Multiple sequence alignment - TraesCS5B01G432600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G432600 chr5B 100.000 3371 0 0 1 3371 606848411 606851781 0.000000e+00 6226
1 TraesCS5B01G432600 chr5B 94.382 356 19 1 223 577 420054800 420054445 2.290000e-151 545
2 TraesCS5B01G432600 chr5D 93.978 1428 61 10 1328 2744 491792265 491793678 0.000000e+00 2137
3 TraesCS5B01G432600 chr5D 96.491 741 20 3 575 1312 491791541 491792278 0.000000e+00 1219
4 TraesCS5B01G432600 chr5D 99.074 108 1 0 1 108 9238980 9239087 9.540000e-46 195
5 TraesCS5B01G432600 chr5D 94.215 121 7 0 108 228 491791423 491791543 5.740000e-43 185
6 TraesCS5B01G432600 chr5A 87.191 1296 116 25 1400 2672 614363978 614365246 0.000000e+00 1428
7 TraesCS5B01G432600 chr5A 90.836 742 44 11 575 1312 614363182 614363903 0.000000e+00 972
8 TraesCS5B01G432600 chr1B 86.430 958 110 17 1436 2380 100052674 100053624 0.000000e+00 1031
9 TraesCS5B01G432600 chr1B 83.019 636 63 23 687 1302 100044900 100045510 4.950000e-148 534
10 TraesCS5B01G432600 chr1D 84.172 1093 132 30 1442 2507 62794176 62795254 0.000000e+00 1022
11 TraesCS5B01G432600 chr1D 93.193 617 38 4 2756 3371 463250902 463250289 0.000000e+00 904
12 TraesCS5B01G432600 chr1D 83.692 650 58 23 684 1312 62793297 62793919 1.360000e-158 569
13 TraesCS5B01G432600 chr1D 94.915 354 16 2 219 571 470005252 470005604 1.370000e-153 553
14 TraesCS5B01G432600 chr1D 94.199 362 19 1 218 577 427590902 427591263 4.920000e-153 551
15 TraesCS5B01G432600 chr1D 100.000 107 0 0 1 107 345814673 345814567 7.380000e-47 198
16 TraesCS5B01G432600 chr2B 94.481 616 30 4 2756 3371 45153350 45153961 0.000000e+00 946
17 TraesCS5B01G432600 chr1A 84.890 953 123 20 1442 2380 60911109 60912054 0.000000e+00 942
18 TraesCS5B01G432600 chr1A 82.032 679 70 27 647 1312 60910205 60910844 6.400000e-147 531
19 TraesCS5B01G432600 chr1A 79.213 356 43 18 588 931 60875823 60876159 5.660000e-53 219
20 TraesCS5B01G432600 chr1A 99.083 109 0 1 1 108 548226698 548226590 9.540000e-46 195
21 TraesCS5B01G432600 chr4D 93.920 625 30 7 2749 3371 35123708 35124326 0.000000e+00 937
22 TraesCS5B01G432600 chr4D 95.640 344 15 0 228 571 375665348 375665691 1.370000e-153 553
23 TraesCS5B01G432600 chr6D 93.679 617 35 4 2756 3371 449815434 449814821 0.000000e+00 920
24 TraesCS5B01G432600 chr6D 92.357 628 41 7 2747 3371 55883943 55883320 0.000000e+00 887
25 TraesCS5B01G432600 chr6D 95.640 344 15 0 228 571 333398603 333398946 1.370000e-153 553
26 TraesCS5B01G432600 chr6D 99.074 108 1 0 1 108 7411098 7410991 9.540000e-46 195
27 TraesCS5B01G432600 chr6D 99.065 107 1 0 2 108 336480593 336480487 3.430000e-45 193
28 TraesCS5B01G432600 chr6D 98.165 109 2 0 1 109 51496701 51496593 1.230000e-44 191
29 TraesCS5B01G432600 chrUn 93.280 625 37 5 2748 3371 45208438 45207818 0.000000e+00 917
30 TraesCS5B01G432600 chrUn 99.065 107 1 0 1 107 102687660 102687766 3.430000e-45 193
31 TraesCS5B01G432600 chr7D 93.376 619 35 5 2754 3371 509534977 509535590 0.000000e+00 911
32 TraesCS5B01G432600 chr3D 93.065 620 36 7 2755 3371 154426798 154427413 0.000000e+00 900
33 TraesCS5B01G432600 chr3D 92.892 619 38 5 2754 3371 597182187 597182800 0.000000e+00 894
34 TraesCS5B01G432600 chr3D 95.143 350 16 1 223 571 609689328 609689677 4.920000e-153 551
35 TraesCS5B01G432600 chr3D 97.391 115 3 0 1 115 25340356 25340470 2.650000e-46 196
36 TraesCS5B01G432600 chr2D 94.648 355 19 0 226 580 119417797 119417443 4.920000e-153 551
37 TraesCS5B01G432600 chr2D 95.143 350 16 1 223 571 389337453 389337104 4.920000e-153 551
38 TraesCS5B01G432600 chr2D 93.443 366 23 1 206 571 630032559 630032195 2.960000e-150 542
39 TraesCS5B01G432600 chr4B 98.165 109 2 0 1 109 645463131 645463023 1.230000e-44 191


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G432600 chr5B 606848411 606851781 3370 False 6226.000000 6226 100.000000 1 3371 1 chr5B.!!$F1 3370
1 TraesCS5B01G432600 chr5D 491791423 491793678 2255 False 1180.333333 2137 94.894667 108 2744 3 chr5D.!!$F2 2636
2 TraesCS5B01G432600 chr5A 614363182 614365246 2064 False 1200.000000 1428 89.013500 575 2672 2 chr5A.!!$F1 2097
3 TraesCS5B01G432600 chr1B 100052674 100053624 950 False 1031.000000 1031 86.430000 1436 2380 1 chr1B.!!$F2 944
4 TraesCS5B01G432600 chr1B 100044900 100045510 610 False 534.000000 534 83.019000 687 1302 1 chr1B.!!$F1 615
5 TraesCS5B01G432600 chr1D 463250289 463250902 613 True 904.000000 904 93.193000 2756 3371 1 chr1D.!!$R2 615
6 TraesCS5B01G432600 chr1D 62793297 62795254 1957 False 795.500000 1022 83.932000 684 2507 2 chr1D.!!$F3 1823
7 TraesCS5B01G432600 chr2B 45153350 45153961 611 False 946.000000 946 94.481000 2756 3371 1 chr2B.!!$F1 615
8 TraesCS5B01G432600 chr1A 60910205 60912054 1849 False 736.500000 942 83.461000 647 2380 2 chr1A.!!$F2 1733
9 TraesCS5B01G432600 chr4D 35123708 35124326 618 False 937.000000 937 93.920000 2749 3371 1 chr4D.!!$F1 622
10 TraesCS5B01G432600 chr6D 449814821 449815434 613 True 920.000000 920 93.679000 2756 3371 1 chr6D.!!$R5 615
11 TraesCS5B01G432600 chr6D 55883320 55883943 623 True 887.000000 887 92.357000 2747 3371 1 chr6D.!!$R3 624
12 TraesCS5B01G432600 chrUn 45207818 45208438 620 True 917.000000 917 93.280000 2748 3371 1 chrUn.!!$R1 623
13 TraesCS5B01G432600 chr7D 509534977 509535590 613 False 911.000000 911 93.376000 2754 3371 1 chr7D.!!$F1 617
14 TraesCS5B01G432600 chr3D 154426798 154427413 615 False 900.000000 900 93.065000 2755 3371 1 chr3D.!!$F2 616
15 TraesCS5B01G432600 chr3D 597182187 597182800 613 False 894.000000 894 92.892000 2754 3371 1 chr3D.!!$F3 617

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
52 53 0.035439 ATGTAACTCCTGGCCGGTTG 60.035 55.0 11.58 5.12 0.00 3.77 F
303 304 0.036448 CTAGCCTCATCCATGCTGGG 59.964 60.0 0.00 0.00 38.32 4.45 F
307 308 0.037877 CCTCATCCATGCTGGGATCC 59.962 60.0 1.92 1.92 45.91 3.36 F
501 502 0.253327 CCCTCTTTAGTCAGGGGTGC 59.747 60.0 0.00 0.00 45.39 5.01 F
1325 1363 0.399833 TCACATACTGCAAGGTGGCA 59.600 50.0 3.57 0.00 42.53 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1306 1344 0.399833 TGCCACCTTGCAGTATGTGA 59.600 50.000 8.11 0.0 39.31 3.58 R
2109 2362 0.884704 GGTTGCTCAGCTTGTTCGGA 60.885 55.000 0.00 0.0 0.00 4.55 R
2277 2530 1.141657 GCTCCCATCTTCACCATAGCA 59.858 52.381 0.00 0.0 0.00 3.49 R
2325 2578 0.832135 AGACCTTCCTGACTTCGCCA 60.832 55.000 0.00 0.0 0.00 5.69 R
3112 3394 0.101759 CCATACATGGCAACTGCAGC 59.898 55.000 15.27 0.0 41.75 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.634475 CTTTTTCTTTTTCCTCTTGTAAGGTG 57.366 34.615 0.00 0.00 37.69 4.00
26 27 5.767816 TTCTTTTTCCTCTTGTAAGGTGC 57.232 39.130 0.00 0.00 37.69 5.01
27 28 5.048846 TCTTTTTCCTCTTGTAAGGTGCT 57.951 39.130 0.00 0.00 37.69 4.40
28 29 4.821805 TCTTTTTCCTCTTGTAAGGTGCTG 59.178 41.667 0.00 0.00 37.69 4.41
29 30 3.857157 TTTCCTCTTGTAAGGTGCTGT 57.143 42.857 0.00 0.00 37.69 4.40
30 31 3.402628 TTCCTCTTGTAAGGTGCTGTC 57.597 47.619 0.00 0.00 37.69 3.51
31 32 1.623811 TCCTCTTGTAAGGTGCTGTCC 59.376 52.381 0.00 0.00 37.69 4.02
32 33 1.673033 CCTCTTGTAAGGTGCTGTCCG 60.673 57.143 0.00 0.00 0.00 4.79
33 34 1.272490 CTCTTGTAAGGTGCTGTCCGA 59.728 52.381 0.00 0.00 0.00 4.55
34 35 1.899814 TCTTGTAAGGTGCTGTCCGAT 59.100 47.619 0.00 0.00 0.00 4.18
35 36 2.002586 CTTGTAAGGTGCTGTCCGATG 58.997 52.381 0.00 0.00 0.00 3.84
36 37 0.973632 TGTAAGGTGCTGTCCGATGT 59.026 50.000 0.00 0.00 0.00 3.06
37 38 2.172679 TGTAAGGTGCTGTCCGATGTA 58.827 47.619 0.00 0.00 0.00 2.29
38 39 2.563620 TGTAAGGTGCTGTCCGATGTAA 59.436 45.455 0.00 0.00 0.00 2.41
39 40 2.094762 AAGGTGCTGTCCGATGTAAC 57.905 50.000 0.00 0.00 0.00 2.50
40 41 1.267121 AGGTGCTGTCCGATGTAACT 58.733 50.000 0.00 0.00 0.00 2.24
41 42 1.204941 AGGTGCTGTCCGATGTAACTC 59.795 52.381 0.00 0.00 0.00 3.01
42 43 1.641577 GTGCTGTCCGATGTAACTCC 58.358 55.000 0.00 0.00 0.00 3.85
43 44 1.204941 GTGCTGTCCGATGTAACTCCT 59.795 52.381 0.00 0.00 0.00 3.69
44 45 1.204704 TGCTGTCCGATGTAACTCCTG 59.795 52.381 0.00 0.00 0.00 3.86
45 46 1.471676 GCTGTCCGATGTAACTCCTGG 60.472 57.143 0.00 0.00 0.00 4.45
46 47 0.535335 TGTCCGATGTAACTCCTGGC 59.465 55.000 0.00 0.00 0.00 4.85
47 48 0.179081 GTCCGATGTAACTCCTGGCC 60.179 60.000 0.00 0.00 0.00 5.36
48 49 1.227263 CCGATGTAACTCCTGGCCG 60.227 63.158 0.00 0.00 0.00 6.13
49 50 1.227263 CGATGTAACTCCTGGCCGG 60.227 63.158 3.88 3.88 0.00 6.13
50 51 1.905512 GATGTAACTCCTGGCCGGT 59.094 57.895 11.58 0.00 0.00 5.28
51 52 0.252197 GATGTAACTCCTGGCCGGTT 59.748 55.000 11.58 9.38 0.00 4.44
52 53 0.035439 ATGTAACTCCTGGCCGGTTG 60.035 55.000 11.58 5.12 0.00 3.77
53 54 1.122632 TGTAACTCCTGGCCGGTTGA 61.123 55.000 11.58 0.00 0.00 3.18
54 55 0.252197 GTAACTCCTGGCCGGTTGAT 59.748 55.000 11.58 0.00 0.00 2.57
55 56 0.251916 TAACTCCTGGCCGGTTGATG 59.748 55.000 11.58 0.00 0.00 3.07
56 57 2.124570 CTCCTGGCCGGTTGATGG 60.125 66.667 11.58 0.00 0.00 3.51
66 67 3.866883 CCGGTTGATGGCTTTGTTAAT 57.133 42.857 0.00 0.00 0.00 1.40
67 68 4.186856 CCGGTTGATGGCTTTGTTAATT 57.813 40.909 0.00 0.00 0.00 1.40
68 69 4.173256 CCGGTTGATGGCTTTGTTAATTC 58.827 43.478 0.00 0.00 0.00 2.17
69 70 4.321601 CCGGTTGATGGCTTTGTTAATTCA 60.322 41.667 0.00 0.00 0.00 2.57
70 71 5.226396 CGGTTGATGGCTTTGTTAATTCAA 58.774 37.500 0.00 0.00 0.00 2.69
71 72 5.694006 CGGTTGATGGCTTTGTTAATTCAAA 59.306 36.000 0.00 0.00 36.18 2.69
78 79 2.734276 TTGTTAATTCAAAGCCGGGC 57.266 45.000 12.11 12.11 0.00 6.13
79 80 1.917872 TGTTAATTCAAAGCCGGGCT 58.082 45.000 17.69 17.69 42.56 5.19
80 81 1.816224 TGTTAATTCAAAGCCGGGCTC 59.184 47.619 24.08 6.82 38.25 4.70
81 82 2.092323 GTTAATTCAAAGCCGGGCTCT 58.908 47.619 24.08 5.15 38.25 4.09
82 83 2.038387 TAATTCAAAGCCGGGCTCTC 57.962 50.000 24.08 0.00 38.25 3.20
83 84 0.329596 AATTCAAAGCCGGGCTCTCT 59.670 50.000 24.08 3.42 38.25 3.10
84 85 0.107459 ATTCAAAGCCGGGCTCTCTC 60.107 55.000 24.08 0.00 38.25 3.20
85 86 1.194781 TTCAAAGCCGGGCTCTCTCT 61.195 55.000 24.08 2.52 38.25 3.10
86 87 1.153469 CAAAGCCGGGCTCTCTCTC 60.153 63.158 24.08 0.00 38.25 3.20
87 88 2.716017 AAAGCCGGGCTCTCTCTCG 61.716 63.158 24.08 0.00 38.25 4.04
88 89 3.646942 AAGCCGGGCTCTCTCTCGA 62.647 63.158 24.08 0.00 38.25 4.04
89 90 3.591835 GCCGGGCTCTCTCTCGAG 61.592 72.222 12.87 5.93 38.67 4.04
96 97 2.775351 CTCTCTCTCGAGCCTTCGT 58.225 57.895 7.81 0.00 46.72 3.85
97 98 1.091537 CTCTCTCTCGAGCCTTCGTT 58.908 55.000 7.81 0.00 46.72 3.85
98 99 1.063469 CTCTCTCTCGAGCCTTCGTTC 59.937 57.143 7.81 0.00 46.72 3.95
99 100 1.091537 CTCTCTCGAGCCTTCGTTCT 58.908 55.000 7.81 0.00 46.72 3.01
100 101 2.093606 TCTCTCTCGAGCCTTCGTTCTA 60.094 50.000 7.81 0.00 46.72 2.10
101 102 2.678836 CTCTCTCGAGCCTTCGTTCTAA 59.321 50.000 7.81 0.00 46.72 2.10
102 103 3.079578 TCTCTCGAGCCTTCGTTCTAAA 58.920 45.455 7.81 0.00 46.72 1.85
103 104 3.504906 TCTCTCGAGCCTTCGTTCTAAAA 59.495 43.478 7.81 0.00 46.72 1.52
104 105 4.022589 TCTCTCGAGCCTTCGTTCTAAAAA 60.023 41.667 7.81 0.00 46.72 1.94
128 129 6.840780 AAAGGGACTGACTTTAATCATTGG 57.159 37.500 0.00 0.00 40.86 3.16
179 180 2.073816 GTGGGAGTGTTAACATGGTCG 58.926 52.381 12.26 0.00 0.00 4.79
181 182 2.073816 GGGAGTGTTAACATGGTCGTG 58.926 52.381 12.26 0.00 0.00 4.35
196 197 3.071479 GGTCGTGAACAAAGCTGGAATA 58.929 45.455 0.00 0.00 0.00 1.75
200 201 3.906008 CGTGAACAAAGCTGGAATAAACG 59.094 43.478 0.00 0.00 0.00 3.60
210 211 3.063588 GCTGGAATAAACGCCTAACTCAC 59.936 47.826 0.00 0.00 0.00 3.51
215 216 1.223187 AAACGCCTAACTCACCAACG 58.777 50.000 0.00 0.00 0.00 4.10
225 226 2.736347 ACTCACCAACGTAGCTAGGAT 58.264 47.619 19.82 5.37 0.00 3.24
226 227 3.097614 ACTCACCAACGTAGCTAGGATT 58.902 45.455 19.82 7.74 0.00 3.01
227 228 4.275810 ACTCACCAACGTAGCTAGGATTA 58.724 43.478 19.82 0.00 0.00 1.75
228 229 4.338682 ACTCACCAACGTAGCTAGGATTAG 59.661 45.833 19.82 9.88 0.00 1.73
229 230 4.529897 TCACCAACGTAGCTAGGATTAGA 58.470 43.478 19.82 8.02 0.00 2.10
230 231 4.579340 TCACCAACGTAGCTAGGATTAGAG 59.421 45.833 19.82 5.56 0.00 2.43
231 232 3.890147 ACCAACGTAGCTAGGATTAGAGG 59.110 47.826 19.82 12.66 0.00 3.69
232 233 3.256136 CCAACGTAGCTAGGATTAGAGGG 59.744 52.174 19.82 2.00 0.00 4.30
233 234 3.880168 ACGTAGCTAGGATTAGAGGGT 57.120 47.619 19.82 0.00 0.00 4.34
234 235 3.488363 ACGTAGCTAGGATTAGAGGGTG 58.512 50.000 19.82 0.00 0.00 4.61
235 236 3.117587 ACGTAGCTAGGATTAGAGGGTGT 60.118 47.826 19.82 0.00 0.00 4.16
236 237 3.890147 CGTAGCTAGGATTAGAGGGTGTT 59.110 47.826 7.70 0.00 0.00 3.32
237 238 4.341520 CGTAGCTAGGATTAGAGGGTGTTT 59.658 45.833 7.70 0.00 0.00 2.83
238 239 4.762289 AGCTAGGATTAGAGGGTGTTTG 57.238 45.455 0.00 0.00 0.00 2.93
239 240 3.456277 AGCTAGGATTAGAGGGTGTTTGG 59.544 47.826 0.00 0.00 0.00 3.28
240 241 3.454812 GCTAGGATTAGAGGGTGTTTGGA 59.545 47.826 0.00 0.00 0.00 3.53
241 242 4.103311 GCTAGGATTAGAGGGTGTTTGGAT 59.897 45.833 0.00 0.00 0.00 3.41
242 243 5.307196 GCTAGGATTAGAGGGTGTTTGGATA 59.693 44.000 0.00 0.00 0.00 2.59
243 244 5.632034 AGGATTAGAGGGTGTTTGGATAC 57.368 43.478 0.00 0.00 0.00 2.24
244 245 4.101119 AGGATTAGAGGGTGTTTGGATACG 59.899 45.833 0.00 0.00 42.51 3.06
245 246 4.141779 GGATTAGAGGGTGTTTGGATACGT 60.142 45.833 0.00 0.00 42.51 3.57
246 247 4.895668 TTAGAGGGTGTTTGGATACGTT 57.104 40.909 0.00 0.00 42.51 3.99
247 248 3.782656 AGAGGGTGTTTGGATACGTTT 57.217 42.857 0.00 0.00 42.51 3.60
248 249 4.094830 AGAGGGTGTTTGGATACGTTTT 57.905 40.909 0.00 0.00 42.51 2.43
249 250 5.231702 AGAGGGTGTTTGGATACGTTTTA 57.768 39.130 0.00 0.00 42.51 1.52
250 251 5.243207 AGAGGGTGTTTGGATACGTTTTAG 58.757 41.667 0.00 0.00 42.51 1.85
251 252 4.976864 AGGGTGTTTGGATACGTTTTAGT 58.023 39.130 0.00 0.00 42.51 2.24
252 253 4.999311 AGGGTGTTTGGATACGTTTTAGTC 59.001 41.667 0.00 0.00 42.51 2.59
253 254 4.154737 GGGTGTTTGGATACGTTTTAGTCC 59.845 45.833 0.00 0.00 42.51 3.85
254 255 4.154737 GGTGTTTGGATACGTTTTAGTCCC 59.845 45.833 0.00 0.00 42.51 4.46
255 256 4.756135 GTGTTTGGATACGTTTTAGTCCCA 59.244 41.667 0.00 0.00 42.51 4.37
256 257 5.413523 GTGTTTGGATACGTTTTAGTCCCAT 59.586 40.000 0.00 0.00 42.51 4.00
257 258 5.413213 TGTTTGGATACGTTTTAGTCCCATG 59.587 40.000 0.00 0.00 42.51 3.66
258 259 5.423704 TTGGATACGTTTTAGTCCCATGA 57.576 39.130 0.00 0.00 42.51 3.07
259 260 4.761975 TGGATACGTTTTAGTCCCATGAC 58.238 43.478 0.00 0.00 40.25 3.06
261 262 5.657745 TGGATACGTTTTAGTCCCATGACTA 59.342 40.000 0.00 0.00 45.97 2.59
272 273 4.514401 GTCCCATGACTAAAAGTAGTGGG 58.486 47.826 17.22 17.22 46.41 4.61
275 276 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
276 277 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
277 278 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
278 279 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
279 280 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
280 281 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
281 282 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
282 283 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
283 284 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
284 285 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
285 286 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
286 287 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
287 288 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
288 289 3.676093 AGTGGGACTAAAACTTGCTAGC 58.324 45.455 8.10 8.10 0.00 3.42
289 290 2.747989 GTGGGACTAAAACTTGCTAGCC 59.252 50.000 13.29 0.00 0.00 3.93
290 291 2.642807 TGGGACTAAAACTTGCTAGCCT 59.357 45.455 13.29 0.00 0.00 4.58
291 292 3.271729 GGGACTAAAACTTGCTAGCCTC 58.728 50.000 13.29 0.00 0.00 4.70
292 293 3.307480 GGGACTAAAACTTGCTAGCCTCA 60.307 47.826 13.29 0.00 0.00 3.86
293 294 4.518249 GGACTAAAACTTGCTAGCCTCAT 58.482 43.478 13.29 0.00 0.00 2.90
294 295 4.572795 GGACTAAAACTTGCTAGCCTCATC 59.427 45.833 13.29 0.00 0.00 2.92
295 296 4.518249 ACTAAAACTTGCTAGCCTCATCC 58.482 43.478 13.29 0.00 0.00 3.51
296 297 3.439857 AAAACTTGCTAGCCTCATCCA 57.560 42.857 13.29 0.00 0.00 3.41
297 298 3.659183 AAACTTGCTAGCCTCATCCAT 57.341 42.857 13.29 0.00 0.00 3.41
298 299 2.634815 ACTTGCTAGCCTCATCCATG 57.365 50.000 13.29 0.00 0.00 3.66
299 300 1.236628 CTTGCTAGCCTCATCCATGC 58.763 55.000 13.29 0.00 0.00 4.06
300 301 0.841961 TTGCTAGCCTCATCCATGCT 59.158 50.000 13.29 0.00 39.10 3.79
301 302 0.108019 TGCTAGCCTCATCCATGCTG 59.892 55.000 13.29 0.00 36.57 4.41
302 303 0.605860 GCTAGCCTCATCCATGCTGG 60.606 60.000 2.29 0.00 39.43 4.85
303 304 0.036448 CTAGCCTCATCCATGCTGGG 59.964 60.000 0.00 0.00 38.32 4.45
304 305 0.400381 TAGCCTCATCCATGCTGGGA 60.400 55.000 0.00 0.00 42.21 4.37
306 307 0.608582 GCCTCATCCATGCTGGGATC 60.609 60.000 6.73 0.00 45.91 3.36
307 308 0.037877 CCTCATCCATGCTGGGATCC 59.962 60.000 1.92 1.92 45.91 3.36
308 309 0.769247 CTCATCCATGCTGGGATCCA 59.231 55.000 15.23 0.00 45.91 3.41
309 310 1.144298 CTCATCCATGCTGGGATCCAA 59.856 52.381 15.23 0.00 45.91 3.53
310 311 1.570024 TCATCCATGCTGGGATCCAAA 59.430 47.619 15.23 0.00 45.91 3.28
311 312 2.178325 TCATCCATGCTGGGATCCAAAT 59.822 45.455 15.23 0.00 45.91 2.32
312 313 3.398629 TCATCCATGCTGGGATCCAAATA 59.601 43.478 15.23 0.00 45.91 1.40
313 314 3.228188 TCCATGCTGGGATCCAAATAC 57.772 47.619 15.23 0.00 38.32 1.89
314 315 2.785269 TCCATGCTGGGATCCAAATACT 59.215 45.455 15.23 0.00 38.32 2.12
315 316 3.980022 TCCATGCTGGGATCCAAATACTA 59.020 43.478 15.23 0.00 38.32 1.82
316 317 4.415179 TCCATGCTGGGATCCAAATACTAA 59.585 41.667 15.23 0.00 38.32 2.24
317 318 5.103728 TCCATGCTGGGATCCAAATACTAAA 60.104 40.000 15.23 0.00 38.32 1.85
318 319 5.776716 CCATGCTGGGATCCAAATACTAAAT 59.223 40.000 15.23 0.00 32.67 1.40
319 320 6.071728 CCATGCTGGGATCCAAATACTAAATC 60.072 42.308 15.23 0.00 32.67 2.17
320 321 5.063204 TGCTGGGATCCAAATACTAAATCG 58.937 41.667 15.23 0.00 30.80 3.34
321 322 5.163248 TGCTGGGATCCAAATACTAAATCGA 60.163 40.000 15.23 0.00 30.80 3.59
322 323 5.179555 GCTGGGATCCAAATACTAAATCGAC 59.820 44.000 15.23 0.00 30.80 4.20
323 324 6.494666 TGGGATCCAAATACTAAATCGACT 57.505 37.500 15.23 0.00 0.00 4.18
324 325 7.606135 TGGGATCCAAATACTAAATCGACTA 57.394 36.000 15.23 0.00 0.00 2.59
325 326 8.025270 TGGGATCCAAATACTAAATCGACTAA 57.975 34.615 15.23 0.00 0.00 2.24
326 327 8.487848 TGGGATCCAAATACTAAATCGACTAAA 58.512 33.333 15.23 0.00 0.00 1.85
327 328 9.333724 GGGATCCAAATACTAAATCGACTAAAA 57.666 33.333 15.23 0.00 0.00 1.52
341 342 9.774742 AAATCGACTAAAATCAAGTTAATGAGC 57.225 29.630 0.00 0.00 31.76 4.26
342 343 7.899178 TCGACTAAAATCAAGTTAATGAGCA 57.101 32.000 0.00 0.00 31.76 4.26
343 344 8.492673 TCGACTAAAATCAAGTTAATGAGCAT 57.507 30.769 0.00 0.00 31.76 3.79
344 345 8.946085 TCGACTAAAATCAAGTTAATGAGCATT 58.054 29.630 0.97 0.97 31.76 3.56
345 346 9.559958 CGACTAAAATCAAGTTAATGAGCATTT 57.440 29.630 0.52 0.00 31.76 2.32
356 357 9.866655 AAGTTAATGAGCATTTATTATCCTCCA 57.133 29.630 0.52 0.00 32.50 3.86
357 358 9.866655 AGTTAATGAGCATTTATTATCCTCCAA 57.133 29.630 0.52 0.00 32.50 3.53
360 361 8.773033 AATGAGCATTTATTATCCTCCAAACT 57.227 30.769 0.00 0.00 0.00 2.66
361 362 7.807977 TGAGCATTTATTATCCTCCAAACTC 57.192 36.000 0.00 0.00 0.00 3.01
362 363 7.577303 TGAGCATTTATTATCCTCCAAACTCT 58.423 34.615 0.00 0.00 0.00 3.24
363 364 8.055181 TGAGCATTTATTATCCTCCAAACTCTT 58.945 33.333 0.00 0.00 0.00 2.85
364 365 8.457238 AGCATTTATTATCCTCCAAACTCTTC 57.543 34.615 0.00 0.00 0.00 2.87
365 366 8.055181 AGCATTTATTATCCTCCAAACTCTTCA 58.945 33.333 0.00 0.00 0.00 3.02
366 367 8.686334 GCATTTATTATCCTCCAAACTCTTCAA 58.314 33.333 0.00 0.00 0.00 2.69
369 370 8.980481 TTATTATCCTCCAAACTCTTCAATCC 57.020 34.615 0.00 0.00 0.00 3.01
370 371 4.934797 ATCCTCCAAACTCTTCAATCCA 57.065 40.909 0.00 0.00 0.00 3.41
371 372 4.292186 TCCTCCAAACTCTTCAATCCAG 57.708 45.455 0.00 0.00 0.00 3.86
372 373 3.909995 TCCTCCAAACTCTTCAATCCAGA 59.090 43.478 0.00 0.00 0.00 3.86
373 374 4.350816 TCCTCCAAACTCTTCAATCCAGAA 59.649 41.667 0.00 0.00 0.00 3.02
374 375 4.457257 CCTCCAAACTCTTCAATCCAGAAC 59.543 45.833 0.00 0.00 0.00 3.01
375 376 5.310409 TCCAAACTCTTCAATCCAGAACT 57.690 39.130 0.00 0.00 0.00 3.01
376 377 5.308825 TCCAAACTCTTCAATCCAGAACTC 58.691 41.667 0.00 0.00 0.00 3.01
377 378 4.153117 CCAAACTCTTCAATCCAGAACTCG 59.847 45.833 0.00 0.00 0.00 4.18
378 379 2.966050 ACTCTTCAATCCAGAACTCGC 58.034 47.619 0.00 0.00 0.00 5.03
379 380 2.275318 CTCTTCAATCCAGAACTCGCC 58.725 52.381 0.00 0.00 0.00 5.54
380 381 1.902508 TCTTCAATCCAGAACTCGCCT 59.097 47.619 0.00 0.00 0.00 5.52
381 382 2.005451 CTTCAATCCAGAACTCGCCTG 58.995 52.381 0.00 0.00 0.00 4.85
382 383 0.976641 TCAATCCAGAACTCGCCTGT 59.023 50.000 0.00 0.00 0.00 4.00
383 384 1.081892 CAATCCAGAACTCGCCTGTG 58.918 55.000 0.00 0.00 0.00 3.66
384 385 0.687354 AATCCAGAACTCGCCTGTGT 59.313 50.000 0.00 0.00 0.00 3.72
385 386 0.687354 ATCCAGAACTCGCCTGTGTT 59.313 50.000 0.00 0.00 34.68 3.32
386 387 1.334160 TCCAGAACTCGCCTGTGTTA 58.666 50.000 0.00 0.00 32.29 2.41
387 388 1.689813 TCCAGAACTCGCCTGTGTTAA 59.310 47.619 0.00 0.00 32.29 2.01
388 389 2.103432 TCCAGAACTCGCCTGTGTTAAA 59.897 45.455 0.00 0.00 32.29 1.52
389 390 2.480419 CCAGAACTCGCCTGTGTTAAAG 59.520 50.000 0.00 0.00 32.29 1.85
390 391 2.096218 CAGAACTCGCCTGTGTTAAAGC 60.096 50.000 0.00 0.00 32.29 3.51
391 392 1.871039 GAACTCGCCTGTGTTAAAGCA 59.129 47.619 0.00 0.00 32.29 3.91
392 393 1.512926 ACTCGCCTGTGTTAAAGCAG 58.487 50.000 0.00 1.69 0.00 4.24
393 394 1.070134 ACTCGCCTGTGTTAAAGCAGA 59.930 47.619 8.58 0.00 34.87 4.26
394 395 2.289694 ACTCGCCTGTGTTAAAGCAGAT 60.290 45.455 8.58 0.00 34.87 2.90
395 396 2.076100 TCGCCTGTGTTAAAGCAGATG 58.924 47.619 8.58 2.48 34.87 2.90
396 397 2.076100 CGCCTGTGTTAAAGCAGATGA 58.924 47.619 8.58 0.00 34.87 2.92
397 398 2.094894 CGCCTGTGTTAAAGCAGATGAG 59.905 50.000 8.58 0.00 34.87 2.90
398 399 3.077359 GCCTGTGTTAAAGCAGATGAGT 58.923 45.455 8.58 0.00 34.87 3.41
399 400 3.503748 GCCTGTGTTAAAGCAGATGAGTT 59.496 43.478 8.58 0.00 34.87 3.01
400 401 4.695455 GCCTGTGTTAAAGCAGATGAGTTA 59.305 41.667 8.58 0.00 34.87 2.24
401 402 5.181245 GCCTGTGTTAAAGCAGATGAGTTAA 59.819 40.000 8.58 0.00 34.87 2.01
402 403 6.293955 GCCTGTGTTAAAGCAGATGAGTTAAA 60.294 38.462 8.58 0.00 34.87 1.52
403 404 7.575720 GCCTGTGTTAAAGCAGATGAGTTAAAT 60.576 37.037 8.58 0.00 34.87 1.40
404 405 7.752239 CCTGTGTTAAAGCAGATGAGTTAAATG 59.248 37.037 8.58 0.00 34.87 2.32
405 406 8.389779 TGTGTTAAAGCAGATGAGTTAAATGA 57.610 30.769 0.00 0.00 0.00 2.57
406 407 8.506437 TGTGTTAAAGCAGATGAGTTAAATGAG 58.494 33.333 0.00 0.00 0.00 2.90
407 408 8.721478 GTGTTAAAGCAGATGAGTTAAATGAGA 58.279 33.333 0.00 0.00 0.00 3.27
408 409 9.283768 TGTTAAAGCAGATGAGTTAAATGAGAA 57.716 29.630 0.00 0.00 0.00 2.87
409 410 9.766277 GTTAAAGCAGATGAGTTAAATGAGAAG 57.234 33.333 0.00 0.00 0.00 2.85
410 411 9.725019 TTAAAGCAGATGAGTTAAATGAGAAGA 57.275 29.630 0.00 0.00 0.00 2.87
411 412 7.846644 AAGCAGATGAGTTAAATGAGAAGAG 57.153 36.000 0.00 0.00 0.00 2.85
412 413 7.180322 AGCAGATGAGTTAAATGAGAAGAGA 57.820 36.000 0.00 0.00 0.00 3.10
413 414 7.267128 AGCAGATGAGTTAAATGAGAAGAGAG 58.733 38.462 0.00 0.00 0.00 3.20
414 415 7.123997 AGCAGATGAGTTAAATGAGAAGAGAGA 59.876 37.037 0.00 0.00 0.00 3.10
415 416 7.436080 GCAGATGAGTTAAATGAGAAGAGAGAG 59.564 40.741 0.00 0.00 0.00 3.20
416 417 7.922278 CAGATGAGTTAAATGAGAAGAGAGAGG 59.078 40.741 0.00 0.00 0.00 3.69
417 418 7.838696 AGATGAGTTAAATGAGAAGAGAGAGGA 59.161 37.037 0.00 0.00 0.00 3.71
418 419 7.164230 TGAGTTAAATGAGAAGAGAGAGGAC 57.836 40.000 0.00 0.00 0.00 3.85
419 420 6.951198 TGAGTTAAATGAGAAGAGAGAGGACT 59.049 38.462 0.00 0.00 0.00 3.85
420 421 8.110271 TGAGTTAAATGAGAAGAGAGAGGACTA 58.890 37.037 0.00 0.00 0.00 2.59
421 422 8.887264 AGTTAAATGAGAAGAGAGAGGACTAA 57.113 34.615 0.00 0.00 0.00 2.24
422 423 9.487442 AGTTAAATGAGAAGAGAGAGGACTAAT 57.513 33.333 0.00 0.00 0.00 1.73
427 428 8.830915 ATGAGAAGAGAGAGGACTAATTTACA 57.169 34.615 0.00 0.00 0.00 2.41
428 429 8.830915 TGAGAAGAGAGAGGACTAATTTACAT 57.169 34.615 0.00 0.00 0.00 2.29
429 430 9.261035 TGAGAAGAGAGAGGACTAATTTACATT 57.739 33.333 0.00 0.00 0.00 2.71
439 440 9.557061 GAGGACTAATTTACATTTTAGTAGGGG 57.443 37.037 0.00 0.00 38.45 4.79
440 441 9.065722 AGGACTAATTTACATTTTAGTAGGGGT 57.934 33.333 0.00 0.00 38.45 4.95
484 485 4.505808 GTCTCAAGACTAGTTTTAGCCCC 58.494 47.826 0.00 0.00 41.65 5.80
485 486 4.223255 GTCTCAAGACTAGTTTTAGCCCCT 59.777 45.833 0.00 0.00 41.65 4.79
486 487 4.466726 TCTCAAGACTAGTTTTAGCCCCTC 59.533 45.833 0.00 0.00 0.00 4.30
487 488 4.426704 TCAAGACTAGTTTTAGCCCCTCT 58.573 43.478 0.00 0.00 0.00 3.69
488 489 4.844655 TCAAGACTAGTTTTAGCCCCTCTT 59.155 41.667 0.00 0.00 0.00 2.85
489 490 5.309806 TCAAGACTAGTTTTAGCCCCTCTTT 59.690 40.000 0.00 0.00 0.00 2.52
490 491 6.499350 TCAAGACTAGTTTTAGCCCCTCTTTA 59.501 38.462 0.00 0.00 0.00 1.85
491 492 6.547930 AGACTAGTTTTAGCCCCTCTTTAG 57.452 41.667 0.00 0.00 0.00 1.85
492 493 6.024247 AGACTAGTTTTAGCCCCTCTTTAGT 58.976 40.000 0.00 0.00 0.00 2.24
493 494 6.154877 AGACTAGTTTTAGCCCCTCTTTAGTC 59.845 42.308 0.00 0.00 36.42 2.59
494 495 5.783875 ACTAGTTTTAGCCCCTCTTTAGTCA 59.216 40.000 0.00 0.00 0.00 3.41
495 496 5.167303 AGTTTTAGCCCCTCTTTAGTCAG 57.833 43.478 0.00 0.00 0.00 3.51
496 497 4.019231 AGTTTTAGCCCCTCTTTAGTCAGG 60.019 45.833 0.00 0.00 0.00 3.86
501 502 0.253327 CCCTCTTTAGTCAGGGGTGC 59.747 60.000 0.00 0.00 45.39 5.01
502 503 1.280457 CCTCTTTAGTCAGGGGTGCT 58.720 55.000 0.00 0.00 28.24 4.40
503 504 1.630878 CCTCTTTAGTCAGGGGTGCTT 59.369 52.381 0.00 0.00 28.24 3.91
504 505 2.616510 CCTCTTTAGTCAGGGGTGCTTG 60.617 54.545 0.00 0.00 28.24 4.01
505 506 2.303022 CTCTTTAGTCAGGGGTGCTTGA 59.697 50.000 0.00 0.00 0.00 3.02
506 507 2.708861 TCTTTAGTCAGGGGTGCTTGAA 59.291 45.455 0.00 0.00 0.00 2.69
507 508 3.137544 TCTTTAGTCAGGGGTGCTTGAAA 59.862 43.478 0.00 0.00 0.00 2.69
508 509 2.561478 TAGTCAGGGGTGCTTGAAAC 57.439 50.000 0.00 0.00 0.00 2.78
509 510 0.846693 AGTCAGGGGTGCTTGAAACT 59.153 50.000 0.00 0.00 0.00 2.66
510 511 1.215423 AGTCAGGGGTGCTTGAAACTT 59.785 47.619 0.00 0.00 0.00 2.66
511 512 2.031870 GTCAGGGGTGCTTGAAACTTT 58.968 47.619 0.00 0.00 0.00 2.66
512 513 3.117663 AGTCAGGGGTGCTTGAAACTTTA 60.118 43.478 0.00 0.00 0.00 1.85
513 514 3.253432 GTCAGGGGTGCTTGAAACTTTAG 59.747 47.826 0.00 0.00 0.00 1.85
514 515 2.029918 CAGGGGTGCTTGAAACTTTAGC 60.030 50.000 0.00 0.00 35.50 3.09
515 516 1.272490 GGGGTGCTTGAAACTTTAGCC 59.728 52.381 0.00 0.00 34.03 3.93
516 517 2.239400 GGGTGCTTGAAACTTTAGCCT 58.761 47.619 0.00 0.00 34.03 4.58
517 518 2.229062 GGGTGCTTGAAACTTTAGCCTC 59.771 50.000 0.00 0.00 34.03 4.70
518 519 3.149981 GGTGCTTGAAACTTTAGCCTCT 58.850 45.455 0.00 0.00 34.03 3.69
519 520 3.570125 GGTGCTTGAAACTTTAGCCTCTT 59.430 43.478 0.00 0.00 34.03 2.85
520 521 4.760204 GGTGCTTGAAACTTTAGCCTCTTA 59.240 41.667 0.00 0.00 34.03 2.10
521 522 5.240844 GGTGCTTGAAACTTTAGCCTCTTAA 59.759 40.000 0.00 0.00 34.03 1.85
522 523 6.238925 GGTGCTTGAAACTTTAGCCTCTTAAA 60.239 38.462 0.00 0.00 34.03 1.52
523 524 6.858478 GTGCTTGAAACTTTAGCCTCTTAAAG 59.142 38.462 4.46 4.46 43.21 1.85
524 525 6.770785 TGCTTGAAACTTTAGCCTCTTAAAGA 59.229 34.615 11.30 0.00 41.17 2.52
525 526 7.041098 TGCTTGAAACTTTAGCCTCTTAAAGAG 60.041 37.037 11.30 0.56 41.17 2.85
526 527 7.173390 GCTTGAAACTTTAGCCTCTTAAAGAGA 59.827 37.037 11.30 0.00 45.07 3.10
527 528 7.964604 TGAAACTTTAGCCTCTTAAAGAGAC 57.035 36.000 11.30 0.00 45.07 3.36
528 529 7.736893 TGAAACTTTAGCCTCTTAAAGAGACT 58.263 34.615 11.30 1.37 45.07 3.24
529 530 8.867097 TGAAACTTTAGCCTCTTAAAGAGACTA 58.133 33.333 11.30 0.40 45.07 2.59
530 531 9.878667 GAAACTTTAGCCTCTTAAAGAGACTAT 57.121 33.333 11.30 0.00 45.07 2.12
538 539 9.878667 AGCCTCTTAAAGAGACTATTTTTAGTC 57.121 33.333 0.00 5.24 45.07 2.59
539 540 9.654663 GCCTCTTAAAGAGACTATTTTTAGTCA 57.345 33.333 13.86 0.00 45.07 3.41
558 559 9.720769 TTTAGTCAGACTAAAATAAGTCCCTTG 57.279 33.333 26.93 0.00 44.84 3.61
559 560 6.712276 AGTCAGACTAAAATAAGTCCCTTGG 58.288 40.000 0.00 0.00 45.86 3.61
560 561 6.500751 AGTCAGACTAAAATAAGTCCCTTGGA 59.499 38.462 0.00 0.00 45.86 3.53
561 562 7.182930 AGTCAGACTAAAATAAGTCCCTTGGAT 59.817 37.037 0.00 0.00 45.86 3.41
562 563 7.496263 GTCAGACTAAAATAAGTCCCTTGGATC 59.504 40.741 0.00 0.00 45.86 3.36
563 564 6.768381 CAGACTAAAATAAGTCCCTTGGATCC 59.232 42.308 4.20 4.20 45.86 3.36
564 565 6.447084 AGACTAAAATAAGTCCCTTGGATCCA 59.553 38.462 11.44 11.44 45.86 3.41
565 566 7.036863 AGACTAAAATAAGTCCCTTGGATCCAA 60.037 37.037 25.53 25.53 45.86 3.53
566 567 7.283354 GACTAAAATAAGTCCCTTGGATCCAAG 59.717 40.741 37.68 37.68 42.72 3.61
609 610 3.679389 ACATAGTTCAAGCCCAAGAGTG 58.321 45.455 0.00 0.00 0.00 3.51
625 627 2.173569 AGAGTGAAATATGCTGTCCCCC 59.826 50.000 0.00 0.00 0.00 5.40
838 841 5.791974 CGAATTCTTTGTATGCACTGAACTG 59.208 40.000 3.52 0.00 0.00 3.16
844 847 2.799978 TGTATGCACTGAACTGAACACG 59.200 45.455 0.00 0.00 0.00 4.49
858 866 1.393883 GAACACGCTAGCTAACAAGGC 59.606 52.381 13.93 0.00 0.00 4.35
966 992 7.123997 TCTCTCTGCAAGTCTCTTTCATTAGAT 59.876 37.037 0.00 0.00 33.76 1.98
994 1020 4.318546 GCAAACAGTAGTACGTGAACAAGG 60.319 45.833 0.00 0.00 0.00 3.61
1237 1274 4.081862 TCAGGGTACGTACCTCAATGAAAG 60.082 45.833 36.70 18.88 45.72 2.62
1320 1358 6.682423 TTTCATATGTCACATACTGCAAGG 57.318 37.500 0.00 0.00 39.30 3.61
1321 1359 5.357742 TCATATGTCACATACTGCAAGGT 57.642 39.130 0.00 0.00 39.30 3.50
1322 1360 5.118286 TCATATGTCACATACTGCAAGGTG 58.882 41.667 0.00 0.00 39.30 4.00
1323 1361 2.183478 TGTCACATACTGCAAGGTGG 57.817 50.000 3.57 0.00 39.30 4.61
1324 1362 0.804989 GTCACATACTGCAAGGTGGC 59.195 55.000 3.57 0.00 39.30 5.01
1325 1363 0.399833 TCACATACTGCAAGGTGGCA 59.600 50.000 3.57 0.00 42.53 4.92
1395 1439 5.823045 CCCTTGTATCCCTTCTTGAATACAC 59.177 44.000 0.00 0.00 0.00 2.90
1755 2007 1.675310 CGACATCCTGGCCTTTGCA 60.675 57.895 3.32 0.00 40.13 4.08
1782 2034 2.044352 TCCATCGTCGCCTCAGGA 60.044 61.111 0.00 0.00 0.00 3.86
1866 2118 2.703362 CCAAGGCATCCCATCCCCA 61.703 63.158 0.00 0.00 0.00 4.96
1878 2130 1.481871 CATCCCCAGCATTTCAGCTT 58.518 50.000 0.00 0.00 43.70 3.74
1920 2172 2.978010 ACCAAAGGCCTCAACGCG 60.978 61.111 5.23 3.53 0.00 6.01
2019 2272 2.099263 CACCGTCGACTCCACTATGAAT 59.901 50.000 14.70 0.00 0.00 2.57
2297 2550 1.141657 TGCTATGGTGAAGATGGGAGC 59.858 52.381 0.00 0.00 0.00 4.70
2361 2614 0.537143 TCTGCTTCGCCACCAACAAT 60.537 50.000 0.00 0.00 0.00 2.71
2431 2700 5.779922 CAGCTACAACTTGTGGACTTAGTA 58.220 41.667 9.34 0.00 29.57 1.82
2534 2803 6.534793 AGTTGCTTTTGTTAACAACATTCTGG 59.465 34.615 20.43 3.73 43.74 3.86
2580 2850 5.872070 CCTGAAGATCGCTCTACTTTTCTTT 59.128 40.000 0.00 0.00 0.00 2.52
2592 2862 9.346725 GCTCTACTTTTCTTTCCATTTTACATG 57.653 33.333 0.00 0.00 0.00 3.21
2666 2940 4.440802 GGCTAGTGAGTCAGATACCAACTG 60.441 50.000 0.00 0.00 36.80 3.16
2687 2968 2.279741 GAATCTGTACTGGCGCAATCA 58.720 47.619 10.83 0.00 0.00 2.57
2699 2980 3.181488 TGGCGCAATCAACATGATAAAGG 60.181 43.478 10.83 0.00 35.76 3.11
2703 2984 3.960102 GCAATCAACATGATAAAGGGGGA 59.040 43.478 0.00 0.00 35.76 4.81
2704 2985 4.590222 GCAATCAACATGATAAAGGGGGAT 59.410 41.667 0.00 0.00 35.76 3.85
2714 2995 8.704668 ACATGATAAAGGGGGATTAAACAATTC 58.295 33.333 0.00 0.00 0.00 2.17
2724 3005 7.290813 GGGGATTAAACAATTCAGATACTCCT 58.709 38.462 0.00 0.00 0.00 3.69
2726 3007 8.841300 GGGATTAAACAATTCAGATACTCCTTC 58.159 37.037 0.00 0.00 0.00 3.46
2728 3009 7.843490 TTAAACAATTCAGATACTCCTTCCG 57.157 36.000 0.00 0.00 0.00 4.30
2744 3025 7.062957 ACTCCTTCCGATCCAAATTAATTGAT 58.937 34.615 0.39 1.14 41.85 2.57
2745 3026 7.013655 ACTCCTTCCGATCCAAATTAATTGATG 59.986 37.037 0.39 0.00 41.85 3.07
2746 3027 6.833416 TCCTTCCGATCCAAATTAATTGATGT 59.167 34.615 0.39 0.00 41.85 3.06
2747 3028 7.341769 TCCTTCCGATCCAAATTAATTGATGTT 59.658 33.333 0.39 0.00 41.85 2.71
2748 3029 8.629158 CCTTCCGATCCAAATTAATTGATGTTA 58.371 33.333 0.39 0.00 41.85 2.41
2776 3057 2.461110 CGCCGATAAGTGCCACACC 61.461 63.158 0.00 0.00 34.49 4.16
2838 3119 0.320374 TAAGAGGAACAGCCCACACG 59.680 55.000 0.00 0.00 37.37 4.49
3018 3300 3.751246 CCCGCAGTTGCCATGGTG 61.751 66.667 14.67 4.51 37.91 4.17
3029 3311 2.605607 CCATGGTGCAGACCCCTCA 61.606 63.158 2.57 0.00 42.34 3.86
3112 3394 2.297033 ACAGTTGCCATGGTTGCTAAAG 59.703 45.455 14.67 0.00 0.00 1.85
3165 3447 3.124466 GCGGTTGCCATGATTTTAAAACC 59.876 43.478 1.97 0.00 33.98 3.27
3260 3545 4.100498 TGTTCGGGTAAAAGAGAGAGTTGT 59.900 41.667 0.00 0.00 0.00 3.32
3282 3567 2.385013 TGTGATCACAAGCACGCTAT 57.615 45.000 26.02 0.00 44.83 2.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.222805 GCACCTTACAAGAGGAAAAAGAAAAAG 59.777 37.037 0.00 0.00 39.25 2.27
6 7 4.580580 ACAGCACCTTACAAGAGGAAAAAG 59.419 41.667 0.00 0.00 39.25 2.27
7 8 4.532834 ACAGCACCTTACAAGAGGAAAAA 58.467 39.130 0.00 0.00 39.25 1.94
8 9 4.134563 GACAGCACCTTACAAGAGGAAAA 58.865 43.478 0.00 0.00 39.25 2.29
9 10 3.496160 GGACAGCACCTTACAAGAGGAAA 60.496 47.826 0.00 0.00 39.25 3.13
10 11 2.038557 GGACAGCACCTTACAAGAGGAA 59.961 50.000 0.00 0.00 39.25 3.36
11 12 1.623811 GGACAGCACCTTACAAGAGGA 59.376 52.381 0.00 0.00 39.25 3.71
12 13 1.673033 CGGACAGCACCTTACAAGAGG 60.673 57.143 0.00 0.00 42.75 3.69
13 14 1.272490 TCGGACAGCACCTTACAAGAG 59.728 52.381 0.00 0.00 0.00 2.85
14 15 1.334160 TCGGACAGCACCTTACAAGA 58.666 50.000 0.00 0.00 0.00 3.02
15 16 2.002586 CATCGGACAGCACCTTACAAG 58.997 52.381 0.00 0.00 0.00 3.16
16 17 1.346395 ACATCGGACAGCACCTTACAA 59.654 47.619 0.00 0.00 0.00 2.41
17 18 0.973632 ACATCGGACAGCACCTTACA 59.026 50.000 0.00 0.00 0.00 2.41
18 19 2.928116 GTTACATCGGACAGCACCTTAC 59.072 50.000 0.00 0.00 0.00 2.34
19 20 2.829720 AGTTACATCGGACAGCACCTTA 59.170 45.455 0.00 0.00 0.00 2.69
20 21 1.623811 AGTTACATCGGACAGCACCTT 59.376 47.619 0.00 0.00 0.00 3.50
21 22 1.204941 GAGTTACATCGGACAGCACCT 59.795 52.381 0.00 0.00 0.00 4.00
22 23 1.641577 GAGTTACATCGGACAGCACC 58.358 55.000 0.00 0.00 0.00 5.01
23 24 1.204941 AGGAGTTACATCGGACAGCAC 59.795 52.381 0.00 0.00 0.00 4.40
24 25 1.204704 CAGGAGTTACATCGGACAGCA 59.795 52.381 0.00 0.00 0.00 4.41
25 26 1.471676 CCAGGAGTTACATCGGACAGC 60.472 57.143 0.00 0.00 0.00 4.40
26 27 1.471676 GCCAGGAGTTACATCGGACAG 60.472 57.143 0.00 0.00 0.00 3.51
27 28 0.535335 GCCAGGAGTTACATCGGACA 59.465 55.000 0.00 0.00 0.00 4.02
28 29 0.179081 GGCCAGGAGTTACATCGGAC 60.179 60.000 0.00 0.00 0.00 4.79
29 30 1.672854 CGGCCAGGAGTTACATCGGA 61.673 60.000 2.24 0.00 0.00 4.55
30 31 1.227263 CGGCCAGGAGTTACATCGG 60.227 63.158 2.24 0.00 0.00 4.18
31 32 1.227263 CCGGCCAGGAGTTACATCG 60.227 63.158 2.24 0.00 45.00 3.84
32 33 0.252197 AACCGGCCAGGAGTTACATC 59.748 55.000 18.74 0.00 45.00 3.06
33 34 0.035439 CAACCGGCCAGGAGTTACAT 60.035 55.000 18.74 0.00 45.00 2.29
34 35 1.122632 TCAACCGGCCAGGAGTTACA 61.123 55.000 18.74 0.00 45.00 2.41
35 36 0.252197 ATCAACCGGCCAGGAGTTAC 59.748 55.000 18.74 0.00 45.00 2.50
36 37 0.251916 CATCAACCGGCCAGGAGTTA 59.748 55.000 18.74 3.67 45.00 2.24
37 38 1.002134 CATCAACCGGCCAGGAGTT 60.002 57.895 18.74 6.17 45.00 3.01
38 39 2.671070 CATCAACCGGCCAGGAGT 59.329 61.111 18.74 0.00 45.00 3.85
39 40 2.124570 CCATCAACCGGCCAGGAG 60.125 66.667 18.74 11.18 45.00 3.69
40 41 4.424711 GCCATCAACCGGCCAGGA 62.425 66.667 18.74 3.02 44.22 3.86
46 47 3.866883 ATTAACAAAGCCATCAACCGG 57.133 42.857 0.00 0.00 0.00 5.28
47 48 4.804108 TGAATTAACAAAGCCATCAACCG 58.196 39.130 0.00 0.00 0.00 4.44
48 49 7.120789 CTTTGAATTAACAAAGCCATCAACC 57.879 36.000 6.67 0.00 46.05 3.77
58 59 2.630580 AGCCCGGCTTTGAATTAACAAA 59.369 40.909 5.94 0.00 33.89 2.83
59 60 2.230266 GAGCCCGGCTTTGAATTAACAA 59.770 45.455 14.70 0.00 39.88 2.83
60 61 1.816224 GAGCCCGGCTTTGAATTAACA 59.184 47.619 14.70 0.00 39.88 2.41
61 62 2.092323 AGAGCCCGGCTTTGAATTAAC 58.908 47.619 14.70 0.00 39.88 2.01
62 63 2.026262 AGAGAGCCCGGCTTTGAATTAA 60.026 45.455 14.70 0.00 39.88 1.40
63 64 1.559682 AGAGAGCCCGGCTTTGAATTA 59.440 47.619 14.70 0.00 39.88 1.40
64 65 0.329596 AGAGAGCCCGGCTTTGAATT 59.670 50.000 14.70 0.00 39.88 2.17
65 66 0.107459 GAGAGAGCCCGGCTTTGAAT 60.107 55.000 14.70 0.00 39.88 2.57
66 67 1.194781 AGAGAGAGCCCGGCTTTGAA 61.195 55.000 14.70 0.00 39.88 2.69
67 68 1.608717 GAGAGAGAGCCCGGCTTTGA 61.609 60.000 14.70 0.00 39.88 2.69
68 69 1.153469 GAGAGAGAGCCCGGCTTTG 60.153 63.158 14.70 0.00 39.88 2.77
69 70 2.716017 CGAGAGAGAGCCCGGCTTT 61.716 63.158 14.70 8.02 39.88 3.51
70 71 3.144193 CGAGAGAGAGCCCGGCTT 61.144 66.667 14.70 3.45 39.88 4.35
71 72 4.116585 TCGAGAGAGAGCCCGGCT 62.117 66.667 13.16 13.16 36.94 5.52
103 104 7.256296 CCCAATGATTAAAGTCAGTCCCTTTTT 60.256 37.037 0.00 0.00 34.20 1.94
104 105 6.211384 CCCAATGATTAAAGTCAGTCCCTTTT 59.789 38.462 0.00 0.00 34.20 2.27
105 106 5.716703 CCCAATGATTAAAGTCAGTCCCTTT 59.283 40.000 0.00 0.00 36.23 3.11
106 107 5.015178 TCCCAATGATTAAAGTCAGTCCCTT 59.985 40.000 0.00 0.00 0.00 3.95
179 180 3.668656 GCGTTTATTCCAGCTTTGTTCAC 59.331 43.478 0.00 0.00 0.00 3.18
181 182 3.057526 AGGCGTTTATTCCAGCTTTGTTC 60.058 43.478 0.00 0.00 0.00 3.18
196 197 1.223187 CGTTGGTGAGTTAGGCGTTT 58.777 50.000 0.00 0.00 0.00 3.60
200 201 1.067071 AGCTACGTTGGTGAGTTAGGC 60.067 52.381 0.00 0.00 0.00 3.93
210 211 3.256136 CCCTCTAATCCTAGCTACGTTGG 59.744 52.174 0.00 0.00 0.00 3.77
215 216 5.453480 CCAAACACCCTCTAATCCTAGCTAC 60.453 48.000 0.00 0.00 0.00 3.58
225 226 4.895668 AACGTATCCAAACACCCTCTAA 57.104 40.909 0.00 0.00 0.00 2.10
226 227 4.895668 AAACGTATCCAAACACCCTCTA 57.104 40.909 0.00 0.00 0.00 2.43
227 228 3.782656 AAACGTATCCAAACACCCTCT 57.217 42.857 0.00 0.00 0.00 3.69
228 229 4.999311 ACTAAAACGTATCCAAACACCCTC 59.001 41.667 0.00 0.00 0.00 4.30
229 230 4.976864 ACTAAAACGTATCCAAACACCCT 58.023 39.130 0.00 0.00 0.00 4.34
230 231 4.154737 GGACTAAAACGTATCCAAACACCC 59.845 45.833 0.00 0.00 0.00 4.61
231 232 4.154737 GGGACTAAAACGTATCCAAACACC 59.845 45.833 0.00 0.00 32.45 4.16
232 233 4.756135 TGGGACTAAAACGTATCCAAACAC 59.244 41.667 0.00 0.00 32.45 3.32
233 234 4.970711 TGGGACTAAAACGTATCCAAACA 58.029 39.130 0.00 0.00 32.45 2.83
234 235 5.644636 TCATGGGACTAAAACGTATCCAAAC 59.355 40.000 0.00 0.00 32.45 2.93
235 236 5.644636 GTCATGGGACTAAAACGTATCCAAA 59.355 40.000 0.00 0.00 40.99 3.28
236 237 5.180271 GTCATGGGACTAAAACGTATCCAA 58.820 41.667 0.00 0.00 40.99 3.53
237 238 4.761975 GTCATGGGACTAAAACGTATCCA 58.238 43.478 0.00 0.00 40.99 3.41
252 253 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
253 254 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
254 255 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
255 256 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
256 257 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
257 258 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
258 259 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
259 260 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
260 261 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
261 262 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
262 263 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
263 264 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
264 265 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
265 266 4.630505 GCTAGCAAGTTTTAGTCCCACTAC 59.369 45.833 10.63 0.00 28.93 2.73
266 267 4.323257 GGCTAGCAAGTTTTAGTCCCACTA 60.323 45.833 18.24 0.00 0.00 2.74
267 268 3.559384 GGCTAGCAAGTTTTAGTCCCACT 60.559 47.826 18.24 0.00 0.00 4.00
268 269 2.747989 GGCTAGCAAGTTTTAGTCCCAC 59.252 50.000 18.24 0.00 0.00 4.61
269 270 2.642807 AGGCTAGCAAGTTTTAGTCCCA 59.357 45.455 18.24 0.00 0.00 4.37
270 271 3.271729 GAGGCTAGCAAGTTTTAGTCCC 58.728 50.000 18.24 0.00 0.00 4.46
271 272 3.939066 TGAGGCTAGCAAGTTTTAGTCC 58.061 45.455 18.24 0.00 0.00 3.85
272 273 4.572795 GGATGAGGCTAGCAAGTTTTAGTC 59.427 45.833 18.24 1.74 0.00 2.59
273 274 4.019321 TGGATGAGGCTAGCAAGTTTTAGT 60.019 41.667 18.24 0.00 0.00 2.24
274 275 4.517285 TGGATGAGGCTAGCAAGTTTTAG 58.483 43.478 18.24 0.00 0.00 1.85
275 276 4.568072 TGGATGAGGCTAGCAAGTTTTA 57.432 40.909 18.24 0.00 0.00 1.52
276 277 3.439857 TGGATGAGGCTAGCAAGTTTT 57.560 42.857 18.24 0.00 0.00 2.43
277 278 3.285484 CATGGATGAGGCTAGCAAGTTT 58.715 45.455 18.24 0.00 0.00 2.66
278 279 2.928334 CATGGATGAGGCTAGCAAGTT 58.072 47.619 18.24 0.00 0.00 2.66
279 280 1.476471 GCATGGATGAGGCTAGCAAGT 60.476 52.381 18.24 0.00 0.00 3.16
280 281 1.202782 AGCATGGATGAGGCTAGCAAG 60.203 52.381 18.24 0.00 40.84 4.01
281 282 0.841961 AGCATGGATGAGGCTAGCAA 59.158 50.000 18.24 1.28 40.84 3.91
282 283 0.108019 CAGCATGGATGAGGCTAGCA 59.892 55.000 18.24 0.00 40.61 3.49
283 284 2.929830 CAGCATGGATGAGGCTAGC 58.070 57.895 6.04 6.04 40.61 3.42
295 296 6.348786 CGATTTAGTATTTGGATCCCAGCATG 60.349 42.308 9.90 0.00 33.81 4.06
296 297 5.707298 CGATTTAGTATTTGGATCCCAGCAT 59.293 40.000 9.90 0.00 33.81 3.79
297 298 5.063204 CGATTTAGTATTTGGATCCCAGCA 58.937 41.667 9.90 0.00 33.81 4.41
298 299 5.179555 GTCGATTTAGTATTTGGATCCCAGC 59.820 44.000 9.90 0.00 33.81 4.85
299 300 6.525629 AGTCGATTTAGTATTTGGATCCCAG 58.474 40.000 9.90 0.00 33.81 4.45
300 301 6.494666 AGTCGATTTAGTATTTGGATCCCA 57.505 37.500 9.90 0.00 0.00 4.37
301 302 8.897872 TTTAGTCGATTTAGTATTTGGATCCC 57.102 34.615 9.90 0.00 0.00 3.85
315 316 9.774742 GCTCATTAACTTGATTTTAGTCGATTT 57.225 29.630 0.00 0.00 0.00 2.17
316 317 8.946085 TGCTCATTAACTTGATTTTAGTCGATT 58.054 29.630 0.00 0.00 0.00 3.34
317 318 8.492673 TGCTCATTAACTTGATTTTAGTCGAT 57.507 30.769 0.00 0.00 0.00 3.59
318 319 7.899178 TGCTCATTAACTTGATTTTAGTCGA 57.101 32.000 0.00 0.00 0.00 4.20
319 320 9.559958 AAATGCTCATTAACTTGATTTTAGTCG 57.440 29.630 0.00 0.00 0.00 4.18
330 331 9.866655 TGGAGGATAATAAATGCTCATTAACTT 57.133 29.630 8.48 0.00 38.10 2.66
331 332 9.866655 TTGGAGGATAATAAATGCTCATTAACT 57.133 29.630 8.48 0.00 38.10 2.24
334 335 9.866655 AGTTTGGAGGATAATAAATGCTCATTA 57.133 29.630 8.48 0.00 38.10 1.90
335 336 8.773033 AGTTTGGAGGATAATAAATGCTCATT 57.227 30.769 8.48 0.00 38.10 2.57
336 337 8.223330 AGAGTTTGGAGGATAATAAATGCTCAT 58.777 33.333 8.48 0.00 38.10 2.90
337 338 7.577303 AGAGTTTGGAGGATAATAAATGCTCA 58.423 34.615 8.48 0.00 38.10 4.26
338 339 8.457238 AAGAGTTTGGAGGATAATAAATGCTC 57.543 34.615 0.00 0.00 36.02 4.26
339 340 8.055181 TGAAGAGTTTGGAGGATAATAAATGCT 58.945 33.333 0.00 0.00 0.00 3.79
340 341 8.225603 TGAAGAGTTTGGAGGATAATAAATGC 57.774 34.615 0.00 0.00 0.00 3.56
343 344 9.408648 GGATTGAAGAGTTTGGAGGATAATAAA 57.591 33.333 0.00 0.00 0.00 1.40
344 345 8.556589 TGGATTGAAGAGTTTGGAGGATAATAA 58.443 33.333 0.00 0.00 0.00 1.40
345 346 8.101309 TGGATTGAAGAGTTTGGAGGATAATA 57.899 34.615 0.00 0.00 0.00 0.98
346 347 6.973642 TGGATTGAAGAGTTTGGAGGATAAT 58.026 36.000 0.00 0.00 0.00 1.28
347 348 6.215431 TCTGGATTGAAGAGTTTGGAGGATAA 59.785 38.462 0.00 0.00 0.00 1.75
348 349 5.726308 TCTGGATTGAAGAGTTTGGAGGATA 59.274 40.000 0.00 0.00 0.00 2.59
349 350 4.537688 TCTGGATTGAAGAGTTTGGAGGAT 59.462 41.667 0.00 0.00 0.00 3.24
350 351 3.909995 TCTGGATTGAAGAGTTTGGAGGA 59.090 43.478 0.00 0.00 0.00 3.71
351 352 4.292186 TCTGGATTGAAGAGTTTGGAGG 57.708 45.455 0.00 0.00 0.00 4.30
352 353 5.312079 AGTTCTGGATTGAAGAGTTTGGAG 58.688 41.667 0.00 0.00 0.00 3.86
353 354 5.308825 GAGTTCTGGATTGAAGAGTTTGGA 58.691 41.667 0.00 0.00 0.00 3.53
354 355 4.153117 CGAGTTCTGGATTGAAGAGTTTGG 59.847 45.833 0.00 0.00 0.00 3.28
355 356 4.377841 GCGAGTTCTGGATTGAAGAGTTTG 60.378 45.833 0.00 0.00 0.00 2.93
356 357 3.748568 GCGAGTTCTGGATTGAAGAGTTT 59.251 43.478 0.00 0.00 0.00 2.66
357 358 3.330267 GCGAGTTCTGGATTGAAGAGTT 58.670 45.455 0.00 0.00 0.00 3.01
358 359 2.354203 GGCGAGTTCTGGATTGAAGAGT 60.354 50.000 0.00 0.00 0.00 3.24
359 360 2.093764 AGGCGAGTTCTGGATTGAAGAG 60.094 50.000 0.00 0.00 0.00 2.85
360 361 1.902508 AGGCGAGTTCTGGATTGAAGA 59.097 47.619 0.00 0.00 0.00 2.87
361 362 2.005451 CAGGCGAGTTCTGGATTGAAG 58.995 52.381 0.00 0.00 0.00 3.02
362 363 1.347707 ACAGGCGAGTTCTGGATTGAA 59.652 47.619 0.00 0.00 36.62 2.69
363 364 0.976641 ACAGGCGAGTTCTGGATTGA 59.023 50.000 0.00 0.00 36.62 2.57
364 365 1.081892 CACAGGCGAGTTCTGGATTG 58.918 55.000 0.00 0.00 36.62 2.67
365 366 0.687354 ACACAGGCGAGTTCTGGATT 59.313 50.000 0.00 0.00 36.62 3.01
366 367 0.687354 AACACAGGCGAGTTCTGGAT 59.313 50.000 0.00 0.00 36.62 3.41
367 368 1.334160 TAACACAGGCGAGTTCTGGA 58.666 50.000 0.00 0.00 36.62 3.86
368 369 2.163818 TTAACACAGGCGAGTTCTGG 57.836 50.000 0.00 0.00 36.62 3.86
369 370 2.096218 GCTTTAACACAGGCGAGTTCTG 60.096 50.000 0.00 0.00 38.16 3.02
370 371 2.143925 GCTTTAACACAGGCGAGTTCT 58.856 47.619 0.00 0.00 0.00 3.01
371 372 1.871039 TGCTTTAACACAGGCGAGTTC 59.129 47.619 0.00 0.00 0.00 3.01
372 373 1.873591 CTGCTTTAACACAGGCGAGTT 59.126 47.619 0.00 0.00 0.00 3.01
373 374 1.070134 TCTGCTTTAACACAGGCGAGT 59.930 47.619 4.52 0.00 34.57 4.18
374 375 1.795768 TCTGCTTTAACACAGGCGAG 58.204 50.000 4.52 0.00 34.57 5.03
375 376 2.076100 CATCTGCTTTAACACAGGCGA 58.924 47.619 4.52 0.00 34.57 5.54
376 377 2.076100 TCATCTGCTTTAACACAGGCG 58.924 47.619 4.52 0.00 34.57 5.52
377 378 3.077359 ACTCATCTGCTTTAACACAGGC 58.923 45.455 4.52 0.00 34.57 4.85
378 379 6.801539 TTAACTCATCTGCTTTAACACAGG 57.198 37.500 4.52 0.00 34.57 4.00
379 380 8.506437 TCATTTAACTCATCTGCTTTAACACAG 58.494 33.333 0.00 0.00 35.15 3.66
380 381 8.389779 TCATTTAACTCATCTGCTTTAACACA 57.610 30.769 0.00 0.00 0.00 3.72
381 382 8.721478 TCTCATTTAACTCATCTGCTTTAACAC 58.279 33.333 0.00 0.00 0.00 3.32
382 383 8.846943 TCTCATTTAACTCATCTGCTTTAACA 57.153 30.769 0.00 0.00 0.00 2.41
383 384 9.766277 CTTCTCATTTAACTCATCTGCTTTAAC 57.234 33.333 0.00 0.00 0.00 2.01
384 385 9.725019 TCTTCTCATTTAACTCATCTGCTTTAA 57.275 29.630 0.00 0.00 0.00 1.52
385 386 9.376075 CTCTTCTCATTTAACTCATCTGCTTTA 57.624 33.333 0.00 0.00 0.00 1.85
386 387 8.099537 TCTCTTCTCATTTAACTCATCTGCTTT 58.900 33.333 0.00 0.00 0.00 3.51
387 388 7.619050 TCTCTTCTCATTTAACTCATCTGCTT 58.381 34.615 0.00 0.00 0.00 3.91
388 389 7.123997 TCTCTCTTCTCATTTAACTCATCTGCT 59.876 37.037 0.00 0.00 0.00 4.24
389 390 7.264221 TCTCTCTTCTCATTTAACTCATCTGC 58.736 38.462 0.00 0.00 0.00 4.26
390 391 7.922278 CCTCTCTCTTCTCATTTAACTCATCTG 59.078 40.741 0.00 0.00 0.00 2.90
391 392 7.838696 TCCTCTCTCTTCTCATTTAACTCATCT 59.161 37.037 0.00 0.00 0.00 2.90
392 393 7.920682 GTCCTCTCTCTTCTCATTTAACTCATC 59.079 40.741 0.00 0.00 0.00 2.92
393 394 7.619302 AGTCCTCTCTCTTCTCATTTAACTCAT 59.381 37.037 0.00 0.00 0.00 2.90
394 395 6.951198 AGTCCTCTCTCTTCTCATTTAACTCA 59.049 38.462 0.00 0.00 0.00 3.41
395 396 7.404671 AGTCCTCTCTCTTCTCATTTAACTC 57.595 40.000 0.00 0.00 0.00 3.01
396 397 8.887264 TTAGTCCTCTCTCTTCTCATTTAACT 57.113 34.615 0.00 0.00 0.00 2.24
401 402 9.261035 TGTAAATTAGTCCTCTCTCTTCTCATT 57.739 33.333 0.00 0.00 0.00 2.57
402 403 8.830915 TGTAAATTAGTCCTCTCTCTTCTCAT 57.169 34.615 0.00 0.00 0.00 2.90
403 404 8.830915 ATGTAAATTAGTCCTCTCTCTTCTCA 57.169 34.615 0.00 0.00 0.00 3.27
413 414 9.557061 CCCCTACTAAAATGTAAATTAGTCCTC 57.443 37.037 1.78 0.00 40.53 3.71
414 415 9.065722 ACCCCTACTAAAATGTAAATTAGTCCT 57.934 33.333 1.78 0.00 40.53 3.85
418 419 9.264719 CGGTACCCCTACTAAAATGTAAATTAG 57.735 37.037 6.25 0.00 35.67 1.73
419 420 7.714813 GCGGTACCCCTACTAAAATGTAAATTA 59.285 37.037 6.25 0.00 0.00 1.40
420 421 6.543465 GCGGTACCCCTACTAAAATGTAAATT 59.457 38.462 6.25 0.00 0.00 1.82
421 422 6.057533 GCGGTACCCCTACTAAAATGTAAAT 58.942 40.000 6.25 0.00 0.00 1.40
422 423 5.189539 AGCGGTACCCCTACTAAAATGTAAA 59.810 40.000 6.25 0.00 0.00 2.01
423 424 4.716287 AGCGGTACCCCTACTAAAATGTAA 59.284 41.667 6.25 0.00 0.00 2.41
424 425 4.099881 CAGCGGTACCCCTACTAAAATGTA 59.900 45.833 6.25 0.00 0.00 2.29
425 426 3.109928 AGCGGTACCCCTACTAAAATGT 58.890 45.455 6.25 0.00 0.00 2.71
426 427 3.133362 TCAGCGGTACCCCTACTAAAATG 59.867 47.826 6.25 0.00 0.00 2.32
427 428 3.133542 GTCAGCGGTACCCCTACTAAAAT 59.866 47.826 6.25 0.00 0.00 1.82
428 429 2.497273 GTCAGCGGTACCCCTACTAAAA 59.503 50.000 6.25 0.00 0.00 1.52
429 430 2.102578 GTCAGCGGTACCCCTACTAAA 58.897 52.381 6.25 0.00 0.00 1.85
430 431 1.285962 AGTCAGCGGTACCCCTACTAA 59.714 52.381 6.25 0.00 0.00 2.24
431 432 0.921896 AGTCAGCGGTACCCCTACTA 59.078 55.000 6.25 0.00 0.00 1.82
432 433 0.921896 TAGTCAGCGGTACCCCTACT 59.078 55.000 6.25 9.53 0.00 2.57
433 434 1.767759 TTAGTCAGCGGTACCCCTAC 58.232 55.000 6.25 2.59 0.00 3.18
434 435 2.530460 TTTAGTCAGCGGTACCCCTA 57.470 50.000 6.25 0.00 0.00 3.53
435 436 1.648116 TTTTAGTCAGCGGTACCCCT 58.352 50.000 6.25 0.00 0.00 4.79
436 437 2.477845 TTTTTAGTCAGCGGTACCCC 57.522 50.000 6.25 0.00 0.00 4.95
462 463 4.223255 AGGGGCTAAAACTAGTCTTGAGAC 59.777 45.833 0.00 2.93 45.08 3.36
463 464 4.426704 AGGGGCTAAAACTAGTCTTGAGA 58.573 43.478 0.00 0.00 0.00 3.27
464 465 4.468153 AGAGGGGCTAAAACTAGTCTTGAG 59.532 45.833 0.00 0.00 0.00 3.02
465 466 4.426704 AGAGGGGCTAAAACTAGTCTTGA 58.573 43.478 0.00 0.00 0.00 3.02
466 467 4.828072 AGAGGGGCTAAAACTAGTCTTG 57.172 45.455 0.00 0.00 0.00 3.02
467 468 5.844773 AAAGAGGGGCTAAAACTAGTCTT 57.155 39.130 0.00 0.00 0.00 3.01
468 469 6.024247 ACTAAAGAGGGGCTAAAACTAGTCT 58.976 40.000 0.00 0.00 0.00 3.24
469 470 6.070938 TGACTAAAGAGGGGCTAAAACTAGTC 60.071 42.308 0.00 0.00 0.00 2.59
470 471 5.783875 TGACTAAAGAGGGGCTAAAACTAGT 59.216 40.000 0.00 0.00 0.00 2.57
471 472 6.295719 TGACTAAAGAGGGGCTAAAACTAG 57.704 41.667 0.00 0.00 0.00 2.57
472 473 5.189145 CCTGACTAAAGAGGGGCTAAAACTA 59.811 44.000 0.00 0.00 0.00 2.24
473 474 4.019231 CCTGACTAAAGAGGGGCTAAAACT 60.019 45.833 0.00 0.00 0.00 2.66
474 475 4.262617 CCTGACTAAAGAGGGGCTAAAAC 58.737 47.826 0.00 0.00 0.00 2.43
475 476 3.265995 CCCTGACTAAAGAGGGGCTAAAA 59.734 47.826 0.00 0.00 44.88 1.52
476 477 2.844348 CCCTGACTAAAGAGGGGCTAAA 59.156 50.000 0.00 0.00 44.88 1.85
477 478 2.478292 CCCTGACTAAAGAGGGGCTAA 58.522 52.381 0.00 0.00 44.88 3.09
478 479 2.176247 CCCTGACTAAAGAGGGGCTA 57.824 55.000 0.00 0.00 44.88 3.93
479 480 3.013682 CCCTGACTAAAGAGGGGCT 57.986 57.895 0.00 0.00 44.88 5.19
483 484 1.280457 AGCACCCCTGACTAAAGAGG 58.720 55.000 0.00 0.00 0.00 3.69
484 485 2.303022 TCAAGCACCCCTGACTAAAGAG 59.697 50.000 0.00 0.00 0.00 2.85
485 486 2.334977 TCAAGCACCCCTGACTAAAGA 58.665 47.619 0.00 0.00 0.00 2.52
486 487 2.859165 TCAAGCACCCCTGACTAAAG 57.141 50.000 0.00 0.00 0.00 1.85
487 488 3.117663 AGTTTCAAGCACCCCTGACTAAA 60.118 43.478 0.00 0.00 0.00 1.85
488 489 2.441750 AGTTTCAAGCACCCCTGACTAA 59.558 45.455 0.00 0.00 0.00 2.24
489 490 2.054799 AGTTTCAAGCACCCCTGACTA 58.945 47.619 0.00 0.00 0.00 2.59
490 491 0.846693 AGTTTCAAGCACCCCTGACT 59.153 50.000 0.00 0.00 0.00 3.41
491 492 1.692411 AAGTTTCAAGCACCCCTGAC 58.308 50.000 0.00 0.00 0.00 3.51
492 493 2.452600 AAAGTTTCAAGCACCCCTGA 57.547 45.000 0.00 0.00 0.00 3.86
493 494 2.029918 GCTAAAGTTTCAAGCACCCCTG 60.030 50.000 5.64 0.00 36.26 4.45
494 495 2.239400 GCTAAAGTTTCAAGCACCCCT 58.761 47.619 5.64 0.00 36.26 4.79
495 496 1.272490 GGCTAAAGTTTCAAGCACCCC 59.728 52.381 11.51 0.00 38.01 4.95
496 497 2.229062 GAGGCTAAAGTTTCAAGCACCC 59.771 50.000 11.51 0.00 38.01 4.61
497 498 3.149981 AGAGGCTAAAGTTTCAAGCACC 58.850 45.455 11.51 3.82 38.01 5.01
498 499 4.837896 AAGAGGCTAAAGTTTCAAGCAC 57.162 40.909 11.51 5.94 38.01 4.40
499 500 6.770785 TCTTTAAGAGGCTAAAGTTTCAAGCA 59.229 34.615 11.51 0.00 39.12 3.91
500 501 7.173390 TCTCTTTAAGAGGCTAAAGTTTCAAGC 59.827 37.037 20.29 2.28 42.54 4.01
501 502 8.499967 GTCTCTTTAAGAGGCTAAAGTTTCAAG 58.500 37.037 18.21 0.00 43.38 3.02
502 503 8.379457 GTCTCTTTAAGAGGCTAAAGTTTCAA 57.621 34.615 18.21 0.00 43.38 2.69
503 504 7.964604 GTCTCTTTAAGAGGCTAAAGTTTCA 57.035 36.000 18.21 0.00 43.38 2.69
513 514 9.654663 TGACTAAAAATAGTCTCTTTAAGAGGC 57.345 33.333 17.87 17.87 46.94 4.70
556 557 5.779771 AGATTAAAAAGGTGCTTGGATCCAA 59.220 36.000 25.53 25.53 0.00 3.53
557 558 5.332743 AGATTAAAAAGGTGCTTGGATCCA 58.667 37.500 11.44 11.44 0.00 3.41
558 559 5.163509 GGAGATTAAAAAGGTGCTTGGATCC 60.164 44.000 4.20 4.20 0.00 3.36
559 560 5.654209 AGGAGATTAAAAAGGTGCTTGGATC 59.346 40.000 0.00 0.00 0.00 3.36
560 561 5.420104 CAGGAGATTAAAAAGGTGCTTGGAT 59.580 40.000 0.00 0.00 0.00 3.41
561 562 4.766891 CAGGAGATTAAAAAGGTGCTTGGA 59.233 41.667 0.00 0.00 0.00 3.53
562 563 4.619160 GCAGGAGATTAAAAAGGTGCTTGG 60.619 45.833 0.00 0.00 0.00 3.61
563 564 4.488879 GCAGGAGATTAAAAAGGTGCTTG 58.511 43.478 0.00 0.00 0.00 4.01
564 565 3.511540 GGCAGGAGATTAAAAAGGTGCTT 59.488 43.478 0.00 0.00 0.00 3.91
565 566 3.092301 GGCAGGAGATTAAAAAGGTGCT 58.908 45.455 0.00 0.00 0.00 4.40
566 567 2.825532 TGGCAGGAGATTAAAAAGGTGC 59.174 45.455 0.00 0.00 0.00 5.01
567 568 4.280677 TGTTGGCAGGAGATTAAAAAGGTG 59.719 41.667 0.00 0.00 0.00 4.00
568 569 4.479158 TGTTGGCAGGAGATTAAAAAGGT 58.521 39.130 0.00 0.00 0.00 3.50
569 570 5.665916 ATGTTGGCAGGAGATTAAAAAGG 57.334 39.130 0.00 0.00 0.00 3.11
570 571 7.396540 ACTATGTTGGCAGGAGATTAAAAAG 57.603 36.000 0.00 0.00 0.00 2.27
571 572 7.450014 TGAACTATGTTGGCAGGAGATTAAAAA 59.550 33.333 0.00 0.00 0.00 1.94
572 573 6.945435 TGAACTATGTTGGCAGGAGATTAAAA 59.055 34.615 0.00 0.00 0.00 1.52
573 574 6.480763 TGAACTATGTTGGCAGGAGATTAAA 58.519 36.000 0.00 0.00 0.00 1.52
800 803 7.467623 ACAAAGAATTCGTCTGAATGATTAGC 58.532 34.615 10.30 0.00 44.02 3.09
838 841 1.393883 GCCTTGTTAGCTAGCGTGTTC 59.606 52.381 9.55 0.54 0.00 3.18
844 847 0.665298 GCATGGCCTTGTTAGCTAGC 59.335 55.000 19.05 6.62 0.00 3.42
966 992 3.003171 TCACGTACTACTGTTTGCGTGTA 59.997 43.478 22.30 12.62 41.46 2.90
994 1020 3.157217 ATGCCGTCGCCATCTCCTC 62.157 63.158 0.00 0.00 0.00 3.71
1237 1274 2.763273 TAGCGTGGCATGCATGTGC 61.763 57.895 31.39 23.02 44.31 4.57
1297 1335 6.093909 CACCTTGCAGTATGTGACATATGAAA 59.906 38.462 10.38 8.04 39.31 2.69
1298 1336 5.585844 CACCTTGCAGTATGTGACATATGAA 59.414 40.000 10.38 0.72 39.31 2.57
1299 1337 5.118286 CACCTTGCAGTATGTGACATATGA 58.882 41.667 10.38 0.00 39.31 2.15
1300 1338 4.274214 CCACCTTGCAGTATGTGACATATG 59.726 45.833 8.72 9.07 39.31 1.78
1301 1339 4.454678 CCACCTTGCAGTATGTGACATAT 58.545 43.478 8.72 0.00 39.31 1.78
1302 1340 3.872696 CCACCTTGCAGTATGTGACATA 58.127 45.455 0.23 0.23 39.31 2.29
1303 1341 2.715046 CCACCTTGCAGTATGTGACAT 58.285 47.619 2.65 2.65 39.31 3.06
1304 1342 1.881925 GCCACCTTGCAGTATGTGACA 60.882 52.381 8.11 0.00 39.31 3.58
1305 1343 0.804989 GCCACCTTGCAGTATGTGAC 59.195 55.000 8.11 0.00 39.31 3.67
1306 1344 0.399833 TGCCACCTTGCAGTATGTGA 59.600 50.000 8.11 0.00 39.31 3.58
1307 1345 1.466856 ATGCCACCTTGCAGTATGTG 58.533 50.000 0.00 0.00 45.93 3.21
1308 1346 2.220653 AATGCCACCTTGCAGTATGT 57.779 45.000 0.00 0.00 45.93 2.29
1309 1347 2.492881 TGAAATGCCACCTTGCAGTATG 59.507 45.455 0.00 0.00 45.93 2.39
1310 1348 2.806434 TGAAATGCCACCTTGCAGTAT 58.194 42.857 0.00 0.00 45.93 2.12
1311 1349 2.284754 TGAAATGCCACCTTGCAGTA 57.715 45.000 0.00 0.00 45.93 2.74
1312 1350 1.636148 ATGAAATGCCACCTTGCAGT 58.364 45.000 0.00 0.00 45.93 4.40
1313 1351 3.131577 ACATATGAAATGCCACCTTGCAG 59.868 43.478 10.38 0.00 45.93 4.41
1314 1352 3.098377 ACATATGAAATGCCACCTTGCA 58.902 40.909 10.38 0.00 46.94 4.08
1315 1353 3.130869 TCACATATGAAATGCCACCTTGC 59.869 43.478 10.38 0.00 0.00 4.01
1316 1354 4.158209 TGTCACATATGAAATGCCACCTTG 59.842 41.667 10.38 0.00 36.31 3.61
1317 1355 4.343231 TGTCACATATGAAATGCCACCTT 58.657 39.130 10.38 0.00 36.31 3.50
1318 1356 3.966979 TGTCACATATGAAATGCCACCT 58.033 40.909 10.38 0.00 36.31 4.00
1319 1357 4.924305 ATGTCACATATGAAATGCCACC 57.076 40.909 10.38 0.00 36.31 4.61
1320 1358 7.599630 AAAAATGTCACATATGAAATGCCAC 57.400 32.000 10.38 0.00 32.67 5.01
1321 1359 9.887629 AATAAAAATGTCACATATGAAATGCCA 57.112 25.926 10.38 0.00 32.67 4.92
1355 1393 8.047310 GGATACAAGGGGGTAGTATATGAAATG 58.953 40.741 0.00 0.00 0.00 2.32
1357 1395 6.502863 GGGATACAAGGGGGTAGTATATGAAA 59.497 42.308 0.00 0.00 39.74 2.69
1358 1396 6.027482 GGGATACAAGGGGGTAGTATATGAA 58.973 44.000 0.00 0.00 39.74 2.57
1359 1397 5.320527 AGGGATACAAGGGGGTAGTATATGA 59.679 44.000 0.00 0.00 39.74 2.15
1369 1413 2.205342 TCAAGAAGGGATACAAGGGGG 58.795 52.381 0.00 0.00 39.74 5.40
1370 1414 4.526438 ATTCAAGAAGGGATACAAGGGG 57.474 45.455 0.00 0.00 39.74 4.79
1374 1418 6.153851 TCTCGTGTATTCAAGAAGGGATACAA 59.846 38.462 0.00 0.00 32.64 2.41
1395 1439 3.867493 TGCATGCTTTCTTGATAGTCTCG 59.133 43.478 20.33 0.00 0.00 4.04
1463 1697 8.141298 TGATAGTACTATTTCCACCTTGACAA 57.859 34.615 16.46 0.00 0.00 3.18
1599 1851 2.103771 GTCTAGCAGAATGGAGGCATCA 59.896 50.000 0.00 0.00 35.86 3.07
1755 2007 3.685214 GACGATGGAGTCACGCGCT 62.685 63.158 5.73 0.00 40.65 5.92
1782 2034 3.030291 TGGCATGTGAAAGTTGAAACCT 58.970 40.909 0.00 0.00 0.00 3.50
1827 2079 1.065928 GACCTCGTCGGCGATTGAT 59.934 57.895 14.65 0.00 46.80 2.57
1866 2118 3.505293 GGAGTTCTTGAAGCTGAAATGCT 59.495 43.478 0.00 0.00 46.40 3.79
2109 2362 0.884704 GGTTGCTCAGCTTGTTCGGA 60.885 55.000 0.00 0.00 0.00 4.55
2160 2413 2.494471 TGTCTGGTCCGACGTGAATAAT 59.506 45.455 0.00 0.00 36.71 1.28
2277 2530 1.141657 GCTCCCATCTTCACCATAGCA 59.858 52.381 0.00 0.00 0.00 3.49
2297 2550 1.876714 CCGGTAAGCACGTCGATGG 60.877 63.158 9.90 0.00 0.00 3.51
2304 2557 3.751246 TCGGTCCCGGTAAGCACG 61.751 66.667 5.80 0.00 40.25 5.34
2325 2578 0.832135 AGACCTTCCTGACTTCGCCA 60.832 55.000 0.00 0.00 0.00 5.69
2361 2614 1.035385 TTCCACCGATCTAGCTCGCA 61.035 55.000 10.45 0.00 37.33 5.10
2431 2700 9.772973 GAAACCAAAATAACAAGGATTAAACCT 57.227 29.630 0.00 0.00 42.69 3.50
2475 2744 7.987458 AGCTAATTTGAGGTTCGATAATGAAGA 59.013 33.333 0.00 0.00 0.00 2.87
2507 2776 8.442384 CAGAATGTTGTTAACAAAAGCAACTTT 58.558 29.630 22.14 13.18 45.86 2.66
2552 2821 3.626930 AGTAGAGCGATCTTCAGGAAGT 58.373 45.455 9.21 0.00 39.38 3.01
2580 2850 9.460906 GGTAAAACGTAAAACATGTAAAATGGA 57.539 29.630 0.00 0.00 0.00 3.41
2592 2862 6.201234 TGTTAGTACGGGGTAAAACGTAAAAC 59.799 38.462 0.99 0.99 45.70 2.43
2593 2863 6.281405 TGTTAGTACGGGGTAAAACGTAAAA 58.719 36.000 0.00 0.00 45.70 1.52
2594 2864 5.844004 TGTTAGTACGGGGTAAAACGTAAA 58.156 37.500 0.00 0.00 45.70 2.01
2595 2865 5.455056 TGTTAGTACGGGGTAAAACGTAA 57.545 39.130 0.00 0.00 45.70 3.18
2596 2866 4.082463 CCTGTTAGTACGGGGTAAAACGTA 60.082 45.833 0.00 0.00 45.59 3.57
2597 2867 3.306019 CCTGTTAGTACGGGGTAAAACGT 60.306 47.826 0.00 0.00 45.59 3.99
2598 2868 3.253230 CCTGTTAGTACGGGGTAAAACG 58.747 50.000 0.00 0.00 45.59 3.60
2666 2940 1.599542 GATTGCGCCAGTACAGATTCC 59.400 52.381 4.18 0.00 0.00 3.01
2687 2968 8.622572 ATTGTTTAATCCCCCTTTATCATGTT 57.377 30.769 0.00 0.00 0.00 2.71
2699 2980 7.290813 AGGAGTATCTGAATTGTTTAATCCCC 58.709 38.462 0.00 0.00 33.73 4.81
2703 2984 8.265055 TCGGAAGGAGTATCTGAATTGTTTAAT 58.735 33.333 0.00 0.00 33.73 1.40
2704 2985 7.617225 TCGGAAGGAGTATCTGAATTGTTTAA 58.383 34.615 0.00 0.00 33.73 1.52
2714 2995 4.672587 TTTGGATCGGAAGGAGTATCTG 57.327 45.455 0.00 0.00 33.73 2.90
2744 3025 6.036300 CACTTATCGGCGTCCTTAAATTAACA 59.964 38.462 6.85 0.00 0.00 2.41
2745 3026 6.416514 CACTTATCGGCGTCCTTAAATTAAC 58.583 40.000 6.85 0.00 0.00 2.01
2746 3027 5.006941 GCACTTATCGGCGTCCTTAAATTAA 59.993 40.000 6.85 0.00 0.00 1.40
2747 3028 4.508861 GCACTTATCGGCGTCCTTAAATTA 59.491 41.667 6.85 0.00 0.00 1.40
2748 3029 3.311596 GCACTTATCGGCGTCCTTAAATT 59.688 43.478 6.85 0.00 0.00 1.82
2749 3030 2.870411 GCACTTATCGGCGTCCTTAAAT 59.130 45.455 6.85 0.00 0.00 1.40
2750 3031 2.273557 GCACTTATCGGCGTCCTTAAA 58.726 47.619 6.85 0.00 0.00 1.52
2751 3032 1.472026 GGCACTTATCGGCGTCCTTAA 60.472 52.381 6.85 0.80 0.00 1.85
2776 3057 1.137086 CAGATCCCCTAACGTCCACAG 59.863 57.143 0.00 0.00 0.00 3.66
2944 3226 0.106819 AGGTACGAGGCCTGACGTAT 60.107 55.000 24.50 11.03 44.50 3.06
3018 3300 0.257039 AACATGGATGAGGGGTCTGC 59.743 55.000 0.00 0.00 0.00 4.26
3029 3311 5.643379 ACTGCAATTAAACGAACATGGAT 57.357 34.783 0.00 0.00 0.00 3.41
3112 3394 0.101759 CCATACATGGCAACTGCAGC 59.898 55.000 15.27 0.00 41.75 5.25
3260 3545 0.798159 GCGTGCTTGTGATCACATGA 59.202 50.000 34.01 19.68 41.52 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.