Multiple sequence alignment - TraesCS5B01G435600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G435600 chr5B 100.000 2519 0 0 1 2519 609936753 609934235 0.000000e+00 4652
1 TraesCS5B01G435600 chr5B 80.881 795 108 25 744 1509 609928124 609927345 1.000000e-163 586
2 TraesCS5B01G435600 chr5B 83.985 537 57 10 980 1503 609848658 609848138 2.910000e-134 488
3 TraesCS5B01G435600 chr5B 90.274 329 29 1 1014 1339 610007740 610007412 6.440000e-116 427
4 TraesCS5B01G435600 chr5B 98.742 159 1 1 1350 1508 609600270 609600113 5.310000e-72 281
5 TraesCS5B01G435600 chr5A 92.608 1637 81 14 122 1739 616920782 616919167 0.000000e+00 2316
6 TraesCS5B01G435600 chr5A 87.293 1330 104 42 736 2008 616914851 616913530 0.000000e+00 1459
7 TraesCS5B01G435600 chr5A 90.050 794 59 10 1733 2519 616918982 616918202 0.000000e+00 1011
8 TraesCS5B01G435600 chr5A 85.820 811 70 30 736 1509 616910088 616909286 0.000000e+00 819
9 TraesCS5B01G435600 chr5A 82.587 804 93 28 744 1507 616880853 616880057 0.000000e+00 665
10 TraesCS5B01G435600 chr5D 95.877 1043 35 5 593 1627 494052423 494053465 0.000000e+00 1681
11 TraesCS5B01G435600 chr5D 89.510 429 29 10 122 536 494049079 494049505 1.720000e-146 529
12 TraesCS5B01G435600 chr5D 90.881 329 27 1 1014 1339 494042017 494042345 2.970000e-119 438
13 TraesCS5B01G435600 chr5D 92.177 294 23 0 1216 1509 493835327 493835034 1.390000e-112 416
14 TraesCS5B01G435600 chr5D 89.362 329 32 1 1014 1339 494033289 494033617 6.490000e-111 411
15 TraesCS5B01G435600 chr5D 91.406 256 16 4 1655 1904 494053462 494053717 1.850000e-91 346
16 TraesCS5B01G435600 chr5D 95.349 129 5 1 1 129 387621437 387621310 1.180000e-48 204
17 TraesCS5B01G435600 chr5D 95.276 127 6 0 1 127 241844202 241844076 4.250000e-48 202
18 TraesCS5B01G435600 chr2D 96.000 125 5 0 1 125 300887441 300887317 1.180000e-48 204
19 TraesCS5B01G435600 chr7A 95.276 127 6 0 1 127 15493828 15493954 4.250000e-48 202
20 TraesCS5B01G435600 chr4D 95.238 126 6 0 1 126 36413237 36413362 1.530000e-47 200
21 TraesCS5B01G435600 chr3D 95.935 123 5 0 3 125 323763307 323763185 1.530000e-47 200
22 TraesCS5B01G435600 chr3D 93.233 133 8 1 1 133 496172758 496172889 7.110000e-46 195
23 TraesCS5B01G435600 chr3B 95.238 126 6 0 1 126 355437319 355437444 1.530000e-47 200
24 TraesCS5B01G435600 chr2B 95.238 126 6 0 1 126 199013850 199013725 1.530000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G435600 chr5B 609934235 609936753 2518 True 4652.00 4652 100.000000 1 2519 1 chr5B.!!$R4 2518
1 TraesCS5B01G435600 chr5B 609927345 609928124 779 True 586.00 586 80.881000 744 1509 1 chr5B.!!$R3 765
2 TraesCS5B01G435600 chr5B 609848138 609848658 520 True 488.00 488 83.985000 980 1503 1 chr5B.!!$R2 523
3 TraesCS5B01G435600 chr5A 616909286 616920782 11496 True 1401.25 2316 88.942750 122 2519 4 chr5A.!!$R2 2397
4 TraesCS5B01G435600 chr5A 616880057 616880853 796 True 665.00 665 82.587000 744 1507 1 chr5A.!!$R1 763
5 TraesCS5B01G435600 chr5D 494049079 494053717 4638 False 852.00 1681 92.264333 122 1904 3 chr5D.!!$F3 1782

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
793 3698 0.10412 TAGTGCACGACAACTGCAGT 59.896 50.0 15.25 15.25 45.22 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2342 10676 0.035725 TCGCGTCCTCTCTTCTACCA 60.036 55.0 5.77 0.0 0.0 3.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.978876 CTCCCTCCGTCCCAAAATT 57.021 52.632 0.00 0.00 0.00 1.82
19 20 1.751437 CTCCCTCCGTCCCAAAATTC 58.249 55.000 0.00 0.00 0.00 2.17
20 21 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
21 22 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
22 23 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
23 24 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
24 25 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
25 26 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
26 27 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
27 28 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
28 29 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
29 30 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
30 31 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
31 32 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
32 33 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
33 34 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
34 35 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
35 36 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
36 37 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
43 44 9.569167 TTCTTGTCTTAGATTTGTCTACATACG 57.431 33.333 0.00 0.00 0.00 3.06
44 45 8.953313 TCTTGTCTTAGATTTGTCTACATACGA 58.047 33.333 0.00 0.00 0.00 3.43
45 46 9.569167 CTTGTCTTAGATTTGTCTACATACGAA 57.431 33.333 0.00 0.00 0.00 3.85
47 48 9.516314 TGTCTTAGATTTGTCTACATACGAATG 57.484 33.333 0.00 0.00 34.30 2.67
112 113 9.546428 AAACAAATCTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.04 4.12
113 114 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
114 115 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
115 116 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
116 117 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
117 118 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
118 119 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
119 120 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
120 121 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
199 201 3.482436 AGTAGGTTCCTAGAGATGCTCG 58.518 50.000 0.00 0.00 35.36 5.03
202 204 2.955660 AGGTTCCTAGAGATGCTCGAAG 59.044 50.000 0.00 0.00 35.36 3.79
275 277 9.982651 GTAGCAAGATAAATATCACAACCTCTA 57.017 33.333 3.45 0.00 35.17 2.43
305 307 7.504911 GTGTAGGGTAACTAGATAGTTCCATGA 59.495 40.741 8.48 0.00 44.77 3.07
329 331 5.977129 ACATCATGAAGTTCCGAAACAAAAC 59.023 36.000 0.00 0.00 37.88 2.43
330 332 4.927422 TCATGAAGTTCCGAAACAAAACC 58.073 39.130 0.00 0.00 37.88 3.27
344 346 7.336975 CGAAACAAAACCAAGCTTAAATTCTG 58.663 34.615 0.00 0.00 0.00 3.02
379 381 9.303537 GTCTCATAAGTCACCTTAAGTTGATAC 57.696 37.037 5.96 0.00 36.76 2.24
426 442 8.647796 ACCGTTCTATTGATATGAATAACCTCA 58.352 33.333 0.00 0.00 0.00 3.86
526 542 1.604947 CGCCATTGGTTGCATTTGTCA 60.605 47.619 4.26 0.00 0.00 3.58
529 545 3.731089 CCATTGGTTGCATTTGTCAAGT 58.269 40.909 0.00 0.00 0.00 3.16
536 552 3.797451 TGCATTTGTCAAGTGAGCAAA 57.203 38.095 11.93 9.76 36.68 3.68
546 3441 4.453478 GTCAAGTGAGCAAACATCAGATCA 59.547 41.667 0.00 0.00 0.00 2.92
559 3454 3.513680 TCAGATCAATTGGTTGCATGC 57.486 42.857 11.82 11.82 35.26 4.06
586 3481 5.938125 GGATAACAAAGCAAGTTACTGGAGA 59.062 40.000 0.00 0.00 34.59 3.71
587 3482 6.430000 GGATAACAAAGCAAGTTACTGGAGAA 59.570 38.462 0.00 0.00 34.59 2.87
588 3483 7.040686 GGATAACAAAGCAAGTTACTGGAGAAA 60.041 37.037 0.00 0.00 34.59 2.52
589 3484 6.524101 AACAAAGCAAGTTACTGGAGAAAA 57.476 33.333 0.00 0.00 0.00 2.29
590 3485 6.524101 ACAAAGCAAGTTACTGGAGAAAAA 57.476 33.333 0.00 0.00 0.00 1.94
650 3545 4.023193 ACAAGAGATAGCCAACAAAAACCG 60.023 41.667 0.00 0.00 0.00 4.44
725 3620 0.537371 CGGCCTGGTCCAACTTTCTT 60.537 55.000 0.00 0.00 0.00 2.52
734 3629 5.200483 TGGTCCAACTTTCTTTCTGAACAT 58.800 37.500 0.00 0.00 33.88 2.71
770 3672 6.914757 GCAGCCACATATCAAATACTTTTCTC 59.085 38.462 0.00 0.00 0.00 2.87
793 3698 0.104120 TAGTGCACGACAACTGCAGT 59.896 50.000 15.25 15.25 45.22 4.40
796 3701 0.934496 TGCACGACAACTGCAGTAAC 59.066 50.000 22.01 13.18 39.76 2.50
978 3911 2.168106 AGCATCTGTCTTCCACTAGCAG 59.832 50.000 0.00 0.00 0.00 4.24
1038 3974 1.015109 CAAGCAGCAGCAGTATCCTG 58.985 55.000 3.17 0.00 45.49 3.86
1549 9865 1.269831 CGCTAGCTGGATGGTAGTTCC 60.270 57.143 13.93 0.00 45.65 3.62
1566 9882 8.581578 TGGTAGTTCCAAAATGTATTTCTTTCC 58.418 33.333 0.00 0.00 44.12 3.13
1651 9971 3.330701 AGGGTGTTCTGTTCCACATATGT 59.669 43.478 1.41 1.41 33.19 2.29
1653 9973 5.191722 AGGGTGTTCTGTTCCACATATGTAT 59.808 40.000 8.32 0.00 33.19 2.29
1684 10008 4.073293 TGGTTGTCTTCTTTGAGTCTCC 57.927 45.455 0.00 0.00 0.00 3.71
1706 10030 6.751157 TCCGTATATGATCAACAACGGTAAT 58.249 36.000 29.61 5.06 45.22 1.89
1801 10134 7.709269 ATGATATTGTGATTGCAGCATTTTC 57.291 32.000 0.00 0.00 0.00 2.29
1811 10144 7.383300 GTGATTGCAGCATTTTCCCTATATTTC 59.617 37.037 0.00 0.00 0.00 2.17
1825 10158 7.047891 TCCCTATATTTCAGCAAACACACTAG 58.952 38.462 0.00 0.00 0.00 2.57
1829 10162 5.869753 ATTTCAGCAAACACACTAGCTAG 57.130 39.130 19.44 19.44 35.19 3.42
1839 10172 9.887406 GCAAACACACTAGCTAGTAAATTAAAA 57.113 29.630 25.63 0.00 34.13 1.52
1925 10259 3.000727 AGTTTTAGATCAACGGGAAGCG 58.999 45.455 0.00 0.00 0.00 4.68
1932 10266 1.153353 TCAACGGGAAGCGACATTTC 58.847 50.000 0.00 0.00 0.00 2.17
1934 10268 0.250553 AACGGGAAGCGACATTTCCA 60.251 50.000 6.38 0.00 44.77 3.53
1935 10269 0.035439 ACGGGAAGCGACATTTCCAT 60.035 50.000 6.38 0.00 44.77 3.41
1936 10270 1.208535 ACGGGAAGCGACATTTCCATA 59.791 47.619 6.38 0.00 44.77 2.74
1940 10274 4.152402 CGGGAAGCGACATTTCCATAATAG 59.848 45.833 6.38 0.00 44.77 1.73
1946 10280 8.677148 AAGCGACATTTCCATAATAGTATGTT 57.323 30.769 9.19 0.00 36.16 2.71
1947 10281 8.087982 AGCGACATTTCCATAATAGTATGTTG 57.912 34.615 9.19 0.00 36.16 3.33
1965 10299 5.856126 TGTTGTAAGCCTTTTCATAGTCG 57.144 39.130 0.00 0.00 0.00 4.18
2005 10339 4.214980 AGAATCAGTTTTGTGCACTTCG 57.785 40.909 19.41 0.80 0.00 3.79
2008 10342 1.400142 TCAGTTTTGTGCACTTCGTGG 59.600 47.619 19.41 4.15 33.64 4.94
2010 10344 0.736053 GTTTTGTGCACTTCGTGGGA 59.264 50.000 19.41 0.00 33.64 4.37
2011 10345 1.133407 GTTTTGTGCACTTCGTGGGAA 59.867 47.619 19.41 0.00 33.64 3.97
2020 10354 2.231215 CTTCGTGGGAAGCTCATAGG 57.769 55.000 0.00 0.00 42.90 2.57
2021 10355 0.178068 TTCGTGGGAAGCTCATAGGC 59.822 55.000 0.00 0.00 0.00 3.93
2022 10356 1.592669 CGTGGGAAGCTCATAGGCG 60.593 63.158 0.00 0.00 37.29 5.52
2023 10357 1.227674 GTGGGAAGCTCATAGGCGG 60.228 63.158 0.00 0.00 37.29 6.13
2024 10358 1.382557 TGGGAAGCTCATAGGCGGA 60.383 57.895 0.00 0.00 37.29 5.54
2025 10359 0.980754 TGGGAAGCTCATAGGCGGAA 60.981 55.000 0.00 0.00 37.29 4.30
2026 10360 0.180406 GGGAAGCTCATAGGCGGAAA 59.820 55.000 0.00 0.00 37.29 3.13
2027 10361 1.300481 GGAAGCTCATAGGCGGAAAC 58.700 55.000 0.00 0.00 37.29 2.78
2044 10378 5.555190 GGAAACGACACTTGTTATTTTGC 57.445 39.130 0.00 0.00 0.00 3.68
2045 10379 5.038033 GGAAACGACACTTGTTATTTTGCA 58.962 37.500 0.00 0.00 0.00 4.08
2046 10380 5.517054 GGAAACGACACTTGTTATTTTGCAA 59.483 36.000 0.00 0.00 0.00 4.08
2047 10381 5.942325 AACGACACTTGTTATTTTGCAAC 57.058 34.783 0.00 0.00 0.00 4.17
2048 10382 4.987832 ACGACACTTGTTATTTTGCAACA 58.012 34.783 0.00 0.00 34.18 3.33
2049 10383 5.403246 ACGACACTTGTTATTTTGCAACAA 58.597 33.333 0.00 0.00 42.12 2.83
2050 10384 6.039616 ACGACACTTGTTATTTTGCAACAAT 58.960 32.000 0.00 5.42 43.06 2.71
2051 10385 7.197017 ACGACACTTGTTATTTTGCAACAATA 58.803 30.769 0.00 4.42 43.06 1.90
2052 10386 7.702772 ACGACACTTGTTATTTTGCAACAATAA 59.297 29.630 16.24 16.24 43.06 1.40
2053 10387 8.535592 CGACACTTGTTATTTTGCAACAATAAA 58.464 29.630 19.34 5.88 43.06 1.40
2075 10409 6.998968 AAAAATGGCACTTGTTGAAATGAA 57.001 29.167 0.00 0.00 0.00 2.57
2076 10410 7.571080 AAAAATGGCACTTGTTGAAATGAAT 57.429 28.000 0.00 0.00 0.00 2.57
2077 10411 6.790285 AAATGGCACTTGTTGAAATGAATC 57.210 33.333 0.00 0.00 0.00 2.52
2078 10412 5.733620 ATGGCACTTGTTGAAATGAATCT 57.266 34.783 0.00 0.00 0.00 2.40
2079 10413 6.839124 ATGGCACTTGTTGAAATGAATCTA 57.161 33.333 0.00 0.00 0.00 1.98
2080 10414 6.012658 TGGCACTTGTTGAAATGAATCTAC 57.987 37.500 0.00 0.00 0.00 2.59
2081 10415 5.048083 TGGCACTTGTTGAAATGAATCTACC 60.048 40.000 0.00 0.00 0.00 3.18
2082 10416 5.402398 GCACTTGTTGAAATGAATCTACCC 58.598 41.667 0.00 0.00 0.00 3.69
2083 10417 5.622233 GCACTTGTTGAAATGAATCTACCCC 60.622 44.000 0.00 0.00 0.00 4.95
2084 10418 5.711976 CACTTGTTGAAATGAATCTACCCCT 59.288 40.000 0.00 0.00 0.00 4.79
2085 10419 6.884295 CACTTGTTGAAATGAATCTACCCCTA 59.116 38.462 0.00 0.00 0.00 3.53
2086 10420 7.393234 CACTTGTTGAAATGAATCTACCCCTAA 59.607 37.037 0.00 0.00 0.00 2.69
2087 10421 7.393515 ACTTGTTGAAATGAATCTACCCCTAAC 59.606 37.037 0.00 0.00 0.00 2.34
2088 10422 6.785076 TGTTGAAATGAATCTACCCCTAACA 58.215 36.000 0.00 0.00 0.00 2.41
2089 10423 7.235079 TGTTGAAATGAATCTACCCCTAACAA 58.765 34.615 0.00 0.00 0.00 2.83
2090 10424 7.726291 TGTTGAAATGAATCTACCCCTAACAAA 59.274 33.333 0.00 0.00 0.00 2.83
2091 10425 7.696992 TGAAATGAATCTACCCCTAACAAAC 57.303 36.000 0.00 0.00 0.00 2.93
2092 10426 7.235079 TGAAATGAATCTACCCCTAACAAACA 58.765 34.615 0.00 0.00 0.00 2.83
2093 10427 7.893302 TGAAATGAATCTACCCCTAACAAACAT 59.107 33.333 0.00 0.00 0.00 2.71
2094 10428 9.403583 GAAATGAATCTACCCCTAACAAACATA 57.596 33.333 0.00 0.00 0.00 2.29
2095 10429 8.980481 AATGAATCTACCCCTAACAAACATAG 57.020 34.615 0.00 0.00 0.00 2.23
2096 10430 7.504926 TGAATCTACCCCTAACAAACATAGT 57.495 36.000 0.00 0.00 0.00 2.12
2097 10431 7.924541 TGAATCTACCCCTAACAAACATAGTT 58.075 34.615 0.00 0.00 0.00 2.24
2098 10432 8.387813 TGAATCTACCCCTAACAAACATAGTTT 58.612 33.333 0.00 0.00 0.00 2.66
2099 10433 8.575649 AATCTACCCCTAACAAACATAGTTTG 57.424 34.615 18.12 18.12 35.64 2.93
2100 10434 6.478129 TCTACCCCTAACAAACATAGTTTGG 58.522 40.000 22.12 9.36 40.19 3.28
2101 10435 5.069518 ACCCCTAACAAACATAGTTTGGT 57.930 39.130 22.12 19.34 39.29 3.67
2102 10436 5.460416 ACCCCTAACAAACATAGTTTGGTT 58.540 37.500 22.12 16.38 39.29 3.67
2118 10452 2.979240 TGGTTGGAAAACAAAAGCACC 58.021 42.857 0.00 0.00 43.16 5.01
2119 10453 2.569404 TGGTTGGAAAACAAAAGCACCT 59.431 40.909 0.00 0.00 43.16 4.00
2120 10454 3.769844 TGGTTGGAAAACAAAAGCACCTA 59.230 39.130 0.00 0.00 43.16 3.08
2121 10455 4.116961 GGTTGGAAAACAAAAGCACCTAC 58.883 43.478 0.00 0.00 41.58 3.18
2122 10456 4.382147 GGTTGGAAAACAAAAGCACCTACA 60.382 41.667 0.00 0.00 41.58 2.74
2123 10457 5.172205 GTTGGAAAACAAAAGCACCTACAA 58.828 37.500 0.00 0.00 41.58 2.41
2124 10458 5.606348 TGGAAAACAAAAGCACCTACAAT 57.394 34.783 0.00 0.00 0.00 2.71
2125 10459 5.596845 TGGAAAACAAAAGCACCTACAATC 58.403 37.500 0.00 0.00 0.00 2.67
2126 10460 5.127845 TGGAAAACAAAAGCACCTACAATCA 59.872 36.000 0.00 0.00 0.00 2.57
2127 10461 6.045955 GGAAAACAAAAGCACCTACAATCAA 58.954 36.000 0.00 0.00 0.00 2.57
2128 10462 6.705825 GGAAAACAAAAGCACCTACAATCAAT 59.294 34.615 0.00 0.00 0.00 2.57
2129 10463 7.870445 GGAAAACAAAAGCACCTACAATCAATA 59.130 33.333 0.00 0.00 0.00 1.90
2130 10464 8.816640 AAAACAAAAGCACCTACAATCAATAG 57.183 30.769 0.00 0.00 0.00 1.73
2131 10465 6.515272 ACAAAAGCACCTACAATCAATAGG 57.485 37.500 0.00 0.00 44.29 2.57
2140 10474 6.949352 CCTACAATCAATAGGTGCAATCTT 57.051 37.500 0.00 0.00 35.40 2.40
2142 10476 8.627208 CCTACAATCAATAGGTGCAATCTTAT 57.373 34.615 0.00 0.00 35.40 1.73
2143 10477 9.071276 CCTACAATCAATAGGTGCAATCTTATT 57.929 33.333 0.00 0.00 35.40 1.40
2155 10489 9.646522 AGGTGCAATCTTATTAATCATAGGTTT 57.353 29.630 0.00 0.00 0.00 3.27
2156 10490 9.683069 GGTGCAATCTTATTAATCATAGGTTTG 57.317 33.333 0.00 0.00 31.63 2.93
2157 10491 9.683069 GTGCAATCTTATTAATCATAGGTTTGG 57.317 33.333 0.00 0.00 30.21 3.28
2158 10492 9.420118 TGCAATCTTATTAATCATAGGTTTGGT 57.580 29.630 0.00 0.00 30.21 3.67
2188 10522 9.674068 AAATCTTCAGATAAGAAGTCCCTAAAC 57.326 33.333 0.00 0.00 44.18 2.01
2189 10523 8.616799 ATCTTCAGATAAGAAGTCCCTAAACT 57.383 34.615 0.00 0.00 44.18 2.66
2190 10524 9.716556 ATCTTCAGATAAGAAGTCCCTAAACTA 57.283 33.333 0.00 0.00 44.18 2.24
2191 10525 9.543231 TCTTCAGATAAGAAGTCCCTAAACTAA 57.457 33.333 0.00 0.00 44.18 2.24
2194 10528 9.268282 TCAGATAAGAAGTCCCTAAACTAATGT 57.732 33.333 0.00 0.00 0.00 2.71
2195 10529 9.319143 CAGATAAGAAGTCCCTAAACTAATGTG 57.681 37.037 0.00 0.00 0.00 3.21
2196 10530 7.988028 AGATAAGAAGTCCCTAAACTAATGTGC 59.012 37.037 0.00 0.00 0.00 4.57
2197 10531 4.844884 AGAAGTCCCTAAACTAATGTGCC 58.155 43.478 0.00 0.00 0.00 5.01
2198 10532 3.646736 AGTCCCTAAACTAATGTGCCC 57.353 47.619 0.00 0.00 0.00 5.36
2199 10533 3.190439 AGTCCCTAAACTAATGTGCCCT 58.810 45.455 0.00 0.00 0.00 5.19
2200 10534 3.054361 AGTCCCTAAACTAATGTGCCCTG 60.054 47.826 0.00 0.00 0.00 4.45
2201 10535 3.054655 GTCCCTAAACTAATGTGCCCTGA 60.055 47.826 0.00 0.00 0.00 3.86
2202 10536 3.589735 TCCCTAAACTAATGTGCCCTGAA 59.410 43.478 0.00 0.00 0.00 3.02
2203 10537 3.694566 CCCTAAACTAATGTGCCCTGAAC 59.305 47.826 0.00 0.00 0.00 3.18
2204 10538 4.331968 CCTAAACTAATGTGCCCTGAACA 58.668 43.478 0.00 0.00 0.00 3.18
2205 10539 4.949856 CCTAAACTAATGTGCCCTGAACAT 59.050 41.667 0.00 0.00 39.95 2.71
2206 10540 5.066505 CCTAAACTAATGTGCCCTGAACATC 59.933 44.000 0.00 0.00 37.27 3.06
2207 10541 4.307032 AACTAATGTGCCCTGAACATCT 57.693 40.909 0.00 0.00 37.27 2.90
2208 10542 4.307032 ACTAATGTGCCCTGAACATCTT 57.693 40.909 0.00 0.00 37.27 2.40
2209 10543 4.265073 ACTAATGTGCCCTGAACATCTTC 58.735 43.478 0.00 0.00 37.27 2.87
2210 10544 2.885135 ATGTGCCCTGAACATCTTCA 57.115 45.000 0.00 0.00 32.83 3.02
2211 10545 2.885135 TGTGCCCTGAACATCTTCAT 57.115 45.000 0.00 0.00 35.78 2.57
2212 10546 3.998913 TGTGCCCTGAACATCTTCATA 57.001 42.857 0.00 0.00 35.78 2.15
2213 10547 3.877559 TGTGCCCTGAACATCTTCATAG 58.122 45.455 0.00 0.00 35.78 2.23
2214 10548 2.615912 GTGCCCTGAACATCTTCATAGC 59.384 50.000 0.08 0.08 35.78 2.97
2215 10549 2.239402 TGCCCTGAACATCTTCATAGCA 59.761 45.455 4.40 4.40 39.89 3.49
2216 10550 3.117776 TGCCCTGAACATCTTCATAGCAT 60.118 43.478 4.40 0.00 38.47 3.79
2217 10551 4.102996 TGCCCTGAACATCTTCATAGCATA 59.897 41.667 4.40 0.00 38.47 3.14
2218 10552 4.694509 GCCCTGAACATCTTCATAGCATAG 59.305 45.833 0.00 0.00 35.78 2.23
2219 10553 5.744300 GCCCTGAACATCTTCATAGCATAGT 60.744 44.000 0.00 0.00 35.78 2.12
2220 10554 6.294473 CCCTGAACATCTTCATAGCATAGTT 58.706 40.000 0.00 0.00 35.78 2.24
2221 10555 6.769822 CCCTGAACATCTTCATAGCATAGTTT 59.230 38.462 0.00 0.00 35.78 2.66
2222 10556 7.284034 CCCTGAACATCTTCATAGCATAGTTTT 59.716 37.037 0.00 0.00 35.78 2.43
2223 10557 8.341173 CCTGAACATCTTCATAGCATAGTTTTC 58.659 37.037 0.00 0.00 35.78 2.29
2224 10558 9.107177 CTGAACATCTTCATAGCATAGTTTTCT 57.893 33.333 0.00 0.00 35.78 2.52
2225 10559 9.453572 TGAACATCTTCATAGCATAGTTTTCTT 57.546 29.630 0.00 0.00 31.00 2.52
2228 10562 8.607459 ACATCTTCATAGCATAGTTTTCTTTCG 58.393 33.333 0.00 0.00 0.00 3.46
2229 10563 7.539712 TCTTCATAGCATAGTTTTCTTTCGG 57.460 36.000 0.00 0.00 0.00 4.30
2230 10564 7.327975 TCTTCATAGCATAGTTTTCTTTCGGA 58.672 34.615 0.00 0.00 0.00 4.55
2231 10565 7.822334 TCTTCATAGCATAGTTTTCTTTCGGAA 59.178 33.333 0.00 0.00 0.00 4.30
2232 10566 8.506168 TTCATAGCATAGTTTTCTTTCGGAAT 57.494 30.769 0.00 0.00 33.53 3.01
2233 10567 7.919690 TCATAGCATAGTTTTCTTTCGGAATG 58.080 34.615 0.00 0.00 33.53 2.67
2234 10568 7.768582 TCATAGCATAGTTTTCTTTCGGAATGA 59.231 33.333 2.49 2.49 33.53 2.57
2235 10569 6.428385 AGCATAGTTTTCTTTCGGAATGAG 57.572 37.500 6.45 0.00 33.53 2.90
2236 10570 5.940470 AGCATAGTTTTCTTTCGGAATGAGT 59.060 36.000 6.45 0.00 33.53 3.41
2237 10571 6.024049 GCATAGTTTTCTTTCGGAATGAGTG 58.976 40.000 6.45 3.23 33.53 3.51
2238 10572 6.348540 GCATAGTTTTCTTTCGGAATGAGTGT 60.349 38.462 6.45 0.00 33.53 3.55
2239 10573 5.424121 AGTTTTCTTTCGGAATGAGTGTG 57.576 39.130 6.45 0.00 33.53 3.82
2240 10574 5.123227 AGTTTTCTTTCGGAATGAGTGTGA 58.877 37.500 6.45 0.00 33.53 3.58
2241 10575 5.765182 AGTTTTCTTTCGGAATGAGTGTGAT 59.235 36.000 6.45 0.00 33.53 3.06
2242 10576 5.611796 TTTCTTTCGGAATGAGTGTGATG 57.388 39.130 6.45 0.00 33.53 3.07
2243 10577 4.535526 TCTTTCGGAATGAGTGTGATGA 57.464 40.909 2.49 0.00 0.00 2.92
2244 10578 5.089970 TCTTTCGGAATGAGTGTGATGAT 57.910 39.130 2.49 0.00 0.00 2.45
2245 10579 5.491070 TCTTTCGGAATGAGTGTGATGATT 58.509 37.500 2.49 0.00 0.00 2.57
2246 10580 6.639563 TCTTTCGGAATGAGTGTGATGATTA 58.360 36.000 2.49 0.00 0.00 1.75
2247 10581 6.535150 TCTTTCGGAATGAGTGTGATGATTAC 59.465 38.462 2.49 0.00 0.00 1.89
2248 10582 5.337578 TCGGAATGAGTGTGATGATTACA 57.662 39.130 0.00 0.00 0.00 2.41
2249 10583 5.729510 TCGGAATGAGTGTGATGATTACAA 58.270 37.500 0.00 0.00 0.00 2.41
2250 10584 6.169800 TCGGAATGAGTGTGATGATTACAAA 58.830 36.000 0.00 0.00 0.00 2.83
2251 10585 6.652900 TCGGAATGAGTGTGATGATTACAAAA 59.347 34.615 0.00 0.00 0.00 2.44
2252 10586 7.336679 TCGGAATGAGTGTGATGATTACAAAAT 59.663 33.333 0.00 0.00 0.00 1.82
2253 10587 7.970061 CGGAATGAGTGTGATGATTACAAAATT 59.030 33.333 0.00 0.00 0.00 1.82
2254 10588 9.294030 GGAATGAGTGTGATGATTACAAAATTC 57.706 33.333 10.08 10.08 0.00 2.17
2255 10589 9.844790 GAATGAGTGTGATGATTACAAAATTCA 57.155 29.630 12.14 6.73 31.07 2.57
2256 10590 9.850628 AATGAGTGTGATGATTACAAAATTCAG 57.149 29.630 0.00 0.00 0.00 3.02
2257 10591 8.394971 TGAGTGTGATGATTACAAAATTCAGT 57.605 30.769 0.00 0.00 0.00 3.41
2258 10592 8.849168 TGAGTGTGATGATTACAAAATTCAGTT 58.151 29.630 0.00 0.00 0.00 3.16
2259 10593 9.121517 GAGTGTGATGATTACAAAATTCAGTTG 57.878 33.333 0.00 0.00 0.00 3.16
2260 10594 8.849168 AGTGTGATGATTACAAAATTCAGTTGA 58.151 29.630 0.00 0.00 0.00 3.18
2261 10595 9.462174 GTGTGATGATTACAAAATTCAGTTGAA 57.538 29.630 0.00 0.00 38.56 2.69
2286 10620 6.690194 AAAATAATCTGATGTGGCACTCTC 57.310 37.500 19.83 15.34 0.00 3.20
2287 10621 2.306341 AATCTGATGTGGCACTCTCG 57.694 50.000 19.83 11.34 0.00 4.04
2288 10622 1.478631 ATCTGATGTGGCACTCTCGA 58.521 50.000 19.83 15.42 0.00 4.04
2289 10623 1.478631 TCTGATGTGGCACTCTCGAT 58.521 50.000 19.83 2.82 0.00 3.59
2290 10624 1.406898 TCTGATGTGGCACTCTCGATC 59.593 52.381 19.83 12.98 0.00 3.69
2291 10625 0.461548 TGATGTGGCACTCTCGATCC 59.538 55.000 19.83 0.00 0.00 3.36
2292 10626 0.249657 GATGTGGCACTCTCGATCCC 60.250 60.000 19.83 0.00 0.00 3.85
2293 10627 1.690219 ATGTGGCACTCTCGATCCCC 61.690 60.000 19.83 0.00 0.00 4.81
2294 10628 2.764128 TGGCACTCTCGATCCCCC 60.764 66.667 0.00 0.00 0.00 5.40
2295 10629 2.764128 GGCACTCTCGATCCCCCA 60.764 66.667 0.00 0.00 0.00 4.96
2296 10630 2.501610 GCACTCTCGATCCCCCAC 59.498 66.667 0.00 0.00 0.00 4.61
2297 10631 3.095347 GCACTCTCGATCCCCCACC 62.095 68.421 0.00 0.00 0.00 4.61
2298 10632 1.685765 CACTCTCGATCCCCCACCA 60.686 63.158 0.00 0.00 0.00 4.17
2299 10633 1.080354 ACTCTCGATCCCCCACCAA 59.920 57.895 0.00 0.00 0.00 3.67
2300 10634 0.546747 ACTCTCGATCCCCCACCAAA 60.547 55.000 0.00 0.00 0.00 3.28
2301 10635 0.179000 CTCTCGATCCCCCACCAAAG 59.821 60.000 0.00 0.00 0.00 2.77
2302 10636 1.452108 CTCGATCCCCCACCAAAGC 60.452 63.158 0.00 0.00 0.00 3.51
2303 10637 2.440247 CGATCCCCCACCAAAGCC 60.440 66.667 0.00 0.00 0.00 4.35
2304 10638 2.770130 GATCCCCCACCAAAGCCA 59.230 61.111 0.00 0.00 0.00 4.75
2305 10639 1.311059 GATCCCCCACCAAAGCCAT 59.689 57.895 0.00 0.00 0.00 4.40
2306 10640 1.002017 ATCCCCCACCAAAGCCATG 59.998 57.895 0.00 0.00 0.00 3.66
2307 10641 1.517538 ATCCCCCACCAAAGCCATGA 61.518 55.000 0.00 0.00 0.00 3.07
2308 10642 1.002017 CCCCCACCAAAGCCATGAT 59.998 57.895 0.00 0.00 0.00 2.45
2309 10643 0.261402 CCCCCACCAAAGCCATGATA 59.739 55.000 0.00 0.00 0.00 2.15
2310 10644 1.342874 CCCCCACCAAAGCCATGATAA 60.343 52.381 0.00 0.00 0.00 1.75
2311 10645 2.681422 CCCCACCAAAGCCATGATAAT 58.319 47.619 0.00 0.00 0.00 1.28
2312 10646 2.629617 CCCCACCAAAGCCATGATAATC 59.370 50.000 0.00 0.00 0.00 1.75
2313 10647 3.298619 CCCACCAAAGCCATGATAATCA 58.701 45.455 0.00 0.00 0.00 2.57
2314 10648 3.899360 CCCACCAAAGCCATGATAATCAT 59.101 43.478 0.00 0.00 37.65 2.45
2315 10649 4.021719 CCCACCAAAGCCATGATAATCATC 60.022 45.833 0.00 0.00 34.28 2.92
2316 10650 4.831155 CCACCAAAGCCATGATAATCATCT 59.169 41.667 0.00 0.00 34.28 2.90
2317 10651 5.303589 CCACCAAAGCCATGATAATCATCTT 59.696 40.000 0.00 0.00 34.28 2.40
2318 10652 6.183360 CCACCAAAGCCATGATAATCATCTTT 60.183 38.462 0.00 0.00 34.28 2.52
2319 10653 6.700081 CACCAAAGCCATGATAATCATCTTTG 59.300 38.462 14.05 14.05 42.36 2.77
2320 10654 6.608405 ACCAAAGCCATGATAATCATCTTTGA 59.392 34.615 19.10 0.00 43.75 2.69
2321 10655 7.124599 ACCAAAGCCATGATAATCATCTTTGAA 59.875 33.333 19.10 0.00 43.75 2.69
2322 10656 7.652105 CCAAAGCCATGATAATCATCTTTGAAG 59.348 37.037 19.10 7.02 43.75 3.02
2323 10657 8.410912 CAAAGCCATGATAATCATCTTTGAAGA 58.589 33.333 15.15 0.00 43.75 2.87
2324 10658 7.747155 AGCCATGATAATCATCTTTGAAGAG 57.253 36.000 0.00 0.00 38.66 2.85
2325 10659 6.715718 AGCCATGATAATCATCTTTGAAGAGG 59.284 38.462 0.00 0.00 38.66 3.69
2327 10661 7.308469 GCCATGATAATCATCTTTGAAGAGGAC 60.308 40.741 9.93 0.00 46.96 3.85
2328 10662 7.937942 CCATGATAATCATCTTTGAAGAGGACT 59.062 37.037 9.93 2.75 46.96 3.85
2329 10663 8.991026 CATGATAATCATCTTTGAAGAGGACTC 58.009 37.037 9.93 8.27 46.96 3.36
2330 10664 7.205992 TGATAATCATCTTTGAAGAGGACTCG 58.794 38.462 9.93 0.00 46.96 4.18
2331 10665 5.667539 AATCATCTTTGAAGAGGACTCGA 57.332 39.130 9.93 0.00 46.96 4.04
2332 10666 4.442375 TCATCTTTGAAGAGGACTCGAC 57.558 45.455 4.16 0.00 40.51 4.20
2333 10667 3.193691 TCATCTTTGAAGAGGACTCGACC 59.806 47.826 4.16 0.00 40.51 4.79
2334 10668 2.594131 TCTTTGAAGAGGACTCGACCA 58.406 47.619 0.00 0.00 34.09 4.02
2335 10669 2.963101 TCTTTGAAGAGGACTCGACCAA 59.037 45.455 0.00 0.00 34.09 3.67
2336 10670 3.386726 TCTTTGAAGAGGACTCGACCAAA 59.613 43.478 12.47 12.47 34.09 3.28
2337 10671 4.040461 TCTTTGAAGAGGACTCGACCAAAT 59.960 41.667 13.05 0.00 31.96 2.32
2338 10672 3.319137 TGAAGAGGACTCGACCAAATG 57.681 47.619 0.00 0.00 34.09 2.32
2339 10673 2.897326 TGAAGAGGACTCGACCAAATGA 59.103 45.455 0.00 0.00 34.09 2.57
2340 10674 3.254892 GAAGAGGACTCGACCAAATGAC 58.745 50.000 0.00 0.00 34.09 3.06
2341 10675 2.530701 AGAGGACTCGACCAAATGACT 58.469 47.619 0.00 0.00 34.09 3.41
2342 10676 2.900546 AGAGGACTCGACCAAATGACTT 59.099 45.455 0.00 0.00 34.09 3.01
2343 10677 2.996621 GAGGACTCGACCAAATGACTTG 59.003 50.000 0.00 0.00 34.52 3.16
2344 10678 6.366817 AGAGGACTCGACCAAATGACTTGG 62.367 50.000 1.93 1.93 46.42 3.61
2356 10690 6.042638 CAAATGACTTGGTAGAAGAGAGGA 57.957 41.667 0.00 0.00 0.00 3.71
2357 10691 5.669164 AATGACTTGGTAGAAGAGAGGAC 57.331 43.478 0.00 0.00 0.00 3.85
2358 10692 3.082548 TGACTTGGTAGAAGAGAGGACG 58.917 50.000 0.00 0.00 0.00 4.79
2359 10693 1.819903 ACTTGGTAGAAGAGAGGACGC 59.180 52.381 0.00 0.00 0.00 5.19
2360 10694 0.809385 TTGGTAGAAGAGAGGACGCG 59.191 55.000 3.53 3.53 0.00 6.01
2361 10695 0.035725 TGGTAGAAGAGAGGACGCGA 60.036 55.000 15.93 0.00 0.00 5.87
2362 10696 0.377905 GGTAGAAGAGAGGACGCGAC 59.622 60.000 15.93 6.56 0.00 5.19
2363 10697 1.085091 GTAGAAGAGAGGACGCGACA 58.915 55.000 15.93 0.00 0.00 4.35
2364 10698 1.671845 GTAGAAGAGAGGACGCGACAT 59.328 52.381 15.93 3.25 0.00 3.06
2365 10699 0.736053 AGAAGAGAGGACGCGACATC 59.264 55.000 15.93 15.38 0.00 3.06
2366 10700 0.452184 GAAGAGAGGACGCGACATCA 59.548 55.000 23.41 0.00 0.00 3.07
2367 10701 0.888619 AAGAGAGGACGCGACATCAA 59.111 50.000 23.41 0.00 0.00 2.57
2368 10702 0.453793 AGAGAGGACGCGACATCAAG 59.546 55.000 23.41 0.00 0.00 3.02
2369 10703 0.452184 GAGAGGACGCGACATCAAGA 59.548 55.000 23.41 0.00 0.00 3.02
2370 10704 0.453793 AGAGGACGCGACATCAAGAG 59.546 55.000 23.41 0.00 0.00 2.85
2371 10705 1.142778 GAGGACGCGACATCAAGAGC 61.143 60.000 15.93 0.00 0.00 4.09
2372 10706 1.446099 GGACGCGACATCAAGAGCA 60.446 57.895 15.93 0.00 0.00 4.26
2373 10707 1.014044 GGACGCGACATCAAGAGCAA 61.014 55.000 15.93 0.00 0.00 3.91
2374 10708 0.368227 GACGCGACATCAAGAGCAAG 59.632 55.000 15.93 0.00 0.00 4.01
2375 10709 0.038251 ACGCGACATCAAGAGCAAGA 60.038 50.000 15.93 0.00 0.00 3.02
2376 10710 0.644331 CGCGACATCAAGAGCAAGAG 59.356 55.000 0.00 0.00 0.00 2.85
2377 10711 0.373024 GCGACATCAAGAGCAAGAGC 59.627 55.000 0.00 0.00 42.56 4.09
2378 10712 1.718396 CGACATCAAGAGCAAGAGCA 58.282 50.000 0.00 0.00 45.49 4.26
2379 10713 1.392853 CGACATCAAGAGCAAGAGCAC 59.607 52.381 0.00 0.00 45.49 4.40
2380 10714 1.736681 GACATCAAGAGCAAGAGCACC 59.263 52.381 0.00 0.00 45.49 5.01
2381 10715 0.725686 CATCAAGAGCAAGAGCACCG 59.274 55.000 0.00 0.00 45.49 4.94
2382 10716 0.322975 ATCAAGAGCAAGAGCACCGT 59.677 50.000 0.00 0.00 45.49 4.83
2383 10717 0.601046 TCAAGAGCAAGAGCACCGTG 60.601 55.000 0.00 0.00 45.49 4.94
2384 10718 0.882042 CAAGAGCAAGAGCACCGTGT 60.882 55.000 0.00 0.00 45.49 4.49
2385 10719 0.882042 AAGAGCAAGAGCACCGTGTG 60.882 55.000 0.00 0.25 45.49 3.82
2386 10720 1.595382 GAGCAAGAGCACCGTGTGT 60.595 57.895 0.00 0.00 45.49 3.72
2387 10721 0.319555 GAGCAAGAGCACCGTGTGTA 60.320 55.000 0.00 0.00 45.49 2.90
2388 10722 0.600255 AGCAAGAGCACCGTGTGTAC 60.600 55.000 0.00 0.00 45.49 2.90
2389 10723 0.878523 GCAAGAGCACCGTGTGTACA 60.879 55.000 0.00 0.00 41.58 2.90
2390 10724 0.859232 CAAGAGCACCGTGTGTACAC 59.141 55.000 19.36 19.36 43.15 2.90
2400 10734 1.922570 GTGTGTACACGAGCCCATAG 58.077 55.000 20.61 0.00 37.10 2.23
2401 10735 1.475280 GTGTGTACACGAGCCCATAGA 59.525 52.381 20.61 0.00 37.10 1.98
2402 10736 2.100916 GTGTGTACACGAGCCCATAGAT 59.899 50.000 20.61 0.00 37.10 1.98
2403 10737 3.317149 GTGTGTACACGAGCCCATAGATA 59.683 47.826 20.61 0.00 37.10 1.98
2404 10738 3.568430 TGTGTACACGAGCCCATAGATAG 59.432 47.826 20.61 0.00 0.00 2.08
2405 10739 3.568853 GTGTACACGAGCCCATAGATAGT 59.431 47.826 10.84 0.00 0.00 2.12
2406 10740 4.037684 GTGTACACGAGCCCATAGATAGTT 59.962 45.833 10.84 0.00 0.00 2.24
2407 10741 4.647853 TGTACACGAGCCCATAGATAGTTT 59.352 41.667 0.00 0.00 0.00 2.66
2408 10742 4.323553 ACACGAGCCCATAGATAGTTTC 57.676 45.455 0.00 0.00 0.00 2.78
2409 10743 3.961408 ACACGAGCCCATAGATAGTTTCT 59.039 43.478 0.00 0.00 38.57 2.52
2410 10744 4.406003 ACACGAGCCCATAGATAGTTTCTT 59.594 41.667 0.00 0.00 35.79 2.52
2411 10745 4.985409 CACGAGCCCATAGATAGTTTCTTC 59.015 45.833 0.00 0.00 35.79 2.87
2412 10746 4.039366 ACGAGCCCATAGATAGTTTCTTCC 59.961 45.833 0.00 0.00 35.79 3.46
2413 10747 4.282195 CGAGCCCATAGATAGTTTCTTCCT 59.718 45.833 0.00 0.00 35.79 3.36
2414 10748 5.565834 CGAGCCCATAGATAGTTTCTTCCTC 60.566 48.000 0.00 0.00 35.79 3.71
2415 10749 5.219739 AGCCCATAGATAGTTTCTTCCTCA 58.780 41.667 0.00 0.00 35.79 3.86
2416 10750 5.848921 AGCCCATAGATAGTTTCTTCCTCAT 59.151 40.000 0.00 0.00 35.79 2.90
2417 10751 7.019388 AGCCCATAGATAGTTTCTTCCTCATA 58.981 38.462 0.00 0.00 35.79 2.15
2418 10752 7.180051 AGCCCATAGATAGTTTCTTCCTCATAG 59.820 40.741 0.00 0.00 35.79 2.23
2419 10753 7.179338 GCCCATAGATAGTTTCTTCCTCATAGA 59.821 40.741 0.00 0.00 35.79 1.98
2420 10754 9.094578 CCCATAGATAGTTTCTTCCTCATAGAA 57.905 37.037 0.00 0.00 35.79 2.10
2430 10764 9.943163 GTTTCTTCCTCATAGAAAGATATTTGC 57.057 33.333 0.00 0.00 41.02 3.68
2431 10765 9.685276 TTTCTTCCTCATAGAAAGATATTTGCA 57.315 29.630 0.00 0.00 36.86 4.08
2432 10766 9.685276 TTCTTCCTCATAGAAAGATATTTGCAA 57.315 29.630 0.00 0.00 0.00 4.08
2433 10767 9.685276 TCTTCCTCATAGAAAGATATTTGCAAA 57.315 29.630 15.44 15.44 0.00 3.68
2434 10768 9.727627 CTTCCTCATAGAAAGATATTTGCAAAC 57.272 33.333 15.41 1.67 0.00 2.93
2435 10769 8.806429 TCCTCATAGAAAGATATTTGCAAACA 57.194 30.769 15.41 2.31 0.00 2.83
2436 10770 9.241919 TCCTCATAGAAAGATATTTGCAAACAA 57.758 29.630 15.41 6.25 0.00 2.83
2443 10777 9.798994 AGAAAGATATTTGCAAACAATCATCTC 57.201 29.630 26.28 20.51 36.45 2.75
2444 10778 8.937634 AAAGATATTTGCAAACAATCATCTCC 57.062 30.769 26.28 9.35 36.45 3.71
2445 10779 6.732154 AGATATTTGCAAACAATCATCTCCG 58.268 36.000 26.28 0.00 34.20 4.63
2446 10780 3.574284 TTTGCAAACAATCATCTCCGG 57.426 42.857 8.05 0.00 35.21 5.14
2447 10781 2.488204 TGCAAACAATCATCTCCGGA 57.512 45.000 2.93 2.93 0.00 5.14
2448 10782 2.789213 TGCAAACAATCATCTCCGGAA 58.211 42.857 5.23 0.00 0.00 4.30
2449 10783 3.153130 TGCAAACAATCATCTCCGGAAA 58.847 40.909 5.23 0.00 0.00 3.13
2450 10784 3.057596 TGCAAACAATCATCTCCGGAAAC 60.058 43.478 5.23 0.00 0.00 2.78
2451 10785 3.191371 GCAAACAATCATCTCCGGAAACT 59.809 43.478 5.23 0.00 0.00 2.66
2452 10786 4.726416 CAAACAATCATCTCCGGAAACTG 58.274 43.478 5.23 3.23 0.00 3.16
2453 10787 3.981071 ACAATCATCTCCGGAAACTGA 57.019 42.857 5.23 9.17 0.00 3.41
2454 10788 4.286297 ACAATCATCTCCGGAAACTGAA 57.714 40.909 5.23 0.00 0.00 3.02
2455 10789 4.651778 ACAATCATCTCCGGAAACTGAAA 58.348 39.130 5.23 0.00 0.00 2.69
2456 10790 4.455877 ACAATCATCTCCGGAAACTGAAAC 59.544 41.667 5.23 0.00 0.00 2.78
2457 10791 3.053831 TCATCTCCGGAAACTGAAACC 57.946 47.619 5.23 0.00 0.00 3.27
2458 10792 2.370519 TCATCTCCGGAAACTGAAACCA 59.629 45.455 5.23 0.00 0.00 3.67
2459 10793 3.009033 TCATCTCCGGAAACTGAAACCAT 59.991 43.478 5.23 0.00 0.00 3.55
2460 10794 3.502123 TCTCCGGAAACTGAAACCATT 57.498 42.857 5.23 0.00 0.00 3.16
2461 10795 3.827722 TCTCCGGAAACTGAAACCATTT 58.172 40.909 5.23 0.00 0.00 2.32
2462 10796 3.818773 TCTCCGGAAACTGAAACCATTTC 59.181 43.478 5.23 0.00 40.08 2.17
2463 10797 2.550606 TCCGGAAACTGAAACCATTTCG 59.449 45.455 0.00 0.00 42.55 3.46
2464 10798 2.292292 CCGGAAACTGAAACCATTTCGT 59.708 45.455 0.00 0.00 42.55 3.85
2465 10799 3.551551 CGGAAACTGAAACCATTTCGTC 58.448 45.455 0.00 0.00 42.55 4.20
2466 10800 3.002862 CGGAAACTGAAACCATTTCGTCA 59.997 43.478 0.00 0.00 42.55 4.35
2467 10801 4.320202 CGGAAACTGAAACCATTTCGTCAT 60.320 41.667 0.00 0.00 42.55 3.06
2468 10802 5.528870 GGAAACTGAAACCATTTCGTCATT 58.471 37.500 0.00 0.00 42.55 2.57
2469 10803 5.983118 GGAAACTGAAACCATTTCGTCATTT 59.017 36.000 0.00 0.00 42.55 2.32
2470 10804 6.074356 GGAAACTGAAACCATTTCGTCATTTG 60.074 38.462 0.00 0.00 42.55 2.32
2471 10805 5.766150 ACTGAAACCATTTCGTCATTTGA 57.234 34.783 0.00 0.00 42.55 2.69
2472 10806 5.519722 ACTGAAACCATTTCGTCATTTGAC 58.480 37.500 0.46 0.46 42.55 3.18
2473 10807 4.865776 TGAAACCATTTCGTCATTTGACC 58.134 39.130 5.17 0.00 42.55 4.02
2474 10808 4.339530 TGAAACCATTTCGTCATTTGACCA 59.660 37.500 5.17 0.00 42.55 4.02
2475 10809 4.927978 AACCATTTCGTCATTTGACCAA 57.072 36.364 5.17 0.00 41.86 3.67
2476 10810 4.927978 ACCATTTCGTCATTTGACCAAA 57.072 36.364 6.05 6.05 41.86 3.28
2477 10811 5.269505 ACCATTTCGTCATTTGACCAAAA 57.730 34.783 7.41 7.63 38.32 2.44
2478 10812 5.288804 ACCATTTCGTCATTTGACCAAAAG 58.711 37.500 7.41 3.99 38.32 2.27
2479 10813 4.150451 CCATTTCGTCATTTGACCAAAAGC 59.850 41.667 7.41 0.00 38.32 3.51
2480 10814 4.377839 TTTCGTCATTTGACCAAAAGCA 57.622 36.364 5.17 0.00 41.86 3.91
2481 10815 4.582701 TTCGTCATTTGACCAAAAGCAT 57.417 36.364 5.17 0.00 41.86 3.79
2482 10816 4.582701 TCGTCATTTGACCAAAAGCATT 57.417 36.364 5.17 0.00 41.86 3.56
2483 10817 4.545610 TCGTCATTTGACCAAAAGCATTC 58.454 39.130 5.17 0.00 41.86 2.67
2484 10818 4.278170 TCGTCATTTGACCAAAAGCATTCT 59.722 37.500 5.17 0.00 41.86 2.40
2485 10819 4.984161 CGTCATTTGACCAAAAGCATTCTT 59.016 37.500 5.17 0.00 41.86 2.52
2486 10820 5.117592 CGTCATTTGACCAAAAGCATTCTTC 59.882 40.000 5.17 0.00 41.86 2.87
2487 10821 5.984926 GTCATTTGACCAAAAGCATTCTTCA 59.015 36.000 0.00 0.00 39.07 3.02
2488 10822 6.479660 GTCATTTGACCAAAAGCATTCTTCAA 59.520 34.615 0.00 0.00 39.07 2.69
2489 10823 7.011295 GTCATTTGACCAAAAGCATTCTTCAAA 59.989 33.333 0.00 7.38 39.07 2.69
2490 10824 6.660887 TTTGACCAAAAGCATTCTTCAAAC 57.339 33.333 0.00 0.00 0.00 2.93
2491 10825 5.336150 TGACCAAAAGCATTCTTCAAACA 57.664 34.783 0.00 0.00 0.00 2.83
2492 10826 5.350633 TGACCAAAAGCATTCTTCAAACAG 58.649 37.500 0.00 0.00 0.00 3.16
2493 10827 5.126869 TGACCAAAAGCATTCTTCAAACAGA 59.873 36.000 0.00 0.00 0.00 3.41
2505 10839 7.539712 TTCTTCAAACAGATATTAGGCTTCG 57.460 36.000 0.00 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
1 2 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2 3 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
3 4 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4 5 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
5 6 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
6 7 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
7 8 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
8 9 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
9 10 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
10 11 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
17 18 9.569167 CGTATGTAGACAAATCTAAGACAAGAA 57.431 33.333 0.00 0.00 39.20 2.52
18 19 8.953313 TCGTATGTAGACAAATCTAAGACAAGA 58.047 33.333 0.00 0.00 39.20 3.02
19 20 9.569167 TTCGTATGTAGACAAATCTAAGACAAG 57.431 33.333 0.00 0.00 39.20 3.16
21 22 9.516314 CATTCGTATGTAGACAAATCTAAGACA 57.484 33.333 0.00 0.00 39.20 3.41
22 23 9.517609 ACATTCGTATGTAGACAAATCTAAGAC 57.482 33.333 5.81 0.00 43.12 3.01
86 87 9.546428 CCCAAAATTCTTGTCTTAGATTTGTTT 57.454 29.630 0.00 0.00 28.79 2.83
87 88 8.923270 TCCCAAAATTCTTGTCTTAGATTTGTT 58.077 29.630 0.00 0.00 28.79 2.83
88 89 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
89 90 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
90 91 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
91 92 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
92 93 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
93 94 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
94 95 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
95 96 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
96 97 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
97 98 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
98 99 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
99 100 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
100 101 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
101 102 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
102 103 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
103 104 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
104 105 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
105 106 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
106 107 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
107 108 2.023695 AGTATACTCCCTCCGTCCCAAA 60.024 50.000 0.00 0.00 0.00 3.28
108 109 1.572415 AGTATACTCCCTCCGTCCCAA 59.428 52.381 0.00 0.00 0.00 4.12
109 110 1.144503 GAGTATACTCCCTCCGTCCCA 59.855 57.143 20.40 0.00 37.02 4.37
110 111 1.424684 AGAGTATACTCCCTCCGTCCC 59.575 57.143 25.93 1.42 43.88 4.46
111 112 2.955342 AGAGTATACTCCCTCCGTCC 57.045 55.000 25.93 2.13 43.88 4.79
112 113 3.250521 CGAAAGAGTATACTCCCTCCGTC 59.749 52.174 25.93 14.26 43.88 4.79
113 114 3.212685 CGAAAGAGTATACTCCCTCCGT 58.787 50.000 25.93 6.74 43.88 4.69
114 115 2.553172 CCGAAAGAGTATACTCCCTCCG 59.447 54.545 25.93 21.93 43.88 4.63
115 116 3.822167 CTCCGAAAGAGTATACTCCCTCC 59.178 52.174 25.93 13.57 43.88 4.30
116 117 3.253921 GCTCCGAAAGAGTATACTCCCTC 59.746 52.174 25.93 20.70 45.21 4.30
117 118 3.224269 GCTCCGAAAGAGTATACTCCCT 58.776 50.000 25.93 15.18 45.21 4.20
118 119 2.957006 TGCTCCGAAAGAGTATACTCCC 59.043 50.000 25.93 15.70 45.21 4.30
119 120 3.884091 TCTGCTCCGAAAGAGTATACTCC 59.116 47.826 25.93 12.30 45.21 3.85
120 121 5.502153 TTCTGCTCCGAAAGAGTATACTC 57.498 43.478 22.97 22.97 45.21 2.59
174 176 5.524535 AGCATCTCTAGGAACCTACTTCTT 58.475 41.667 0.00 0.00 0.00 2.52
275 277 9.585369 GGAACTATCTAGTTACCCTACACTTAT 57.415 37.037 2.68 0.00 45.84 1.73
305 307 5.766150 TTTGTTTCGGAACTTCATGATGT 57.234 34.783 8.32 8.37 36.70 3.06
319 321 7.336975 CAGAATTTAAGCTTGGTTTTGTTTCG 58.663 34.615 9.86 0.00 0.00 3.46
329 331 4.736793 CGCTTATGCAGAATTTAAGCTTGG 59.263 41.667 20.84 7.40 43.50 3.61
330 332 4.736793 CCGCTTATGCAGAATTTAAGCTTG 59.263 41.667 20.84 11.76 43.50 4.01
344 346 3.491267 GTGACTTATGAGACCGCTTATGC 59.509 47.826 0.00 0.00 0.00 3.14
362 364 7.172532 TGACATTGTGTATCAACTTAAGGTGAC 59.827 37.037 25.15 14.61 38.97 3.67
526 542 6.387465 CAATTGATCTGATGTTTGCTCACTT 58.613 36.000 0.00 0.00 0.00 3.16
529 545 4.768448 ACCAATTGATCTGATGTTTGCTCA 59.232 37.500 7.12 0.00 0.00 4.26
536 552 4.679639 GCATGCAACCAATTGATCTGATGT 60.680 41.667 14.21 0.00 38.15 3.06
546 3441 1.575419 ATCCTGGCATGCAACCAATT 58.425 45.000 21.36 0.00 36.56 2.32
559 3454 5.106157 CCAGTAACTTGCTTTGTTATCCTGG 60.106 44.000 13.48 13.48 37.58 4.45
589 3484 9.895138 TGTTAGGAAGTGTTCTAGTAACTTTTT 57.105 29.630 8.25 4.42 34.37 1.94
590 3485 9.543783 CTGTTAGGAAGTGTTCTAGTAACTTTT 57.456 33.333 8.25 3.30 34.37 2.27
591 3486 8.148999 CCTGTTAGGAAGTGTTCTAGTAACTTT 58.851 37.037 8.25 3.56 37.67 2.66
592 3487 7.508296 TCCTGTTAGGAAGTGTTCTAGTAACTT 59.492 37.037 7.03 7.03 42.51 2.66
593 3488 7.008941 TCCTGTTAGGAAGTGTTCTAGTAACT 58.991 38.462 0.00 0.00 42.51 2.24
594 3489 7.224522 TCCTGTTAGGAAGTGTTCTAGTAAC 57.775 40.000 0.00 0.00 42.51 2.50
650 3545 2.087009 GTAGTGAGTGTCGCGGTGC 61.087 63.158 6.13 0.00 30.95 5.01
725 3620 7.609918 TGGCTGCTAAAATAGTTATGTTCAGAA 59.390 33.333 0.00 0.00 0.00 3.02
734 3629 8.972458 TTGATATGTGGCTGCTAAAATAGTTA 57.028 30.769 0.00 0.00 0.00 2.24
770 3672 1.070577 GCAGTTGTCGTGCACTACTTG 60.071 52.381 20.70 16.34 38.84 3.16
793 3698 8.833231 ACGAAATGATTTCTTTCTCTGAGTTA 57.167 30.769 15.17 0.00 37.52 2.24
796 3701 6.522510 GCAACGAAATGATTTCTTTCTCTGAG 59.477 38.462 15.17 0.00 37.52 3.35
978 3911 4.392921 TCGATGAATCTTCTCCTTGGAC 57.607 45.455 0.00 0.00 0.00 4.02
1104 4043 2.753043 GGGTACAGGCCGACGAGA 60.753 66.667 0.00 0.00 0.00 4.04
1245 4192 4.552365 ATGGTCATGCCGCCGAGG 62.552 66.667 0.00 0.00 44.97 4.63
1395 9707 0.175989 GGGTCGTCTTGGATCCAGAC 59.824 60.000 23.73 23.73 37.16 3.51
1566 9882 6.212955 CCAATGCTAAACCAAATAATACCGG 58.787 40.000 0.00 0.00 0.00 5.28
1670 9994 7.652727 TGATCATATACGGAGACTCAAAGAAG 58.347 38.462 4.53 0.00 0.00 2.85
1684 10008 7.631915 TGATTACCGTTGTTGATCATATACG 57.368 36.000 13.78 13.78 0.00 3.06
1720 10044 8.330302 GGTTTTGTCATCACTCAATTTTTCTTG 58.670 33.333 0.00 0.00 0.00 3.02
1721 10045 8.040132 TGGTTTTGTCATCACTCAATTTTTCTT 58.960 29.630 0.00 0.00 0.00 2.52
1723 10047 7.769272 TGGTTTTGTCATCACTCAATTTTTC 57.231 32.000 0.00 0.00 0.00 2.29
1729 10053 6.303054 TCCTATTGGTTTTGTCATCACTCAA 58.697 36.000 0.00 0.00 34.23 3.02
1730 10054 5.875224 TCCTATTGGTTTTGTCATCACTCA 58.125 37.500 0.00 0.00 34.23 3.41
1801 10134 6.238484 GCTAGTGTGTTTGCTGAAATATAGGG 60.238 42.308 0.00 0.00 0.00 3.53
1811 10144 6.727824 ATTTACTAGCTAGTGTGTTTGCTG 57.272 37.500 32.21 1.76 37.10 4.41
1857 10191 9.482627 AACTTCTGTGTTAGAATTAGACAAGAG 57.517 33.333 0.00 0.00 44.12 2.85
1917 10251 1.948104 TATGGAAATGTCGCTTCCCG 58.052 50.000 0.00 0.00 41.54 5.14
1940 10274 7.399523 CGACTATGAAAAGGCTTACAACATAC 58.600 38.462 0.00 0.00 0.00 2.39
1946 10280 4.546829 ACCGACTATGAAAAGGCTTACA 57.453 40.909 0.00 4.78 0.00 2.41
1947 10281 6.036844 CCTTAACCGACTATGAAAAGGCTTAC 59.963 42.308 0.00 0.00 0.00 2.34
1965 10299 5.934402 TTCTAGTGGTCTGATCCTTAACC 57.066 43.478 0.00 0.00 0.00 2.85
2005 10339 1.227674 CCGCCTATGAGCTTCCCAC 60.228 63.158 0.00 0.00 0.00 4.61
2008 10342 1.300481 GTTTCCGCCTATGAGCTTCC 58.700 55.000 0.00 0.00 0.00 3.46
2010 10344 0.535335 TCGTTTCCGCCTATGAGCTT 59.465 50.000 0.00 0.00 0.00 3.74
2011 10345 0.179108 GTCGTTTCCGCCTATGAGCT 60.179 55.000 0.00 0.00 0.00 4.09
2012 10346 0.459585 TGTCGTTTCCGCCTATGAGC 60.460 55.000 0.00 0.00 0.00 4.26
2013 10347 1.135083 AGTGTCGTTTCCGCCTATGAG 60.135 52.381 0.00 0.00 0.00 2.90
2014 10348 0.892755 AGTGTCGTTTCCGCCTATGA 59.107 50.000 0.00 0.00 0.00 2.15
2015 10349 1.393539 CAAGTGTCGTTTCCGCCTATG 59.606 52.381 0.00 0.00 0.00 2.23
2016 10350 1.001633 ACAAGTGTCGTTTCCGCCTAT 59.998 47.619 0.00 0.00 0.00 2.57
2017 10351 0.390124 ACAAGTGTCGTTTCCGCCTA 59.610 50.000 0.00 0.00 0.00 3.93
2018 10352 0.463116 AACAAGTGTCGTTTCCGCCT 60.463 50.000 0.00 0.00 0.00 5.52
2019 10353 1.219646 TAACAAGTGTCGTTTCCGCC 58.780 50.000 0.00 0.00 0.00 6.13
2020 10354 3.531262 AATAACAAGTGTCGTTTCCGC 57.469 42.857 0.00 0.00 0.00 5.54
2021 10355 4.145756 GCAAAATAACAAGTGTCGTTTCCG 59.854 41.667 0.00 0.00 0.00 4.30
2022 10356 5.038033 TGCAAAATAACAAGTGTCGTTTCC 58.962 37.500 0.00 0.00 0.00 3.13
2023 10357 6.034044 TGTTGCAAAATAACAAGTGTCGTTTC 59.966 34.615 0.00 0.00 35.29 2.78
2024 10358 5.864474 TGTTGCAAAATAACAAGTGTCGTTT 59.136 32.000 0.00 0.00 35.29 3.60
2025 10359 5.403246 TGTTGCAAAATAACAAGTGTCGTT 58.597 33.333 0.00 0.00 35.29 3.85
2026 10360 4.987832 TGTTGCAAAATAACAAGTGTCGT 58.012 34.783 0.00 0.00 35.29 4.34
2027 10361 5.940603 TTGTTGCAAAATAACAAGTGTCG 57.059 34.783 0.00 0.00 41.57 4.35
2052 10386 6.998968 TTCATTTCAACAAGTGCCATTTTT 57.001 29.167 0.00 0.00 0.00 1.94
2053 10387 6.993902 AGATTCATTTCAACAAGTGCCATTTT 59.006 30.769 0.00 0.00 0.00 1.82
2054 10388 6.527423 AGATTCATTTCAACAAGTGCCATTT 58.473 32.000 0.00 0.00 0.00 2.32
2055 10389 6.105397 AGATTCATTTCAACAAGTGCCATT 57.895 33.333 0.00 0.00 0.00 3.16
2056 10390 5.733620 AGATTCATTTCAACAAGTGCCAT 57.266 34.783 0.00 0.00 0.00 4.40
2057 10391 5.048083 GGTAGATTCATTTCAACAAGTGCCA 60.048 40.000 0.00 0.00 0.00 4.92
2058 10392 5.402398 GGTAGATTCATTTCAACAAGTGCC 58.598 41.667 0.00 0.00 0.00 5.01
2059 10393 5.402398 GGGTAGATTCATTTCAACAAGTGC 58.598 41.667 0.00 0.00 0.00 4.40
2060 10394 5.711976 AGGGGTAGATTCATTTCAACAAGTG 59.288 40.000 0.00 0.00 0.00 3.16
2061 10395 5.892348 AGGGGTAGATTCATTTCAACAAGT 58.108 37.500 0.00 0.00 0.00 3.16
2062 10396 7.393234 TGTTAGGGGTAGATTCATTTCAACAAG 59.607 37.037 0.00 0.00 0.00 3.16
2063 10397 7.235079 TGTTAGGGGTAGATTCATTTCAACAA 58.765 34.615 0.00 0.00 0.00 2.83
2064 10398 6.785076 TGTTAGGGGTAGATTCATTTCAACA 58.215 36.000 0.00 0.00 0.00 3.33
2065 10399 7.696992 TTGTTAGGGGTAGATTCATTTCAAC 57.303 36.000 0.00 0.00 0.00 3.18
2066 10400 7.726291 TGTTTGTTAGGGGTAGATTCATTTCAA 59.274 33.333 0.00 0.00 0.00 2.69
2067 10401 7.235079 TGTTTGTTAGGGGTAGATTCATTTCA 58.765 34.615 0.00 0.00 0.00 2.69
2068 10402 7.696992 TGTTTGTTAGGGGTAGATTCATTTC 57.303 36.000 0.00 0.00 0.00 2.17
2069 10403 9.408648 CTATGTTTGTTAGGGGTAGATTCATTT 57.591 33.333 0.00 0.00 0.00 2.32
2070 10404 8.557450 ACTATGTTTGTTAGGGGTAGATTCATT 58.443 33.333 0.00 0.00 0.00 2.57
2071 10405 8.102484 ACTATGTTTGTTAGGGGTAGATTCAT 57.898 34.615 0.00 0.00 0.00 2.57
2072 10406 7.504926 ACTATGTTTGTTAGGGGTAGATTCA 57.495 36.000 0.00 0.00 0.00 2.57
2073 10407 8.674607 CAAACTATGTTTGTTAGGGGTAGATTC 58.325 37.037 13.20 0.00 0.00 2.52
2074 10408 7.614192 CCAAACTATGTTTGTTAGGGGTAGATT 59.386 37.037 18.05 0.00 0.00 2.40
2075 10409 7.116736 CCAAACTATGTTTGTTAGGGGTAGAT 58.883 38.462 18.05 0.00 0.00 1.98
2076 10410 6.044637 ACCAAACTATGTTTGTTAGGGGTAGA 59.955 38.462 18.05 0.00 30.32 2.59
2077 10411 6.243148 ACCAAACTATGTTTGTTAGGGGTAG 58.757 40.000 18.05 5.88 30.32 3.18
2078 10412 6.203526 ACCAAACTATGTTTGTTAGGGGTA 57.796 37.500 18.05 0.00 30.32 3.69
2079 10413 5.069518 ACCAAACTATGTTTGTTAGGGGT 57.930 39.130 18.05 8.09 0.00 4.95
2080 10414 5.279256 CCAACCAAACTATGTTTGTTAGGGG 60.279 44.000 18.05 10.39 29.98 4.79
2081 10415 5.536916 TCCAACCAAACTATGTTTGTTAGGG 59.463 40.000 18.05 14.12 29.98 3.53
2082 10416 6.642707 TCCAACCAAACTATGTTTGTTAGG 57.357 37.500 18.05 15.62 29.98 2.69
2083 10417 8.813282 GTTTTCCAACCAAACTATGTTTGTTAG 58.187 33.333 18.05 8.61 29.98 2.34
2084 10418 8.311836 TGTTTTCCAACCAAACTATGTTTGTTA 58.688 29.630 18.05 1.28 35.50 2.41
2085 10419 7.162082 TGTTTTCCAACCAAACTATGTTTGTT 58.838 30.769 18.05 11.43 35.50 2.83
2086 10420 6.702329 TGTTTTCCAACCAAACTATGTTTGT 58.298 32.000 18.05 7.20 35.50 2.83
2087 10421 7.602517 TTGTTTTCCAACCAAACTATGTTTG 57.397 32.000 14.15 14.15 35.50 2.93
2088 10422 8.622948 TTTTGTTTTCCAACCAAACTATGTTT 57.377 26.923 0.00 0.00 35.50 2.83
2089 10423 7.148323 GCTTTTGTTTTCCAACCAAACTATGTT 60.148 33.333 0.00 0.00 35.50 2.71
2090 10424 6.315144 GCTTTTGTTTTCCAACCAAACTATGT 59.685 34.615 0.00 0.00 35.50 2.29
2091 10425 6.314896 TGCTTTTGTTTTCCAACCAAACTATG 59.685 34.615 0.00 0.00 35.50 2.23
2092 10426 6.315144 GTGCTTTTGTTTTCCAACCAAACTAT 59.685 34.615 0.00 0.00 35.50 2.12
2093 10427 5.639931 GTGCTTTTGTTTTCCAACCAAACTA 59.360 36.000 0.00 0.00 35.50 2.24
2094 10428 4.454161 GTGCTTTTGTTTTCCAACCAAACT 59.546 37.500 0.00 0.00 35.50 2.66
2095 10429 4.378978 GGTGCTTTTGTTTTCCAACCAAAC 60.379 41.667 0.00 0.00 35.11 2.93
2096 10430 3.753797 GGTGCTTTTGTTTTCCAACCAAA 59.246 39.130 0.00 0.00 31.20 3.28
2097 10431 3.008485 AGGTGCTTTTGTTTTCCAACCAA 59.992 39.130 0.00 0.00 31.20 3.67
2098 10432 2.569404 AGGTGCTTTTGTTTTCCAACCA 59.431 40.909 0.00 0.00 31.20 3.67
2099 10433 3.260475 AGGTGCTTTTGTTTTCCAACC 57.740 42.857 0.00 0.00 31.20 3.77
2100 10434 4.749976 TGTAGGTGCTTTTGTTTTCCAAC 58.250 39.130 0.00 0.00 31.20 3.77
2101 10435 5.407407 TTGTAGGTGCTTTTGTTTTCCAA 57.593 34.783 0.00 0.00 0.00 3.53
2102 10436 5.127845 TGATTGTAGGTGCTTTTGTTTTCCA 59.872 36.000 0.00 0.00 0.00 3.53
2103 10437 5.596845 TGATTGTAGGTGCTTTTGTTTTCC 58.403 37.500 0.00 0.00 0.00 3.13
2104 10438 7.713764 ATTGATTGTAGGTGCTTTTGTTTTC 57.286 32.000 0.00 0.00 0.00 2.29
2105 10439 7.872483 CCTATTGATTGTAGGTGCTTTTGTTTT 59.128 33.333 0.00 0.00 35.12 2.43
2106 10440 7.378181 CCTATTGATTGTAGGTGCTTTTGTTT 58.622 34.615 0.00 0.00 35.12 2.83
2107 10441 6.924111 CCTATTGATTGTAGGTGCTTTTGTT 58.076 36.000 0.00 0.00 35.12 2.83
2108 10442 6.515272 CCTATTGATTGTAGGTGCTTTTGT 57.485 37.500 0.00 0.00 35.12 2.83
2117 10451 6.949352 AAGATTGCACCTATTGATTGTAGG 57.051 37.500 0.00 0.00 43.54 3.18
2129 10463 9.646522 AAACCTATGATTAATAAGATTGCACCT 57.353 29.630 0.00 0.00 0.00 4.00
2130 10464 9.683069 CAAACCTATGATTAATAAGATTGCACC 57.317 33.333 0.00 0.00 0.00 5.01
2131 10465 9.683069 CCAAACCTATGATTAATAAGATTGCAC 57.317 33.333 0.00 0.00 0.00 4.57
2132 10466 9.420118 ACCAAACCTATGATTAATAAGATTGCA 57.580 29.630 0.00 0.00 0.00 4.08
2162 10496 9.674068 GTTTAGGGACTTCTTATCTGAAGATTT 57.326 33.333 10.68 0.00 44.40 2.17
2163 10497 9.052365 AGTTTAGGGACTTCTTATCTGAAGATT 57.948 33.333 10.68 0.00 44.40 2.40
2164 10498 8.616799 AGTTTAGGGACTTCTTATCTGAAGAT 57.383 34.615 10.68 0.00 44.40 2.40
2165 10499 9.543231 TTAGTTTAGGGACTTCTTATCTGAAGA 57.457 33.333 10.68 0.00 44.40 2.87
2168 10502 9.268282 ACATTAGTTTAGGGACTTCTTATCTGA 57.732 33.333 0.00 0.00 41.75 3.27
2169 10503 9.319143 CACATTAGTTTAGGGACTTCTTATCTG 57.681 37.037 0.00 0.00 41.75 2.90
2170 10504 7.988028 GCACATTAGTTTAGGGACTTCTTATCT 59.012 37.037 0.00 0.00 41.75 1.98
2171 10505 7.226918 GGCACATTAGTTTAGGGACTTCTTATC 59.773 40.741 0.00 0.00 41.75 1.75
2172 10506 7.054751 GGCACATTAGTTTAGGGACTTCTTAT 58.945 38.462 0.00 0.00 41.75 1.73
2173 10507 6.412214 GGCACATTAGTTTAGGGACTTCTTA 58.588 40.000 0.00 0.00 41.75 2.10
2174 10508 5.254115 GGCACATTAGTTTAGGGACTTCTT 58.746 41.667 0.00 0.00 41.75 2.52
2175 10509 4.324331 GGGCACATTAGTTTAGGGACTTCT 60.324 45.833 0.00 0.00 41.75 2.85
2176 10510 3.945921 GGGCACATTAGTTTAGGGACTTC 59.054 47.826 0.00 0.00 41.75 3.01
2177 10511 3.591977 AGGGCACATTAGTTTAGGGACTT 59.408 43.478 0.00 0.00 41.75 3.01
2178 10512 3.054361 CAGGGCACATTAGTTTAGGGACT 60.054 47.826 0.00 0.00 46.37 3.85
2179 10513 3.054655 TCAGGGCACATTAGTTTAGGGAC 60.055 47.826 0.00 0.00 0.00 4.46
2180 10514 3.186283 TCAGGGCACATTAGTTTAGGGA 58.814 45.455 0.00 0.00 0.00 4.20
2181 10515 3.644966 TCAGGGCACATTAGTTTAGGG 57.355 47.619 0.00 0.00 0.00 3.53
2182 10516 4.331968 TGTTCAGGGCACATTAGTTTAGG 58.668 43.478 0.00 0.00 0.00 2.69
2183 10517 5.882557 AGATGTTCAGGGCACATTAGTTTAG 59.117 40.000 0.00 0.00 34.89 1.85
2184 10518 5.815581 AGATGTTCAGGGCACATTAGTTTA 58.184 37.500 0.00 0.00 34.89 2.01
2185 10519 4.666512 AGATGTTCAGGGCACATTAGTTT 58.333 39.130 0.00 0.00 34.89 2.66
2186 10520 4.307032 AGATGTTCAGGGCACATTAGTT 57.693 40.909 0.00 0.00 34.89 2.24
2187 10521 4.263462 TGAAGATGTTCAGGGCACATTAGT 60.263 41.667 0.23 0.00 37.79 2.24
2188 10522 4.264253 TGAAGATGTTCAGGGCACATTAG 58.736 43.478 0.23 0.00 37.79 1.73
2189 10523 4.299586 TGAAGATGTTCAGGGCACATTA 57.700 40.909 0.23 0.00 37.79 1.90
2190 10524 3.159213 TGAAGATGTTCAGGGCACATT 57.841 42.857 0.23 0.00 37.79 2.71
2191 10525 2.885135 TGAAGATGTTCAGGGCACAT 57.115 45.000 0.23 0.00 37.79 3.21
2192 10526 2.885135 ATGAAGATGTTCAGGGCACA 57.115 45.000 11.32 0.00 45.96 4.57
2193 10527 2.615912 GCTATGAAGATGTTCAGGGCAC 59.384 50.000 20.02 3.91 45.96 5.01
2194 10528 2.239402 TGCTATGAAGATGTTCAGGGCA 59.761 45.455 22.23 22.23 45.96 5.36
2195 10529 2.923121 TGCTATGAAGATGTTCAGGGC 58.077 47.619 18.88 18.88 45.96 5.19
2196 10530 5.862845 ACTATGCTATGAAGATGTTCAGGG 58.137 41.667 11.32 7.22 45.96 4.45
2197 10531 7.798596 AAACTATGCTATGAAGATGTTCAGG 57.201 36.000 11.32 7.54 45.96 3.86
2198 10532 9.107177 AGAAAACTATGCTATGAAGATGTTCAG 57.893 33.333 11.32 0.00 45.96 3.02
2199 10533 9.453572 AAGAAAACTATGCTATGAAGATGTTCA 57.546 29.630 7.86 7.86 46.81 3.18
2202 10536 8.607459 CGAAAGAAAACTATGCTATGAAGATGT 58.393 33.333 0.00 0.00 0.00 3.06
2203 10537 8.066595 CCGAAAGAAAACTATGCTATGAAGATG 58.933 37.037 0.00 0.00 0.00 2.90
2204 10538 7.987458 TCCGAAAGAAAACTATGCTATGAAGAT 59.013 33.333 0.00 0.00 0.00 2.40
2205 10539 7.327975 TCCGAAAGAAAACTATGCTATGAAGA 58.672 34.615 0.00 0.00 0.00 2.87
2206 10540 7.539712 TCCGAAAGAAAACTATGCTATGAAG 57.460 36.000 0.00 0.00 0.00 3.02
2207 10541 7.915293 TTCCGAAAGAAAACTATGCTATGAA 57.085 32.000 0.00 0.00 0.00 2.57
2208 10542 7.768582 TCATTCCGAAAGAAAACTATGCTATGA 59.231 33.333 0.00 0.00 38.21 2.15
2209 10543 7.919690 TCATTCCGAAAGAAAACTATGCTATG 58.080 34.615 0.00 0.00 38.21 2.23
2210 10544 7.770897 ACTCATTCCGAAAGAAAACTATGCTAT 59.229 33.333 0.00 0.00 38.21 2.97
2211 10545 7.064609 CACTCATTCCGAAAGAAAACTATGCTA 59.935 37.037 0.00 0.00 38.21 3.49
2212 10546 5.940470 ACTCATTCCGAAAGAAAACTATGCT 59.060 36.000 0.00 0.00 38.21 3.79
2213 10547 6.024049 CACTCATTCCGAAAGAAAACTATGC 58.976 40.000 0.00 0.00 38.21 3.14
2214 10548 7.017645 CACACTCATTCCGAAAGAAAACTATG 58.982 38.462 0.00 0.00 38.21 2.23
2215 10549 6.934645 TCACACTCATTCCGAAAGAAAACTAT 59.065 34.615 0.00 0.00 38.21 2.12
2216 10550 6.285224 TCACACTCATTCCGAAAGAAAACTA 58.715 36.000 0.00 0.00 38.21 2.24
2217 10551 5.123227 TCACACTCATTCCGAAAGAAAACT 58.877 37.500 0.00 0.00 38.21 2.66
2218 10552 5.418310 TCACACTCATTCCGAAAGAAAAC 57.582 39.130 0.00 0.00 38.21 2.43
2219 10553 5.762711 TCATCACACTCATTCCGAAAGAAAA 59.237 36.000 0.00 0.00 38.21 2.29
2220 10554 5.304778 TCATCACACTCATTCCGAAAGAAA 58.695 37.500 0.00 0.00 38.21 2.52
2221 10555 4.893608 TCATCACACTCATTCCGAAAGAA 58.106 39.130 0.00 0.00 39.32 2.52
2222 10556 4.535526 TCATCACACTCATTCCGAAAGA 57.464 40.909 0.00 0.00 0.00 2.52
2223 10557 5.808042 AATCATCACACTCATTCCGAAAG 57.192 39.130 0.00 0.00 0.00 2.62
2224 10558 6.169800 TGTAATCATCACACTCATTCCGAAA 58.830 36.000 0.00 0.00 0.00 3.46
2225 10559 5.729510 TGTAATCATCACACTCATTCCGAA 58.270 37.500 0.00 0.00 0.00 4.30
2226 10560 5.337578 TGTAATCATCACACTCATTCCGA 57.662 39.130 0.00 0.00 0.00 4.55
2227 10561 6.421377 TTTGTAATCATCACACTCATTCCG 57.579 37.500 0.00 0.00 0.00 4.30
2228 10562 9.294030 GAATTTTGTAATCATCACACTCATTCC 57.706 33.333 0.00 0.00 0.00 3.01
2229 10563 9.844790 TGAATTTTGTAATCATCACACTCATTC 57.155 29.630 0.00 0.00 0.00 2.67
2230 10564 9.850628 CTGAATTTTGTAATCATCACACTCATT 57.149 29.630 0.00 0.00 0.00 2.57
2231 10565 9.017509 ACTGAATTTTGTAATCATCACACTCAT 57.982 29.630 0.00 0.00 0.00 2.90
2232 10566 8.394971 ACTGAATTTTGTAATCATCACACTCA 57.605 30.769 0.00 0.00 0.00 3.41
2233 10567 9.121517 CAACTGAATTTTGTAATCATCACACTC 57.878 33.333 0.00 0.00 0.00 3.51
2234 10568 8.849168 TCAACTGAATTTTGTAATCATCACACT 58.151 29.630 0.00 0.00 0.00 3.55
2235 10569 9.462174 TTCAACTGAATTTTGTAATCATCACAC 57.538 29.630 0.00 0.00 0.00 3.82
2262 10596 6.183360 CGAGAGTGCCACATCAGATTATTTTT 60.183 38.462 0.00 0.00 0.00 1.94
2263 10597 5.295292 CGAGAGTGCCACATCAGATTATTTT 59.705 40.000 0.00 0.00 0.00 1.82
2264 10598 4.813161 CGAGAGTGCCACATCAGATTATTT 59.187 41.667 0.00 0.00 0.00 1.40
2265 10599 4.100035 TCGAGAGTGCCACATCAGATTATT 59.900 41.667 0.00 0.00 0.00 1.40
2266 10600 3.638627 TCGAGAGTGCCACATCAGATTAT 59.361 43.478 0.00 0.00 0.00 1.28
2267 10601 3.023832 TCGAGAGTGCCACATCAGATTA 58.976 45.455 0.00 0.00 0.00 1.75
2268 10602 1.827344 TCGAGAGTGCCACATCAGATT 59.173 47.619 0.00 0.00 0.00 2.40
2269 10603 1.478631 TCGAGAGTGCCACATCAGAT 58.521 50.000 0.00 0.00 0.00 2.90
2270 10604 1.406898 GATCGAGAGTGCCACATCAGA 59.593 52.381 0.00 0.00 0.00 3.27
2271 10605 1.537776 GGATCGAGAGTGCCACATCAG 60.538 57.143 0.00 0.00 0.00 2.90
2272 10606 0.461548 GGATCGAGAGTGCCACATCA 59.538 55.000 0.00 0.00 0.00 3.07
2273 10607 0.249657 GGGATCGAGAGTGCCACATC 60.250 60.000 0.00 0.00 0.00 3.06
2274 10608 1.690219 GGGGATCGAGAGTGCCACAT 61.690 60.000 0.00 0.00 0.00 3.21
2275 10609 2.359169 GGGGATCGAGAGTGCCACA 61.359 63.158 0.00 0.00 0.00 4.17
2276 10610 2.501610 GGGGATCGAGAGTGCCAC 59.498 66.667 0.00 0.00 0.00 5.01
2277 10611 2.764128 GGGGGATCGAGAGTGCCA 60.764 66.667 0.00 0.00 0.00 4.92
2278 10612 2.764128 TGGGGGATCGAGAGTGCC 60.764 66.667 0.00 0.00 0.00 5.01
2279 10613 2.501610 GTGGGGGATCGAGAGTGC 59.498 66.667 0.00 0.00 0.00 4.40
2280 10614 1.264749 TTGGTGGGGGATCGAGAGTG 61.265 60.000 0.00 0.00 0.00 3.51
2281 10615 0.546747 TTTGGTGGGGGATCGAGAGT 60.547 55.000 0.00 0.00 0.00 3.24
2282 10616 0.179000 CTTTGGTGGGGGATCGAGAG 59.821 60.000 0.00 0.00 0.00 3.20
2283 10617 1.910580 GCTTTGGTGGGGGATCGAGA 61.911 60.000 0.00 0.00 0.00 4.04
2284 10618 1.452108 GCTTTGGTGGGGGATCGAG 60.452 63.158 0.00 0.00 0.00 4.04
2285 10619 2.674754 GCTTTGGTGGGGGATCGA 59.325 61.111 0.00 0.00 0.00 3.59
2286 10620 2.440247 GGCTTTGGTGGGGGATCG 60.440 66.667 0.00 0.00 0.00 3.69
2287 10621 1.044790 CATGGCTTTGGTGGGGGATC 61.045 60.000 0.00 0.00 0.00 3.36
2288 10622 1.002017 CATGGCTTTGGTGGGGGAT 59.998 57.895 0.00 0.00 0.00 3.85
2289 10623 1.517538 ATCATGGCTTTGGTGGGGGA 61.518 55.000 0.00 0.00 0.00 4.81
2290 10624 0.261402 TATCATGGCTTTGGTGGGGG 59.739 55.000 0.00 0.00 0.00 5.40
2291 10625 2.157640 TTATCATGGCTTTGGTGGGG 57.842 50.000 0.00 0.00 0.00 4.96
2292 10626 3.298619 TGATTATCATGGCTTTGGTGGG 58.701 45.455 0.00 0.00 0.00 4.61
2293 10627 4.831155 AGATGATTATCATGGCTTTGGTGG 59.169 41.667 12.89 0.00 37.20 4.61
2294 10628 6.401047 AAGATGATTATCATGGCTTTGGTG 57.599 37.500 12.89 0.00 37.20 4.17
2295 10629 6.608405 TCAAAGATGATTATCATGGCTTTGGT 59.392 34.615 28.91 9.69 42.63 3.67
2296 10630 7.046292 TCAAAGATGATTATCATGGCTTTGG 57.954 36.000 28.91 19.24 42.63 3.28
2297 10631 8.410912 TCTTCAAAGATGATTATCATGGCTTTG 58.589 33.333 26.52 26.52 43.14 2.77
2298 10632 8.529424 TCTTCAAAGATGATTATCATGGCTTT 57.471 30.769 12.89 12.95 37.20 3.51
2299 10633 7.230913 CCTCTTCAAAGATGATTATCATGGCTT 59.769 37.037 12.89 7.75 37.20 4.35
2300 10634 6.715718 CCTCTTCAAAGATGATTATCATGGCT 59.284 38.462 12.89 1.56 37.20 4.75
2301 10635 6.713903 TCCTCTTCAAAGATGATTATCATGGC 59.286 38.462 12.89 0.00 37.20 4.40
2302 10636 7.937942 AGTCCTCTTCAAAGATGATTATCATGG 59.062 37.037 12.89 4.46 37.20 3.66
2303 10637 8.905660 AGTCCTCTTCAAAGATGATTATCATG 57.094 34.615 12.89 0.00 37.20 3.07
2304 10638 7.871973 CGAGTCCTCTTCAAAGATGATTATCAT 59.128 37.037 7.50 7.50 40.34 2.45
2305 10639 7.068716 TCGAGTCCTCTTCAAAGATGATTATCA 59.931 37.037 0.00 0.00 34.96 2.15
2306 10640 7.381139 GTCGAGTCCTCTTCAAAGATGATTATC 59.619 40.741 1.83 0.00 34.96 1.75
2307 10641 7.206687 GTCGAGTCCTCTTCAAAGATGATTAT 58.793 38.462 1.83 0.00 34.96 1.28
2308 10642 6.405953 GGTCGAGTCCTCTTCAAAGATGATTA 60.406 42.308 1.83 0.00 34.96 1.75
2309 10643 5.415221 GTCGAGTCCTCTTCAAAGATGATT 58.585 41.667 1.83 0.00 34.96 2.57
2310 10644 4.142049 GGTCGAGTCCTCTTCAAAGATGAT 60.142 45.833 1.83 0.00 34.96 2.45
2311 10645 3.193691 GGTCGAGTCCTCTTCAAAGATGA 59.806 47.826 0.00 0.00 33.93 2.92
2312 10646 3.056536 TGGTCGAGTCCTCTTCAAAGATG 60.057 47.826 0.00 0.00 33.93 2.90
2313 10647 3.165875 TGGTCGAGTCCTCTTCAAAGAT 58.834 45.455 0.00 0.00 33.93 2.40
2314 10648 2.594131 TGGTCGAGTCCTCTTCAAAGA 58.406 47.619 0.00 0.00 0.00 2.52
2315 10649 3.386768 TTGGTCGAGTCCTCTTCAAAG 57.613 47.619 0.00 0.00 0.00 2.77
2316 10650 3.830744 TTTGGTCGAGTCCTCTTCAAA 57.169 42.857 0.00 0.00 0.00 2.69
2317 10651 3.323691 TCATTTGGTCGAGTCCTCTTCAA 59.676 43.478 0.00 0.00 0.00 2.69
2318 10652 2.897326 TCATTTGGTCGAGTCCTCTTCA 59.103 45.455 0.00 0.00 0.00 3.02
2319 10653 3.056465 AGTCATTTGGTCGAGTCCTCTTC 60.056 47.826 0.00 0.00 0.00 2.87
2320 10654 2.900546 AGTCATTTGGTCGAGTCCTCTT 59.099 45.455 0.00 0.00 0.00 2.85
2321 10655 2.530701 AGTCATTTGGTCGAGTCCTCT 58.469 47.619 0.00 0.00 0.00 3.69
2322 10656 2.996621 CAAGTCATTTGGTCGAGTCCTC 59.003 50.000 0.00 0.00 32.95 3.71
2323 10657 3.045601 CAAGTCATTTGGTCGAGTCCT 57.954 47.619 0.00 0.00 32.95 3.85
2333 10667 5.872070 GTCCTCTCTTCTACCAAGTCATTTG 59.128 44.000 0.00 0.00 36.50 2.32
2334 10668 5.336849 CGTCCTCTCTTCTACCAAGTCATTT 60.337 44.000 0.00 0.00 0.00 2.32
2335 10669 4.158764 CGTCCTCTCTTCTACCAAGTCATT 59.841 45.833 0.00 0.00 0.00 2.57
2336 10670 3.697045 CGTCCTCTCTTCTACCAAGTCAT 59.303 47.826 0.00 0.00 0.00 3.06
2337 10671 3.082548 CGTCCTCTCTTCTACCAAGTCA 58.917 50.000 0.00 0.00 0.00 3.41
2338 10672 2.159352 GCGTCCTCTCTTCTACCAAGTC 60.159 54.545 0.00 0.00 0.00 3.01
2339 10673 1.819903 GCGTCCTCTCTTCTACCAAGT 59.180 52.381 0.00 0.00 0.00 3.16
2340 10674 1.202200 CGCGTCCTCTCTTCTACCAAG 60.202 57.143 0.00 0.00 0.00 3.61
2341 10675 0.809385 CGCGTCCTCTCTTCTACCAA 59.191 55.000 0.00 0.00 0.00 3.67
2342 10676 0.035725 TCGCGTCCTCTCTTCTACCA 60.036 55.000 5.77 0.00 0.00 3.25
2343 10677 0.377905 GTCGCGTCCTCTCTTCTACC 59.622 60.000 5.77 0.00 0.00 3.18
2344 10678 1.085091 TGTCGCGTCCTCTCTTCTAC 58.915 55.000 5.77 0.00 0.00 2.59
2345 10679 1.941294 GATGTCGCGTCCTCTCTTCTA 59.059 52.381 5.77 0.00 0.00 2.10
2346 10680 0.736053 GATGTCGCGTCCTCTCTTCT 59.264 55.000 5.77 0.00 0.00 2.85
2347 10681 0.452184 TGATGTCGCGTCCTCTCTTC 59.548 55.000 5.77 0.52 0.00 2.87
2348 10682 0.888619 TTGATGTCGCGTCCTCTCTT 59.111 50.000 5.77 0.00 0.00 2.85
2349 10683 0.453793 CTTGATGTCGCGTCCTCTCT 59.546 55.000 5.77 0.00 0.00 3.10
2350 10684 0.452184 TCTTGATGTCGCGTCCTCTC 59.548 55.000 5.77 0.00 0.00 3.20
2351 10685 0.453793 CTCTTGATGTCGCGTCCTCT 59.546 55.000 5.77 0.00 0.00 3.69
2352 10686 1.142778 GCTCTTGATGTCGCGTCCTC 61.143 60.000 5.77 3.53 0.00 3.71
2353 10687 1.153745 GCTCTTGATGTCGCGTCCT 60.154 57.895 5.77 0.00 0.00 3.85
2354 10688 1.014044 TTGCTCTTGATGTCGCGTCC 61.014 55.000 5.77 0.00 0.00 4.79
2355 10689 0.368227 CTTGCTCTTGATGTCGCGTC 59.632 55.000 5.77 0.00 0.00 5.19
2356 10690 0.038251 TCTTGCTCTTGATGTCGCGT 60.038 50.000 5.77 0.00 0.00 6.01
2357 10691 0.644331 CTCTTGCTCTTGATGTCGCG 59.356 55.000 0.00 0.00 0.00 5.87
2358 10692 0.373024 GCTCTTGCTCTTGATGTCGC 59.627 55.000 0.00 0.00 36.03 5.19
2359 10693 1.392853 GTGCTCTTGCTCTTGATGTCG 59.607 52.381 0.00 0.00 40.48 4.35
2360 10694 1.736681 GGTGCTCTTGCTCTTGATGTC 59.263 52.381 0.00 0.00 40.48 3.06
2361 10695 1.818642 GGTGCTCTTGCTCTTGATGT 58.181 50.000 0.00 0.00 40.48 3.06
2362 10696 0.725686 CGGTGCTCTTGCTCTTGATG 59.274 55.000 0.00 0.00 40.48 3.07
2363 10697 0.322975 ACGGTGCTCTTGCTCTTGAT 59.677 50.000 0.00 0.00 40.48 2.57
2364 10698 0.601046 CACGGTGCTCTTGCTCTTGA 60.601 55.000 0.00 0.00 40.48 3.02
2365 10699 0.882042 ACACGGTGCTCTTGCTCTTG 60.882 55.000 8.30 0.00 40.48 3.02
2366 10700 0.882042 CACACGGTGCTCTTGCTCTT 60.882 55.000 8.30 0.00 40.48 2.85
2367 10701 1.301244 CACACGGTGCTCTTGCTCT 60.301 57.895 8.30 0.00 40.48 4.09
2368 10702 0.319555 TACACACGGTGCTCTTGCTC 60.320 55.000 8.30 0.00 40.48 4.26
2369 10703 0.600255 GTACACACGGTGCTCTTGCT 60.600 55.000 8.30 0.00 40.48 3.91
2370 10704 0.878523 TGTACACACGGTGCTCTTGC 60.879 55.000 8.30 0.00 36.98 4.01
2371 10705 0.859232 GTGTACACACGGTGCTCTTG 59.141 55.000 21.14 1.30 36.98 3.02
2372 10706 3.284197 GTGTACACACGGTGCTCTT 57.716 52.632 21.14 0.00 36.98 2.85
2381 10715 1.475280 TCTATGGGCTCGTGTACACAC 59.525 52.381 24.98 13.50 43.15 3.82
2382 10716 1.842052 TCTATGGGCTCGTGTACACA 58.158 50.000 24.98 11.60 0.00 3.72
2383 10717 3.568853 ACTATCTATGGGCTCGTGTACAC 59.431 47.826 16.32 16.32 0.00 2.90
2384 10718 3.828921 ACTATCTATGGGCTCGTGTACA 58.171 45.455 0.00 0.00 0.00 2.90
2385 10719 4.850347 AACTATCTATGGGCTCGTGTAC 57.150 45.455 0.00 0.00 0.00 2.90
2386 10720 5.138276 AGAAACTATCTATGGGCTCGTGTA 58.862 41.667 0.00 0.00 36.32 2.90
2387 10721 3.961408 AGAAACTATCTATGGGCTCGTGT 59.039 43.478 0.00 0.00 36.32 4.49
2388 10722 4.592485 AGAAACTATCTATGGGCTCGTG 57.408 45.455 0.00 0.00 36.32 4.35
2389 10723 4.039366 GGAAGAAACTATCTATGGGCTCGT 59.961 45.833 0.00 0.00 37.42 4.18
2390 10724 4.282195 AGGAAGAAACTATCTATGGGCTCG 59.718 45.833 0.00 0.00 37.42 5.03
2391 10725 5.305644 TGAGGAAGAAACTATCTATGGGCTC 59.694 44.000 0.00 0.00 37.42 4.70
2392 10726 5.219739 TGAGGAAGAAACTATCTATGGGCT 58.780 41.667 0.00 0.00 37.42 5.19
2393 10727 5.552870 TGAGGAAGAAACTATCTATGGGC 57.447 43.478 0.00 0.00 37.42 5.36
2394 10728 8.657387 TCTATGAGGAAGAAACTATCTATGGG 57.343 38.462 0.00 0.00 37.42 4.00
2404 10738 9.943163 GCAAATATCTTTCTATGAGGAAGAAAC 57.057 33.333 1.37 0.00 37.89 2.78
2405 10739 9.685276 TGCAAATATCTTTCTATGAGGAAGAAA 57.315 29.630 1.37 0.00 39.91 2.52
2406 10740 9.685276 TTGCAAATATCTTTCTATGAGGAAGAA 57.315 29.630 0.00 0.00 0.00 2.52
2407 10741 9.685276 TTTGCAAATATCTTTCTATGAGGAAGA 57.315 29.630 8.05 0.00 0.00 2.87
2408 10742 9.727627 GTTTGCAAATATCTTTCTATGAGGAAG 57.272 33.333 16.21 0.00 0.00 3.46
2409 10743 9.241919 TGTTTGCAAATATCTTTCTATGAGGAA 57.758 29.630 16.21 0.00 0.00 3.36
2410 10744 8.806429 TGTTTGCAAATATCTTTCTATGAGGA 57.194 30.769 16.21 0.00 0.00 3.71
2417 10751 9.798994 GAGATGATTGTTTGCAAATATCTTTCT 57.201 29.630 25.10 24.33 39.36 2.52
2418 10752 9.028185 GGAGATGATTGTTTGCAAATATCTTTC 57.972 33.333 25.10 21.87 39.36 2.62
2419 10753 7.703621 CGGAGATGATTGTTTGCAAATATCTTT 59.296 33.333 25.10 17.65 39.36 2.52
2420 10754 7.198390 CGGAGATGATTGTTTGCAAATATCTT 58.802 34.615 25.10 21.48 39.36 2.40
2421 10755 6.238842 CCGGAGATGATTGTTTGCAAATATCT 60.239 38.462 25.10 21.44 40.63 1.98
2422 10756 5.916883 CCGGAGATGATTGTTTGCAAATATC 59.083 40.000 16.21 19.48 38.21 1.63
2423 10757 5.593909 TCCGGAGATGATTGTTTGCAAATAT 59.406 36.000 16.21 11.91 38.21 1.28
2424 10758 4.946772 TCCGGAGATGATTGTTTGCAAATA 59.053 37.500 16.21 10.22 38.21 1.40
2425 10759 3.763360 TCCGGAGATGATTGTTTGCAAAT 59.237 39.130 16.21 0.00 38.21 2.32
2426 10760 3.153130 TCCGGAGATGATTGTTTGCAAA 58.847 40.909 8.05 8.05 38.21 3.68
2427 10761 2.789213 TCCGGAGATGATTGTTTGCAA 58.211 42.857 0.00 0.00 39.16 4.08
2428 10762 2.488204 TCCGGAGATGATTGTTTGCA 57.512 45.000 0.00 0.00 0.00 4.08
2429 10763 3.191371 AGTTTCCGGAGATGATTGTTTGC 59.809 43.478 3.34 0.00 0.00 3.68
2430 10764 4.455533 TCAGTTTCCGGAGATGATTGTTTG 59.544 41.667 3.34 0.00 0.00 2.93
2431 10765 4.651778 TCAGTTTCCGGAGATGATTGTTT 58.348 39.130 3.34 0.00 0.00 2.83
2432 10766 4.286297 TCAGTTTCCGGAGATGATTGTT 57.714 40.909 3.34 0.00 0.00 2.83
2433 10767 3.981071 TCAGTTTCCGGAGATGATTGT 57.019 42.857 3.34 0.00 0.00 2.71
2434 10768 4.142600 GGTTTCAGTTTCCGGAGATGATTG 60.143 45.833 3.34 0.00 0.00 2.67
2435 10769 4.010349 GGTTTCAGTTTCCGGAGATGATT 58.990 43.478 3.34 0.00 0.00 2.57
2436 10770 3.009033 TGGTTTCAGTTTCCGGAGATGAT 59.991 43.478 3.34 0.00 0.00 2.45
2437 10771 2.370519 TGGTTTCAGTTTCCGGAGATGA 59.629 45.455 3.34 7.76 0.00 2.92
2438 10772 2.778299 TGGTTTCAGTTTCCGGAGATG 58.222 47.619 3.34 5.22 0.00 2.90
2439 10773 3.721087 ATGGTTTCAGTTTCCGGAGAT 57.279 42.857 3.34 0.00 0.00 2.75
2440 10774 3.502123 AATGGTTTCAGTTTCCGGAGA 57.498 42.857 3.34 0.00 0.00 3.71
2441 10775 3.364964 CGAAATGGTTTCAGTTTCCGGAG 60.365 47.826 3.34 0.00 39.63 4.63
2442 10776 2.550606 CGAAATGGTTTCAGTTTCCGGA 59.449 45.455 0.00 0.00 39.63 5.14
2443 10777 2.292292 ACGAAATGGTTTCAGTTTCCGG 59.708 45.455 0.00 0.00 39.63 5.14
2444 10778 3.002862 TGACGAAATGGTTTCAGTTTCCG 59.997 43.478 0.00 0.00 39.63 4.30
2445 10779 4.561735 TGACGAAATGGTTTCAGTTTCC 57.438 40.909 0.00 0.00 39.63 3.13
2446 10780 6.695278 TCAAATGACGAAATGGTTTCAGTTTC 59.305 34.615 0.00 0.00 39.63 2.78
2447 10781 6.475402 GTCAAATGACGAAATGGTTTCAGTTT 59.525 34.615 0.00 0.00 39.63 2.66
2448 10782 5.977129 GTCAAATGACGAAATGGTTTCAGTT 59.023 36.000 0.00 0.00 39.63 3.16
2449 10783 5.507315 GGTCAAATGACGAAATGGTTTCAGT 60.507 40.000 7.42 2.53 45.65 3.41
2450 10784 4.917415 GGTCAAATGACGAAATGGTTTCAG 59.083 41.667 7.42 0.00 45.65 3.02
2451 10785 4.339530 TGGTCAAATGACGAAATGGTTTCA 59.660 37.500 7.42 0.00 45.65 2.69
2452 10786 4.865776 TGGTCAAATGACGAAATGGTTTC 58.134 39.130 7.42 0.00 45.65 2.78
2453 10787 4.927978 TGGTCAAATGACGAAATGGTTT 57.072 36.364 7.42 0.00 45.65 3.27
2454 10788 4.927978 TTGGTCAAATGACGAAATGGTT 57.072 36.364 8.30 0.00 45.65 3.67
2455 10789 4.927978 TTTGGTCAAATGACGAAATGGT 57.072 36.364 16.50 0.00 44.10 3.55
2456 10790 4.150451 GCTTTTGGTCAAATGACGAAATGG 59.850 41.667 24.44 19.29 46.68 3.16
2457 10791 4.744137 TGCTTTTGGTCAAATGACGAAATG 59.256 37.500 19.70 20.79 46.68 2.32
2458 10792 4.942852 TGCTTTTGGTCAAATGACGAAAT 58.057 34.783 19.70 0.00 46.68 2.17
2459 10793 4.377839 TGCTTTTGGTCAAATGACGAAA 57.622 36.364 16.50 16.50 46.13 3.46
2460 10794 4.582701 ATGCTTTTGGTCAAATGACGAA 57.417 36.364 6.87 6.87 45.65 3.85
2461 10795 4.278170 AGAATGCTTTTGGTCAAATGACGA 59.722 37.500 7.42 0.79 45.65 4.20
2462 10796 4.549458 AGAATGCTTTTGGTCAAATGACG 58.451 39.130 7.42 0.00 45.65 4.35
2463 10797 5.984926 TGAAGAATGCTTTTGGTCAAATGAC 59.015 36.000 4.96 4.96 38.19 3.06
2464 10798 6.159299 TGAAGAATGCTTTTGGTCAAATGA 57.841 33.333 11.79 0.00 33.61 2.57
2465 10799 6.847956 TTGAAGAATGCTTTTGGTCAAATG 57.152 33.333 0.00 1.58 33.61 2.32
2466 10800 6.822676 TGTTTGAAGAATGCTTTTGGTCAAAT 59.177 30.769 15.56 0.00 33.61 2.32
2467 10801 6.169094 TGTTTGAAGAATGCTTTTGGTCAAA 58.831 32.000 11.58 11.58 33.61 2.69
2468 10802 5.728471 TGTTTGAAGAATGCTTTTGGTCAA 58.272 33.333 0.00 0.00 33.61 3.18
2469 10803 5.126869 TCTGTTTGAAGAATGCTTTTGGTCA 59.873 36.000 0.00 0.00 33.61 4.02
2470 10804 5.591099 TCTGTTTGAAGAATGCTTTTGGTC 58.409 37.500 0.00 0.00 33.61 4.02
2471 10805 5.596836 TCTGTTTGAAGAATGCTTTTGGT 57.403 34.783 0.00 0.00 33.61 3.67
2472 10806 8.767478 AATATCTGTTTGAAGAATGCTTTTGG 57.233 30.769 0.00 0.00 33.61 3.28
2475 10809 8.193438 GCCTAATATCTGTTTGAAGAATGCTTT 58.807 33.333 0.00 0.00 33.61 3.51
2476 10810 7.559170 AGCCTAATATCTGTTTGAAGAATGCTT 59.441 33.333 0.00 0.00 36.96 3.91
2477 10811 7.059156 AGCCTAATATCTGTTTGAAGAATGCT 58.941 34.615 0.00 0.00 0.00 3.79
2478 10812 7.269477 AGCCTAATATCTGTTTGAAGAATGC 57.731 36.000 0.00 0.00 0.00 3.56
2479 10813 8.066595 CGAAGCCTAATATCTGTTTGAAGAATG 58.933 37.037 0.00 0.00 0.00 2.67
2480 10814 7.770897 ACGAAGCCTAATATCTGTTTGAAGAAT 59.229 33.333 0.00 0.00 0.00 2.40
2481 10815 7.103641 ACGAAGCCTAATATCTGTTTGAAGAA 58.896 34.615 0.00 0.00 0.00 2.52
2482 10816 6.640518 ACGAAGCCTAATATCTGTTTGAAGA 58.359 36.000 0.00 0.00 0.00 2.87
2483 10817 6.910536 ACGAAGCCTAATATCTGTTTGAAG 57.089 37.500 0.00 0.00 0.00 3.02
2484 10818 7.389330 TCAAACGAAGCCTAATATCTGTTTGAA 59.611 33.333 13.00 0.57 46.15 2.69
2485 10819 6.876789 TCAAACGAAGCCTAATATCTGTTTGA 59.123 34.615 11.75 11.75 46.63 2.69
2486 10820 7.072177 TCAAACGAAGCCTAATATCTGTTTG 57.928 36.000 7.88 7.88 43.66 2.93
2487 10821 7.681939 TTCAAACGAAGCCTAATATCTGTTT 57.318 32.000 0.00 0.00 0.00 2.83
2488 10822 7.361799 GGTTTCAAACGAAGCCTAATATCTGTT 60.362 37.037 0.00 0.00 39.85 3.16
2489 10823 6.093633 GGTTTCAAACGAAGCCTAATATCTGT 59.906 38.462 0.00 0.00 39.85 3.41
2490 10824 6.458342 GGGTTTCAAACGAAGCCTAATATCTG 60.458 42.308 7.82 0.00 41.97 2.90
2491 10825 5.589050 GGGTTTCAAACGAAGCCTAATATCT 59.411 40.000 7.82 0.00 41.97 1.98
2492 10826 5.355910 TGGGTTTCAAACGAAGCCTAATATC 59.644 40.000 7.82 0.00 41.97 1.63
2493 10827 5.258051 TGGGTTTCAAACGAAGCCTAATAT 58.742 37.500 7.82 0.00 41.97 1.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.