0
18 TraesCS5B01G441800 chr7A 98.305 354 6 0 2538 2891 35493117 35492764 3.160000e-174 621.0
19 TraesCS5B01G441800 chr1B 97.175 354 10 0 2538 2891 521449743 521449390 1.480000e-167 599.0
20 TraesCS5B01G441800 chr7B 96.919 357 9 2 2535 2891 355749236 355749590 5.330000e-167 597.0
21 TraesCS5B01G441800 chr7B 88.235 51 4 2 2262 2310 319583020 319582970 3.110000e-05 60.2
22 TraesCS5B01G441800 chr1A 89.231 390 28 4 21 404 587856872 587856491 2.610000e-130 475.0
23 TraesCS5B01G441800 chr1A 99.270 137 1 0 568 704 587851774 587851638 6.190000e-62 248.0
24 TraesCS5B01G441800 chr1A 88.000 75 5 2 404 478 587853043 587852973 5.130000e-13 86.1
25 TraesCS5B01G441800 chr1A 88.679 53 4 2 2261 2311 463965723 463965671 2.400000e-06 63.9
26 TraesCS5B01G441800 chr6B 92.691 301 17 2 24 319 442428492 442428192 2.060000e-116 429.0
27 TraesCS5B01G441800 chr6B 87.500 56 5 2 2257 2311 349466228 349466282 2.400000e-06 63.9
28 TraesCS5B01G441800 chr3D 83.607 488 37 18 21 502 48355726 48356176 4.460000e-113 418.0
29 TraesCS5B01G441800 chr3D 87.556 225 21 5 484 705 48359825 48360045 1.330000e-63 254.0
30 TraesCS5B01G441800 chr3D 84.746 59 3 5 2256 2311 38936227 38936172 1.000000e-03 54.7
31 TraesCS5B01G441800 chr7D 97.015 134 3 1 580 712 41448797 41448664 1.040000e-54 224.0
32 TraesCS5B01G441800 chr4B 89.655 58 3 2 1886 1941 9675771 9675715 1.440000e-08 71.3
33 TraesCS5B01G441800 chr4B 97.143 35 1 0 1881 1915 665286489 665286523 3.110000e-05 60.2
34 TraesCS5B01G441800 chr4A 87.302 63 5 2 1881 1941 735324051 735323990 5.170000e-08 69.4
35 TraesCS5B01G441800 chr4A 95.349 43 2 0 1881 1923 735697087 735697045 5.170000e-08 69.4
36 TraesCS5B01G441800 chr4A 78.125 128 15 6 1881 1995 736830761 736830634 5.170000e-08 69.4
37 TraesCS5B01G441800 chr4A 86.154 65 6 3 2357 2419 25224480 25224543 1.860000e-07 67.6
38 TraesCS5B01G441800 chr4A 87.037 54 1 6 2262 2311 509250027 509249976 4.020000e-04 56.5
39 TraesCS5B01G441800 chr4D 94.595 37 2 0 2039 2075 478031493 478031457 1.120000e-04 58.4
40 TraesCS5B01G441800 chr3A 100.000 29 0 0 2258 2286 688599607 688599635 1.000000e-03 54.7
41 TraesCS5B01G441800 chr3A 94.286 35 1 1 2259 2293 14855956 14855923 5.000000e-03 52.8
42 TraesCS5B01G441800 chrUn 100.000 28 0 0 2259 2286 98201106 98201133 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G441800 chr5B 615009844 615012734 2890 False 5339.0 5339 100.0000 1 2891 1 chr5B.!!$F1 2890
1 TraesCS5B01G441800 chr5D 496560678 496561777 1099 False 1544.0 1544 92.0750 706 1811 1 chr5D.!!$F2 1105
2 TraesCS5B01G441800 chr5A 620414786 620415733 947 False 1247.0 1247 90.1720 706 1689 1 chr5A.!!$F3 983
3 TraesCS5B01G441800 chr5A 620478782 620479891 1109 False 1127.0 1127 85.5030 741 1853 1 chr5A.!!$F4 1112
4 TraesCS5B01G441800 chr2D 640502663 640503345 682 True 1062.0 1062 94.7750 21 703 1 chr2D.!!$R1 682
5 TraesCS5B01G441800 chr3B 33721027 33721711 684 False 1022.0 1022 93.6320 21 706 1 chr3B.!!$F1 685
6 TraesCS5B01G441800 chr2B 172165457 172170002 4545 False 516.0 917 95.7150 23 706 2 chr2B.!!$F1 683
7 TraesCS5B01G441800 chr1A 587851638 587856872 5234 True 269.7 475 92.1670 21 704 3 chr1A.!!$R2 683
8 TraesCS5B01G441800 chr3D 48355726 48360045 4319 False 336.0 418 85.5815 21 705 2 chr3D.!!$F1 684

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
324 4199 1.713005 ATCATCCTTCCAGGGCGCAT 61.713 55.0 10.83 0.0 35.59 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2008 14226 0.034477 CATGGTACCAACCCCACCTC 60.034 60.0 20.76 0.0 46.16 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 4020 8.396272 ACTGCAGTATCTTCAAAACAGTATTT 57.604 30.769 20.16 0.00 35.49 1.40
223 4098 3.723542 CGAACAAATCGTCGCATTGCTAA 60.724 43.478 7.12 0.00 46.52 3.09
273 4148 3.459145 CGTAGCTGCTCTGTAGTCTCTA 58.541 50.000 4.91 0.00 0.00 2.43
324 4199 1.713005 ATCATCCTTCCAGGGCGCAT 61.713 55.000 10.83 0.00 35.59 4.73
539 11532 7.095732 ACTGCTTTAAACGACTAGCTAGAAAAC 60.096 37.037 27.45 11.34 34.77 2.43
544 11537 9.971922 TTTAAACGACTAGCTAGAAAACTTAGT 57.028 29.630 27.45 7.20 0.00 2.24
545 11538 7.870588 AAACGACTAGCTAGAAAACTTAGTG 57.129 36.000 27.45 6.37 0.00 2.74
546 11539 5.952033 ACGACTAGCTAGAAAACTTAGTGG 58.048 41.667 27.45 7.79 0.00 4.00
547 11540 5.476254 ACGACTAGCTAGAAAACTTAGTGGT 59.524 40.000 27.45 8.45 0.00 4.16
548 11541 6.656693 ACGACTAGCTAGAAAACTTAGTGGTA 59.343 38.462 27.45 0.00 0.00 3.25
821 12972 9.617523 AACATACATGATACAGATCAATCACAA 57.382 29.630 0.00 0.00 45.23 3.33
833 12984 8.312896 CAGATCAATCACAATCTTAGGATCTG 57.687 38.462 12.24 12.24 46.09 2.90
887 13043 4.314522 TGCTTAATTCTGTGGATCCCAA 57.685 40.909 9.90 0.00 34.18 4.12
900 13056 9.728100 TCTGTGGATCCCAATACATGATATATA 57.272 33.333 9.90 0.00 34.18 0.86
980 13136 2.063266 TCTTTGACATGGCGTAACGAC 58.937 47.619 0.00 0.00 34.27 4.34
1078 13262 6.664515 TGCTTTTACTTTACAACCATCTTCG 58.335 36.000 0.00 0.00 0.00 3.79
1124 13308 1.037030 GGCGAATTCCCTGGCAATGA 61.037 55.000 0.00 0.00 0.00 2.57
1216 13400 3.490759 GTCGTGATGGGCAGCGTG 61.491 66.667 0.00 0.00 0.00 5.34
1227 13411 1.153745 GCAGCGTGGTCTCCTACAG 60.154 63.158 0.00 0.00 0.00 2.74
1237 13421 1.065600 CTCCTACAGCAGCGCTCTC 59.934 63.158 7.13 1.64 36.40 3.20
1253 13437 3.121328 CGCTCTCGTGTAAGTTTTGTCAG 60.121 47.826 0.00 0.00 0.00 3.51
1289 13473 2.165030 GTGCACCTACCTAGTCGCTTAA 59.835 50.000 5.22 0.00 0.00 1.85
1290 13474 3.028850 TGCACCTACCTAGTCGCTTAAT 58.971 45.455 0.00 0.00 0.00 1.40
1291 13475 3.449737 TGCACCTACCTAGTCGCTTAATT 59.550 43.478 0.00 0.00 0.00 1.40
1292 13476 4.646040 TGCACCTACCTAGTCGCTTAATTA 59.354 41.667 0.00 0.00 0.00 1.40
1322 13508 2.372040 TTTACCTGTGGCTCGTGCGT 62.372 55.000 3.02 0.00 40.82 5.24
1685 13876 0.737219 GGCTGCTAGCAATTGACAGG 59.263 55.000 19.86 5.40 44.75 4.00
1689 13880 1.009829 GCTAGCAATTGACAGGGTCG 58.990 55.000 10.63 0.00 34.95 4.79
1738 13956 8.135529 ACTGTAGAATTGATTGATGATGCATTG 58.864 33.333 0.00 0.00 0.00 2.82
1740 13958 9.122779 TGTAGAATTGATTGATGATGCATTGTA 57.877 29.630 0.00 0.00 0.00 2.41
1849 14067 2.286713 TGCGTGTGTTTGATGCAAGTAC 60.287 45.455 0.00 0.00 32.37 2.73
1853 14071 2.289274 TGTGTTTGATGCAAGTACGGTG 59.711 45.455 0.00 0.00 0.00 4.94
1854 14072 2.289547 GTGTTTGATGCAAGTACGGTGT 59.710 45.455 0.00 0.00 0.00 4.16
1855 14073 2.946329 TGTTTGATGCAAGTACGGTGTT 59.054 40.909 0.00 0.00 0.00 3.32
1856 14074 4.024725 GTGTTTGATGCAAGTACGGTGTTA 60.025 41.667 0.00 0.00 0.00 2.41
1857 14075 4.024725 TGTTTGATGCAAGTACGGTGTTAC 60.025 41.667 0.00 0.00 0.00 2.50
1858 14076 3.388345 TGATGCAAGTACGGTGTTACA 57.612 42.857 0.00 0.00 0.00 2.41
1859 14077 3.729966 TGATGCAAGTACGGTGTTACAA 58.270 40.909 0.00 0.00 0.00 2.41
1860 14078 4.127907 TGATGCAAGTACGGTGTTACAAA 58.872 39.130 0.00 0.00 0.00 2.83
1861 14079 4.575236 TGATGCAAGTACGGTGTTACAAAA 59.425 37.500 0.00 0.00 0.00 2.44
1862 14080 4.959596 TGCAAGTACGGTGTTACAAAAA 57.040 36.364 0.00 0.00 0.00 1.94
1926 14144 8.895932 ATAGAAAAATTGTTTCTCATGTACGC 57.104 30.769 5.08 0.00 39.30 4.42
1927 14145 6.734137 AGAAAAATTGTTTCTCATGTACGCA 58.266 32.000 0.00 0.00 33.86 5.24
1928 14146 7.199766 AGAAAAATTGTTTCTCATGTACGCAA 58.800 30.769 0.00 0.00 33.86 4.85
1929 14147 7.704472 AGAAAAATTGTTTCTCATGTACGCAAA 59.296 29.630 0.00 0.00 33.86 3.68
1930 14148 7.763172 AAAATTGTTTCTCATGTACGCAAAA 57.237 28.000 0.00 0.00 0.00 2.44
1931 14149 7.763172 AAATTGTTTCTCATGTACGCAAAAA 57.237 28.000 0.00 0.00 0.00 1.94
2014 14232 9.784531 ATCTGAAAATATGTATTGTAGAGGTGG 57.215 33.333 0.00 0.00 0.00 4.61
2015 14233 8.210946 TCTGAAAATATGTATTGTAGAGGTGGG 58.789 37.037 0.00 0.00 0.00 4.61
2016 14234 7.287061 TGAAAATATGTATTGTAGAGGTGGGG 58.713 38.462 0.00 0.00 0.00 4.96
2017 14235 6.841781 AAATATGTATTGTAGAGGTGGGGT 57.158 37.500 0.00 0.00 0.00 4.95
2018 14236 6.841781 AATATGTATTGTAGAGGTGGGGTT 57.158 37.500 0.00 0.00 0.00 4.11
2019 14237 3.992943 TGTATTGTAGAGGTGGGGTTG 57.007 47.619 0.00 0.00 0.00 3.77
2020 14238 2.574369 TGTATTGTAGAGGTGGGGTTGG 59.426 50.000 0.00 0.00 0.00 3.77
2021 14239 1.755200 ATTGTAGAGGTGGGGTTGGT 58.245 50.000 0.00 0.00 0.00 3.67
2022 14240 2.419457 TTGTAGAGGTGGGGTTGGTA 57.581 50.000 0.00 0.00 0.00 3.25
2023 14241 1.648116 TGTAGAGGTGGGGTTGGTAC 58.352 55.000 0.00 0.00 0.00 3.34
2024 14242 0.907486 GTAGAGGTGGGGTTGGTACC 59.093 60.000 4.43 4.43 44.22 3.34
2025 14243 0.492730 TAGAGGTGGGGTTGGTACCA 59.507 55.000 11.60 11.60 46.96 3.25
2026 14244 0.178843 AGAGGTGGGGTTGGTACCAT 60.179 55.000 17.17 0.00 46.96 3.55
2027 14245 0.034477 GAGGTGGGGTTGGTACCATG 60.034 60.000 17.17 0.00 46.96 3.66
2028 14246 0.774491 AGGTGGGGTTGGTACCATGT 60.774 55.000 17.17 0.00 46.96 3.21
2029 14247 0.993470 GGTGGGGTTGGTACCATGTA 59.007 55.000 17.17 0.00 46.96 2.29
2030 14248 1.355043 GGTGGGGTTGGTACCATGTAA 59.645 52.381 17.17 0.00 46.96 2.41
2031 14249 2.225066 GGTGGGGTTGGTACCATGTAAA 60.225 50.000 17.17 0.00 46.96 2.01
2032 14250 3.498334 GTGGGGTTGGTACCATGTAAAA 58.502 45.455 17.17 0.00 46.96 1.52
2033 14251 3.508402 GTGGGGTTGGTACCATGTAAAAG 59.492 47.826 17.17 0.00 46.96 2.27
2034 14252 3.093814 GGGGTTGGTACCATGTAAAAGG 58.906 50.000 17.17 0.00 46.96 3.11
2035 14253 3.500836 GGGGTTGGTACCATGTAAAAGGT 60.501 47.826 17.17 0.00 46.96 3.50
2036 14254 4.263860 GGGGTTGGTACCATGTAAAAGGTA 60.264 45.833 17.17 0.00 46.96 3.08
2037 14255 5.323581 GGGTTGGTACCATGTAAAAGGTAA 58.676 41.667 17.17 0.00 46.96 2.85
2038 14256 5.953548 GGGTTGGTACCATGTAAAAGGTAAT 59.046 40.000 17.17 0.00 46.96 1.89
2039 14257 6.127563 GGGTTGGTACCATGTAAAAGGTAATG 60.128 42.308 17.17 0.00 46.96 1.90
2040 14258 6.327154 GTTGGTACCATGTAAAAGGTAATGC 58.673 40.000 17.17 0.00 41.71 3.56
2041 14259 4.951094 TGGTACCATGTAAAAGGTAATGCC 59.049 41.667 11.60 0.00 41.71 4.40
2042 14260 4.951094 GGTACCATGTAAAAGGTAATGCCA 59.049 41.667 7.15 0.00 41.71 4.92
2043 14261 5.419471 GGTACCATGTAAAAGGTAATGCCAA 59.581 40.000 7.15 0.00 41.71 4.52
2044 14262 6.097696 GGTACCATGTAAAAGGTAATGCCAAT 59.902 38.462 7.15 0.00 41.71 3.16
2045 14263 5.976458 ACCATGTAAAAGGTAATGCCAATG 58.024 37.500 0.00 0.00 40.61 2.82
2046 14264 5.483583 ACCATGTAAAAGGTAATGCCAATGT 59.516 36.000 0.00 0.00 40.61 2.71
2047 14265 5.811613 CCATGTAAAAGGTAATGCCAATGTG 59.188 40.000 0.00 0.00 40.61 3.21
2048 14266 5.398603 TGTAAAAGGTAATGCCAATGTGG 57.601 39.130 0.00 0.00 41.55 4.17
2049 14267 5.080337 TGTAAAAGGTAATGCCAATGTGGA 58.920 37.500 0.00 0.00 40.96 4.02
2050 14268 4.806640 AAAAGGTAATGCCAATGTGGAG 57.193 40.909 0.00 0.00 40.96 3.86
2051 14269 2.442236 AGGTAATGCCAATGTGGAGG 57.558 50.000 0.00 0.00 40.96 4.30
2052 14270 1.063717 AGGTAATGCCAATGTGGAGGG 60.064 52.381 0.00 0.00 40.96 4.30
2053 14271 1.402787 GTAATGCCAATGTGGAGGGG 58.597 55.000 0.00 0.00 40.96 4.79
2054 14272 0.396974 TAATGCCAATGTGGAGGGGC 60.397 55.000 0.00 0.00 40.96 5.80
2055 14273 2.172229 AATGCCAATGTGGAGGGGCT 62.172 55.000 0.00 0.00 46.53 5.19
2056 14274 2.440980 GCCAATGTGGAGGGGCTC 60.441 66.667 0.00 0.00 40.96 4.70
2057 14275 2.988839 GCCAATGTGGAGGGGCTCT 61.989 63.158 0.00 0.00 40.96 4.09
2058 14276 1.693640 CCAATGTGGAGGGGCTCTT 59.306 57.895 0.00 0.00 40.96 2.85
2059 14277 0.040204 CCAATGTGGAGGGGCTCTTT 59.960 55.000 0.00 0.00 40.96 2.52
2060 14278 1.550869 CCAATGTGGAGGGGCTCTTTT 60.551 52.381 0.00 0.00 40.96 2.27
2061 14279 1.821136 CAATGTGGAGGGGCTCTTTTC 59.179 52.381 0.00 0.00 0.00 2.29
2062 14280 0.332972 ATGTGGAGGGGCTCTTTTCC 59.667 55.000 0.00 0.00 0.00 3.13
2063 14281 1.000771 GTGGAGGGGCTCTTTTCCC 60.001 63.158 0.00 0.00 43.46 3.97
2069 14287 3.503998 GGGCTCTTTTCCCCATCTC 57.496 57.895 0.00 0.00 41.13 2.75
2070 14288 0.106469 GGGCTCTTTTCCCCATCTCC 60.106 60.000 0.00 0.00 41.13 3.71
2071 14289 0.922626 GGCTCTTTTCCCCATCTCCT 59.077 55.000 0.00 0.00 0.00 3.69
2072 14290 1.286257 GGCTCTTTTCCCCATCTCCTT 59.714 52.381 0.00 0.00 0.00 3.36
2073 14291 2.649190 GCTCTTTTCCCCATCTCCTTC 58.351 52.381 0.00 0.00 0.00 3.46
2074 14292 2.240921 GCTCTTTTCCCCATCTCCTTCT 59.759 50.000 0.00 0.00 0.00 2.85
2075 14293 3.308760 GCTCTTTTCCCCATCTCCTTCTT 60.309 47.826 0.00 0.00 0.00 2.52
2076 14294 4.812442 GCTCTTTTCCCCATCTCCTTCTTT 60.812 45.833 0.00 0.00 0.00 2.52
2077 14295 5.573707 GCTCTTTTCCCCATCTCCTTCTTTA 60.574 44.000 0.00 0.00 0.00 1.85
2078 14296 6.463053 TCTTTTCCCCATCTCCTTCTTTAA 57.537 37.500 0.00 0.00 0.00 1.52
2079 14297 7.044496 TCTTTTCCCCATCTCCTTCTTTAAT 57.956 36.000 0.00 0.00 0.00 1.40
2080 14298 8.170121 TCTTTTCCCCATCTCCTTCTTTAATA 57.830 34.615 0.00 0.00 0.00 0.98
2081 14299 8.053355 TCTTTTCCCCATCTCCTTCTTTAATAC 58.947 37.037 0.00 0.00 0.00 1.89
2082 14300 7.525158 TTTCCCCATCTCCTTCTTTAATACT 57.475 36.000 0.00 0.00 0.00 2.12
2083 14301 8.632731 TTTCCCCATCTCCTTCTTTAATACTA 57.367 34.615 0.00 0.00 0.00 1.82
2084 14302 8.814448 TTCCCCATCTCCTTCTTTAATACTAT 57.186 34.615 0.00 0.00 0.00 2.12
2085 14303 9.907819 TTCCCCATCTCCTTCTTTAATACTATA 57.092 33.333 0.00 0.00 0.00 1.31
2086 14304 9.907819 TCCCCATCTCCTTCTTTAATACTATAA 57.092 33.333 0.00 0.00 0.00 0.98
2103 14321 6.851222 ACTATAAAGTATGCACACTCATGC 57.149 37.500 0.00 0.00 39.14 4.06
2104 14322 8.150296 ATACTATAAAGTATGCACACTCATGCA 58.850 33.333 0.00 2.48 45.34 3.96
2112 14330 3.516681 GCACACTCATGCATATTCGAG 57.483 47.619 0.00 4.40 45.39 4.04
2113 14331 3.126073 GCACACTCATGCATATTCGAGA 58.874 45.455 16.34 0.93 45.39 4.04
2114 14332 3.744942 GCACACTCATGCATATTCGAGAT 59.255 43.478 16.34 3.91 45.39 2.75
2115 14333 4.925646 GCACACTCATGCATATTCGAGATA 59.074 41.667 16.34 0.00 45.39 1.98
2116 14334 5.406477 GCACACTCATGCATATTCGAGATAA 59.594 40.000 16.34 0.00 45.39 1.75
2117 14335 6.073602 GCACACTCATGCATATTCGAGATAAA 60.074 38.462 16.34 0.00 45.39 1.40
2118 14336 7.508134 CACACTCATGCATATTCGAGATAAAG 58.492 38.462 16.34 5.55 0.00 1.85
2119 14337 7.170489 CACACTCATGCATATTCGAGATAAAGT 59.830 37.037 16.34 6.02 0.00 2.66
2120 14338 8.360390 ACACTCATGCATATTCGAGATAAAGTA 58.640 33.333 16.34 0.00 0.00 2.24
2121 14339 9.363763 CACTCATGCATATTCGAGATAAAGTAT 57.636 33.333 16.34 0.00 0.00 2.12
2122 14340 9.935241 ACTCATGCATATTCGAGATAAAGTATT 57.065 29.630 16.34 0.00 0.00 1.89
2223 14441 9.444600 AAAGGTTCTCACGTATACATAAAATGT 57.555 29.630 3.32 0.00 46.92 2.71
2338 14556 9.577110 TCACAACGTACATAGAATAAAAGTAGG 57.423 33.333 0.00 0.00 0.00 3.18
2339 14557 9.577110 CACAACGTACATAGAATAAAAGTAGGA 57.423 33.333 0.00 0.00 0.00 2.94
2392 14610 9.796062 ACTATGTACGTAAAAATGTTAAACGTG 57.204 29.630 15.70 5.00 45.44 4.49
2393 14611 9.796062 CTATGTACGTAAAAATGTTAAACGTGT 57.204 29.630 15.70 0.00 45.44 4.49
2395 14613 8.964367 TGTACGTAAAAATGTTAAACGTGTAC 57.036 30.769 15.70 9.55 45.44 2.90
2396 14614 8.595533 TGTACGTAAAAATGTTAAACGTGTACA 58.404 29.630 15.70 11.41 45.44 2.90
2397 14615 7.875306 ACGTAAAAATGTTAAACGTGTACAC 57.125 32.000 16.32 16.32 44.34 2.90
2398 14616 7.459486 ACGTAAAAATGTTAAACGTGTACACA 58.541 30.769 24.98 4.69 44.34 3.72
2399 14617 7.959651 ACGTAAAAATGTTAAACGTGTACACAA 59.040 29.630 24.98 9.42 44.34 3.33
2400 14618 8.783251 CGTAAAAATGTTAAACGTGTACACAAA 58.217 29.630 24.98 10.71 0.00 2.83
2404 14622 9.959775 AAAATGTTAAACGTGTACACAAAAATG 57.040 25.926 24.98 10.40 0.00 2.32
2405 14623 8.912787 AATGTTAAACGTGTACACAAAAATGA 57.087 26.923 24.98 4.89 0.00 2.57
2406 14624 9.522804 AATGTTAAACGTGTACACAAAAATGAT 57.477 25.926 24.98 6.93 0.00 2.45
2407 14625 8.912787 TGTTAAACGTGTACACAAAAATGATT 57.087 26.923 24.98 10.98 0.00 2.57
2408 14626 9.011407 TGTTAAACGTGTACACAAAAATGATTC 57.989 29.630 24.98 6.45 0.00 2.52
2409 14627 9.228636 GTTAAACGTGTACACAAAAATGATTCT 57.771 29.630 24.98 0.00 0.00 2.40
2410 14628 7.678194 AAACGTGTACACAAAAATGATTCTG 57.322 32.000 24.98 6.94 0.00 3.02
2411 14629 6.612247 ACGTGTACACAAAAATGATTCTGA 57.388 33.333 24.98 0.00 0.00 3.27
2412 14630 7.202016 ACGTGTACACAAAAATGATTCTGAT 57.798 32.000 24.98 0.00 0.00 2.90
2413 14631 7.077605 ACGTGTACACAAAAATGATTCTGATG 58.922 34.615 24.98 5.55 0.00 3.07
2414 14632 7.077605 CGTGTACACAAAAATGATTCTGATGT 58.922 34.615 24.98 0.00 0.00 3.06
2415 14633 8.227119 CGTGTACACAAAAATGATTCTGATGTA 58.773 33.333 24.98 0.00 0.00 2.29
2438 14656 9.402320 TGTATACAAAATATGTACATTGCCTGT 57.598 29.630 14.77 14.35 46.90 4.00
2439 14657 9.663904 GTATACAAAATATGTACATTGCCTGTG 57.336 33.333 14.77 7.84 46.90 3.66
2440 14658 5.964758 ACAAAATATGTACATTGCCTGTGG 58.035 37.500 14.77 0.00 41.63 4.17
2441 14659 5.714333 ACAAAATATGTACATTGCCTGTGGA 59.286 36.000 14.77 0.00 41.63 4.02
2442 14660 6.210385 ACAAAATATGTACATTGCCTGTGGAA 59.790 34.615 14.77 0.00 41.63 3.53
2443 14661 6.849085 AAATATGTACATTGCCTGTGGAAA 57.151 33.333 14.77 0.00 38.92 3.13
2444 14662 6.849085 AATATGTACATTGCCTGTGGAAAA 57.151 33.333 14.77 0.00 38.92 2.29
2445 14663 7.422465 AATATGTACATTGCCTGTGGAAAAT 57.578 32.000 14.77 0.00 38.92 1.82
2446 14664 5.743636 ATGTACATTGCCTGTGGAAAATT 57.256 34.783 1.41 0.00 38.92 1.82
2447 14665 5.543507 TGTACATTGCCTGTGGAAAATTT 57.456 34.783 0.00 0.00 38.92 1.82
2448 14666 5.923204 TGTACATTGCCTGTGGAAAATTTT 58.077 33.333 2.28 2.28 38.92 1.82
2449 14667 5.757320 TGTACATTGCCTGTGGAAAATTTTG 59.243 36.000 8.47 0.00 38.92 2.44
2450 14668 4.779696 ACATTGCCTGTGGAAAATTTTGT 58.220 34.783 8.47 0.00 36.48 2.83
2451 14669 5.192176 ACATTGCCTGTGGAAAATTTTGTT 58.808 33.333 8.47 0.00 36.48 2.83
2452 14670 5.296531 ACATTGCCTGTGGAAAATTTTGTTC 59.703 36.000 8.47 0.00 36.48 3.18
2453 14671 4.751767 TGCCTGTGGAAAATTTTGTTCT 57.248 36.364 8.47 0.00 0.00 3.01
2454 14672 4.692228 TGCCTGTGGAAAATTTTGTTCTC 58.308 39.130 8.47 0.00 0.00 2.87
2455 14673 4.161189 TGCCTGTGGAAAATTTTGTTCTCA 59.839 37.500 8.47 4.56 0.00 3.27
2456 14674 5.163322 TGCCTGTGGAAAATTTTGTTCTCAT 60.163 36.000 8.47 0.00 0.00 2.90
2457 14675 5.759763 GCCTGTGGAAAATTTTGTTCTCATT 59.240 36.000 8.47 0.00 0.00 2.57
2458 14676 6.928492 GCCTGTGGAAAATTTTGTTCTCATTA 59.072 34.615 8.47 0.00 0.00 1.90
2459 14677 7.440856 GCCTGTGGAAAATTTTGTTCTCATTAA 59.559 33.333 8.47 0.00 0.00 1.40
2460 14678 9.323985 CCTGTGGAAAATTTTGTTCTCATTAAA 57.676 29.630 8.47 0.00 0.00 1.52
2489 14707 7.887711 CATGGTCGTCATGTATTTGAAAATTG 58.112 34.615 11.43 0.00 46.11 2.32
2490 14708 6.976088 TGGTCGTCATGTATTTGAAAATTGT 58.024 32.000 0.00 0.00 0.00 2.71
2491 14709 7.429633 TGGTCGTCATGTATTTGAAAATTGTT 58.570 30.769 0.00 0.00 0.00 2.83
2492 14710 7.380870 TGGTCGTCATGTATTTGAAAATTGTTG 59.619 33.333 0.00 0.00 0.00 3.33
2493 14711 7.148820 GGTCGTCATGTATTTGAAAATTGTTGG 60.149 37.037 0.00 0.00 0.00 3.77
2494 14712 7.593273 GTCGTCATGTATTTGAAAATTGTTGGA 59.407 33.333 0.00 0.00 0.00 3.53
2495 14713 8.303156 TCGTCATGTATTTGAAAATTGTTGGAT 58.697 29.630 0.00 0.00 0.00 3.41
2496 14714 9.566530 CGTCATGTATTTGAAAATTGTTGGATA 57.433 29.630 0.00 0.00 0.00 2.59
2506 14724 9.473007 TTGAAAATTGTTGGATATGTATCTCCA 57.527 29.630 0.51 0.00 39.78 3.86
2507 14725 9.473007 TGAAAATTGTTGGATATGTATCTCCAA 57.527 29.630 7.42 7.42 46.63 3.53
2515 14733 8.450578 TTGGATATGTATCTCCAAATGTGTTC 57.549 34.615 8.71 0.00 46.01 3.18
2516 14734 7.572814 TGGATATGTATCTCCAAATGTGTTCA 58.427 34.615 0.00 0.00 38.59 3.18
2517 14735 8.052141 TGGATATGTATCTCCAAATGTGTTCAA 58.948 33.333 0.00 0.00 38.59 2.69
2518 14736 8.902806 GGATATGTATCTCCAAATGTGTTCAAA 58.097 33.333 0.51 0.00 33.28 2.69
2521 14739 7.581213 TGTATCTCCAAATGTGTTCAAAACT 57.419 32.000 0.00 0.00 0.00 2.66
2522 14740 8.684386 TGTATCTCCAAATGTGTTCAAAACTA 57.316 30.769 0.00 0.00 0.00 2.24
2523 14741 8.564574 TGTATCTCCAAATGTGTTCAAAACTAC 58.435 33.333 0.00 0.00 0.00 2.73
2524 14742 7.823745 ATCTCCAAATGTGTTCAAAACTACT 57.176 32.000 0.00 0.00 0.00 2.57
2525 14743 7.259290 TCTCCAAATGTGTTCAAAACTACTC 57.741 36.000 0.00 0.00 0.00 2.59
2526 14744 6.262273 TCTCCAAATGTGTTCAAAACTACTCC 59.738 38.462 0.00 0.00 0.00 3.85
2527 14745 5.300792 TCCAAATGTGTTCAAAACTACTCCC 59.699 40.000 0.00 0.00 0.00 4.30
2528 14746 5.301805 CCAAATGTGTTCAAAACTACTCCCT 59.698 40.000 0.00 0.00 0.00 4.20
2529 14747 6.438763 CAAATGTGTTCAAAACTACTCCCTC 58.561 40.000 0.00 0.00 0.00 4.30
2530 14748 4.081322 TGTGTTCAAAACTACTCCCTCC 57.919 45.455 0.00 0.00 0.00 4.30
2531 14749 3.064931 GTGTTCAAAACTACTCCCTCCG 58.935 50.000 0.00 0.00 0.00 4.63
2532 14750 2.701951 TGTTCAAAACTACTCCCTCCGT 59.298 45.455 0.00 0.00 0.00 4.69
2533 14751 3.243975 TGTTCAAAACTACTCCCTCCGTC 60.244 47.826 0.00 0.00 0.00 4.79
2534 14752 2.885616 TCAAAACTACTCCCTCCGTCT 58.114 47.619 0.00 0.00 0.00 4.18
2535 14753 2.824341 TCAAAACTACTCCCTCCGTCTC 59.176 50.000 0.00 0.00 0.00 3.36
2536 14754 1.461559 AAACTACTCCCTCCGTCTCG 58.538 55.000 0.00 0.00 0.00 4.04
2537 14755 0.617413 AACTACTCCCTCCGTCTCGA 59.383 55.000 0.00 0.00 0.00 4.04
2538 14756 0.178533 ACTACTCCCTCCGTCTCGAG 59.821 60.000 5.93 5.93 0.00 4.04
2539 14757 0.464870 CTACTCCCTCCGTCTCGAGA 59.535 60.000 12.08 12.08 30.97 4.04
2540 14758 1.071071 CTACTCCCTCCGTCTCGAGAT 59.929 57.143 19.90 1.15 30.97 2.75
2541 14759 0.464735 ACTCCCTCCGTCTCGAGATG 60.465 60.000 24.95 24.95 30.97 2.90
2546 14764 3.201494 CCGTCTCGAGATGGCAGT 58.799 61.111 34.67 0.00 43.52 4.40
2547 14765 1.513158 CCGTCTCGAGATGGCAGTT 59.487 57.895 34.67 0.00 43.52 3.16
2548 14766 0.108615 CCGTCTCGAGATGGCAGTTT 60.109 55.000 34.67 0.00 43.52 2.66
2549 14767 1.673033 CCGTCTCGAGATGGCAGTTTT 60.673 52.381 34.67 0.00 43.52 2.43
2550 14768 1.656095 CGTCTCGAGATGGCAGTTTTC 59.344 52.381 24.33 4.68 0.00 2.29
2551 14769 2.003301 GTCTCGAGATGGCAGTTTTCC 58.997 52.381 19.90 0.00 0.00 3.13
2552 14770 1.066143 TCTCGAGATGGCAGTTTTCCC 60.066 52.381 12.08 0.00 0.00 3.97
2553 14771 0.035439 TCGAGATGGCAGTTTTCCCC 60.035 55.000 0.00 0.00 0.00 4.81
2554 14772 1.369091 CGAGATGGCAGTTTTCCCCG 61.369 60.000 0.00 0.00 0.00 5.73
2555 14773 0.322546 GAGATGGCAGTTTTCCCCGT 60.323 55.000 0.00 0.00 0.00 5.28
2556 14774 0.609131 AGATGGCAGTTTTCCCCGTG 60.609 55.000 0.00 0.00 0.00 4.94
2557 14775 1.595093 GATGGCAGTTTTCCCCGTGG 61.595 60.000 0.00 0.00 0.00 4.94
2558 14776 2.075355 ATGGCAGTTTTCCCCGTGGA 62.075 55.000 0.00 0.00 39.54 4.02
2559 14777 1.971695 GGCAGTTTTCCCCGTGGAG 60.972 63.158 0.00 0.00 43.07 3.86
2560 14778 1.971695 GCAGTTTTCCCCGTGGAGG 60.972 63.158 0.00 0.00 43.07 4.30
2561 14779 1.971695 CAGTTTTCCCCGTGGAGGC 60.972 63.158 0.00 0.00 43.07 4.70
2562 14780 3.053896 GTTTTCCCCGTGGAGGCG 61.054 66.667 0.00 0.00 43.07 5.52
2594 14812 3.227810 GGATATACCCGCTAAGAACCG 57.772 52.381 0.00 0.00 0.00 4.44
2595 14813 2.094338 GGATATACCCGCTAAGAACCGG 60.094 54.545 0.00 0.00 43.97 5.28
2599 14817 2.186125 CCGCTAAGAACCGGGGAC 59.814 66.667 6.32 0.00 40.79 4.46
2611 14829 2.768045 GGGGACGGGGGACAAATT 59.232 61.111 0.00 0.00 0.00 1.82
2612 14830 1.680989 GGGGACGGGGGACAAATTG 60.681 63.158 0.00 0.00 0.00 2.32
2613 14831 2.348104 GGGACGGGGGACAAATTGC 61.348 63.158 0.00 0.00 0.00 3.56
2614 14832 2.348104 GGACGGGGGACAAATTGCC 61.348 63.158 0.00 0.00 33.96 4.52
2615 14833 1.304134 GACGGGGGACAAATTGCCT 60.304 57.895 0.00 0.00 35.51 4.75
2616 14834 1.304134 ACGGGGGACAAATTGCCTC 60.304 57.895 0.00 0.00 35.51 4.70
2617 14835 2.052104 CGGGGGACAAATTGCCTCC 61.052 63.158 13.21 13.21 41.70 4.30
2618 14836 1.078347 GGGGGACAAATTGCCTCCA 59.922 57.895 16.86 0.00 44.70 3.86
2619 14837 0.325577 GGGGGACAAATTGCCTCCAT 60.326 55.000 16.86 0.00 44.70 3.41
2620 14838 0.826062 GGGGACAAATTGCCTCCATG 59.174 55.000 0.00 0.00 35.51 3.66
2621 14839 0.826062 GGGACAAATTGCCTCCATGG 59.174 55.000 4.97 4.97 39.35 3.66
2622 14840 0.826062 GGACAAATTGCCTCCATGGG 59.174 55.000 13.02 2.26 36.00 4.00
2623 14841 1.619432 GGACAAATTGCCTCCATGGGA 60.619 52.381 13.02 0.00 36.00 4.37
2628 14846 2.594342 TTGCCTCCATGGGAATTGC 58.406 52.632 13.02 8.29 41.39 3.56
2629 14847 0.041535 TTGCCTCCATGGGAATTGCT 59.958 50.000 13.02 0.00 41.39 3.91
2630 14848 0.041535 TGCCTCCATGGGAATTGCTT 59.958 50.000 13.02 0.00 36.00 3.91
2631 14849 0.462789 GCCTCCATGGGAATTGCTTG 59.537 55.000 13.02 0.00 36.00 4.01
2632 14850 1.117150 CCTCCATGGGAATTGCTTGG 58.883 55.000 13.02 11.45 0.00 3.61
2633 14851 0.462789 CTCCATGGGAATTGCTTGGC 59.537 55.000 13.02 0.00 0.00 4.52
2634 14852 1.142314 CCATGGGAATTGCTTGGCG 59.858 57.895 2.85 0.00 0.00 5.69
2635 14853 1.142314 CATGGGAATTGCTTGGCGG 59.858 57.895 0.00 0.00 0.00 6.13
2636 14854 2.059786 ATGGGAATTGCTTGGCGGG 61.060 57.895 0.00 0.00 0.00 6.13
2637 14855 2.679996 GGGAATTGCTTGGCGGGT 60.680 61.111 0.00 0.00 0.00 5.28
2638 14856 1.379309 GGGAATTGCTTGGCGGGTA 60.379 57.895 0.00 0.00 0.00 3.69
2639 14857 1.663379 GGGAATTGCTTGGCGGGTAC 61.663 60.000 0.00 0.00 0.00 3.34
2658 14876 3.856508 CGATAGCATAACGGGGCG 58.143 61.111 0.00 0.00 32.87 6.13
2659 14877 1.736645 CGATAGCATAACGGGGCGG 60.737 63.158 0.00 0.00 32.87 6.13
2660 14878 1.375523 GATAGCATAACGGGGCGGG 60.376 63.158 0.00 0.00 34.54 6.13
2661 14879 2.798148 GATAGCATAACGGGGCGGGG 62.798 65.000 0.00 0.00 34.54 5.73
2663 14881 4.265056 GCATAACGGGGCGGGGAT 62.265 66.667 0.00 0.00 0.00 3.85
2664 14882 2.281484 CATAACGGGGCGGGGATG 60.281 66.667 0.00 0.00 0.00 3.51
2665 14883 3.566210 ATAACGGGGCGGGGATGG 61.566 66.667 0.00 0.00 0.00 3.51
2673 14891 4.055227 GCGGGGATGGGGGACAAA 62.055 66.667 0.00 0.00 0.00 2.83
2674 14892 3.015383 CGGGGATGGGGGACAAAT 58.985 61.111 0.00 0.00 0.00 2.32
2675 14893 1.309688 CGGGGATGGGGGACAAATT 59.690 57.895 0.00 0.00 0.00 1.82
2676 14894 0.755327 CGGGGATGGGGGACAAATTC 60.755 60.000 0.00 0.00 0.00 2.17
2677 14895 0.755327 GGGGATGGGGGACAAATTCG 60.755 60.000 0.00 0.00 0.00 3.34
2678 14896 1.391933 GGGATGGGGGACAAATTCGC 61.392 60.000 0.00 0.00 36.41 4.70
2683 14901 2.360726 GGGACAAATTCGCCCCGT 60.361 61.111 0.00 0.00 35.76 5.28
2684 14902 2.696759 GGGACAAATTCGCCCCGTG 61.697 63.158 0.00 0.00 35.76 4.94
2685 14903 2.696759 GGACAAATTCGCCCCGTGG 61.697 63.158 0.00 0.00 0.00 4.94
2686 14904 1.673009 GACAAATTCGCCCCGTGGA 60.673 57.895 0.00 0.00 0.00 4.02
2687 14905 1.644786 GACAAATTCGCCCCGTGGAG 61.645 60.000 0.00 0.00 0.00 3.86
2688 14906 2.750237 AAATTCGCCCCGTGGAGC 60.750 61.111 0.00 0.00 0.00 4.70
2689 14907 4.796495 AATTCGCCCCGTGGAGCC 62.796 66.667 0.00 0.00 0.00 4.70
2701 14919 2.854253 TGGAGCCTCCATGGATACC 58.146 57.895 16.63 15.76 42.67 2.73
2702 14920 0.768221 TGGAGCCTCCATGGATACCC 60.768 60.000 16.63 14.28 42.67 3.69
2703 14921 1.674057 GAGCCTCCATGGATACCCG 59.326 63.158 16.63 2.53 38.35 5.28
2704 14922 2.032681 GCCTCCATGGATACCCGC 59.967 66.667 16.63 8.41 38.35 6.13
2705 14923 2.750350 CCTCCATGGATACCCGCC 59.250 66.667 16.63 0.00 38.35 6.13
2706 14924 2.146724 CCTCCATGGATACCCGCCA 61.147 63.158 16.63 0.00 40.24 5.69
2707 14925 1.705002 CCTCCATGGATACCCGCCAA 61.705 60.000 16.63 0.00 39.21 4.52
2708 14926 0.535102 CTCCATGGATACCCGCCAAC 60.535 60.000 16.63 0.00 39.21 3.77
2709 14927 1.225983 CCATGGATACCCGCCAACA 59.774 57.895 5.56 0.00 39.21 3.33
2710 14928 0.395036 CCATGGATACCCGCCAACAA 60.395 55.000 5.56 0.00 39.21 2.83
2711 14929 0.738389 CATGGATACCCGCCAACAAC 59.262 55.000 0.00 0.00 39.21 3.32
2712 14930 0.623723 ATGGATACCCGCCAACAACT 59.376 50.000 0.00 0.00 39.21 3.16
2713 14931 0.322098 TGGATACCCGCCAACAACTG 60.322 55.000 0.00 0.00 34.29 3.16
2714 14932 0.035820 GGATACCCGCCAACAACTGA 60.036 55.000 0.00 0.00 0.00 3.41
2715 14933 1.084289 GATACCCGCCAACAACTGAC 58.916 55.000 0.00 0.00 0.00 3.51
2716 14934 0.398696 ATACCCGCCAACAACTGACA 59.601 50.000 0.00 0.00 0.00 3.58
2717 14935 0.398696 TACCCGCCAACAACTGACAT 59.601 50.000 0.00 0.00 0.00 3.06
2718 14936 1.172180 ACCCGCCAACAACTGACATG 61.172 55.000 0.00 0.00 0.00 3.21
2719 14937 1.172180 CCCGCCAACAACTGACATGT 61.172 55.000 0.00 0.00 0.00 3.21
2720 14938 0.040157 CCGCCAACAACTGACATGTG 60.040 55.000 1.15 0.00 0.00 3.21
2721 14939 0.040157 CGCCAACAACTGACATGTGG 60.040 55.000 1.15 0.00 0.00 4.17
2722 14940 0.314935 GCCAACAACTGACATGTGGG 59.685 55.000 1.15 0.00 43.60 4.61
2723 14941 1.979855 CCAACAACTGACATGTGGGA 58.020 50.000 1.15 0.00 43.47 4.37
2724 14942 1.608590 CCAACAACTGACATGTGGGAC 59.391 52.381 1.15 0.00 43.47 4.46
2725 14943 1.608590 CAACAACTGACATGTGGGACC 59.391 52.381 1.15 0.00 0.00 4.46
2726 14944 1.140312 ACAACTGACATGTGGGACCT 58.860 50.000 1.15 0.00 0.00 3.85
2727 14945 1.072331 ACAACTGACATGTGGGACCTC 59.928 52.381 1.15 0.00 0.00 3.85
2728 14946 0.693049 AACTGACATGTGGGACCTCC 59.307 55.000 1.15 0.00 0.00 4.30
2729 14947 0.178891 ACTGACATGTGGGACCTCCT 60.179 55.000 1.15 0.00 36.20 3.69
2730 14948 0.987294 CTGACATGTGGGACCTCCTT 59.013 55.000 1.15 0.00 36.20 3.36
2731 14949 0.984230 TGACATGTGGGACCTCCTTC 59.016 55.000 1.15 0.00 36.20 3.46
2732 14950 0.253327 GACATGTGGGACCTCCTTCC 59.747 60.000 1.15 0.00 36.20 3.46
2733 14951 0.475632 ACATGTGGGACCTCCTTCCA 60.476 55.000 0.00 0.00 37.40 3.53
2734 14952 0.698238 CATGTGGGACCTCCTTCCAA 59.302 55.000 0.00 0.00 37.40 3.53
2735 14953 1.075374 CATGTGGGACCTCCTTCCAAA 59.925 52.381 0.00 0.00 37.40 3.28
2736 14954 1.455822 TGTGGGACCTCCTTCCAAAT 58.544 50.000 0.00 0.00 37.40 2.32
2737 14955 2.638325 TGTGGGACCTCCTTCCAAATA 58.362 47.619 0.00 0.00 37.40 1.40
2738 14956 2.576191 TGTGGGACCTCCTTCCAAATAG 59.424 50.000 0.00 0.00 37.40 1.73
2739 14957 2.576648 GTGGGACCTCCTTCCAAATAGT 59.423 50.000 0.00 0.00 37.40 2.12
2740 14958 3.778629 GTGGGACCTCCTTCCAAATAGTA 59.221 47.826 0.00 0.00 37.40 1.82
2741 14959 4.037927 TGGGACCTCCTTCCAAATAGTAG 58.962 47.826 0.00 0.00 37.40 2.57
2742 14960 3.391626 GGGACCTCCTTCCAAATAGTAGG 59.608 52.174 0.00 0.00 37.40 3.18
2743 14961 3.181453 GGACCTCCTTCCAAATAGTAGGC 60.181 52.174 0.00 0.00 35.49 3.93
2744 14962 2.778270 ACCTCCTTCCAAATAGTAGGCC 59.222 50.000 0.00 0.00 0.00 5.19
2745 14963 2.777692 CCTCCTTCCAAATAGTAGGCCA 59.222 50.000 5.01 0.00 0.00 5.36
2746 14964 3.202151 CCTCCTTCCAAATAGTAGGCCAA 59.798 47.826 5.01 0.00 0.00 4.52
2747 14965 4.200092 CTCCTTCCAAATAGTAGGCCAAC 58.800 47.826 5.01 0.00 0.00 3.77
2748 14966 3.053917 TCCTTCCAAATAGTAGGCCAACC 60.054 47.826 5.01 0.00 0.00 3.77
2758 14976 2.352805 GGCCAACCTAGCAGCAGT 59.647 61.111 0.00 0.00 0.00 4.40
2759 14977 1.746991 GGCCAACCTAGCAGCAGTC 60.747 63.158 0.00 0.00 0.00 3.51
2760 14978 1.003355 GCCAACCTAGCAGCAGTCA 60.003 57.895 0.00 0.00 0.00 3.41
2761 14979 1.023513 GCCAACCTAGCAGCAGTCAG 61.024 60.000 0.00 0.00 0.00 3.51
2762 14980 1.023513 CCAACCTAGCAGCAGTCAGC 61.024 60.000 0.00 0.00 46.19 4.26
2771 14989 3.194719 GCAGTCAGCCATTCAGCC 58.805 61.111 0.00 0.00 37.23 4.85
2772 14990 1.676635 GCAGTCAGCCATTCAGCCA 60.677 57.895 0.00 0.00 37.23 4.75
2773 14991 1.930908 GCAGTCAGCCATTCAGCCAC 61.931 60.000 0.00 0.00 37.23 5.01
2774 14992 1.376424 AGTCAGCCATTCAGCCACG 60.376 57.895 0.00 0.00 0.00 4.94
2775 14993 2.046023 TCAGCCATTCAGCCACGG 60.046 61.111 0.00 0.00 0.00 4.94
2776 14994 3.818787 CAGCCATTCAGCCACGGC 61.819 66.667 0.00 0.00 45.23 5.68
2779 14997 4.738998 CCATTCAGCCACGGCCCA 62.739 66.667 3.95 0.00 43.17 5.36
2780 14998 2.676121 CATTCAGCCACGGCCCAA 60.676 61.111 3.95 0.00 43.17 4.12
2781 14999 2.361610 ATTCAGCCACGGCCCAAG 60.362 61.111 3.95 0.00 43.17 3.61
2782 15000 2.905996 ATTCAGCCACGGCCCAAGA 61.906 57.895 3.95 0.00 43.17 3.02
2783 15001 3.842925 TTCAGCCACGGCCCAAGAC 62.843 63.158 3.95 0.00 43.17 3.01
2791 15009 4.344865 GGCCCAAGACGAGCCCAA 62.345 66.667 0.00 0.00 41.00 4.12
2792 15010 3.056328 GCCCAAGACGAGCCCAAC 61.056 66.667 0.00 0.00 0.00 3.77
2793 15011 2.429930 CCCAAGACGAGCCCAACA 59.570 61.111 0.00 0.00 0.00 3.33
2794 15012 1.966451 CCCAAGACGAGCCCAACAC 60.966 63.158 0.00 0.00 0.00 3.32
2795 15013 1.227823 CCAAGACGAGCCCAACACA 60.228 57.895 0.00 0.00 0.00 3.72
2796 15014 1.507141 CCAAGACGAGCCCAACACAC 61.507 60.000 0.00 0.00 0.00 3.82
2797 15015 0.532862 CAAGACGAGCCCAACACACT 60.533 55.000 0.00 0.00 0.00 3.55
2798 15016 0.180406 AAGACGAGCCCAACACACTT 59.820 50.000 0.00 0.00 0.00 3.16
2799 15017 0.532862 AGACGAGCCCAACACACTTG 60.533 55.000 0.00 0.00 0.00 3.16
2800 15018 1.507141 GACGAGCCCAACACACTTGG 61.507 60.000 0.00 0.00 39.25 3.61
2801 15019 2.908073 CGAGCCCAACACACTTGGC 61.908 63.158 0.00 0.00 44.35 4.52
2802 15020 2.521708 AGCCCAACACACTTGGCC 60.522 61.111 0.00 0.00 45.14 5.36
2803 15021 2.521708 GCCCAACACACTTGGCCT 60.522 61.111 3.32 0.00 37.94 5.19
2804 15022 1.228429 GCCCAACACACTTGGCCTA 60.228 57.895 3.32 0.00 37.94 3.93
2805 15023 0.825840 GCCCAACACACTTGGCCTAA 60.826 55.000 3.32 0.00 37.94 2.69
2806 15024 0.958822 CCCAACACACTTGGCCTAAC 59.041 55.000 3.32 0.00 38.23 2.34
2807 15025 0.958822 CCAACACACTTGGCCTAACC 59.041 55.000 3.32 0.00 39.84 2.85
2808 15026 1.478654 CCAACACACTTGGCCTAACCT 60.479 52.381 3.32 0.00 40.22 3.50
2809 15027 2.224670 CCAACACACTTGGCCTAACCTA 60.225 50.000 3.32 0.00 40.22 3.08
2810 15028 3.482436 CAACACACTTGGCCTAACCTAA 58.518 45.455 3.32 0.00 40.22 2.69
2811 15029 3.136009 ACACACTTGGCCTAACCTAAC 57.864 47.619 3.32 0.00 40.22 2.34
2812 15030 2.709397 ACACACTTGGCCTAACCTAACT 59.291 45.455 3.32 0.00 40.22 2.24
2813 15031 3.905591 ACACACTTGGCCTAACCTAACTA 59.094 43.478 3.32 0.00 40.22 2.24
2814 15032 4.348754 ACACACTTGGCCTAACCTAACTAA 59.651 41.667 3.32 0.00 40.22 2.24
2815 15033 4.694037 CACACTTGGCCTAACCTAACTAAC 59.306 45.833 3.32 0.00 40.22 2.34
2816 15034 4.348754 ACACTTGGCCTAACCTAACTAACA 59.651 41.667 3.32 0.00 40.22 2.41
2817 15035 5.013808 ACACTTGGCCTAACCTAACTAACAT 59.986 40.000 3.32 0.00 40.22 2.71
2818 15036 5.354234 CACTTGGCCTAACCTAACTAACATG 59.646 44.000 3.32 0.00 40.22 3.21
2819 15037 3.881220 TGGCCTAACCTAACTAACATGC 58.119 45.455 3.32 0.00 40.22 4.06
2820 15038 3.264706 TGGCCTAACCTAACTAACATGCA 59.735 43.478 3.32 0.00 40.22 3.96
2821 15039 3.626217 GGCCTAACCTAACTAACATGCAC 59.374 47.826 0.00 0.00 34.51 4.57
2822 15040 3.308866 GCCTAACCTAACTAACATGCACG 59.691 47.826 0.00 0.00 0.00 5.34
2823 15041 3.869246 CCTAACCTAACTAACATGCACGG 59.131 47.826 0.00 0.00 0.00 4.94
2824 15042 3.688694 AACCTAACTAACATGCACGGA 57.311 42.857 0.00 0.00 0.00 4.69
2825 15043 2.968675 ACCTAACTAACATGCACGGAC 58.031 47.619 0.00 0.00 0.00 4.79
2826 15044 1.924524 CCTAACTAACATGCACGGACG 59.075 52.381 0.00 0.00 0.00 4.79
2827 15045 1.323534 CTAACTAACATGCACGGACGC 59.676 52.381 0.00 0.00 0.00 5.19
2829 15047 1.289109 ACTAACATGCACGGACGCAC 61.289 55.000 0.00 0.00 46.56 5.34
2830 15048 1.966493 CTAACATGCACGGACGCACC 61.966 60.000 0.00 0.00 46.56 5.01
2836 15054 4.742201 CACGGACGCACCCAGGAG 62.742 72.222 0.00 0.00 34.64 3.69
2843 15061 4.284550 GCACCCAGGAGCCCAACA 62.285 66.667 0.00 0.00 0.00 3.33
2844 15062 2.282462 CACCCAGGAGCCCAACAC 60.282 66.667 0.00 0.00 0.00 3.32
2845 15063 2.776526 ACCCAGGAGCCCAACACA 60.777 61.111 0.00 0.00 0.00 3.72
2846 15064 2.282462 CCCAGGAGCCCAACACAC 60.282 66.667 0.00 0.00 0.00 3.82
2847 15065 2.669569 CCAGGAGCCCAACACACG 60.670 66.667 0.00 0.00 0.00 4.49
2848 15066 3.357079 CAGGAGCCCAACACACGC 61.357 66.667 0.00 0.00 0.00 5.34
2849 15067 4.988598 AGGAGCCCAACACACGCG 62.989 66.667 3.53 3.53 0.00 6.01
2850 15068 4.980805 GGAGCCCAACACACGCGA 62.981 66.667 15.93 0.00 0.00 5.87
2851 15069 3.712881 GAGCCCAACACACGCGAC 61.713 66.667 15.93 0.00 0.00 5.19
2854 15072 4.619227 CCCAACACACGCGACCCT 62.619 66.667 15.93 0.00 0.00 4.34
2855 15073 3.041940 CCAACACACGCGACCCTC 61.042 66.667 15.93 0.00 0.00 4.30
2856 15074 3.041940 CAACACACGCGACCCTCC 61.042 66.667 15.93 0.00 0.00 4.30
2857 15075 3.231736 AACACACGCGACCCTCCT 61.232 61.111 15.93 0.00 0.00 3.69
2858 15076 3.222354 AACACACGCGACCCTCCTC 62.222 63.158 15.93 0.00 0.00 3.71
2859 15077 3.374402 CACACGCGACCCTCCTCT 61.374 66.667 15.93 0.00 0.00 3.69
2860 15078 3.063084 ACACGCGACCCTCCTCTC 61.063 66.667 15.93 0.00 0.00 3.20
2861 15079 4.180946 CACGCGACCCTCCTCTCG 62.181 72.222 15.93 0.00 0.00 4.04
2865 15083 3.578272 CGACCCTCCTCTCGCTCG 61.578 72.222 0.00 0.00 0.00 5.03
2866 15084 3.894947 GACCCTCCTCTCGCTCGC 61.895 72.222 0.00 0.00 0.00 5.03
2867 15085 4.434354 ACCCTCCTCTCGCTCGCT 62.434 66.667 0.00 0.00 0.00 4.93
2868 15086 3.591835 CCCTCCTCTCGCTCGCTC 61.592 72.222 0.00 0.00 0.00 5.03
2869 15087 3.591835 CCTCCTCTCGCTCGCTCC 61.592 72.222 0.00 0.00 0.00 4.70
2870 15088 2.515991 CTCCTCTCGCTCGCTCCT 60.516 66.667 0.00 0.00 0.00 3.69
2871 15089 2.515057 TCCTCTCGCTCGCTCCTC 60.515 66.667 0.00 0.00 0.00 3.71
2872 15090 2.515991 CCTCTCGCTCGCTCCTCT 60.516 66.667 0.00 0.00 0.00 3.69
2873 15091 2.118404 CCTCTCGCTCGCTCCTCTT 61.118 63.158 0.00 0.00 0.00 2.85
2874 15092 1.355210 CTCTCGCTCGCTCCTCTTC 59.645 63.158 0.00 0.00 0.00 2.87
2875 15093 2.058829 CTCTCGCTCGCTCCTCTTCC 62.059 65.000 0.00 0.00 0.00 3.46
2876 15094 2.044848 TCGCTCGCTCCTCTTCCT 60.045 61.111 0.00 0.00 0.00 3.36
2877 15095 2.058829 CTCGCTCGCTCCTCTTCCTC 62.059 65.000 0.00 0.00 0.00 3.71
2878 15096 2.410687 CGCTCGCTCCTCTTCCTCA 61.411 63.158 0.00 0.00 0.00 3.86
2879 15097 1.140804 GCTCGCTCCTCTTCCTCAC 59.859 63.158 0.00 0.00 0.00 3.51
2880 15098 1.599606 GCTCGCTCCTCTTCCTCACA 61.600 60.000 0.00 0.00 0.00 3.58
2881 15099 0.455410 CTCGCTCCTCTTCCTCACAG 59.545 60.000 0.00 0.00 0.00 3.66
2882 15100 1.153667 CGCTCCTCTTCCTCACAGC 60.154 63.158 0.00 0.00 0.00 4.40
2883 15101 1.153667 GCTCCTCTTCCTCACAGCG 60.154 63.158 0.00 0.00 0.00 5.18
2884 15102 1.153667 CTCCTCTTCCTCACAGCGC 60.154 63.158 0.00 0.00 0.00 5.92
2885 15103 1.881903 CTCCTCTTCCTCACAGCGCA 61.882 60.000 11.47 0.00 0.00 6.09
2886 15104 1.447489 CCTCTTCCTCACAGCGCAG 60.447 63.158 11.47 3.33 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 4.887655 AGTTTTTACTGCTAGCCAAACAGT 59.112 37.500 13.29 10.99 46.05 3.55
218 4093 5.445964 AGGAAAACAAGGAAGAAGTTAGCA 58.554 37.500 0.00 0.00 0.00 3.49
223 4098 5.594725 GGAAAGAGGAAAACAAGGAAGAAGT 59.405 40.000 0.00 0.00 0.00 3.01
353 4228 4.699522 GGAGGGGAAACAGCGCGT 62.700 66.667 8.43 0.00 0.00 6.01
423 7747 2.317609 ACGCACTGAACGACCATGC 61.318 57.895 0.00 0.00 0.00 4.06
539 11532 6.795098 TGTATGCAACAAAGTACCACTAAG 57.205 37.500 0.00 0.00 34.29 2.18
811 12959 8.270030 TGAACAGATCCTAAGATTGTGATTGAT 58.730 33.333 0.00 0.00 30.90 2.57
821 12972 8.816894 TGTTTAGTTCTGAACAGATCCTAAGAT 58.183 33.333 21.50 0.17 37.29 2.40
826 12977 9.965902 ATAATTGTTTAGTTCTGAACAGATCCT 57.034 29.630 21.50 7.36 37.12 3.24
833 12984 9.530129 CGAAGTCATAATTGTTTAGTTCTGAAC 57.470 33.333 12.54 12.54 0.00 3.18
864 13020 4.671831 TGGGATCCACAGAATTAAGCAAA 58.328 39.130 15.23 0.00 0.00 3.68
916 13072 1.269012 CCCCAAATGTGCACTCCATT 58.731 50.000 19.41 6.81 34.07 3.16
980 13136 4.539870 TCTTCTTTTCGAGCAAGCAAATG 58.460 39.130 0.00 0.00 0.00 2.32
1078 13262 3.128938 AGATGAGAGCAAAAGCAAGATGC 59.871 43.478 0.00 0.00 45.46 3.91
1100 13284 1.220749 CCAGGGAATTCGCCGAGAA 59.779 57.895 18.08 0.00 43.93 2.87
1124 13308 3.893763 CGCTCCGCTCATCTCGGT 61.894 66.667 1.22 0.00 46.49 4.69
1216 13400 2.202810 GCGCTGCTGTAGGAGACC 60.203 66.667 0.00 0.00 35.31 3.85
1227 13411 1.009389 AACTTACACGAGAGCGCTGC 61.009 55.000 18.48 5.56 42.48 5.25
1267 13451 1.141234 GCGACTAGGTAGGTGCACC 59.859 63.158 29.22 29.22 39.02 5.01
1322 13508 0.666274 CACCACGAAGTAGCTGCGAA 60.666 55.000 3.28 0.00 41.61 4.70
1685 13876 3.432252 CACACTGAATCTTTGTACCGACC 59.568 47.826 0.00 0.00 0.00 4.79
1689 13880 6.482308 AGTTGTACACACTGAATCTTTGTACC 59.518 38.462 0.00 0.00 41.14 3.34
1738 13956 9.713740 CAATCATTCAGTAAGAGAGCAAAATAC 57.286 33.333 0.00 0.00 0.00 1.89
1740 13958 8.571461 TCAATCATTCAGTAAGAGAGCAAAAT 57.429 30.769 0.00 0.00 0.00 1.82
1900 14118 9.982291 GCGTACATGAGAAACAATTTTTCTATA 57.018 29.630 0.00 7.95 38.73 1.31
1901 14119 8.511321 TGCGTACATGAGAAACAATTTTTCTAT 58.489 29.630 0.00 7.08 38.73 1.98
1902 14120 7.866729 TGCGTACATGAGAAACAATTTTTCTA 58.133 30.769 0.00 5.75 38.73 2.10
1903 14121 6.734137 TGCGTACATGAGAAACAATTTTTCT 58.266 32.000 0.00 12.49 41.08 2.52
1904 14122 6.984740 TGCGTACATGAGAAACAATTTTTC 57.015 33.333 0.00 5.48 0.00 2.29
1905 14123 7.763172 TTTGCGTACATGAGAAACAATTTTT 57.237 28.000 0.00 0.00 0.00 1.94
1906 14124 7.763172 TTTTGCGTACATGAGAAACAATTTT 57.237 28.000 0.00 0.00 0.00 1.82
1907 14125 7.763172 TTTTTGCGTACATGAGAAACAATTT 57.237 28.000 0.00 0.00 0.00 1.82
1988 14206 9.784531 CCACCTCTACAATACATATTTTCAGAT 57.215 33.333 0.00 0.00 0.00 2.90
1989 14207 8.210946 CCCACCTCTACAATACATATTTTCAGA 58.789 37.037 0.00 0.00 0.00 3.27
1990 14208 7.445402 CCCCACCTCTACAATACATATTTTCAG 59.555 40.741 0.00 0.00 0.00 3.02
1991 14209 7.092174 ACCCCACCTCTACAATACATATTTTCA 60.092 37.037 0.00 0.00 0.00 2.69
1992 14210 7.287810 ACCCCACCTCTACAATACATATTTTC 58.712 38.462 0.00 0.00 0.00 2.29
1993 14211 7.220890 ACCCCACCTCTACAATACATATTTT 57.779 36.000 0.00 0.00 0.00 1.82
1994 14212 6.841781 ACCCCACCTCTACAATACATATTT 57.158 37.500 0.00 0.00 0.00 1.40
1995 14213 6.410388 CCAACCCCACCTCTACAATACATATT 60.410 42.308 0.00 0.00 0.00 1.28
1996 14214 5.073144 CCAACCCCACCTCTACAATACATAT 59.927 44.000 0.00 0.00 0.00 1.78
1997 14215 4.410883 CCAACCCCACCTCTACAATACATA 59.589 45.833 0.00 0.00 0.00 2.29
1998 14216 3.202151 CCAACCCCACCTCTACAATACAT 59.798 47.826 0.00 0.00 0.00 2.29
1999 14217 2.574369 CCAACCCCACCTCTACAATACA 59.426 50.000 0.00 0.00 0.00 2.29
2000 14218 2.574824 ACCAACCCCACCTCTACAATAC 59.425 50.000 0.00 0.00 0.00 1.89
2001 14219 2.923908 ACCAACCCCACCTCTACAATA 58.076 47.619 0.00 0.00 0.00 1.90
2002 14220 1.755200 ACCAACCCCACCTCTACAAT 58.245 50.000 0.00 0.00 0.00 2.71
2003 14221 1.980036 GTACCAACCCCACCTCTACAA 59.020 52.381 0.00 0.00 0.00 2.41
2004 14222 1.648116 GTACCAACCCCACCTCTACA 58.352 55.000 0.00 0.00 0.00 2.74
2005 14223 0.907486 GGTACCAACCCCACCTCTAC 59.093 60.000 7.15 0.00 40.21 2.59
2006 14224 0.492730 TGGTACCAACCCCACCTCTA 59.507 55.000 13.60 0.00 46.16 2.43
2007 14225 0.178843 ATGGTACCAACCCCACCTCT 60.179 55.000 20.76 0.00 46.16 3.69
2008 14226 0.034477 CATGGTACCAACCCCACCTC 60.034 60.000 20.76 0.00 46.16 3.85
2009 14227 0.774491 ACATGGTACCAACCCCACCT 60.774 55.000 20.76 0.00 46.16 4.00
2010 14228 0.993470 TACATGGTACCAACCCCACC 59.007 55.000 20.76 0.00 46.16 4.61
2011 14229 2.883122 TTACATGGTACCAACCCCAC 57.117 50.000 20.76 0.00 46.16 4.61
2012 14230 3.500654 CCTTTTACATGGTACCAACCCCA 60.501 47.826 20.76 0.02 46.16 4.96
2013 14231 3.093814 CCTTTTACATGGTACCAACCCC 58.906 50.000 20.76 0.00 46.16 4.95
2014 14232 3.770046 ACCTTTTACATGGTACCAACCC 58.230 45.455 20.76 0.00 46.16 4.11
2015 14233 6.626402 GCATTACCTTTTACATGGTACCAACC 60.626 42.308 20.76 0.00 46.98 3.77
2016 14234 6.327154 GCATTACCTTTTACATGGTACCAAC 58.673 40.000 20.76 0.00 38.40 3.77
2017 14235 5.419471 GGCATTACCTTTTACATGGTACCAA 59.581 40.000 20.76 0.00 38.40 3.67
2018 14236 4.951094 GGCATTACCTTTTACATGGTACCA 59.049 41.667 18.99 18.99 38.40 3.25
2019 14237 4.951094 TGGCATTACCTTTTACATGGTACC 59.049 41.667 4.43 4.43 38.40 3.34
2020 14238 6.518208 TTGGCATTACCTTTTACATGGTAC 57.482 37.500 0.00 0.00 38.40 3.34
2021 14239 6.665680 ACATTGGCATTACCTTTTACATGGTA 59.334 34.615 0.00 0.00 40.22 3.25
2022 14240 5.483583 ACATTGGCATTACCTTTTACATGGT 59.516 36.000 0.00 0.00 40.22 3.55
2023 14241 5.811613 CACATTGGCATTACCTTTTACATGG 59.188 40.000 0.00 0.00 40.22 3.66
2024 14242 5.811613 CCACATTGGCATTACCTTTTACATG 59.188 40.000 0.00 0.00 40.22 3.21
2025 14243 5.719085 TCCACATTGGCATTACCTTTTACAT 59.281 36.000 0.00 0.00 37.47 2.29
2026 14244 5.080337 TCCACATTGGCATTACCTTTTACA 58.920 37.500 0.00 0.00 37.47 2.41
2027 14245 5.394115 CCTCCACATTGGCATTACCTTTTAC 60.394 44.000 0.00 0.00 37.47 2.01
2028 14246 4.709397 CCTCCACATTGGCATTACCTTTTA 59.291 41.667 0.00 0.00 37.47 1.52
2029 14247 3.515104 CCTCCACATTGGCATTACCTTTT 59.485 43.478 0.00 0.00 37.47 2.27
2030 14248 3.099141 CCTCCACATTGGCATTACCTTT 58.901 45.455 0.00 0.00 37.47 3.11
2031 14249 2.624029 CCCTCCACATTGGCATTACCTT 60.624 50.000 0.00 0.00 37.47 3.50
2032 14250 1.063717 CCCTCCACATTGGCATTACCT 60.064 52.381 0.00 0.00 37.47 3.08
2033 14251 1.402787 CCCTCCACATTGGCATTACC 58.597 55.000 0.00 0.00 37.47 2.85
2034 14252 1.402787 CCCCTCCACATTGGCATTAC 58.597 55.000 0.00 0.00 37.47 1.89
2035 14253 0.396974 GCCCCTCCACATTGGCATTA 60.397 55.000 0.00 0.00 43.46 1.90
2036 14254 1.686800 GCCCCTCCACATTGGCATT 60.687 57.895 0.00 0.00 43.46 3.56
2037 14255 2.042639 GCCCCTCCACATTGGCAT 60.043 61.111 0.00 0.00 43.46 4.40
2038 14256 3.267233 AGCCCCTCCACATTGGCA 61.267 61.111 1.86 0.00 46.45 4.92
2039 14257 2.440980 GAGCCCCTCCACATTGGC 60.441 66.667 0.00 0.00 44.35 4.52
2040 14258 0.040204 AAAGAGCCCCTCCACATTGG 59.960 55.000 0.00 0.00 39.43 3.16
2041 14259 1.821136 GAAAAGAGCCCCTCCACATTG 59.179 52.381 0.00 0.00 0.00 2.82
2042 14260 1.272704 GGAAAAGAGCCCCTCCACATT 60.273 52.381 0.00 0.00 0.00 2.71
2043 14261 0.332972 GGAAAAGAGCCCCTCCACAT 59.667 55.000 0.00 0.00 0.00 3.21
2044 14262 1.767692 GGAAAAGAGCCCCTCCACA 59.232 57.895 0.00 0.00 0.00 4.17
2045 14263 1.000771 GGGAAAAGAGCCCCTCCAC 60.001 63.158 0.00 0.00 39.81 4.02
2046 14264 3.508048 GGGAAAAGAGCCCCTCCA 58.492 61.111 0.00 0.00 39.81 3.86
2051 14269 0.106469 GGAGATGGGGAAAAGAGCCC 60.106 60.000 0.00 0.00 45.25 5.19
2052 14270 0.922626 AGGAGATGGGGAAAAGAGCC 59.077 55.000 0.00 0.00 0.00 4.70
2053 14271 2.240921 AGAAGGAGATGGGGAAAAGAGC 59.759 50.000 0.00 0.00 0.00 4.09
2054 14272 4.582973 AAGAAGGAGATGGGGAAAAGAG 57.417 45.455 0.00 0.00 0.00 2.85
2055 14273 6.463053 TTAAAGAAGGAGATGGGGAAAAGA 57.537 37.500 0.00 0.00 0.00 2.52
2056 14274 8.055790 AGTATTAAAGAAGGAGATGGGGAAAAG 58.944 37.037 0.00 0.00 0.00 2.27
2057 14275 7.939781 AGTATTAAAGAAGGAGATGGGGAAAA 58.060 34.615 0.00 0.00 0.00 2.29
2058 14276 7.525158 AGTATTAAAGAAGGAGATGGGGAAA 57.475 36.000 0.00 0.00 0.00 3.13
2059 14277 8.814448 ATAGTATTAAAGAAGGAGATGGGGAA 57.186 34.615 0.00 0.00 0.00 3.97
2060 14278 9.907819 TTATAGTATTAAAGAAGGAGATGGGGA 57.092 33.333 0.00 0.00 0.00 4.81
2077 14295 8.993121 GCATGAGTGTGCATACTTTATAGTATT 58.007 33.333 17.83 0.00 44.01 1.89
2078 14296 8.539770 GCATGAGTGTGCATACTTTATAGTAT 57.460 34.615 17.83 0.43 46.18 2.12
2079 14297 7.946655 GCATGAGTGTGCATACTTTATAGTA 57.053 36.000 17.83 0.00 44.43 1.82
2080 14298 6.851222 GCATGAGTGTGCATACTTTATAGT 57.149 37.500 17.83 0.00 44.43 2.12
2092 14310 3.126073 TCTCGAATATGCATGAGTGTGC 58.874 45.455 10.16 0.00 45.25 4.57
2093 14311 7.170489 ACTTTATCTCGAATATGCATGAGTGTG 59.830 37.037 10.16 0.00 0.00 3.82
2094 14312 7.212976 ACTTTATCTCGAATATGCATGAGTGT 58.787 34.615 10.16 4.01 0.00 3.55
2095 14313 7.649370 ACTTTATCTCGAATATGCATGAGTG 57.351 36.000 10.16 0.00 0.00 3.51
2096 14314 9.935241 AATACTTTATCTCGAATATGCATGAGT 57.065 29.630 10.16 1.51 0.00 3.41
2197 14415 9.444600 ACATTTTATGTATACGTGAGAACCTTT 57.555 29.630 7.89 0.00 42.78 3.11
2312 14530 9.577110 CCTACTTTTATTCTATGTACGTTGTGA 57.423 33.333 0.00 0.00 0.00 3.58
2313 14531 9.577110 TCCTACTTTTATTCTATGTACGTTGTG 57.423 33.333 0.00 0.00 0.00 3.33
2366 14584 9.796062 CACGTTTAACATTTTTACGTACATAGT 57.204 29.630 0.00 0.00 42.81 2.12
2367 14585 9.796062 ACACGTTTAACATTTTTACGTACATAG 57.204 29.630 0.00 0.00 42.81 2.23
2369 14587 9.579610 GTACACGTTTAACATTTTTACGTACAT 57.420 29.630 0.00 0.00 42.81 2.29
2370 14588 8.595533 TGTACACGTTTAACATTTTTACGTACA 58.404 29.630 0.00 0.00 42.81 2.90
2371 14589 8.868732 GTGTACACGTTTAACATTTTTACGTAC 58.131 33.333 10.84 0.00 42.81 3.67
2372 14590 8.595533 TGTGTACACGTTTAACATTTTTACGTA 58.404 29.630 20.61 0.00 42.81 3.57
2373 14591 7.459486 TGTGTACACGTTTAACATTTTTACGT 58.541 30.769 20.61 0.00 45.21 3.57
2374 14592 7.873758 TGTGTACACGTTTAACATTTTTACG 57.126 32.000 20.61 0.00 38.14 3.18
2378 14596 9.959775 CATTTTTGTGTACACGTTTAACATTTT 57.040 25.926 20.61 0.00 0.00 1.82
2379 14597 9.355215 TCATTTTTGTGTACACGTTTAACATTT 57.645 25.926 20.61 0.00 0.00 2.32
2380 14598 8.912787 TCATTTTTGTGTACACGTTTAACATT 57.087 26.923 20.61 0.00 0.00 2.71
2381 14599 9.522804 AATCATTTTTGTGTACACGTTTAACAT 57.477 25.926 20.61 8.23 0.00 2.71
2382 14600 8.912787 AATCATTTTTGTGTACACGTTTAACA 57.087 26.923 20.61 6.43 0.00 2.41
2383 14601 9.228636 AGAATCATTTTTGTGTACACGTTTAAC 57.771 29.630 20.61 5.79 0.00 2.01
2384 14602 9.227490 CAGAATCATTTTTGTGTACACGTTTAA 57.773 29.630 20.61 12.16 0.00 1.52
2385 14603 8.613482 TCAGAATCATTTTTGTGTACACGTTTA 58.387 29.630 20.61 7.26 0.00 2.01
2386 14604 7.476667 TCAGAATCATTTTTGTGTACACGTTT 58.523 30.769 20.61 6.88 0.00 3.60
2387 14605 7.022055 TCAGAATCATTTTTGTGTACACGTT 57.978 32.000 20.61 5.66 0.00 3.99
2388 14606 6.612247 TCAGAATCATTTTTGTGTACACGT 57.388 33.333 20.61 2.08 0.00 4.49
2389 14607 7.077605 ACATCAGAATCATTTTTGTGTACACG 58.922 34.615 20.61 5.80 0.00 4.49
2412 14630 9.402320 ACAGGCAATGTACATATTTTGTATACA 57.598 29.630 9.21 0.08 42.63 2.29
2413 14631 9.663904 CACAGGCAATGTACATATTTTGTATAC 57.336 33.333 9.21 0.00 42.63 1.47
2414 14632 8.845227 CCACAGGCAATGTACATATTTTGTATA 58.155 33.333 9.21 0.00 42.63 1.47
2415 14633 7.559533 TCCACAGGCAATGTACATATTTTGTAT 59.440 33.333 9.21 0.00 42.63 2.29
2416 14634 6.887002 TCCACAGGCAATGTACATATTTTGTA 59.113 34.615 9.21 0.00 41.41 2.41
2417 14635 5.714333 TCCACAGGCAATGTACATATTTTGT 59.286 36.000 9.21 9.12 41.41 2.83
2418 14636 6.206395 TCCACAGGCAATGTACATATTTTG 57.794 37.500 9.21 5.67 41.41 2.44
2419 14637 6.849085 TTCCACAGGCAATGTACATATTTT 57.151 33.333 9.21 0.00 41.41 1.82
2420 14638 6.849085 TTTCCACAGGCAATGTACATATTT 57.151 33.333 9.21 0.00 41.41 1.40
2421 14639 6.849085 TTTTCCACAGGCAATGTACATATT 57.151 33.333 9.21 0.00 41.41 1.28
2422 14640 7.422465 AATTTTCCACAGGCAATGTACATAT 57.578 32.000 9.21 0.00 41.41 1.78
2423 14641 6.849085 AATTTTCCACAGGCAATGTACATA 57.151 33.333 9.21 0.00 41.41 2.29
2424 14642 5.743636 AATTTTCCACAGGCAATGTACAT 57.256 34.783 1.41 1.41 41.41 2.29
2425 14643 5.543507 AAATTTTCCACAGGCAATGTACA 57.456 34.783 0.00 0.00 41.41 2.90
2426 14644 5.757808 ACAAAATTTTCCACAGGCAATGTAC 59.242 36.000 0.00 0.00 41.41 2.90
2427 14645 5.923204 ACAAAATTTTCCACAGGCAATGTA 58.077 33.333 0.00 0.00 41.41 2.29
2428 14646 4.779696 ACAAAATTTTCCACAGGCAATGT 58.220 34.783 0.00 0.00 45.43 2.71
2429 14647 5.528320 AGAACAAAATTTTCCACAGGCAATG 59.472 36.000 0.00 0.00 0.00 2.82
2430 14648 5.683681 AGAACAAAATTTTCCACAGGCAAT 58.316 33.333 0.00 0.00 0.00 3.56
2431 14649 5.096443 AGAACAAAATTTTCCACAGGCAA 57.904 34.783 0.00 0.00 0.00 4.52
2432 14650 4.161189 TGAGAACAAAATTTTCCACAGGCA 59.839 37.500 0.00 0.00 0.00 4.75
2433 14651 4.692228 TGAGAACAAAATTTTCCACAGGC 58.308 39.130 0.00 0.00 0.00 4.85
2434 14652 8.885494 TTAATGAGAACAAAATTTTCCACAGG 57.115 30.769 0.00 0.00 0.00 4.00
2465 14683 7.601856 ACAATTTTCAAATACATGACGACCAT 58.398 30.769 0.00 0.00 35.44 3.55
2466 14684 6.976088 ACAATTTTCAAATACATGACGACCA 58.024 32.000 0.00 0.00 0.00 4.02
2467 14685 7.148820 CCAACAATTTTCAAATACATGACGACC 60.149 37.037 0.00 0.00 0.00 4.79
2468 14686 7.593273 TCCAACAATTTTCAAATACATGACGAC 59.407 33.333 0.00 0.00 0.00 4.34
2469 14687 7.652727 TCCAACAATTTTCAAATACATGACGA 58.347 30.769 0.00 0.00 0.00 4.20
2470 14688 7.865875 TCCAACAATTTTCAAATACATGACG 57.134 32.000 0.00 0.00 0.00 4.35
2480 14698 9.473007 TGGAGATACATATCCAACAATTTTCAA 57.527 29.630 3.08 0.00 44.52 2.69
2491 14709 7.572814 TGAACACATTTGGAGATACATATCCA 58.427 34.615 1.40 1.40 45.69 3.41
2492 14710 8.450578 TTGAACACATTTGGAGATACATATCC 57.549 34.615 0.00 0.00 38.64 2.59
2495 14713 9.295825 AGTTTTGAACACATTTGGAGATACATA 57.704 29.630 0.00 0.00 0.00 2.29
2496 14714 8.181904 AGTTTTGAACACATTTGGAGATACAT 57.818 30.769 0.00 0.00 0.00 2.29
2497 14715 7.581213 AGTTTTGAACACATTTGGAGATACA 57.419 32.000 0.00 0.00 0.00 2.29
2498 14716 8.784043 AGTAGTTTTGAACACATTTGGAGATAC 58.216 33.333 0.00 0.00 0.00 2.24
2499 14717 8.918202 AGTAGTTTTGAACACATTTGGAGATA 57.082 30.769 0.00 0.00 0.00 1.98
2500 14718 7.040409 GGAGTAGTTTTGAACACATTTGGAGAT 60.040 37.037 0.00 0.00 0.00 2.75
2501 14719 6.262273 GGAGTAGTTTTGAACACATTTGGAGA 59.738 38.462 0.00 0.00 0.00 3.71
2502 14720 6.438763 GGAGTAGTTTTGAACACATTTGGAG 58.561 40.000 0.00 0.00 0.00 3.86
2503 14721 5.300792 GGGAGTAGTTTTGAACACATTTGGA 59.699 40.000 0.00 0.00 0.00 3.53
2504 14722 5.301805 AGGGAGTAGTTTTGAACACATTTGG 59.698 40.000 0.00 0.00 0.00 3.28
2505 14723 6.391227 AGGGAGTAGTTTTGAACACATTTG 57.609 37.500 0.00 0.00 0.00 2.32
2506 14724 5.535030 GGAGGGAGTAGTTTTGAACACATTT 59.465 40.000 0.00 0.00 0.00 2.32
2507 14725 5.070685 GGAGGGAGTAGTTTTGAACACATT 58.929 41.667 0.00 0.00 0.00 2.71
2508 14726 4.652822 GGAGGGAGTAGTTTTGAACACAT 58.347 43.478 0.00 0.00 0.00 3.21
2509 14727 3.493699 CGGAGGGAGTAGTTTTGAACACA 60.494 47.826 0.00 0.00 0.00 3.72
2510 14728 3.064931 CGGAGGGAGTAGTTTTGAACAC 58.935 50.000 0.00 0.00 0.00 3.32
2511 14729 2.701951 ACGGAGGGAGTAGTTTTGAACA 59.298 45.455 0.00 0.00 0.00 3.18
2512 14730 3.006644 AGACGGAGGGAGTAGTTTTGAAC 59.993 47.826 0.00 0.00 0.00 3.18
2513 14731 3.236896 AGACGGAGGGAGTAGTTTTGAA 58.763 45.455 0.00 0.00 0.00 2.69
2514 14732 2.824341 GAGACGGAGGGAGTAGTTTTGA 59.176 50.000 0.00 0.00 0.00 2.69
2515 14733 2.415625 CGAGACGGAGGGAGTAGTTTTG 60.416 54.545 0.00 0.00 0.00 2.44
2516 14734 1.817447 CGAGACGGAGGGAGTAGTTTT 59.183 52.381 0.00 0.00 0.00 2.43
2517 14735 1.004044 TCGAGACGGAGGGAGTAGTTT 59.996 52.381 0.00 0.00 0.00 2.66
2518 14736 0.617413 TCGAGACGGAGGGAGTAGTT 59.383 55.000 0.00 0.00 0.00 2.24
2519 14737 0.178533 CTCGAGACGGAGGGAGTAGT 59.821 60.000 6.58 0.00 0.00 2.73
2520 14738 0.464870 TCTCGAGACGGAGGGAGTAG 59.535 60.000 12.08 0.00 34.74 2.57
2521 14739 1.129917 ATCTCGAGACGGAGGGAGTA 58.870 55.000 19.30 0.00 34.74 2.59
2522 14740 0.464735 CATCTCGAGACGGAGGGAGT 60.465 60.000 19.30 0.00 34.74 3.85
2523 14741 1.169661 CCATCTCGAGACGGAGGGAG 61.170 65.000 22.93 2.76 35.69 4.30
2524 14742 1.152943 CCATCTCGAGACGGAGGGA 60.153 63.158 22.93 0.00 35.69 4.20
2525 14743 2.851071 GCCATCTCGAGACGGAGGG 61.851 68.421 30.69 19.97 36.60 4.30
2526 14744 2.069465 CTGCCATCTCGAGACGGAGG 62.069 65.000 30.69 22.51 34.74 4.30
2527 14745 1.358402 CTGCCATCTCGAGACGGAG 59.642 63.158 30.69 22.15 35.32 4.63
2528 14746 0.965866 AACTGCCATCTCGAGACGGA 60.966 55.000 30.69 17.24 26.45 4.69
2529 14747 0.108615 AAACTGCCATCTCGAGACGG 60.109 55.000 23.01 23.01 0.00 4.79
2530 14748 1.656095 GAAAACTGCCATCTCGAGACG 59.344 52.381 19.30 9.96 0.00 4.18
2531 14749 2.003301 GGAAAACTGCCATCTCGAGAC 58.997 52.381 19.30 5.87 0.00 3.36
2532 14750 1.066143 GGGAAAACTGCCATCTCGAGA 60.066 52.381 19.19 19.19 0.00 4.04
2533 14751 1.373570 GGGAAAACTGCCATCTCGAG 58.626 55.000 5.93 5.93 0.00 4.04
2534 14752 0.035439 GGGGAAAACTGCCATCTCGA 60.035 55.000 0.00 0.00 0.00 4.04
2535 14753 1.369091 CGGGGAAAACTGCCATCTCG 61.369 60.000 0.00 0.00 0.00 4.04
2536 14754 0.322546 ACGGGGAAAACTGCCATCTC 60.323 55.000 0.00 0.00 0.00 2.75
2537 14755 0.609131 CACGGGGAAAACTGCCATCT 60.609 55.000 0.00 0.00 0.00 2.90
2538 14756 1.595093 CCACGGGGAAAACTGCCATC 61.595 60.000 0.00 0.00 35.59 3.51
2539 14757 1.606313 CCACGGGGAAAACTGCCAT 60.606 57.895 0.00 0.00 35.59 4.40
2540 14758 2.203422 CCACGGGGAAAACTGCCA 60.203 61.111 0.00 0.00 35.59 4.92
2541 14759 1.971695 CTCCACGGGGAAAACTGCC 60.972 63.158 8.34 0.00 44.38 4.85
2542 14760 1.971695 CCTCCACGGGGAAAACTGC 60.972 63.158 8.34 0.00 44.38 4.40
2543 14761 1.971695 GCCTCCACGGGGAAAACTG 60.972 63.158 8.34 0.00 44.38 3.16
2544 14762 2.434774 GCCTCCACGGGGAAAACT 59.565 61.111 8.34 0.00 44.38 2.66
2564 14782 1.893062 GGTATATCCCCGCGGGTAC 59.107 63.158 40.52 32.74 44.74 3.34
2565 14783 4.440145 GGTATATCCCCGCGGGTA 57.560 61.111 40.52 29.44 44.74 3.69
2574 14792 3.227810 CGGTTCTTAGCGGGTATATCC 57.772 52.381 0.00 0.00 41.36 2.59
2583 14801 2.202703 CGTCCCCGGTTCTTAGCG 60.203 66.667 0.00 0.00 44.49 4.26
2593 14811 3.276642 AATTTGTCCCCCGTCCCCG 62.277 63.158 0.00 0.00 0.00 5.73
2594 14812 1.680989 CAATTTGTCCCCCGTCCCC 60.681 63.158 0.00 0.00 0.00 4.81
2595 14813 2.348104 GCAATTTGTCCCCCGTCCC 61.348 63.158 0.00 0.00 0.00 4.46
2596 14814 2.348104 GGCAATTTGTCCCCCGTCC 61.348 63.158 0.00 0.00 0.00 4.79
2597 14815 1.304134 AGGCAATTTGTCCCCCGTC 60.304 57.895 0.00 0.00 0.00 4.79
2598 14816 1.304134 GAGGCAATTTGTCCCCCGT 60.304 57.895 0.00 0.00 0.00 5.28
2599 14817 2.052104 GGAGGCAATTTGTCCCCCG 61.052 63.158 0.00 0.00 0.00 5.73
2600 14818 0.325577 ATGGAGGCAATTTGTCCCCC 60.326 55.000 0.00 1.53 0.00 5.40
2601 14819 0.826062 CATGGAGGCAATTTGTCCCC 59.174 55.000 0.00 0.00 0.00 4.81
2602 14820 0.826062 CCATGGAGGCAATTTGTCCC 59.174 55.000 5.56 0.00 0.00 4.46
2603 14821 0.826062 CCCATGGAGGCAATTTGTCC 59.174 55.000 15.22 0.00 35.39 4.02
2604 14822 1.851304 TCCCATGGAGGCAATTTGTC 58.149 50.000 15.22 0.00 35.39 3.18
2605 14823 2.323999 TTCCCATGGAGGCAATTTGT 57.676 45.000 15.22 0.00 35.39 2.83
2606 14824 3.537580 CAATTCCCATGGAGGCAATTTG 58.462 45.455 15.22 3.46 35.39 2.32
2607 14825 2.092807 GCAATTCCCATGGAGGCAATTT 60.093 45.455 15.22 0.00 35.39 1.82
2608 14826 1.487558 GCAATTCCCATGGAGGCAATT 59.512 47.619 15.22 8.98 35.39 2.32
2609 14827 1.125633 GCAATTCCCATGGAGGCAAT 58.874 50.000 15.22 2.84 35.39 3.56
2610 14828 0.041535 AGCAATTCCCATGGAGGCAA 59.958 50.000 15.22 0.21 35.39 4.52
2611 14829 0.041535 AAGCAATTCCCATGGAGGCA 59.958 50.000 15.22 0.00 35.39 4.75
2612 14830 0.462789 CAAGCAATTCCCATGGAGGC 59.537 55.000 15.22 9.05 35.39 4.70
2613 14831 1.117150 CCAAGCAATTCCCATGGAGG 58.883 55.000 15.22 0.00 32.82 4.30
2614 14832 0.462789 GCCAAGCAATTCCCATGGAG 59.537 55.000 15.22 3.25 32.82 3.86
2615 14833 1.321805 CGCCAAGCAATTCCCATGGA 61.322 55.000 15.22 0.00 32.82 3.41
2616 14834 1.142314 CGCCAAGCAATTCCCATGG 59.858 57.895 4.14 4.14 0.00 3.66
2617 14835 1.142314 CCGCCAAGCAATTCCCATG 59.858 57.895 0.00 0.00 0.00 3.66
2618 14836 2.059786 CCCGCCAAGCAATTCCCAT 61.060 57.895 0.00 0.00 0.00 4.00
2619 14837 2.143575 TACCCGCCAAGCAATTCCCA 62.144 55.000 0.00 0.00 0.00 4.37
2620 14838 1.379309 TACCCGCCAAGCAATTCCC 60.379 57.895 0.00 0.00 0.00 3.97
2621 14839 1.663379 GGTACCCGCCAAGCAATTCC 61.663 60.000 0.00 0.00 0.00 3.01
2622 14840 1.807226 GGTACCCGCCAAGCAATTC 59.193 57.895 0.00 0.00 0.00 2.17
2623 14841 4.012138 GGTACCCGCCAAGCAATT 57.988 55.556 0.00 0.00 0.00 2.32
2640 14858 1.736645 CGCCCCGTTATGCTATCGG 60.737 63.158 0.00 0.00 43.30 4.18
2641 14859 1.736645 CCGCCCCGTTATGCTATCG 60.737 63.158 0.00 0.00 0.00 2.92
2642 14860 1.375523 CCCGCCCCGTTATGCTATC 60.376 63.158 0.00 0.00 0.00 2.08
2643 14861 2.747686 CCCGCCCCGTTATGCTAT 59.252 61.111 0.00 0.00 0.00 2.97
2644 14862 3.552384 CCCCGCCCCGTTATGCTA 61.552 66.667 0.00 0.00 0.00 3.49
2646 14864 4.265056 ATCCCCGCCCCGTTATGC 62.265 66.667 0.00 0.00 0.00 3.14
2647 14865 2.281484 CATCCCCGCCCCGTTATG 60.281 66.667 0.00 0.00 0.00 1.90
2648 14866 3.566210 CCATCCCCGCCCCGTTAT 61.566 66.667 0.00 0.00 0.00 1.89
2656 14874 2.871795 AATTTGTCCCCCATCCCCGC 62.872 60.000 0.00 0.00 0.00 6.13
2657 14875 0.755327 GAATTTGTCCCCCATCCCCG 60.755 60.000 0.00 0.00 0.00 5.73
2658 14876 0.755327 CGAATTTGTCCCCCATCCCC 60.755 60.000 0.00 0.00 0.00 4.81
2659 14877 1.391933 GCGAATTTGTCCCCCATCCC 61.392 60.000 0.00 0.00 0.00 3.85
2660 14878 1.391933 GGCGAATTTGTCCCCCATCC 61.392 60.000 0.00 0.00 0.00 3.51
2661 14879 1.391933 GGGCGAATTTGTCCCCCATC 61.392 60.000 4.83 0.00 43.24 3.51
2662 14880 1.381191 GGGCGAATTTGTCCCCCAT 60.381 57.895 4.83 0.00 43.24 4.00
2663 14881 2.036572 GGGCGAATTTGTCCCCCA 59.963 61.111 4.83 0.00 43.24 4.96
2667 14885 2.696759 CCACGGGGCGAATTTGTCC 61.697 63.158 7.91 7.91 0.00 4.02
2668 14886 1.644786 CTCCACGGGGCGAATTTGTC 61.645 60.000 0.00 0.00 0.00 3.18
2669 14887 1.674322 CTCCACGGGGCGAATTTGT 60.674 57.895 0.00 0.00 0.00 2.83
2670 14888 3.051392 GCTCCACGGGGCGAATTTG 62.051 63.158 0.00 0.00 0.00 2.32
2671 14889 2.750237 GCTCCACGGGGCGAATTT 60.750 61.111 0.00 0.00 0.00 1.82
2672 14890 4.796495 GGCTCCACGGGGCGAATT 62.796 66.667 0.00 0.00 0.00 2.17
2684 14902 1.831652 CGGGTATCCATGGAGGCTCC 61.832 65.000 26.95 26.95 37.29 4.70
2685 14903 1.674057 CGGGTATCCATGGAGGCTC 59.326 63.158 21.33 13.79 37.29 4.70
2686 14904 2.520536 GCGGGTATCCATGGAGGCT 61.521 63.158 21.33 6.04 37.29 4.58
2687 14905 2.032681 GCGGGTATCCATGGAGGC 59.967 66.667 21.33 14.54 37.29 4.70
2688 14906 1.705002 TTGGCGGGTATCCATGGAGG 61.705 60.000 21.33 7.77 39.47 4.30
2689 14907 0.535102 GTTGGCGGGTATCCATGGAG 60.535 60.000 21.33 7.10 32.92 3.86
2690 14908 1.275421 TGTTGGCGGGTATCCATGGA 61.275 55.000 18.88 18.88 32.92 3.41
2691 14909 0.395036 TTGTTGGCGGGTATCCATGG 60.395 55.000 4.97 4.97 32.92 3.66
2692 14910 0.738389 GTTGTTGGCGGGTATCCATG 59.262 55.000 0.00 0.00 32.92 3.66
2693 14911 0.623723 AGTTGTTGGCGGGTATCCAT 59.376 50.000 0.00 0.00 32.92 3.41
2694 14912 0.322098 CAGTTGTTGGCGGGTATCCA 60.322 55.000 0.00 0.00 0.00 3.41
2695 14913 0.035820 TCAGTTGTTGGCGGGTATCC 60.036 55.000 0.00 0.00 0.00 2.59
2696 14914 1.084289 GTCAGTTGTTGGCGGGTATC 58.916 55.000 0.00 0.00 0.00 2.24
2697 14915 0.398696 TGTCAGTTGTTGGCGGGTAT 59.601 50.000 0.00 0.00 32.72 2.73
2698 14916 0.398696 ATGTCAGTTGTTGGCGGGTA 59.601 50.000 0.00 0.00 32.72 3.69
2699 14917 1.150536 ATGTCAGTTGTTGGCGGGT 59.849 52.632 0.00 0.00 32.72 5.28
2700 14918 1.172180 ACATGTCAGTTGTTGGCGGG 61.172 55.000 0.00 0.00 32.72 6.13
2701 14919 0.040157 CACATGTCAGTTGTTGGCGG 60.040 55.000 0.00 0.00 32.72 6.13
2702 14920 0.040157 CCACATGTCAGTTGTTGGCG 60.040 55.000 0.00 0.00 32.72 5.69
2703 14921 0.314935 CCCACATGTCAGTTGTTGGC 59.685 55.000 0.00 0.00 0.00 4.52
2704 14922 1.608590 GTCCCACATGTCAGTTGTTGG 59.391 52.381 0.00 0.00 32.54 3.77
2705 14923 1.608590 GGTCCCACATGTCAGTTGTTG 59.391 52.381 0.00 0.00 0.00 3.33
2706 14924 1.494721 AGGTCCCACATGTCAGTTGTT 59.505 47.619 0.00 0.00 0.00 2.83
2707 14925 1.072331 GAGGTCCCACATGTCAGTTGT 59.928 52.381 0.00 0.00 0.00 3.32
2708 14926 1.611673 GGAGGTCCCACATGTCAGTTG 60.612 57.143 0.00 0.00 34.14 3.16
2709 14927 0.693049 GGAGGTCCCACATGTCAGTT 59.307 55.000 0.00 0.00 34.14 3.16
2710 14928 0.178891 AGGAGGTCCCACATGTCAGT 60.179 55.000 0.00 0.00 37.41 3.41
2711 14929 0.987294 AAGGAGGTCCCACATGTCAG 59.013 55.000 0.00 0.00 37.41 3.51
2712 14930 0.984230 GAAGGAGGTCCCACATGTCA 59.016 55.000 0.00 0.00 37.41 3.58
2713 14931 0.253327 GGAAGGAGGTCCCACATGTC 59.747 60.000 0.00 0.00 37.41 3.06
2714 14932 0.475632 TGGAAGGAGGTCCCACATGT 60.476 55.000 0.00 0.00 36.80 3.21
2715 14933 0.698238 TTGGAAGGAGGTCCCACATG 59.302 55.000 0.00 0.00 36.80 3.21
2716 14934 1.455822 TTTGGAAGGAGGTCCCACAT 58.544 50.000 0.00 0.00 36.80 3.21
2717 14935 1.455822 ATTTGGAAGGAGGTCCCACA 58.544 50.000 0.00 0.00 36.80 4.17
2718 14936 2.576648 ACTATTTGGAAGGAGGTCCCAC 59.423 50.000 0.00 0.00 36.80 4.61
2719 14937 2.929301 ACTATTTGGAAGGAGGTCCCA 58.071 47.619 0.00 0.00 36.80 4.37
2720 14938 3.391626 CCTACTATTTGGAAGGAGGTCCC 59.608 52.174 0.00 0.00 39.88 4.46
2721 14939 3.181453 GCCTACTATTTGGAAGGAGGTCC 60.181 52.174 3.39 0.00 45.68 4.46
2722 14940 3.181453 GGCCTACTATTTGGAAGGAGGTC 60.181 52.174 0.00 0.00 45.68 3.85
2723 14941 2.778270 GGCCTACTATTTGGAAGGAGGT 59.222 50.000 0.00 0.00 45.68 3.85
2724 14942 2.777692 TGGCCTACTATTTGGAAGGAGG 59.222 50.000 3.32 0.00 46.55 4.30
2725 14943 4.200092 GTTGGCCTACTATTTGGAAGGAG 58.800 47.826 10.33 0.00 0.00 3.69
2726 14944 3.053917 GGTTGGCCTACTATTTGGAAGGA 60.054 47.826 17.03 0.00 0.00 3.36
2727 14945 3.053619 AGGTTGGCCTACTATTTGGAAGG 60.054 47.826 17.03 0.00 44.90 3.46
2728 14946 4.236527 AGGTTGGCCTACTATTTGGAAG 57.763 45.455 17.03 0.00 44.90 3.46
2729 14947 4.384868 GCTAGGTTGGCCTACTATTTGGAA 60.385 45.833 17.03 0.00 44.90 3.53
2730 14948 3.135895 GCTAGGTTGGCCTACTATTTGGA 59.864 47.826 17.03 0.00 44.90 3.53
2731 14949 3.118038 TGCTAGGTTGGCCTACTATTTGG 60.118 47.826 17.03 4.43 44.90 3.28
2732 14950 4.130118 CTGCTAGGTTGGCCTACTATTTG 58.870 47.826 17.03 5.87 44.90 2.32
2733 14951 3.433740 GCTGCTAGGTTGGCCTACTATTT 60.434 47.826 17.03 3.79 44.90 1.40
2734 14952 2.104963 GCTGCTAGGTTGGCCTACTATT 59.895 50.000 17.03 6.10 44.90 1.73
2735 14953 1.694696 GCTGCTAGGTTGGCCTACTAT 59.305 52.381 17.03 8.78 44.90 2.12
2736 14954 1.120530 GCTGCTAGGTTGGCCTACTA 58.879 55.000 17.03 9.05 44.90 1.82
2737 14955 0.909610 TGCTGCTAGGTTGGCCTACT 60.910 55.000 17.03 8.35 44.90 2.57
2738 14956 0.462759 CTGCTGCTAGGTTGGCCTAC 60.463 60.000 9.03 9.03 44.90 3.18
2739 14957 0.909610 ACTGCTGCTAGGTTGGCCTA 60.910 55.000 3.32 0.00 44.90 3.93
2741 14959 1.746991 GACTGCTGCTAGGTTGGCC 60.747 63.158 0.00 0.00 0.00 5.36
2742 14960 1.003355 TGACTGCTGCTAGGTTGGC 60.003 57.895 0.00 0.00 0.00 4.52
2743 14961 1.023513 GCTGACTGCTGCTAGGTTGG 61.024 60.000 0.00 0.00 38.95 3.77
2744 14962 1.023513 GGCTGACTGCTGCTAGGTTG 61.024 60.000 0.00 0.00 42.39 3.77
2745 14963 1.298014 GGCTGACTGCTGCTAGGTT 59.702 57.895 0.00 0.00 42.39 3.50
2746 14964 1.270414 ATGGCTGACTGCTGCTAGGT 61.270 55.000 0.00 0.00 42.39 3.08
2747 14965 0.107312 AATGGCTGACTGCTGCTAGG 60.107 55.000 0.00 0.00 42.39 3.02
2748 14966 1.297664 GAATGGCTGACTGCTGCTAG 58.702 55.000 0.00 0.00 42.39 3.42
2749 14967 0.614812 TGAATGGCTGACTGCTGCTA 59.385 50.000 0.00 0.00 42.39 3.49
2750 14968 0.677098 CTGAATGGCTGACTGCTGCT 60.677 55.000 0.00 0.00 42.39 4.24
2751 14969 1.801332 CTGAATGGCTGACTGCTGC 59.199 57.895 4.20 0.00 42.39 5.25
2752 14970 1.654954 GGCTGAATGGCTGACTGCTG 61.655 60.000 4.20 0.00 42.39 4.41
2753 14971 1.378250 GGCTGAATGGCTGACTGCT 60.378 57.895 4.20 0.00 42.39 4.24
2754 14972 1.676635 TGGCTGAATGGCTGACTGC 60.677 57.895 0.00 0.00 42.34 4.40
2755 14973 1.642037 CGTGGCTGAATGGCTGACTG 61.642 60.000 0.00 0.00 42.34 3.51
2756 14974 1.376424 CGTGGCTGAATGGCTGACT 60.376 57.895 0.00 0.00 42.34 3.41
2757 14975 2.401766 CCGTGGCTGAATGGCTGAC 61.402 63.158 0.00 0.00 42.34 3.51
2758 14976 2.046023 CCGTGGCTGAATGGCTGA 60.046 61.111 0.00 0.00 42.34 4.26
2759 14977 3.818787 GCCGTGGCTGAATGGCTG 61.819 66.667 2.98 0.00 46.89 4.85
2762 14980 4.738998 TGGGCCGTGGCTGAATGG 62.739 66.667 11.25 0.00 41.60 3.16
2763 14981 2.676121 TTGGGCCGTGGCTGAATG 60.676 61.111 11.25 0.00 41.60 2.67
2764 14982 2.361610 CTTGGGCCGTGGCTGAAT 60.362 61.111 11.25 0.00 41.60 2.57
2765 14983 3.565214 TCTTGGGCCGTGGCTGAA 61.565 61.111 11.25 3.13 41.60 3.02
2766 14984 4.329545 GTCTTGGGCCGTGGCTGA 62.330 66.667 11.25 2.00 41.60 4.26
2774 14992 4.344865 TTGGGCTCGTCTTGGGCC 62.345 66.667 0.00 0.00 46.56 5.80
2775 14993 3.056328 GTTGGGCTCGTCTTGGGC 61.056 66.667 0.00 0.00 0.00 5.36
2776 14994 1.966451 GTGTTGGGCTCGTCTTGGG 60.966 63.158 0.00 0.00 0.00 4.12
2777 14995 1.227823 TGTGTTGGGCTCGTCTTGG 60.228 57.895 0.00 0.00 0.00 3.61
2778 14996 0.532862 AGTGTGTTGGGCTCGTCTTG 60.533 55.000 0.00 0.00 0.00 3.02
2779 14997 0.180406 AAGTGTGTTGGGCTCGTCTT 59.820 50.000 0.00 0.00 0.00 3.01
2780 14998 0.532862 CAAGTGTGTTGGGCTCGTCT 60.533 55.000 0.00 0.00 0.00 4.18
2781 14999 1.507141 CCAAGTGTGTTGGGCTCGTC 61.507 60.000 0.00 0.00 35.96 4.20
2782 15000 1.525995 CCAAGTGTGTTGGGCTCGT 60.526 57.895 0.00 0.00 35.96 4.18
2783 15001 2.908073 GCCAAGTGTGTTGGGCTCG 61.908 63.158 5.94 0.00 43.09 5.03
2784 15002 3.042560 GCCAAGTGTGTTGGGCTC 58.957 61.111 5.94 0.00 43.09 4.70
2787 15005 0.958822 GTTAGGCCAAGTGTGTTGGG 59.041 55.000 5.01 0.00 39.90 4.12
2788 15006 0.958822 GGTTAGGCCAAGTGTGTTGG 59.041 55.000 5.01 0.00 42.37 3.77
2789 15007 1.981256 AGGTTAGGCCAAGTGTGTTG 58.019 50.000 5.01 0.00 40.61 3.33
2790 15008 3.137728 AGTTAGGTTAGGCCAAGTGTGTT 59.862 43.478 5.01 0.00 40.61 3.32
2791 15009 2.709397 AGTTAGGTTAGGCCAAGTGTGT 59.291 45.455 5.01 0.00 40.61 3.72
2792 15010 3.418684 AGTTAGGTTAGGCCAAGTGTG 57.581 47.619 5.01 0.00 40.61 3.82
2793 15011 4.348754 TGTTAGTTAGGTTAGGCCAAGTGT 59.651 41.667 5.01 0.00 40.61 3.55
2794 15012 4.901868 TGTTAGTTAGGTTAGGCCAAGTG 58.098 43.478 5.01 0.00 40.61 3.16
2795 15013 5.497474 CATGTTAGTTAGGTTAGGCCAAGT 58.503 41.667 5.01 0.00 40.61 3.16
2796 15014 4.335594 GCATGTTAGTTAGGTTAGGCCAAG 59.664 45.833 5.01 0.00 40.61 3.61
2797 15015 4.263550 TGCATGTTAGTTAGGTTAGGCCAA 60.264 41.667 5.01 0.00 40.61 4.52
2798 15016 3.264706 TGCATGTTAGTTAGGTTAGGCCA 59.735 43.478 5.01 0.00 40.61 5.36
2799 15017 3.626217 GTGCATGTTAGTTAGGTTAGGCC 59.374 47.826 0.00 0.00 37.58 5.19
2800 15018 3.308866 CGTGCATGTTAGTTAGGTTAGGC 59.691 47.826 0.00 0.00 0.00 3.93
2801 15019 3.869246 CCGTGCATGTTAGTTAGGTTAGG 59.131 47.826 4.96 0.00 0.00 2.69
2802 15020 4.565564 GTCCGTGCATGTTAGTTAGGTTAG 59.434 45.833 4.96 0.00 0.00 2.34
2803 15021 4.497300 GTCCGTGCATGTTAGTTAGGTTA 58.503 43.478 4.96 0.00 0.00 2.85
2804 15022 3.332034 GTCCGTGCATGTTAGTTAGGTT 58.668 45.455 4.96 0.00 0.00 3.50
2805 15023 2.673043 CGTCCGTGCATGTTAGTTAGGT 60.673 50.000 4.96 0.00 0.00 3.08
2806 15024 1.924524 CGTCCGTGCATGTTAGTTAGG 59.075 52.381 4.96 0.00 0.00 2.69
2807 15025 1.323534 GCGTCCGTGCATGTTAGTTAG 59.676 52.381 4.96 0.00 34.15 2.34
2808 15026 1.336980 TGCGTCCGTGCATGTTAGTTA 60.337 47.619 4.96 0.00 40.62 2.24
2809 15027 0.601576 TGCGTCCGTGCATGTTAGTT 60.602 50.000 4.96 0.00 40.62 2.24
2810 15028 1.005512 TGCGTCCGTGCATGTTAGT 60.006 52.632 4.96 0.00 40.62 2.24
2811 15029 3.869187 TGCGTCCGTGCATGTTAG 58.131 55.556 4.96 0.00 40.62 2.34
2819 15037 4.742201 CTCCTGGGTGCGTCCGTG 62.742 72.222 0.00 0.00 37.00 4.94
2826 15044 4.284550 TGTTGGGCTCCTGGGTGC 62.285 66.667 5.24 5.24 0.00 5.01
2827 15045 2.282462 GTGTTGGGCTCCTGGGTG 60.282 66.667 0.00 0.00 0.00 4.61
2828 15046 2.776526 TGTGTTGGGCTCCTGGGT 60.777 61.111 0.00 0.00 0.00 4.51
2829 15047 2.282462 GTGTGTTGGGCTCCTGGG 60.282 66.667 0.00 0.00 0.00 4.45
2830 15048 2.669569 CGTGTGTTGGGCTCCTGG 60.670 66.667 0.00 0.00 0.00 4.45
2831 15049 3.357079 GCGTGTGTTGGGCTCCTG 61.357 66.667 0.00 0.00 0.00 3.86
2832 15050 4.988598 CGCGTGTGTTGGGCTCCT 62.989 66.667 0.00 0.00 0.00 3.69
2833 15051 4.980805 TCGCGTGTGTTGGGCTCC 62.981 66.667 5.77 0.00 0.00 4.70
2834 15052 3.712881 GTCGCGTGTGTTGGGCTC 61.713 66.667 5.77 0.00 0.00 4.70
2837 15055 4.619227 AGGGTCGCGTGTGTTGGG 62.619 66.667 5.77 0.00 0.00 4.12
2838 15056 3.041940 GAGGGTCGCGTGTGTTGG 61.042 66.667 5.77 0.00 0.00 3.77
2839 15057 3.041940 GGAGGGTCGCGTGTGTTG 61.042 66.667 5.77 0.00 0.00 3.33
2840 15058 3.222354 GAGGAGGGTCGCGTGTGTT 62.222 63.158 5.77 0.00 0.00 3.32
2841 15059 3.681835 GAGGAGGGTCGCGTGTGT 61.682 66.667 5.77 0.00 0.00 3.72
2842 15060 3.343788 GAGAGGAGGGTCGCGTGTG 62.344 68.421 5.77 0.00 0.00 3.82
2843 15061 3.063084 GAGAGGAGGGTCGCGTGT 61.063 66.667 5.77 0.00 0.00 4.49
2844 15062 4.180946 CGAGAGGAGGGTCGCGTG 62.181 72.222 5.77 0.00 35.32 5.34
2848 15066 3.578272 CGAGCGAGAGGAGGGTCG 61.578 72.222 0.00 0.00 45.79 4.79
2849 15067 3.894947 GCGAGCGAGAGGAGGGTC 61.895 72.222 0.00 0.00 0.00 4.46
2850 15068 4.434354 AGCGAGCGAGAGGAGGGT 62.434 66.667 0.00 0.00 0.00 4.34
2851 15069 3.591835 GAGCGAGCGAGAGGAGGG 61.592 72.222 0.00 0.00 0.00 4.30
2852 15070 3.591835 GGAGCGAGCGAGAGGAGG 61.592 72.222 0.00 0.00 0.00 4.30
2853 15071 2.515991 AGGAGCGAGCGAGAGGAG 60.516 66.667 0.00 0.00 0.00 3.69
2854 15072 2.515057 GAGGAGCGAGCGAGAGGA 60.515 66.667 0.00 0.00 0.00 3.71
2855 15073 2.058829 GAAGAGGAGCGAGCGAGAGG 62.059 65.000 0.00 0.00 0.00 3.69
2856 15074 1.355210 GAAGAGGAGCGAGCGAGAG 59.645 63.158 0.00 0.00 0.00 3.20
2857 15075 2.115911 GGAAGAGGAGCGAGCGAGA 61.116 63.158 0.00 0.00 0.00 4.04
2858 15076 2.058829 GAGGAAGAGGAGCGAGCGAG 62.059 65.000 0.00 0.00 0.00 5.03
2859 15077 2.044848 AGGAAGAGGAGCGAGCGA 60.045 61.111 0.00 0.00 0.00 4.93
2860 15078 2.410687 TGAGGAAGAGGAGCGAGCG 61.411 63.158 0.00 0.00 0.00 5.03
2861 15079 1.140804 GTGAGGAAGAGGAGCGAGC 59.859 63.158 0.00 0.00 0.00 5.03
2862 15080 0.455410 CTGTGAGGAAGAGGAGCGAG 59.545 60.000 0.00 0.00 0.00 5.03
2863 15081 1.599606 GCTGTGAGGAAGAGGAGCGA 61.600 60.000 0.00 0.00 0.00 4.93
2864 15082 1.153667 GCTGTGAGGAAGAGGAGCG 60.154 63.158 0.00 0.00 0.00 5.03
2865 15083 1.153667 CGCTGTGAGGAAGAGGAGC 60.154 63.158 0.00 0.00 0.00 4.70
2866 15084 1.153667 GCGCTGTGAGGAAGAGGAG 60.154 63.158 0.00 0.00 0.00 3.69
2867 15085 1.881903 CTGCGCTGTGAGGAAGAGGA 61.882 60.000 9.73 0.00 0.00 3.71
2868 15086 1.447489 CTGCGCTGTGAGGAAGAGG 60.447 63.158 9.73 0.00 0.00 3.69
2869 15087 2.099431 GCTGCGCTGTGAGGAAGAG 61.099 63.158 16.05 0.00 0.00 2.85
2870 15088 2.047844 GCTGCGCTGTGAGGAAGA 60.048 61.111 16.05 0.00 0.00 2.87
2871 15089 3.123620 GGCTGCGCTGTGAGGAAG 61.124 66.667 16.05 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.