Multiple sequence alignment - TraesCS5B01G430600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G430600 chr5B 100.000 2637 0 0 1 2637 605609810 605607174 0.000000e+00 4870
1 TraesCS5B01G430600 chr5B 90.155 904 51 12 664 1550 605532040 605531158 0.000000e+00 1142
2 TraesCS5B01G430600 chr5B 88.561 813 56 11 1314 2117 605626975 605626191 0.000000e+00 952
3 TraesCS5B01G430600 chr5B 90.709 635 50 6 1 631 605533760 605533131 0.000000e+00 837
4 TraesCS5B01G430600 chr5B 88.318 428 32 12 769 1182 605627500 605627077 5.070000e-137 497
5 TraesCS5B01G430600 chr5B 84.585 506 39 16 689 1182 606828949 606829427 1.430000e-127 466
6 TraesCS5B01G430600 chr5B 92.073 328 26 0 1311 1638 606829521 606829848 1.850000e-126 462
7 TraesCS5B01G430600 chr5B 91.509 212 14 1 971 1182 606751912 606752119 3.320000e-74 289
8 TraesCS5B01G430600 chr5B 95.858 169 4 3 1546 1712 605531133 605530966 1.200000e-68 270
9 TraesCS5B01G430600 chr5B 90.909 154 14 0 2226 2379 363955984 363955831 9.570000e-50 207
10 TraesCS5B01G430600 chr5B 90.446 157 14 1 2224 2379 180780116 180779960 3.440000e-49 206
11 TraesCS5B01G430600 chr5B 85.106 141 20 1 2075 2215 655116833 655116694 2.740000e-30 143
12 TraesCS5B01G430600 chr5D 92.829 1269 63 11 481 1738 490977841 490976590 0.000000e+00 1814
13 TraesCS5B01G430600 chr5D 86.847 1034 67 28 627 1638 491727239 491728225 0.000000e+00 1092
14 TraesCS5B01G430600 chr5D 92.008 488 34 4 1 487 490978377 490977894 0.000000e+00 680
15 TraesCS5B01G430600 chr5D 88.931 524 32 11 1314 1837 490981883 490981386 8.020000e-175 623
16 TraesCS5B01G430600 chr5D 84.526 601 52 20 628 1204 490982543 490981960 8.250000e-155 556
17 TraesCS5B01G430600 chr5D 78.331 623 77 37 591 1205 491682213 491682785 1.500000e-92 350
18 TraesCS5B01G430600 chr5D 87.903 124 14 1 2083 2206 363884974 363885096 7.610000e-31 145
19 TraesCS5B01G430600 chr5A 87.614 1421 96 31 449 1832 613466203 613464826 0.000000e+00 1576
20 TraesCS5B01G430600 chr5A 83.988 1043 95 41 627 1638 614354985 614355986 0.000000e+00 935
21 TraesCS5B01G430600 chr5A 87.184 554 38 11 1314 1861 613471127 613470601 1.350000e-167 599
22 TraesCS5B01G430600 chr5A 85.420 583 47 23 628 1181 613471794 613471221 2.940000e-159 571
23 TraesCS5B01G430600 chr5A 87.118 458 51 5 1 451 613466974 613466518 1.810000e-141 512
24 TraesCS5B01G430600 chr5A 88.462 260 24 5 2378 2637 437796331 437796584 2.550000e-80 309
25 TraesCS5B01G430600 chr3B 97.308 260 7 0 2377 2636 639683047 639683306 2.410000e-120 442
26 TraesCS5B01G430600 chr3B 92.903 155 9 2 2226 2379 357466242 357466395 9.500000e-55 224
27 TraesCS5B01G430600 chr3B 91.613 155 12 1 2226 2379 240405742 240405896 2.060000e-51 213
28 TraesCS5B01G430600 chr3B 92.593 108 8 0 2383 2490 780363753 780363646 3.510000e-34 156
29 TraesCS5B01G430600 chr7B 96.923 260 8 0 2378 2637 122009078 122009337 1.120000e-118 436
30 TraesCS5B01G430600 chr1B 96.923 260 6 1 2380 2637 295087266 295087525 4.030000e-118 435
31 TraesCS5B01G430600 chr1B 78.710 620 62 32 589 1181 550035183 550035759 1.500000e-92 350
32 TraesCS5B01G430600 chr1B 85.373 335 44 4 1314 1645 550035851 550036183 2.510000e-90 342
33 TraesCS5B01G430600 chr7A 95.753 259 11 0 2379 2637 631368905 631368647 4.060000e-113 418
34 TraesCS5B01G430600 chr7A 84.354 147 21 2 2080 2225 547176791 547176936 2.740000e-30 143
35 TraesCS5B01G430600 chr1A 78.606 617 63 33 589 1181 504702165 504702736 6.990000e-91 344
36 TraesCS5B01G430600 chr1D 84.983 293 13 12 889 1181 408745088 408745349 4.330000e-68 268
37 TraesCS5B01G430600 chr1D 95.556 135 6 0 1047 1181 408613191 408613325 1.590000e-52 217
38 TraesCS5B01G430600 chr1D 91.250 80 7 0 325 404 487286967 487286888 2.770000e-20 110
39 TraesCS5B01G430600 chr4B 91.613 155 12 1 2226 2379 437610966 437611120 2.060000e-51 213
40 TraesCS5B01G430600 chr4B 90.323 155 15 0 2225 2379 28485916 28485762 1.240000e-48 204
41 TraesCS5B01G430600 chr4B 90.260 154 15 0 2226 2379 240294309 240294462 4.450000e-48 202
42 TraesCS5B01G430600 chr4B 85.185 135 20 0 2081 2215 32262162 32262296 3.540000e-29 139
43 TraesCS5B01G430600 chr2D 80.345 290 45 9 2081 2367 596585308 596585028 2.660000e-50 209
44 TraesCS5B01G430600 chr2D 86.014 143 19 1 2077 2218 68920679 68920537 4.550000e-33 152
45 TraesCS5B01G430600 chr6B 90.323 155 14 1 2226 2379 567594841 567594995 4.450000e-48 202
46 TraesCS5B01G430600 chr3A 86.923 130 14 2 2094 2223 748830909 748830783 2.740000e-30 143
47 TraesCS5B01G430600 chr2A 85.401 137 19 1 2084 2220 622287676 622287541 9.840000e-30 141
48 TraesCS5B01G430600 chr4A 85.294 136 18 2 2080 2215 647049832 647049965 3.540000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G430600 chr5B 605607174 605609810 2636 True 4870.000000 4870 100.000000 1 2637 1 chr5B.!!$R3 2636
1 TraesCS5B01G430600 chr5B 605530966 605533760 2794 True 749.666667 1142 92.240667 1 1712 3 chr5B.!!$R5 1711
2 TraesCS5B01G430600 chr5B 605626191 605627500 1309 True 724.500000 952 88.439500 769 2117 2 chr5B.!!$R6 1348
3 TraesCS5B01G430600 chr5B 606828949 606829848 899 False 464.000000 466 88.329000 689 1638 2 chr5B.!!$F2 949
4 TraesCS5B01G430600 chr5D 491727239 491728225 986 False 1092.000000 1092 86.847000 627 1638 1 chr5D.!!$F3 1011
5 TraesCS5B01G430600 chr5D 490976590 490982543 5953 True 918.250000 1814 89.573500 1 1837 4 chr5D.!!$R1 1836
6 TraesCS5B01G430600 chr5D 491682213 491682785 572 False 350.000000 350 78.331000 591 1205 1 chr5D.!!$F2 614
7 TraesCS5B01G430600 chr5A 614354985 614355986 1001 False 935.000000 935 83.988000 627 1638 1 chr5A.!!$F2 1011
8 TraesCS5B01G430600 chr5A 613464826 613471794 6968 True 814.500000 1576 86.834000 1 1861 4 chr5A.!!$R1 1860
9 TraesCS5B01G430600 chr1B 550035183 550036183 1000 False 346.000000 350 82.041500 589 1645 2 chr1B.!!$F2 1056
10 TraesCS5B01G430600 chr1A 504702165 504702736 571 False 344.000000 344 78.606000 589 1181 1 chr1A.!!$F1 592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
946 6949 0.178876 TCCCATCACAGGACCCTTCA 60.179 55.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2184 14106 0.038159 GCTCCAGTGCTTGTAGTCGT 60.038 55.0 0.0 0.0 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.392921 TCGGCAAAATCTTTTTCAACCA 57.607 36.364 0.00 0.00 0.00 3.67
34 35 6.432107 TCTTTTTCAACCAATTAGCGTGTAC 58.568 36.000 0.00 0.00 0.00 2.90
58 59 8.918202 ACTTTTGGTATGATCTTAAACAGTGA 57.082 30.769 0.00 0.00 0.00 3.41
77 78 2.230992 TGAGTTGCACAAGCTTGTTGTT 59.769 40.909 29.23 13.13 39.91 2.83
78 79 2.854185 GAGTTGCACAAGCTTGTTGTTC 59.146 45.455 29.23 18.60 39.91 3.18
79 80 2.230992 AGTTGCACAAGCTTGTTGTTCA 59.769 40.909 29.23 19.86 39.91 3.18
85 86 5.180868 TGCACAAGCTTGTTGTTCAAAATTT 59.819 32.000 29.23 0.05 39.91 1.82
112 113 0.613777 AGGGTTGGATTCGACACCTC 59.386 55.000 8.26 2.80 30.88 3.85
115 116 1.676014 GGTTGGATTCGACACCTCAGG 60.676 57.143 8.26 0.00 0.00 3.86
129 130 4.210331 CACCTCAGGGATTAAAAGGATGG 58.790 47.826 0.00 0.00 36.25 3.51
131 132 4.733988 ACCTCAGGGATTAAAAGGATGGAT 59.266 41.667 0.00 0.00 36.25 3.41
133 134 6.392842 ACCTCAGGGATTAAAAGGATGGATAA 59.607 38.462 0.00 0.00 36.25 1.75
148 149 8.798975 AGGATGGATAATTAAGACTACCTTGA 57.201 34.615 0.00 0.00 36.34 3.02
185 186 0.472471 ACGCCCCAGTTCTTTTGAGA 59.528 50.000 0.00 0.00 0.00 3.27
194 195 5.043248 CCAGTTCTTTTGAGAAAAATGCGT 58.957 37.500 0.00 0.00 0.00 5.24
208 209 1.680522 ATGCGTAGGGAGGCTGTCAG 61.681 60.000 0.00 0.00 37.36 3.51
227 228 4.530857 CCTGGCGCCTTCGTAGGG 62.531 72.222 29.70 13.53 42.25 3.53
289 290 5.245301 TCTTGTACTCCTTTCTCGATTGGAA 59.755 40.000 0.00 0.00 0.00 3.53
290 291 5.477607 TGTACTCCTTTCTCGATTGGAAA 57.522 39.130 0.00 0.00 0.00 3.13
291 292 5.860611 TGTACTCCTTTCTCGATTGGAAAA 58.139 37.500 0.00 0.00 33.17 2.29
293 294 5.886960 ACTCCTTTCTCGATTGGAAAATG 57.113 39.130 0.74 0.00 33.17 2.32
335 337 5.636121 TGCATTGCATGAGAAAGCTTTAAAG 59.364 36.000 12.68 11.02 31.71 1.85
377 379 2.985896 TGAAGGCTAAATTCACCTCGG 58.014 47.619 0.00 0.00 31.86 4.63
389 391 0.949105 CACCTCGGCAAAAGCTACGT 60.949 55.000 0.00 0.00 0.00 3.57
465 470 1.815003 GCAGAGGGTCATTTGTCAAGG 59.185 52.381 0.00 0.00 0.00 3.61
469 474 4.020218 CAGAGGGTCATTTGTCAAGGACTA 60.020 45.833 15.10 0.00 42.31 2.59
509 514 2.756840 AGTGCCGGTTAGTCTTTACC 57.243 50.000 1.90 0.00 0.00 2.85
512 517 2.676342 GTGCCGGTTAGTCTTTACCATG 59.324 50.000 1.90 0.00 33.94 3.66
521 526 7.570691 CGGTTAGTCTTTACCATGTTGTTCTTC 60.571 40.741 0.00 0.00 33.94 2.87
523 528 8.496751 GTTAGTCTTTACCATGTTGTTCTTCTC 58.503 37.037 0.00 0.00 0.00 2.87
547 552 1.202818 CGGGGAGGAAATTGGAGGATC 60.203 57.143 0.00 0.00 0.00 3.36
550 555 3.435746 GGGGAGGAAATTGGAGGATCTTC 60.436 52.174 0.00 0.00 33.73 2.87
551 556 3.461458 GGGAGGAAATTGGAGGATCTTCT 59.539 47.826 4.68 0.00 33.73 2.85
553 558 5.132816 GGGAGGAAATTGGAGGATCTTCTTA 59.867 44.000 4.68 0.00 33.73 2.10
555 560 6.544197 GGAGGAAATTGGAGGATCTTCTTAAC 59.456 42.308 4.68 0.00 33.73 2.01
558 563 7.559170 AGGAAATTGGAGGATCTTCTTAACATG 59.441 37.037 4.68 0.00 33.73 3.21
559 564 7.201857 GGAAATTGGAGGATCTTCTTAACATGG 60.202 40.741 4.68 0.00 33.73 3.66
560 565 6.581388 ATTGGAGGATCTTCTTAACATGGA 57.419 37.500 4.68 0.00 33.73 3.41
561 566 5.359194 TGGAGGATCTTCTTAACATGGAC 57.641 43.478 4.68 0.00 33.73 4.02
595 600 0.611896 GCCCAAGTGCCCAACTACAT 60.612 55.000 0.00 0.00 38.56 2.29
639 1669 5.425630 AGACCACGTCTTTTCTTTTACACT 58.574 37.500 0.00 0.00 40.28 3.55
679 1713 2.680312 AACACTGATGCTGCGTATCT 57.320 45.000 0.00 0.00 0.00 1.98
685 1752 2.027385 TGATGCTGCGTATCTCTCTGT 58.973 47.619 0.00 0.00 0.00 3.41
719 6641 6.545666 TGATACCAAGGCAATACTACATTTGG 59.454 38.462 0.00 0.00 39.49 3.28
754 6676 3.355378 CATTCAACTCCCATAGCCACAA 58.645 45.455 0.00 0.00 0.00 3.33
841 6806 6.645705 CAACGGTGATAACTACGTACGTATA 58.354 40.000 26.98 18.05 38.79 1.47
891 6880 6.051717 CCACTCCCTATATATACATGCAAGC 58.948 44.000 0.00 0.00 0.00 4.01
913 6902 1.723542 CAGAGCTAGAAGCACAACACG 59.276 52.381 1.22 0.00 45.56 4.49
946 6949 0.178876 TCCCATCACAGGACCCTTCA 60.179 55.000 0.00 0.00 0.00 3.02
949 6952 0.391661 CATCACAGGACCCTTCACCG 60.392 60.000 0.00 0.00 0.00 4.94
955 6973 1.447314 GGACCCTTCACCGTTAGCG 60.447 63.158 0.00 0.00 37.95 4.26
991 7030 1.734465 CGCTAGCTTTGCTGCTTACTT 59.266 47.619 13.93 0.00 43.74 2.24
1232 13042 3.879682 GCGCATGCATCTCGCCAA 61.880 61.111 24.48 0.00 42.71 4.52
1233 13043 3.028130 CGCATGCATCTCGCCAAT 58.972 55.556 19.57 0.00 41.33 3.16
1234 13044 1.082300 CGCATGCATCTCGCCAATC 60.082 57.895 19.57 0.00 41.33 2.67
1235 13045 1.082300 GCATGCATCTCGCCAATCG 60.082 57.895 14.21 0.00 41.33 3.34
1236 13046 1.082300 CATGCATCTCGCCAATCGC 60.082 57.895 0.00 0.00 41.33 4.58
1237 13047 2.256591 ATGCATCTCGCCAATCGCC 61.257 57.895 0.00 0.00 41.33 5.54
1238 13048 2.896854 GCATCTCGCCAATCGCCA 60.897 61.111 0.00 0.00 38.27 5.69
1241 13051 0.881600 CATCTCGCCAATCGCCATGA 60.882 55.000 0.00 0.00 38.27 3.07
1298 13111 1.641577 GAATCTAAACTGCTCGCCGT 58.358 50.000 0.00 0.00 0.00 5.68
1444 13309 2.355837 GTCACGCTCGACAAGGCA 60.356 61.111 0.00 0.00 35.88 4.75
1503 13368 0.445436 CAGAACGGCATGAAGCTCAC 59.555 55.000 0.00 0.00 44.79 3.51
1528 13393 4.144727 ATCCTCGAGACCGCCCCT 62.145 66.667 15.71 0.00 35.37 4.79
1741 13645 1.000955 TGCGTTGTGTGTTGGGTTTTT 59.999 42.857 0.00 0.00 0.00 1.94
1888 13802 5.058490 AGTAAAGTTTACCAGTGCGCTTAA 58.942 37.500 19.81 0.00 0.00 1.85
1890 13804 5.447624 AAAGTTTACCAGTGCGCTTAAAT 57.552 34.783 9.73 0.00 0.00 1.40
1891 13805 5.447624 AAGTTTACCAGTGCGCTTAAATT 57.552 34.783 9.73 0.00 0.00 1.82
1936 13850 8.474025 AGTGAGATAAGATAACTGTCCAGAAAG 58.526 37.037 0.40 0.00 0.00 2.62
1940 13854 8.691797 AGATAAGATAACTGTCCAGAAAGAGAC 58.308 37.037 0.40 0.00 0.00 3.36
1943 13857 6.459923 AGATAACTGTCCAGAAAGAGACAAC 58.540 40.000 0.40 0.00 42.19 3.32
1978 13893 6.579491 GTTAACTCAACCCGTGTGATATAC 57.421 41.667 0.00 0.00 0.00 1.47
1979 13894 3.431922 ACTCAACCCGTGTGATATACG 57.568 47.619 0.00 0.00 40.98 3.06
1980 13895 2.124903 CTCAACCCGTGTGATATACGC 58.875 52.381 0.00 0.00 40.04 4.42
1986 13901 0.671796 CGTGTGATATACGCCCTCCA 59.328 55.000 0.00 0.00 36.43 3.86
1994 13909 4.836175 TGATATACGCCCTCCATTCTACAA 59.164 41.667 0.00 0.00 0.00 2.41
1995 13910 2.973694 TACGCCCTCCATTCTACAAC 57.026 50.000 0.00 0.00 0.00 3.32
1996 13911 0.981183 ACGCCCTCCATTCTACAACA 59.019 50.000 0.00 0.00 0.00 3.33
1999 13914 2.680805 CGCCCTCCATTCTACAACATGT 60.681 50.000 0.00 0.00 0.00 3.21
2037 13952 6.607735 ATCAAAATTCACAAACTTTGGCTG 57.392 33.333 6.47 0.00 34.12 4.85
2046 13961 7.759489 TCACAAACTTTGGCTGAGTTTATAT 57.241 32.000 15.08 5.37 43.44 0.86
2111 14033 5.296780 GGCGTGAAATCTTCCAATCTATTCA 59.703 40.000 0.00 0.00 0.00 2.57
2114 14036 7.041508 GCGTGAAATCTTCCAATCTATTCATCT 60.042 37.037 0.00 0.00 0.00 2.90
2134 14056 8.185003 TCATCTTTAATCATGACAGTACAACG 57.815 34.615 0.00 0.00 0.00 4.10
2135 14057 6.961359 TCTTTAATCATGACAGTACAACGG 57.039 37.500 0.00 0.00 0.00 4.44
2136 14058 5.872617 TCTTTAATCATGACAGTACAACGGG 59.127 40.000 0.00 0.00 0.00 5.28
2137 14059 2.024176 ATCATGACAGTACAACGGGC 57.976 50.000 0.00 0.00 0.00 6.13
2138 14060 0.682292 TCATGACAGTACAACGGGCA 59.318 50.000 0.00 0.00 35.36 5.36
2139 14061 0.796312 CATGACAGTACAACGGGCAC 59.204 55.000 0.00 0.00 33.22 5.01
2174 14096 6.980051 AAAAATACATTGAGGTCCGTAGAC 57.020 37.500 0.00 0.00 42.73 2.59
2184 14106 2.119801 GTCCGTAGACCACCTAGTGA 57.880 55.000 0.00 0.00 37.00 3.41
2185 14107 1.742268 GTCCGTAGACCACCTAGTGAC 59.258 57.143 0.00 0.00 37.00 3.67
2186 14108 0.731417 CCGTAGACCACCTAGTGACG 59.269 60.000 0.00 0.00 35.23 4.35
2187 14109 1.676916 CCGTAGACCACCTAGTGACGA 60.677 57.143 7.89 0.00 33.83 4.20
2188 14110 1.396301 CGTAGACCACCTAGTGACGAC 59.604 57.143 0.00 0.00 33.83 4.34
2189 14111 2.709213 GTAGACCACCTAGTGACGACT 58.291 52.381 0.00 0.00 35.23 4.18
2190 14112 3.677148 CGTAGACCACCTAGTGACGACTA 60.677 52.174 0.00 0.00 33.83 2.59
2191 14113 2.709213 AGACCACCTAGTGACGACTAC 58.291 52.381 0.00 0.00 35.23 2.73
2192 14114 2.039480 AGACCACCTAGTGACGACTACA 59.961 50.000 0.00 0.00 35.23 2.74
2193 14115 2.816087 GACCACCTAGTGACGACTACAA 59.184 50.000 0.00 0.00 35.23 2.41
2194 14116 2.818432 ACCACCTAGTGACGACTACAAG 59.182 50.000 0.00 0.00 35.23 3.16
2195 14117 2.415625 CCACCTAGTGACGACTACAAGC 60.416 54.545 0.00 0.00 35.23 4.01
2196 14118 2.228103 CACCTAGTGACGACTACAAGCA 59.772 50.000 0.00 0.00 35.23 3.91
2197 14119 2.228343 ACCTAGTGACGACTACAAGCAC 59.772 50.000 0.00 0.00 33.21 4.40
2198 14120 2.488545 CCTAGTGACGACTACAAGCACT 59.511 50.000 0.00 0.00 42.04 4.40
2199 14121 2.423926 AGTGACGACTACAAGCACTG 57.576 50.000 0.00 0.00 38.30 3.66
2200 14122 1.000163 AGTGACGACTACAAGCACTGG 60.000 52.381 0.00 0.00 38.30 4.00
2201 14123 1.000607 GTGACGACTACAAGCACTGGA 60.001 52.381 0.00 0.00 0.00 3.86
2202 14124 1.269723 TGACGACTACAAGCACTGGAG 59.730 52.381 0.00 0.00 42.47 3.86
2203 14125 0.038159 ACGACTACAAGCACTGGAGC 60.038 55.000 0.00 0.00 40.05 4.70
2204 14126 1.073216 CGACTACAAGCACTGGAGCG 61.073 60.000 0.00 0.53 40.05 5.03
2205 14127 0.243907 GACTACAAGCACTGGAGCGA 59.756 55.000 0.00 0.00 40.05 4.93
2206 14128 0.244994 ACTACAAGCACTGGAGCGAG 59.755 55.000 0.00 0.00 40.05 5.03
2207 14129 0.244994 CTACAAGCACTGGAGCGAGT 59.755 55.000 0.00 0.00 40.15 4.18
2208 14130 0.243907 TACAAGCACTGGAGCGAGTC 59.756 55.000 0.00 0.00 40.15 3.36
2209 14131 1.005748 CAAGCACTGGAGCGAGTCA 60.006 57.895 0.00 0.00 40.15 3.41
2210 14132 0.601046 CAAGCACTGGAGCGAGTCAA 60.601 55.000 0.00 0.00 40.15 3.18
2211 14133 0.106708 AAGCACTGGAGCGAGTCAAA 59.893 50.000 0.00 0.00 40.15 2.69
2212 14134 0.320247 AGCACTGGAGCGAGTCAAAG 60.320 55.000 0.00 0.00 40.15 2.77
2213 14135 1.294659 GCACTGGAGCGAGTCAAAGG 61.295 60.000 0.00 0.00 0.00 3.11
2214 14136 1.004440 ACTGGAGCGAGTCAAAGGC 60.004 57.895 0.00 0.00 0.00 4.35
2215 14137 1.004560 CTGGAGCGAGTCAAAGGCA 60.005 57.895 0.00 0.00 0.00 4.75
2216 14138 1.294659 CTGGAGCGAGTCAAAGGCAC 61.295 60.000 0.00 0.00 0.00 5.01
2217 14139 2.383527 GGAGCGAGTCAAAGGCACG 61.384 63.158 0.00 0.00 0.00 5.34
2218 14140 1.664965 GAGCGAGTCAAAGGCACGT 60.665 57.895 0.00 0.00 0.00 4.49
2219 14141 1.891060 GAGCGAGTCAAAGGCACGTG 61.891 60.000 12.28 12.28 0.00 4.49
2220 14142 2.244651 GCGAGTCAAAGGCACGTGT 61.245 57.895 18.38 0.00 0.00 4.49
2221 14143 1.853319 CGAGTCAAAGGCACGTGTC 59.147 57.895 13.44 13.44 0.00 3.67
2222 14144 1.853319 GAGTCAAAGGCACGTGTCG 59.147 57.895 18.38 1.86 0.00 4.35
2223 14145 0.874607 GAGTCAAAGGCACGTGTCGT 60.875 55.000 18.38 10.69 42.36 4.34
2224 14146 0.874607 AGTCAAAGGCACGTGTCGTC 60.875 55.000 18.38 0.96 38.32 4.20
2225 14147 0.874607 GTCAAAGGCACGTGTCGTCT 60.875 55.000 18.38 7.18 38.32 4.18
2226 14148 0.874175 TCAAAGGCACGTGTCGTCTG 60.874 55.000 18.38 14.32 38.32 3.51
2227 14149 1.143183 AAAGGCACGTGTCGTCTGT 59.857 52.632 18.38 2.53 38.32 3.41
2228 14150 0.874607 AAAGGCACGTGTCGTCTGTC 60.875 55.000 18.38 0.00 38.32 3.51
2229 14151 3.097728 GGCACGTGTCGTCTGTCG 61.098 66.667 18.38 0.00 38.32 4.35
2230 14152 3.097728 GCACGTGTCGTCTGTCGG 61.098 66.667 18.38 0.00 38.32 4.79
2231 14153 2.330393 CACGTGTCGTCTGTCGGT 59.670 61.111 7.58 0.00 38.32 4.69
2232 14154 2.009226 CACGTGTCGTCTGTCGGTG 61.009 63.158 7.58 0.00 38.32 4.94
2233 14155 2.330393 CGTGTCGTCTGTCGGTGT 59.670 61.111 0.00 0.00 40.32 4.16
2234 14156 1.724929 CGTGTCGTCTGTCGGTGTC 60.725 63.158 0.00 0.00 40.32 3.67
2235 14157 1.357690 GTGTCGTCTGTCGGTGTCA 59.642 57.895 0.00 0.00 40.32 3.58
2236 14158 0.248743 GTGTCGTCTGTCGGTGTCAA 60.249 55.000 0.00 0.00 40.32 3.18
2237 14159 0.456628 TGTCGTCTGTCGGTGTCAAA 59.543 50.000 0.00 0.00 40.32 2.69
2238 14160 1.135053 TGTCGTCTGTCGGTGTCAAAA 60.135 47.619 0.00 0.00 40.32 2.44
2239 14161 1.257155 GTCGTCTGTCGGTGTCAAAAC 59.743 52.381 0.00 0.00 40.32 2.43
2240 14162 0.580104 CGTCTGTCGGTGTCAAAACC 59.420 55.000 0.00 0.00 36.82 3.27
2246 14168 4.150994 GGTGTCAAAACCGGCAGA 57.849 55.556 0.00 0.00 0.00 4.26
2247 14169 2.641197 GGTGTCAAAACCGGCAGAT 58.359 52.632 0.00 0.00 0.00 2.90
2248 14170 0.521735 GGTGTCAAAACCGGCAGATC 59.478 55.000 0.00 0.00 0.00 2.75
2249 14171 1.523758 GTGTCAAAACCGGCAGATCT 58.476 50.000 0.00 0.00 0.00 2.75
2250 14172 1.464997 GTGTCAAAACCGGCAGATCTC 59.535 52.381 0.00 0.00 0.00 2.75
2251 14173 0.721718 GTCAAAACCGGCAGATCTCG 59.278 55.000 0.00 0.00 0.00 4.04
2255 14177 0.974010 AAACCGGCAGATCTCGGGTA 60.974 55.000 22.66 0.00 46.82 3.69
2256 14178 1.392710 AACCGGCAGATCTCGGGTAG 61.393 60.000 22.66 0.00 45.54 3.18
2257 14179 2.565645 CCGGCAGATCTCGGGTAGG 61.566 68.421 13.71 0.00 42.32 3.18
2258 14180 2.565645 CGGCAGATCTCGGGTAGGG 61.566 68.421 0.00 0.00 0.00 3.53
2259 14181 2.210711 GGCAGATCTCGGGTAGGGG 61.211 68.421 0.00 0.00 0.00 4.79
2260 14182 2.873525 GCAGATCTCGGGTAGGGGC 61.874 68.421 0.00 0.00 0.00 5.80
2261 14183 2.201771 AGATCTCGGGTAGGGGCC 59.798 66.667 0.00 0.00 0.00 5.80
2262 14184 2.923568 GATCTCGGGTAGGGGCCC 60.924 72.222 17.12 17.12 45.21 5.80
2263 14185 4.576374 ATCTCGGGTAGGGGCCCC 62.576 72.222 35.90 35.90 45.91 5.80
2266 14188 4.679003 TCGGGTAGGGGCCCCAAA 62.679 66.667 42.48 27.44 45.91 3.28
2267 14189 4.435970 CGGGTAGGGGCCCCAAAC 62.436 72.222 42.48 35.36 45.91 2.93
2268 14190 2.944954 GGGTAGGGGCCCCAAACT 60.945 66.667 42.48 24.72 42.89 2.66
2269 14191 1.620282 GGGTAGGGGCCCCAAACTA 60.620 63.158 42.48 23.51 42.89 2.24
2270 14192 0.997307 GGGTAGGGGCCCCAAACTAT 60.997 60.000 42.48 23.49 42.89 2.12
2271 14193 0.185175 GGTAGGGGCCCCAAACTATG 59.815 60.000 42.48 0.00 38.92 2.23
2272 14194 0.924090 GTAGGGGCCCCAAACTATGT 59.076 55.000 42.48 21.87 38.92 2.29
2273 14195 0.923358 TAGGGGCCCCAAACTATGTG 59.077 55.000 42.48 0.00 38.92 3.21
2274 14196 1.146544 AGGGGCCCCAAACTATGTGT 61.147 55.000 42.48 15.52 38.92 3.72
2275 14197 0.683179 GGGGCCCCAAACTATGTGTC 60.683 60.000 37.61 2.39 35.81 3.67
2276 14198 0.331616 GGGCCCCAAACTATGTGTCT 59.668 55.000 12.23 0.00 0.00 3.41
2277 14199 1.272480 GGGCCCCAAACTATGTGTCTT 60.272 52.381 12.23 0.00 0.00 3.01
2278 14200 2.025699 GGGCCCCAAACTATGTGTCTTA 60.026 50.000 12.23 0.00 0.00 2.10
2279 14201 3.279434 GGCCCCAAACTATGTGTCTTAG 58.721 50.000 0.00 0.00 0.00 2.18
2280 14202 3.279434 GCCCCAAACTATGTGTCTTAGG 58.721 50.000 0.00 0.00 0.00 2.69
2281 14203 3.054655 GCCCCAAACTATGTGTCTTAGGA 60.055 47.826 0.00 0.00 0.00 2.94
2282 14204 4.385310 GCCCCAAACTATGTGTCTTAGGAT 60.385 45.833 0.00 0.00 0.00 3.24
2283 14205 5.755849 CCCCAAACTATGTGTCTTAGGATT 58.244 41.667 0.00 0.00 0.00 3.01
2284 14206 6.634039 GCCCCAAACTATGTGTCTTAGGATTA 60.634 42.308 0.00 0.00 0.00 1.75
2285 14207 7.343357 CCCCAAACTATGTGTCTTAGGATTAA 58.657 38.462 0.00 0.00 0.00 1.40
2286 14208 7.998964 CCCCAAACTATGTGTCTTAGGATTAAT 59.001 37.037 0.00 0.00 0.00 1.40
2296 14218 9.961265 TGTGTCTTAGGATTAATAGTAACGATG 57.039 33.333 0.00 0.00 0.00 3.84
2297 14219 9.408069 GTGTCTTAGGATTAATAGTAACGATGG 57.592 37.037 0.00 0.00 0.00 3.51
2298 14220 9.358406 TGTCTTAGGATTAATAGTAACGATGGA 57.642 33.333 0.00 0.00 0.00 3.41
2299 14221 9.843334 GTCTTAGGATTAATAGTAACGATGGAG 57.157 37.037 0.00 0.00 0.00 3.86
2300 14222 9.803507 TCTTAGGATTAATAGTAACGATGGAGA 57.196 33.333 0.00 0.00 0.00 3.71
2303 14225 7.897864 AGGATTAATAGTAACGATGGAGAAGG 58.102 38.462 0.00 0.00 0.00 3.46
2304 14226 7.038941 AGGATTAATAGTAACGATGGAGAAGGG 60.039 40.741 0.00 0.00 0.00 3.95
2305 14227 7.039223 GGATTAATAGTAACGATGGAGAAGGGA 60.039 40.741 0.00 0.00 0.00 4.20
2306 14228 5.532664 AATAGTAACGATGGAGAAGGGAC 57.467 43.478 0.00 0.00 0.00 4.46
2307 14229 2.816411 AGTAACGATGGAGAAGGGACA 58.184 47.619 0.00 0.00 0.00 4.02
2308 14230 2.496470 AGTAACGATGGAGAAGGGACAC 59.504 50.000 0.00 0.00 0.00 3.67
2309 14231 1.348064 AACGATGGAGAAGGGACACA 58.652 50.000 0.00 0.00 0.00 3.72
2310 14232 1.348064 ACGATGGAGAAGGGACACAA 58.652 50.000 0.00 0.00 0.00 3.33
2311 14233 1.909302 ACGATGGAGAAGGGACACAAT 59.091 47.619 0.00 0.00 0.00 2.71
2312 14234 2.283298 CGATGGAGAAGGGACACAATG 58.717 52.381 0.00 0.00 0.00 2.82
2313 14235 2.355108 CGATGGAGAAGGGACACAATGT 60.355 50.000 0.00 0.00 0.00 2.71
2314 14236 3.690460 GATGGAGAAGGGACACAATGTT 58.310 45.455 0.00 0.00 0.00 2.71
2315 14237 3.593442 TGGAGAAGGGACACAATGTTT 57.407 42.857 0.00 0.00 0.00 2.83
2316 14238 4.715534 TGGAGAAGGGACACAATGTTTA 57.284 40.909 0.00 0.00 0.00 2.01
2317 14239 5.255397 TGGAGAAGGGACACAATGTTTAT 57.745 39.130 0.00 0.00 0.00 1.40
2318 14240 5.253330 TGGAGAAGGGACACAATGTTTATC 58.747 41.667 0.00 0.00 0.00 1.75
2319 14241 4.640647 GGAGAAGGGACACAATGTTTATCC 59.359 45.833 0.63 0.63 0.00 2.59
2320 14242 5.253330 GAGAAGGGACACAATGTTTATCCA 58.747 41.667 9.49 0.00 0.00 3.41
2321 14243 5.256474 AGAAGGGACACAATGTTTATCCAG 58.744 41.667 9.49 0.00 0.00 3.86
2322 14244 3.968265 AGGGACACAATGTTTATCCAGG 58.032 45.455 9.49 0.00 0.00 4.45
2323 14245 3.333680 AGGGACACAATGTTTATCCAGGT 59.666 43.478 9.49 0.00 0.00 4.00
2324 14246 4.086457 GGGACACAATGTTTATCCAGGTT 58.914 43.478 9.49 0.00 0.00 3.50
2325 14247 4.157840 GGGACACAATGTTTATCCAGGTTC 59.842 45.833 9.49 0.00 0.00 3.62
2326 14248 4.142687 GGACACAATGTTTATCCAGGTTCG 60.143 45.833 3.85 0.00 0.00 3.95
2327 14249 3.756434 ACACAATGTTTATCCAGGTTCGG 59.244 43.478 0.00 0.00 0.00 4.30
2328 14250 4.006989 CACAATGTTTATCCAGGTTCGGA 58.993 43.478 0.00 0.00 40.07 4.55
2330 14252 4.881850 ACAATGTTTATCCAGGTTCGGATC 59.118 41.667 0.00 0.00 42.36 3.36
2331 14253 3.553828 TGTTTATCCAGGTTCGGATCC 57.446 47.619 0.00 0.00 42.36 3.36
2332 14254 3.112263 TGTTTATCCAGGTTCGGATCCT 58.888 45.455 10.75 1.66 42.36 3.24
2333 14255 3.521937 TGTTTATCCAGGTTCGGATCCTT 59.478 43.478 10.75 0.00 42.36 3.36
2334 14256 4.018779 TGTTTATCCAGGTTCGGATCCTTT 60.019 41.667 10.75 0.00 42.36 3.11
2335 14257 4.855298 TTATCCAGGTTCGGATCCTTTT 57.145 40.909 10.75 0.00 42.36 2.27
2336 14258 5.961398 TTATCCAGGTTCGGATCCTTTTA 57.039 39.130 10.75 0.00 42.36 1.52
2337 14259 4.855298 ATCCAGGTTCGGATCCTTTTAA 57.145 40.909 10.75 0.00 42.36 1.52
2338 14260 4.855298 TCCAGGTTCGGATCCTTTTAAT 57.145 40.909 10.75 0.00 32.37 1.40
2339 14261 4.523083 TCCAGGTTCGGATCCTTTTAATG 58.477 43.478 10.75 1.69 32.37 1.90
2340 14262 4.226394 TCCAGGTTCGGATCCTTTTAATGA 59.774 41.667 10.75 0.00 32.37 2.57
2341 14263 4.947388 CCAGGTTCGGATCCTTTTAATGAA 59.053 41.667 10.75 0.84 32.37 2.57
2342 14264 5.066505 CCAGGTTCGGATCCTTTTAATGAAG 59.933 44.000 10.75 0.00 32.37 3.02
2343 14265 5.066505 CAGGTTCGGATCCTTTTAATGAAGG 59.933 44.000 10.75 0.10 46.17 3.46
2344 14266 4.948004 GGTTCGGATCCTTTTAATGAAGGT 59.052 41.667 10.75 0.00 45.24 3.50
2345 14267 6.069847 AGGTTCGGATCCTTTTAATGAAGGTA 60.070 38.462 10.75 0.00 45.24 3.08
2346 14268 6.600427 GGTTCGGATCCTTTTAATGAAGGTAA 59.400 38.462 10.75 0.00 45.24 2.85
2347 14269 7.121611 GGTTCGGATCCTTTTAATGAAGGTAAA 59.878 37.037 10.75 0.00 45.24 2.01
2348 14270 8.517056 GTTCGGATCCTTTTAATGAAGGTAAAA 58.483 33.333 10.75 0.00 45.24 1.52
2349 14271 8.047413 TCGGATCCTTTTAATGAAGGTAAAAC 57.953 34.615 10.75 0.00 45.24 2.43
2350 14272 7.121611 TCGGATCCTTTTAATGAAGGTAAAACC 59.878 37.037 10.75 0.00 45.24 3.27
2351 14273 7.553334 GGATCCTTTTAATGAAGGTAAAACCC 58.447 38.462 3.84 0.00 45.24 4.11
2352 14274 7.399191 GGATCCTTTTAATGAAGGTAAAACCCT 59.601 37.037 3.84 0.00 45.24 4.34
2353 14275 9.470399 GATCCTTTTAATGAAGGTAAAACCCTA 57.530 33.333 5.95 0.00 45.24 3.53
2354 14276 8.640063 TCCTTTTAATGAAGGTAAAACCCTAC 57.360 34.615 5.95 0.00 45.24 3.18
2355 14277 8.450434 TCCTTTTAATGAAGGTAAAACCCTACT 58.550 33.333 5.95 0.00 45.24 2.57
2356 14278 8.737175 CCTTTTAATGAAGGTAAAACCCTACTC 58.263 37.037 0.00 0.00 39.75 2.59
2357 14279 8.640063 TTTTAATGAAGGTAAAACCCTACTCC 57.360 34.615 0.00 0.00 39.75 3.85
2358 14280 7.578458 TTAATGAAGGTAAAACCCTACTCCT 57.422 36.000 0.00 0.00 39.75 3.69
2359 14281 4.903045 TGAAGGTAAAACCCTACTCCTG 57.097 45.455 0.00 0.00 39.75 3.86
2360 14282 3.008704 TGAAGGTAAAACCCTACTCCTGC 59.991 47.826 0.00 0.00 39.75 4.85
2361 14283 2.917205 AGGTAAAACCCTACTCCTGCT 58.083 47.619 0.00 0.00 39.75 4.24
2362 14284 3.257578 AGGTAAAACCCTACTCCTGCTT 58.742 45.455 0.00 0.00 39.75 3.91
2363 14285 3.009143 AGGTAAAACCCTACTCCTGCTTG 59.991 47.826 0.00 0.00 39.75 4.01
2364 14286 3.008704 GGTAAAACCCTACTCCTGCTTGA 59.991 47.826 0.00 0.00 30.04 3.02
2365 14287 4.324331 GGTAAAACCCTACTCCTGCTTGAT 60.324 45.833 0.00 0.00 30.04 2.57
2366 14288 4.388577 AAAACCCTACTCCTGCTTGATT 57.611 40.909 0.00 0.00 0.00 2.57
2367 14289 5.514500 AAAACCCTACTCCTGCTTGATTA 57.486 39.130 0.00 0.00 0.00 1.75
2368 14290 5.717119 AAACCCTACTCCTGCTTGATTAT 57.283 39.130 0.00 0.00 0.00 1.28
2369 14291 6.824958 AAACCCTACTCCTGCTTGATTATA 57.175 37.500 0.00 0.00 0.00 0.98
2370 14292 7.394144 AAACCCTACTCCTGCTTGATTATAT 57.606 36.000 0.00 0.00 0.00 0.86
2371 14293 7.394144 AACCCTACTCCTGCTTGATTATATT 57.606 36.000 0.00 0.00 0.00 1.28
2372 14294 7.010339 ACCCTACTCCTGCTTGATTATATTC 57.990 40.000 0.00 0.00 0.00 1.75
2373 14295 6.102663 CCCTACTCCTGCTTGATTATATTCG 58.897 44.000 0.00 0.00 0.00 3.34
2374 14296 6.071334 CCCTACTCCTGCTTGATTATATTCGA 60.071 42.308 0.00 0.00 0.00 3.71
2375 14297 7.032580 CCTACTCCTGCTTGATTATATTCGAG 58.967 42.308 7.31 7.31 0.00 4.04
2376 14298 5.788450 ACTCCTGCTTGATTATATTCGAGG 58.212 41.667 11.96 5.32 0.00 4.63
2377 14299 5.152623 TCCTGCTTGATTATATTCGAGGG 57.847 43.478 11.96 7.17 0.00 4.30
2378 14300 4.593206 TCCTGCTTGATTATATTCGAGGGT 59.407 41.667 11.96 0.00 0.00 4.34
2379 14301 4.932200 CCTGCTTGATTATATTCGAGGGTC 59.068 45.833 11.96 0.02 0.00 4.46
2380 14302 5.511373 CCTGCTTGATTATATTCGAGGGTCA 60.511 44.000 11.96 3.60 0.00 4.02
2381 14303 5.541845 TGCTTGATTATATTCGAGGGTCAG 58.458 41.667 11.96 0.00 0.00 3.51
2382 14304 4.932200 GCTTGATTATATTCGAGGGTCAGG 59.068 45.833 11.96 0.00 0.00 3.86
2383 14305 5.482908 CTTGATTATATTCGAGGGTCAGGG 58.517 45.833 4.53 0.00 0.00 4.45
2384 14306 4.489737 TGATTATATTCGAGGGTCAGGGT 58.510 43.478 0.00 0.00 0.00 4.34
2385 14307 4.283467 TGATTATATTCGAGGGTCAGGGTG 59.717 45.833 0.00 0.00 0.00 4.61
2386 14308 1.424638 ATATTCGAGGGTCAGGGTGG 58.575 55.000 0.00 0.00 0.00 4.61
2387 14309 0.689745 TATTCGAGGGTCAGGGTGGG 60.690 60.000 0.00 0.00 0.00 4.61
2388 14310 2.471084 ATTCGAGGGTCAGGGTGGGA 62.471 60.000 0.00 0.00 0.00 4.37
2389 14311 2.606519 CGAGGGTCAGGGTGGGAA 60.607 66.667 0.00 0.00 0.00 3.97
2390 14312 1.995626 CGAGGGTCAGGGTGGGAAT 60.996 63.158 0.00 0.00 0.00 3.01
2391 14313 1.609783 GAGGGTCAGGGTGGGAATG 59.390 63.158 0.00 0.00 0.00 2.67
2392 14314 1.926426 GAGGGTCAGGGTGGGAATGG 61.926 65.000 0.00 0.00 0.00 3.16
2393 14315 2.683475 GGTCAGGGTGGGAATGGG 59.317 66.667 0.00 0.00 0.00 4.00
2394 14316 2.043953 GTCAGGGTGGGAATGGGC 60.044 66.667 0.00 0.00 0.00 5.36
2395 14317 3.346734 TCAGGGTGGGAATGGGCC 61.347 66.667 0.00 0.00 0.00 5.80
2396 14318 3.671410 CAGGGTGGGAATGGGCCA 61.671 66.667 9.61 9.61 0.00 5.36
2397 14319 3.350163 AGGGTGGGAATGGGCCAG 61.350 66.667 13.78 0.00 0.00 4.85
2398 14320 4.463788 GGGTGGGAATGGGCCAGG 62.464 72.222 13.78 0.00 0.00 4.45
2399 14321 3.672503 GGTGGGAATGGGCCAGGT 61.673 66.667 13.78 1.32 0.00 4.00
2400 14322 2.043953 GTGGGAATGGGCCAGGTC 60.044 66.667 13.78 12.01 0.00 3.85
2401 14323 3.727258 TGGGAATGGGCCAGGTCG 61.727 66.667 13.78 0.00 0.00 4.79
2402 14324 3.407967 GGGAATGGGCCAGGTCGA 61.408 66.667 13.78 0.00 0.00 4.20
2403 14325 2.124695 GGAATGGGCCAGGTCGAC 60.125 66.667 13.78 7.13 0.00 4.20
2404 14326 2.124695 GAATGGGCCAGGTCGACC 60.125 66.667 27.67 27.67 0.00 4.79
2405 14327 3.699134 GAATGGGCCAGGTCGACCC 62.699 68.421 30.82 16.04 44.52 4.46
2408 14330 4.176752 GGGCCAGGTCGACCCATC 62.177 72.222 30.82 18.52 43.64 3.51
2420 14342 2.440247 CCCATCGGGTCTTTGGCC 60.440 66.667 0.00 0.00 38.25 5.36
2421 14343 2.440247 CCATCGGGTCTTTGGCCC 60.440 66.667 0.00 0.00 42.68 5.80
2427 14349 3.961414 GGTCTTTGGCCCGACCCA 61.961 66.667 19.89 0.00 43.05 4.51
2428 14350 2.114411 GTCTTTGGCCCGACCCAA 59.886 61.111 0.00 3.05 42.87 4.12
2429 14351 1.971695 GTCTTTGGCCCGACCCAAG 60.972 63.158 0.00 4.82 45.03 3.61
2430 14352 2.150719 TCTTTGGCCCGACCCAAGA 61.151 57.895 0.00 6.81 45.56 3.02
2431 14353 1.228429 CTTTGGCCCGACCCAAGAA 60.228 57.895 0.00 0.00 42.63 2.52
2432 14354 0.825840 CTTTGGCCCGACCCAAGAAA 60.826 55.000 0.00 0.00 42.63 2.52
2433 14355 0.397254 TTTGGCCCGACCCAAGAAAA 60.397 50.000 0.00 0.00 45.03 2.29
2434 14356 1.110518 TTGGCCCGACCCAAGAAAAC 61.111 55.000 0.00 0.00 39.85 2.43
2435 14357 1.529713 GGCCCGACCCAAGAAAACA 60.530 57.895 0.00 0.00 0.00 2.83
2436 14358 1.110518 GGCCCGACCCAAGAAAACAA 61.111 55.000 0.00 0.00 0.00 2.83
2437 14359 0.313987 GCCCGACCCAAGAAAACAAG 59.686 55.000 0.00 0.00 0.00 3.16
2438 14360 0.958822 CCCGACCCAAGAAAACAAGG 59.041 55.000 0.00 0.00 0.00 3.61
2439 14361 0.313987 CCGACCCAAGAAAACAAGGC 59.686 55.000 0.00 0.00 0.00 4.35
2440 14362 0.313987 CGACCCAAGAAAACAAGGCC 59.686 55.000 0.00 0.00 0.00 5.19
2441 14363 0.313987 GACCCAAGAAAACAAGGCCG 59.686 55.000 0.00 0.00 0.00 6.13
2442 14364 0.106419 ACCCAAGAAAACAAGGCCGA 60.106 50.000 0.00 0.00 0.00 5.54
2443 14365 1.256812 CCCAAGAAAACAAGGCCGAT 58.743 50.000 0.00 0.00 0.00 4.18
2444 14366 1.067635 CCCAAGAAAACAAGGCCGATG 60.068 52.381 9.73 9.73 0.00 3.84
2445 14367 1.067635 CCAAGAAAACAAGGCCGATGG 60.068 52.381 14.92 0.92 0.00 3.51
2446 14368 1.067635 CAAGAAAACAAGGCCGATGGG 60.068 52.381 14.92 0.00 0.00 4.00
2447 14369 0.112412 AGAAAACAAGGCCGATGGGT 59.888 50.000 14.92 0.00 34.97 4.51
2448 14370 0.526211 GAAAACAAGGCCGATGGGTC 59.474 55.000 14.92 0.00 38.61 4.46
2449 14371 0.178975 AAAACAAGGCCGATGGGTCA 60.179 50.000 14.92 0.00 41.80 4.02
2450 14372 0.609131 AAACAAGGCCGATGGGTCAG 60.609 55.000 14.92 0.00 41.80 3.51
2451 14373 1.779061 AACAAGGCCGATGGGTCAGT 61.779 55.000 14.92 0.00 41.80 3.41
2452 14374 1.450312 CAAGGCCGATGGGTCAGTC 60.450 63.158 0.00 0.00 41.80 3.51
2453 14375 3.019003 AAGGCCGATGGGTCAGTCG 62.019 63.158 0.00 0.00 41.80 4.18
2457 14379 2.494918 CGATGGGTCAGTCGGGTC 59.505 66.667 0.00 0.00 34.39 4.46
2458 14380 2.494918 GATGGGTCAGTCGGGTCG 59.505 66.667 0.00 0.00 0.00 4.79
2459 14381 3.075005 ATGGGTCAGTCGGGTCGG 61.075 66.667 0.00 0.00 0.00 4.79
2463 14385 4.131088 GTCAGTCGGGTCGGCCTC 62.131 72.222 5.77 0.00 34.45 4.70
2466 14388 4.415150 AGTCGGGTCGGCCTCGTA 62.415 66.667 5.77 0.00 37.69 3.43
2467 14389 4.185059 GTCGGGTCGGCCTCGTAC 62.185 72.222 5.77 5.06 37.69 3.67
2468 14390 4.720902 TCGGGTCGGCCTCGTACA 62.721 66.667 5.77 0.00 37.69 2.90
2469 14391 3.751246 CGGGTCGGCCTCGTACAA 61.751 66.667 5.77 0.00 37.69 2.41
2470 14392 2.658422 GGGTCGGCCTCGTACAAA 59.342 61.111 5.77 0.00 37.69 2.83
2471 14393 1.004679 GGGTCGGCCTCGTACAAAA 60.005 57.895 5.77 0.00 37.69 2.44
2472 14394 0.603439 GGGTCGGCCTCGTACAAAAA 60.603 55.000 5.77 0.00 37.69 1.94
2473 14395 1.445871 GGTCGGCCTCGTACAAAAAT 58.554 50.000 0.00 0.00 37.69 1.82
2474 14396 1.395954 GGTCGGCCTCGTACAAAAATC 59.604 52.381 0.00 0.00 37.69 2.17
2475 14397 1.060122 GTCGGCCTCGTACAAAAATCG 59.940 52.381 0.00 0.00 37.69 3.34
2476 14398 0.372334 CGGCCTCGTACAAAAATCGG 59.628 55.000 0.00 0.00 0.00 4.18
2477 14399 0.730840 GGCCTCGTACAAAAATCGGG 59.269 55.000 0.00 0.00 0.00 5.14
2478 14400 0.098200 GCCTCGTACAAAAATCGGGC 59.902 55.000 0.00 0.00 35.33 6.13
2479 14401 0.730840 CCTCGTACAAAAATCGGGCC 59.269 55.000 0.00 0.00 0.00 5.80
2480 14402 1.444836 CTCGTACAAAAATCGGGCCA 58.555 50.000 4.39 0.00 0.00 5.36
2481 14403 1.396996 CTCGTACAAAAATCGGGCCAG 59.603 52.381 4.39 0.00 0.00 4.85
2482 14404 1.161843 CGTACAAAAATCGGGCCAGT 58.838 50.000 4.39 0.00 0.00 4.00
2483 14405 2.028294 TCGTACAAAAATCGGGCCAGTA 60.028 45.455 4.39 0.00 0.00 2.74
2484 14406 2.350498 CGTACAAAAATCGGGCCAGTAG 59.650 50.000 4.39 0.00 0.00 2.57
2485 14407 2.871096 ACAAAAATCGGGCCAGTAGA 57.129 45.000 4.39 0.00 0.00 2.59
2486 14408 2.711542 ACAAAAATCGGGCCAGTAGAG 58.288 47.619 4.39 0.00 0.00 2.43
2487 14409 1.401905 CAAAAATCGGGCCAGTAGAGC 59.598 52.381 4.39 0.00 0.00 4.09
2493 14415 2.184579 GGCCAGTAGAGCCGACAC 59.815 66.667 0.00 0.00 41.41 3.67
2494 14416 2.352032 GGCCAGTAGAGCCGACACT 61.352 63.158 0.00 0.00 41.41 3.55
2495 14417 1.153745 GCCAGTAGAGCCGACACTG 60.154 63.158 0.00 0.00 39.50 3.66
2496 14418 1.595993 GCCAGTAGAGCCGACACTGA 61.596 60.000 2.63 0.00 41.80 3.41
2497 14419 0.453793 CCAGTAGAGCCGACACTGAG 59.546 60.000 2.63 0.00 41.80 3.35
2498 14420 1.169577 CAGTAGAGCCGACACTGAGT 58.830 55.000 0.00 0.00 41.80 3.41
2499 14421 1.135546 CAGTAGAGCCGACACTGAGTG 60.136 57.143 11.70 11.70 41.80 3.51
2500 14422 1.166129 GTAGAGCCGACACTGAGTGA 58.834 55.000 20.97 0.00 36.96 3.41
2501 14423 1.135632 GTAGAGCCGACACTGAGTGAC 60.136 57.143 20.97 12.58 36.96 3.67
2502 14424 1.080434 GAGCCGACACTGAGTGACC 60.080 63.158 20.97 9.44 36.96 4.02
2503 14425 2.048127 GCCGACACTGAGTGACCC 60.048 66.667 20.97 6.94 36.96 4.46
2504 14426 2.867855 GCCGACACTGAGTGACCCA 61.868 63.158 20.97 0.00 36.96 4.51
2505 14427 1.975327 CCGACACTGAGTGACCCAT 59.025 57.895 20.97 0.00 36.96 4.00
2506 14428 0.321671 CCGACACTGAGTGACCCATT 59.678 55.000 20.97 0.00 36.96 3.16
2507 14429 1.432514 CGACACTGAGTGACCCATTG 58.567 55.000 20.97 0.00 36.96 2.82
2508 14430 1.813513 GACACTGAGTGACCCATTGG 58.186 55.000 20.97 0.00 36.96 3.16
2509 14431 0.401738 ACACTGAGTGACCCATTGGG 59.598 55.000 20.97 20.71 42.12 4.12
2510 14432 3.611955 ACACTGAGTGACCCATTGGGC 62.612 57.143 22.21 14.55 40.95 5.36
2534 14456 3.917760 GGCCGACCCATCTCCGAG 61.918 72.222 0.00 0.00 0.00 4.63
2535 14457 3.148279 GCCGACCCATCTCCGAGT 61.148 66.667 0.00 0.00 0.00 4.18
2536 14458 1.826921 GCCGACCCATCTCCGAGTA 60.827 63.158 0.00 0.00 0.00 2.59
2537 14459 2.031360 CCGACCCATCTCCGAGTAC 58.969 63.158 0.00 0.00 0.00 2.73
2538 14460 0.465824 CCGACCCATCTCCGAGTACT 60.466 60.000 0.00 0.00 0.00 2.73
2539 14461 0.663688 CGACCCATCTCCGAGTACTG 59.336 60.000 0.00 0.00 0.00 2.74
2540 14462 1.033574 GACCCATCTCCGAGTACTGG 58.966 60.000 0.00 0.00 0.00 4.00
2541 14463 0.629596 ACCCATCTCCGAGTACTGGA 59.370 55.000 6.44 9.75 0.00 3.86
2546 14468 3.571748 CTCCGAGTACTGGAGTCCA 57.428 57.895 23.03 12.40 46.49 4.02
2547 14469 2.060050 CTCCGAGTACTGGAGTCCAT 57.940 55.000 23.03 5.85 46.49 3.41
2548 14470 1.950909 CTCCGAGTACTGGAGTCCATC 59.049 57.143 23.03 6.37 46.49 3.51
2549 14471 0.663688 CCGAGTACTGGAGTCCATCG 59.336 60.000 21.03 21.03 30.82 3.84
2550 14472 0.663688 CGAGTACTGGAGTCCATCGG 59.336 60.000 20.46 9.67 30.82 4.18
2551 14473 1.765230 GAGTACTGGAGTCCATCGGT 58.235 55.000 13.56 10.07 30.82 4.69
2552 14474 2.744166 CGAGTACTGGAGTCCATCGGTA 60.744 54.545 20.46 13.56 30.82 4.02
2553 14475 3.488363 GAGTACTGGAGTCCATCGGTAT 58.512 50.000 13.56 2.62 30.82 2.73
2554 14476 3.223435 AGTACTGGAGTCCATCGGTATG 58.777 50.000 13.56 1.12 30.82 2.39
2555 14477 2.454336 ACTGGAGTCCATCGGTATGA 57.546 50.000 13.56 0.00 34.84 2.15
2556 14478 2.032620 ACTGGAGTCCATCGGTATGAC 58.967 52.381 13.56 0.00 34.84 3.06
2557 14479 1.341531 CTGGAGTCCATCGGTATGACC 59.658 57.143 13.56 0.00 34.84 4.02
2558 14480 1.342574 TGGAGTCCATCGGTATGACCA 60.343 52.381 8.12 0.00 38.47 4.02
2559 14481 1.760613 GGAGTCCATCGGTATGACCAA 59.239 52.381 3.60 0.00 38.47 3.67
2560 14482 2.169769 GGAGTCCATCGGTATGACCAAA 59.830 50.000 3.60 0.00 38.47 3.28
2561 14483 3.181454 GGAGTCCATCGGTATGACCAAAT 60.181 47.826 3.60 0.00 38.47 2.32
2562 14484 4.451900 GAGTCCATCGGTATGACCAAATT 58.548 43.478 0.00 0.00 38.47 1.82
2563 14485 4.451900 AGTCCATCGGTATGACCAAATTC 58.548 43.478 0.00 0.00 38.47 2.17
2564 14486 4.080582 AGTCCATCGGTATGACCAAATTCA 60.081 41.667 0.00 0.00 38.47 2.57
2565 14487 4.821805 GTCCATCGGTATGACCAAATTCAT 59.178 41.667 0.00 0.00 38.47 2.57
2566 14488 5.049405 GTCCATCGGTATGACCAAATTCATC 60.049 44.000 0.00 0.00 38.47 2.92
2567 14489 5.065914 CCATCGGTATGACCAAATTCATCT 58.934 41.667 0.00 0.00 38.47 2.90
2568 14490 5.532406 CCATCGGTATGACCAAATTCATCTT 59.468 40.000 0.00 0.00 38.47 2.40
2569 14491 6.039717 CCATCGGTATGACCAAATTCATCTTT 59.960 38.462 0.00 0.00 38.47 2.52
2570 14492 7.228507 CCATCGGTATGACCAAATTCATCTTTA 59.771 37.037 0.00 0.00 38.47 1.85
2571 14493 7.786178 TCGGTATGACCAAATTCATCTTTAG 57.214 36.000 0.00 0.00 38.47 1.85
2572 14494 6.260050 TCGGTATGACCAAATTCATCTTTAGC 59.740 38.462 0.00 0.00 38.47 3.09
2573 14495 6.260936 CGGTATGACCAAATTCATCTTTAGCT 59.739 38.462 0.00 0.00 38.47 3.32
2574 14496 7.201732 CGGTATGACCAAATTCATCTTTAGCTT 60.202 37.037 0.00 0.00 38.47 3.74
2575 14497 7.917505 GGTATGACCAAATTCATCTTTAGCTTG 59.082 37.037 0.00 0.00 38.42 4.01
2576 14498 6.271488 TGACCAAATTCATCTTTAGCTTGG 57.729 37.500 0.00 0.00 38.23 3.61
2577 14499 5.077134 ACCAAATTCATCTTTAGCTTGGC 57.923 39.130 0.00 0.00 36.18 4.52
2578 14500 4.774200 ACCAAATTCATCTTTAGCTTGGCT 59.226 37.500 0.00 0.00 43.41 4.75
2579 14501 5.246883 ACCAAATTCATCTTTAGCTTGGCTT 59.753 36.000 0.00 0.00 40.44 4.35
2580 14502 6.437162 ACCAAATTCATCTTTAGCTTGGCTTA 59.563 34.615 0.00 0.00 40.44 3.09
2581 14503 7.124750 ACCAAATTCATCTTTAGCTTGGCTTAT 59.875 33.333 0.00 0.00 40.44 1.73
2582 14504 8.632679 CCAAATTCATCTTTAGCTTGGCTTATA 58.367 33.333 0.00 0.00 40.44 0.98
2583 14505 9.455847 CAAATTCATCTTTAGCTTGGCTTATAC 57.544 33.333 0.00 0.00 40.44 1.47
2584 14506 7.751768 ATTCATCTTTAGCTTGGCTTATACC 57.248 36.000 0.00 0.00 40.44 2.73
2585 14507 5.297547 TCATCTTTAGCTTGGCTTATACCG 58.702 41.667 0.00 0.00 40.44 4.02
2586 14508 4.748277 TCTTTAGCTTGGCTTATACCGT 57.252 40.909 0.00 0.00 40.44 4.83
2587 14509 5.093849 TCTTTAGCTTGGCTTATACCGTT 57.906 39.130 0.00 0.00 40.44 4.44
2588 14510 6.224665 TCTTTAGCTTGGCTTATACCGTTA 57.775 37.500 0.00 0.00 40.44 3.18
2589 14511 6.823497 TCTTTAGCTTGGCTTATACCGTTAT 58.177 36.000 0.00 0.00 40.44 1.89
2590 14512 7.954835 TCTTTAGCTTGGCTTATACCGTTATA 58.045 34.615 0.00 0.00 40.44 0.98
2591 14513 7.869429 TCTTTAGCTTGGCTTATACCGTTATAC 59.131 37.037 0.00 0.00 40.44 1.47
2592 14514 4.553323 AGCTTGGCTTATACCGTTATACG 58.447 43.478 0.00 0.00 37.10 3.06
2626 14548 9.790389 GCGATCAGCTAATTACAGTATACTAAT 57.210 33.333 4.74 0.00 44.04 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 7.067532 TCATACCAAAAGTACACGCTAATTG 57.932 36.000 0.00 0.00 32.46 2.32
22 23 7.769044 AGATCATACCAAAAGTACACGCTAATT 59.231 33.333 0.00 0.00 32.46 1.40
34 35 9.003658 ACTCACTGTTTAAGATCATACCAAAAG 57.996 33.333 0.00 0.00 0.00 2.27
55 56 2.187707 CAACAAGCTTGTGCAACTCAC 58.812 47.619 31.73 0.00 45.82 3.51
58 59 2.230992 TGAACAACAAGCTTGTGCAACT 59.769 40.909 31.73 13.81 41.31 3.16
79 80 9.869757 CGAATCCAACCCTATTTTCTAAATTTT 57.130 29.630 0.00 0.00 0.00 1.82
85 86 6.110707 GTGTCGAATCCAACCCTATTTTCTA 58.889 40.000 0.00 0.00 0.00 2.10
93 94 0.613777 GAGGTGTCGAATCCAACCCT 59.386 55.000 9.34 0.00 32.85 4.34
129 130 9.699703 GAGGTCATCAAGGTAGTCTTAATTATC 57.300 37.037 0.00 0.00 33.68 1.75
131 132 8.603898 TGAGGTCATCAAGGTAGTCTTAATTA 57.396 34.615 0.00 0.00 34.02 1.40
133 134 7.682787 ATGAGGTCATCAAGGTAGTCTTAAT 57.317 36.000 0.00 0.00 42.53 1.40
148 149 1.338105 CGTGTGTGGTGATGAGGTCAT 60.338 52.381 0.00 0.00 39.48 3.06
185 186 1.271926 ACAGCCTCCCTACGCATTTTT 60.272 47.619 0.00 0.00 0.00 1.94
226 227 4.279420 AGGAAGCTTTGTTCAAGATGTTCC 59.721 41.667 0.00 0.00 38.01 3.62
227 228 5.444663 AGGAAGCTTTGTTCAAGATGTTC 57.555 39.130 0.00 0.00 33.80 3.18
306 308 3.066900 GCTTTCTCATGCAATGCAGATCT 59.933 43.478 14.98 0.00 46.21 2.75
335 337 2.186826 AGTGGTTTGCACACTCGGC 61.187 57.895 2.52 0.00 45.50 5.54
377 379 6.354491 TGTCACATTCGACGTAGCTTTTGC 62.354 45.833 0.00 0.00 41.52 3.68
424 429 3.364023 GCTTATGTTCGTATTCCGATCGG 59.636 47.826 28.62 28.62 46.75 4.18
447 452 2.982488 AGTCCTTGACAAATGACCCTCT 59.018 45.455 11.84 0.00 32.93 3.69
484 489 1.180029 GACTAACCGGCACTACAGGA 58.820 55.000 0.00 0.00 37.03 3.86
486 491 3.314541 AAAGACTAACCGGCACTACAG 57.685 47.619 0.00 0.00 0.00 2.74
487 492 3.056607 GGTAAAGACTAACCGGCACTACA 60.057 47.826 0.00 0.00 0.00 2.74
488 493 3.056607 TGGTAAAGACTAACCGGCACTAC 60.057 47.826 0.00 0.00 38.70 2.73
509 514 1.136252 CCGTGCGAGAAGAACAACATG 60.136 52.381 0.00 0.00 0.00 3.21
512 517 1.566018 CCCCGTGCGAGAAGAACAAC 61.566 60.000 0.00 0.00 0.00 3.32
521 526 1.078426 AATTTCCTCCCCGTGCGAG 60.078 57.895 0.00 0.00 0.00 5.03
523 528 2.406616 CCAATTTCCTCCCCGTGCG 61.407 63.158 0.00 0.00 0.00 5.34
547 552 3.367025 GGTTCGTCGTCCATGTTAAGAAG 59.633 47.826 0.00 0.00 0.00 2.85
550 555 2.666508 CAGGTTCGTCGTCCATGTTAAG 59.333 50.000 10.61 0.00 0.00 1.85
551 556 2.610976 CCAGGTTCGTCGTCCATGTTAA 60.611 50.000 10.61 0.00 0.00 2.01
553 558 0.320421 CCAGGTTCGTCGTCCATGTT 60.320 55.000 10.61 0.00 0.00 2.71
555 560 2.100631 GCCAGGTTCGTCGTCCATG 61.101 63.158 10.61 0.00 0.00 3.66
595 600 7.230309 TGGTCTTGATTTGACACATGTTATTCA 59.770 33.333 0.00 0.00 36.26 2.57
660 1691 2.167281 AGAGATACGCAGCATCAGTGTT 59.833 45.455 0.00 0.00 0.00 3.32
722 6644 0.249699 AGTTGAATGCGTCCGTGTGA 60.250 50.000 0.00 0.00 0.00 3.58
791 6727 1.256895 CGAACGCGTCTTGTCTTTGAA 59.743 47.619 14.44 0.00 0.00 2.69
841 6806 5.767665 AGAGCTCGATCAGTAATGAGTATGT 59.232 40.000 8.37 0.00 0.00 2.29
891 6880 1.002430 TGTTGTGCTTCTAGCTCTGGG 59.998 52.381 0.00 0.00 42.97 4.45
913 6902 2.976903 GGGATGGATGCAGCTCGC 60.977 66.667 0.22 0.00 42.89 5.03
946 6949 1.374252 CTGGCTTGTCGCTAACGGT 60.374 57.895 0.00 0.00 40.63 4.83
949 6952 1.661112 GATGACTGGCTTGTCGCTAAC 59.339 52.381 6.70 0.00 39.64 2.34
955 6973 2.378028 GCGAGATGACTGGCTTGTC 58.622 57.895 0.00 4.67 42.95 3.18
991 7030 2.355108 GCTTGGAAGCCATCACTGACTA 60.355 50.000 0.00 0.00 46.20 2.59
1080 12890 2.889617 CCGACCATGTGCTCCGTA 59.110 61.111 0.00 0.00 0.00 4.02
1192 13002 2.021457 CGGGTGGTTGGATTAATGGTC 58.979 52.381 0.00 0.00 0.00 4.02
1232 13042 1.398041 CGTGTTGTGAATCATGGCGAT 59.602 47.619 0.00 0.00 35.12 4.58
1233 13043 0.795698 CGTGTTGTGAATCATGGCGA 59.204 50.000 0.00 0.00 0.00 5.54
1234 13044 0.179192 CCGTGTTGTGAATCATGGCG 60.179 55.000 0.00 0.00 34.60 5.69
1235 13045 3.700577 CCGTGTTGTGAATCATGGC 57.299 52.632 0.00 0.00 34.60 4.40
1236 13046 0.179192 CGCCGTGTTGTGAATCATGG 60.179 55.000 0.00 0.00 41.92 3.66
1237 13047 0.794229 GCGCCGTGTTGTGAATCATG 60.794 55.000 0.00 0.00 0.00 3.07
1238 13048 1.501741 GCGCCGTGTTGTGAATCAT 59.498 52.632 0.00 0.00 0.00 2.45
1241 13051 4.383602 GCGCGCCGTGTTGTGAAT 62.384 61.111 23.24 0.00 0.00 2.57
1298 13111 0.526211 ACTGCAATACACGAGAGCGA 59.474 50.000 0.00 0.00 41.64 4.93
1373 13238 2.434884 CGGCTTGGTGCACGAGAT 60.435 61.111 19.48 0.00 45.15 2.75
1444 13309 0.759346 AGAAGAACCACTTGCGTCCT 59.241 50.000 0.00 0.00 39.13 3.85
1503 13368 0.312416 GGTCTCGAGGATGGTGATCG 59.688 60.000 13.56 0.00 37.79 3.69
1697 13601 1.127766 CTCTCGATCGCTCATACTCCG 59.872 57.143 11.09 0.00 0.00 4.63
1698 13602 2.415168 CTCTCTCGATCGCTCATACTCC 59.585 54.545 11.09 0.00 0.00 3.85
1699 13603 3.064207 ACTCTCTCGATCGCTCATACTC 58.936 50.000 11.09 0.00 0.00 2.59
1700 13604 3.120321 ACTCTCTCGATCGCTCATACT 57.880 47.619 11.09 0.00 0.00 2.12
1701 13605 3.550561 CAACTCTCTCGATCGCTCATAC 58.449 50.000 11.09 0.00 0.00 2.39
1860 13774 6.534079 AGCGCACTGGTAAACTTTACTAATAG 59.466 38.462 11.47 7.52 0.00 1.73
1866 13780 3.891056 AAGCGCACTGGTAAACTTTAC 57.109 42.857 11.47 3.38 0.00 2.01
1876 13790 9.134734 TCTTTAAATAAAATTTAAGCGCACTGG 57.865 29.630 11.47 0.00 0.00 4.00
1908 13822 9.475620 TTCTGGACAGTTATCTTATCTCACTTA 57.524 33.333 0.00 0.00 0.00 2.24
1918 13832 6.672266 TGTCTCTTTCTGGACAGTTATCTT 57.328 37.500 0.00 0.00 37.52 2.40
1927 13841 3.181465 TGGACAGTTGTCTCTTTCTGGAC 60.181 47.826 11.67 0.00 44.20 4.02
1936 13850 2.919228 ACCTTTGTGGACAGTTGTCTC 58.081 47.619 11.67 6.63 44.20 3.36
1940 13854 4.638421 TGAGTTAACCTTTGTGGACAGTTG 59.362 41.667 0.88 0.00 39.71 3.16
1943 13857 5.169836 GTTGAGTTAACCTTTGTGGACAG 57.830 43.478 0.88 0.00 39.71 3.51
1978 13893 1.942657 CATGTTGTAGAATGGAGGGCG 59.057 52.381 0.00 0.00 0.00 6.13
1979 13894 3.004752 ACATGTTGTAGAATGGAGGGC 57.995 47.619 0.00 0.00 0.00 5.19
1980 13895 3.129287 GCAACATGTTGTAGAATGGAGGG 59.871 47.826 33.01 9.44 42.31 4.30
2014 13929 6.347696 TCAGCCAAAGTTTGTGAATTTTGAT 58.652 32.000 14.36 0.00 42.03 2.57
2111 14033 6.538742 CCCGTTGTACTGTCATGATTAAAGAT 59.461 38.462 0.00 0.00 0.00 2.40
2114 14036 4.393680 GCCCGTTGTACTGTCATGATTAAA 59.606 41.667 0.00 0.00 0.00 1.52
2117 14039 2.290008 TGCCCGTTGTACTGTCATGATT 60.290 45.455 0.00 0.00 0.00 2.57
2118 14040 1.277842 TGCCCGTTGTACTGTCATGAT 59.722 47.619 0.00 0.00 0.00 2.45
2119 14041 0.682292 TGCCCGTTGTACTGTCATGA 59.318 50.000 0.00 0.00 0.00 3.07
2120 14042 0.796312 GTGCCCGTTGTACTGTCATG 59.204 55.000 0.00 0.00 0.00 3.07
2121 14043 0.321298 GGTGCCCGTTGTACTGTCAT 60.321 55.000 0.00 0.00 0.00 3.06
2122 14044 1.070105 GGTGCCCGTTGTACTGTCA 59.930 57.895 0.00 0.00 0.00 3.58
2123 14045 0.949105 CTGGTGCCCGTTGTACTGTC 60.949 60.000 0.00 0.00 0.00 3.51
2124 14046 1.070786 CTGGTGCCCGTTGTACTGT 59.929 57.895 0.00 0.00 0.00 3.55
2125 14047 0.250124 TTCTGGTGCCCGTTGTACTG 60.250 55.000 0.00 0.00 0.00 2.74
2126 14048 0.470766 TTTCTGGTGCCCGTTGTACT 59.529 50.000 0.00 0.00 0.00 2.73
2127 14049 1.530323 ATTTCTGGTGCCCGTTGTAC 58.470 50.000 0.00 0.00 0.00 2.90
2128 14050 2.279935 AATTTCTGGTGCCCGTTGTA 57.720 45.000 0.00 0.00 0.00 2.41
2129 14051 2.279935 TAATTTCTGGTGCCCGTTGT 57.720 45.000 0.00 0.00 0.00 3.32
2130 14052 4.974368 TTATAATTTCTGGTGCCCGTTG 57.026 40.909 0.00 0.00 0.00 4.10
2131 14053 5.986501 TTTTATAATTTCTGGTGCCCGTT 57.013 34.783 0.00 0.00 0.00 4.44
2132 14054 5.986501 TTTTTATAATTTCTGGTGCCCGT 57.013 34.783 0.00 0.00 0.00 5.28
2151 14073 6.980051 GTCTACGGACCTCAATGTATTTTT 57.020 37.500 0.00 0.00 36.53 1.94
2165 14087 1.742268 GTCACTAGGTGGTCTACGGAC 59.258 57.143 0.00 0.00 41.43 4.79
2166 14088 1.676916 CGTCACTAGGTGGTCTACGGA 60.677 57.143 0.00 0.00 33.87 4.69
2167 14089 0.731417 CGTCACTAGGTGGTCTACGG 59.269 60.000 0.00 0.00 33.87 4.02
2168 14090 1.396301 GTCGTCACTAGGTGGTCTACG 59.604 57.143 0.00 0.00 33.87 3.51
2169 14091 2.709213 AGTCGTCACTAGGTGGTCTAC 58.291 52.381 0.00 0.00 33.87 2.59
2170 14092 3.261643 TGTAGTCGTCACTAGGTGGTCTA 59.738 47.826 0.00 0.00 35.67 2.59
2171 14093 2.039480 TGTAGTCGTCACTAGGTGGTCT 59.961 50.000 0.00 0.00 35.67 3.85
2172 14094 2.430465 TGTAGTCGTCACTAGGTGGTC 58.570 52.381 0.00 0.00 35.67 4.02
2173 14095 2.574006 TGTAGTCGTCACTAGGTGGT 57.426 50.000 0.00 0.00 35.67 4.16
2174 14096 2.415625 GCTTGTAGTCGTCACTAGGTGG 60.416 54.545 0.00 0.00 35.67 4.61
2175 14097 2.228103 TGCTTGTAGTCGTCACTAGGTG 59.772 50.000 0.00 0.00 35.67 4.00
2176 14098 2.228343 GTGCTTGTAGTCGTCACTAGGT 59.772 50.000 0.00 0.00 35.67 3.08
2177 14099 2.488545 AGTGCTTGTAGTCGTCACTAGG 59.511 50.000 0.00 0.00 35.67 3.02
2178 14100 3.493272 CAGTGCTTGTAGTCGTCACTAG 58.507 50.000 0.00 0.00 35.67 2.57
2179 14101 2.228103 CCAGTGCTTGTAGTCGTCACTA 59.772 50.000 0.00 0.00 36.37 2.74
2180 14102 1.000163 CCAGTGCTTGTAGTCGTCACT 60.000 52.381 0.00 0.00 38.40 3.41
2181 14103 1.000607 TCCAGTGCTTGTAGTCGTCAC 60.001 52.381 0.00 0.00 0.00 3.67
2182 14104 1.269723 CTCCAGTGCTTGTAGTCGTCA 59.730 52.381 0.00 0.00 0.00 4.35
2183 14105 1.983972 CTCCAGTGCTTGTAGTCGTC 58.016 55.000 0.00 0.00 0.00 4.20
2184 14106 0.038159 GCTCCAGTGCTTGTAGTCGT 60.038 55.000 0.00 0.00 0.00 4.34
2185 14107 1.073216 CGCTCCAGTGCTTGTAGTCG 61.073 60.000 0.00 0.00 0.00 4.18
2186 14108 0.243907 TCGCTCCAGTGCTTGTAGTC 59.756 55.000 0.00 0.00 0.00 2.59
2187 14109 0.244994 CTCGCTCCAGTGCTTGTAGT 59.755 55.000 0.00 0.00 0.00 2.73
2188 14110 0.244994 ACTCGCTCCAGTGCTTGTAG 59.755 55.000 0.00 0.00 0.00 2.74
2189 14111 0.243907 GACTCGCTCCAGTGCTTGTA 59.756 55.000 0.00 0.00 0.00 2.41
2190 14112 1.005630 GACTCGCTCCAGTGCTTGT 60.006 57.895 0.00 0.00 0.00 3.16
2191 14113 0.601046 TTGACTCGCTCCAGTGCTTG 60.601 55.000 0.00 0.00 0.00 4.01
2192 14114 0.106708 TTTGACTCGCTCCAGTGCTT 59.893 50.000 0.00 0.00 0.00 3.91
2193 14115 0.320247 CTTTGACTCGCTCCAGTGCT 60.320 55.000 0.00 0.00 0.00 4.40
2194 14116 1.294659 CCTTTGACTCGCTCCAGTGC 61.295 60.000 0.00 0.00 0.00 4.40
2195 14117 1.294659 GCCTTTGACTCGCTCCAGTG 61.295 60.000 0.00 0.00 0.00 3.66
2196 14118 1.004440 GCCTTTGACTCGCTCCAGT 60.004 57.895 0.00 0.00 0.00 4.00
2197 14119 1.004560 TGCCTTTGACTCGCTCCAG 60.005 57.895 0.00 0.00 0.00 3.86
2198 14120 1.301716 GTGCCTTTGACTCGCTCCA 60.302 57.895 0.00 0.00 0.00 3.86
2199 14121 2.383527 CGTGCCTTTGACTCGCTCC 61.384 63.158 0.00 0.00 0.00 4.70
2200 14122 1.664965 ACGTGCCTTTGACTCGCTC 60.665 57.895 0.00 0.00 0.00 5.03
2201 14123 1.956170 CACGTGCCTTTGACTCGCT 60.956 57.895 0.82 0.00 0.00 4.93
2202 14124 2.159272 GACACGTGCCTTTGACTCGC 62.159 60.000 17.22 0.00 0.00 5.03
2203 14125 1.853319 GACACGTGCCTTTGACTCG 59.147 57.895 17.22 0.00 0.00 4.18
2204 14126 0.874607 ACGACACGTGCCTTTGACTC 60.875 55.000 17.22 1.65 39.18 3.36
2205 14127 0.874607 GACGACACGTGCCTTTGACT 60.875 55.000 17.22 0.00 41.37 3.41
2206 14128 0.874607 AGACGACACGTGCCTTTGAC 60.875 55.000 17.22 0.74 41.37 3.18
2207 14129 0.874175 CAGACGACACGTGCCTTTGA 60.874 55.000 17.22 0.00 41.37 2.69
2208 14130 1.151777 ACAGACGACACGTGCCTTTG 61.152 55.000 17.22 10.50 41.37 2.77
2209 14131 0.874607 GACAGACGACACGTGCCTTT 60.875 55.000 17.22 0.00 41.37 3.11
2210 14132 1.299926 GACAGACGACACGTGCCTT 60.300 57.895 17.22 0.00 41.37 4.35
2211 14133 2.335369 GACAGACGACACGTGCCT 59.665 61.111 17.22 4.97 41.37 4.75
2212 14134 3.097728 CGACAGACGACACGTGCC 61.098 66.667 17.22 2.74 45.77 5.01
2213 14135 3.097728 CCGACAGACGACACGTGC 61.098 66.667 17.22 7.72 45.77 5.34
2214 14136 2.009226 CACCGACAGACGACACGTG 61.009 63.158 15.48 15.48 45.77 4.49
2215 14137 2.330393 CACCGACAGACGACACGT 59.670 61.111 0.00 0.00 45.77 4.49
2216 14138 1.724929 GACACCGACAGACGACACG 60.725 63.158 0.00 0.00 45.77 4.49
2217 14139 0.248743 TTGACACCGACAGACGACAC 60.249 55.000 0.00 0.00 45.77 3.67
2218 14140 0.456628 TTTGACACCGACAGACGACA 59.543 50.000 0.00 0.00 45.77 4.35
2219 14141 1.257155 GTTTTGACACCGACAGACGAC 59.743 52.381 0.00 0.00 45.77 4.34
2220 14142 1.563111 GTTTTGACACCGACAGACGA 58.437 50.000 0.00 0.00 45.77 4.20
2221 14143 0.580104 GGTTTTGACACCGACAGACG 59.420 55.000 0.00 0.00 42.18 4.18
2229 14151 0.521735 GATCTGCCGGTTTTGACACC 59.478 55.000 1.90 0.00 0.00 4.16
2230 14152 1.464997 GAGATCTGCCGGTTTTGACAC 59.535 52.381 0.00 0.00 0.00 3.67
2231 14153 1.808411 GAGATCTGCCGGTTTTGACA 58.192 50.000 0.00 0.00 0.00 3.58
2232 14154 0.721718 CGAGATCTGCCGGTTTTGAC 59.278 55.000 0.00 0.00 0.00 3.18
2233 14155 0.391130 CCGAGATCTGCCGGTTTTGA 60.391 55.000 13.39 0.00 40.78 2.69
2234 14156 1.369091 CCCGAGATCTGCCGGTTTTG 61.369 60.000 18.55 3.10 43.93 2.44
2235 14157 1.078426 CCCGAGATCTGCCGGTTTT 60.078 57.895 18.55 0.00 43.93 2.43
2236 14158 0.974010 TACCCGAGATCTGCCGGTTT 60.974 55.000 18.55 9.73 43.93 3.27
2237 14159 1.380785 TACCCGAGATCTGCCGGTT 60.381 57.895 18.55 9.56 43.93 4.44
2238 14160 1.828660 CTACCCGAGATCTGCCGGT 60.829 63.158 18.55 13.92 43.93 5.28
2239 14161 2.565645 CCTACCCGAGATCTGCCGG 61.566 68.421 14.42 14.42 44.94 6.13
2240 14162 2.565645 CCCTACCCGAGATCTGCCG 61.566 68.421 0.00 0.00 0.00 5.69
2241 14163 2.210711 CCCCTACCCGAGATCTGCC 61.211 68.421 0.00 0.00 0.00 4.85
2242 14164 2.873525 GCCCCTACCCGAGATCTGC 61.874 68.421 0.00 0.00 0.00 4.26
2243 14165 2.210711 GGCCCCTACCCGAGATCTG 61.211 68.421 0.00 0.00 0.00 2.90
2244 14166 2.201771 GGCCCCTACCCGAGATCT 59.798 66.667 0.00 0.00 0.00 2.75
2245 14167 2.923568 GGGCCCCTACCCGAGATC 60.924 72.222 12.23 0.00 40.98 2.75
2252 14174 0.185175 CATAGTTTGGGGCCCCTACC 59.815 60.000 40.66 27.21 36.94 3.18
2253 14175 0.924090 ACATAGTTTGGGGCCCCTAC 59.076 55.000 40.66 34.17 36.94 3.18
2254 14176 0.923358 CACATAGTTTGGGGCCCCTA 59.077 55.000 40.66 32.25 36.94 3.53
2255 14177 1.146544 ACACATAGTTTGGGGCCCCT 61.147 55.000 40.66 23.93 36.94 4.79
2256 14178 0.683179 GACACATAGTTTGGGGCCCC 60.683 60.000 36.14 36.14 25.96 5.80
2257 14179 0.331616 AGACACATAGTTTGGGGCCC 59.668 55.000 18.17 18.17 37.55 5.80
2258 14180 2.215942 AAGACACATAGTTTGGGGCC 57.784 50.000 0.00 0.00 37.55 5.80
2259 14181 3.054655 TCCTAAGACACATAGTTTGGGGC 60.055 47.826 0.00 0.00 36.81 5.80
2260 14182 4.837093 TCCTAAGACACATAGTTTGGGG 57.163 45.455 0.00 0.00 30.69 4.96
2261 14183 8.980481 ATTAATCCTAAGACACATAGTTTGGG 57.020 34.615 0.00 0.00 33.70 4.12
2270 14192 9.961265 CATCGTTACTATTAATCCTAAGACACA 57.039 33.333 0.00 0.00 0.00 3.72
2271 14193 9.408069 CCATCGTTACTATTAATCCTAAGACAC 57.592 37.037 0.00 0.00 0.00 3.67
2272 14194 9.358406 TCCATCGTTACTATTAATCCTAAGACA 57.642 33.333 0.00 0.00 0.00 3.41
2273 14195 9.843334 CTCCATCGTTACTATTAATCCTAAGAC 57.157 37.037 0.00 0.00 0.00 3.01
2274 14196 9.803507 TCTCCATCGTTACTATTAATCCTAAGA 57.196 33.333 0.00 0.00 0.00 2.10
2277 14199 9.021807 CCTTCTCCATCGTTACTATTAATCCTA 57.978 37.037 0.00 0.00 0.00 2.94
2278 14200 7.038941 CCCTTCTCCATCGTTACTATTAATCCT 60.039 40.741 0.00 0.00 0.00 3.24
2279 14201 7.039223 TCCCTTCTCCATCGTTACTATTAATCC 60.039 40.741 0.00 0.00 0.00 3.01
2280 14202 7.813627 GTCCCTTCTCCATCGTTACTATTAATC 59.186 40.741 0.00 0.00 0.00 1.75
2281 14203 7.289317 TGTCCCTTCTCCATCGTTACTATTAAT 59.711 37.037 0.00 0.00 0.00 1.40
2282 14204 6.608405 TGTCCCTTCTCCATCGTTACTATTAA 59.392 38.462 0.00 0.00 0.00 1.40
2283 14205 6.040166 GTGTCCCTTCTCCATCGTTACTATTA 59.960 42.308 0.00 0.00 0.00 0.98
2284 14206 4.960469 TGTCCCTTCTCCATCGTTACTATT 59.040 41.667 0.00 0.00 0.00 1.73
2285 14207 4.341520 GTGTCCCTTCTCCATCGTTACTAT 59.658 45.833 0.00 0.00 0.00 2.12
2286 14208 3.698040 GTGTCCCTTCTCCATCGTTACTA 59.302 47.826 0.00 0.00 0.00 1.82
2287 14209 2.496470 GTGTCCCTTCTCCATCGTTACT 59.504 50.000 0.00 0.00 0.00 2.24
2288 14210 2.232941 TGTGTCCCTTCTCCATCGTTAC 59.767 50.000 0.00 0.00 0.00 2.50
2289 14211 2.531771 TGTGTCCCTTCTCCATCGTTA 58.468 47.619 0.00 0.00 0.00 3.18
2290 14212 1.348064 TGTGTCCCTTCTCCATCGTT 58.652 50.000 0.00 0.00 0.00 3.85
2291 14213 1.348064 TTGTGTCCCTTCTCCATCGT 58.652 50.000 0.00 0.00 0.00 3.73
2292 14214 2.283298 CATTGTGTCCCTTCTCCATCG 58.717 52.381 0.00 0.00 0.00 3.84
2293 14215 3.356529 ACATTGTGTCCCTTCTCCATC 57.643 47.619 0.00 0.00 0.00 3.51
2294 14216 3.814504 AACATTGTGTCCCTTCTCCAT 57.185 42.857 0.00 0.00 0.00 3.41
2295 14217 3.593442 AAACATTGTGTCCCTTCTCCA 57.407 42.857 0.00 0.00 0.00 3.86
2296 14218 4.640647 GGATAAACATTGTGTCCCTTCTCC 59.359 45.833 0.00 0.00 0.00 3.71
2297 14219 5.253330 TGGATAAACATTGTGTCCCTTCTC 58.747 41.667 11.44 0.00 0.00 2.87
2298 14220 5.255397 TGGATAAACATTGTGTCCCTTCT 57.745 39.130 11.44 0.00 0.00 2.85
2299 14221 4.399303 CCTGGATAAACATTGTGTCCCTTC 59.601 45.833 11.44 0.00 0.00 3.46
2300 14222 4.202673 ACCTGGATAAACATTGTGTCCCTT 60.203 41.667 0.00 0.00 0.00 3.95
2301 14223 3.333680 ACCTGGATAAACATTGTGTCCCT 59.666 43.478 0.00 0.00 0.00 4.20
2302 14224 3.697166 ACCTGGATAAACATTGTGTCCC 58.303 45.455 0.00 3.53 0.00 4.46
2303 14225 4.142687 CGAACCTGGATAAACATTGTGTCC 60.143 45.833 0.00 8.45 0.00 4.02
2304 14226 4.142687 CCGAACCTGGATAAACATTGTGTC 60.143 45.833 0.00 0.00 0.00 3.67
2305 14227 3.756434 CCGAACCTGGATAAACATTGTGT 59.244 43.478 0.00 0.00 0.00 3.72
2306 14228 4.006989 TCCGAACCTGGATAAACATTGTG 58.993 43.478 0.00 0.00 31.53 3.33
2307 14229 4.295141 TCCGAACCTGGATAAACATTGT 57.705 40.909 0.00 0.00 31.53 2.71
2317 14239 4.226394 TCATTAAAAGGATCCGAACCTGGA 59.774 41.667 5.98 0.00 43.58 3.86
2318 14240 4.523083 TCATTAAAAGGATCCGAACCTGG 58.477 43.478 5.98 0.00 37.85 4.45
2319 14241 6.124088 CTTCATTAAAAGGATCCGAACCTG 57.876 41.667 5.98 1.68 37.85 4.00
2331 14253 8.737175 GGAGTAGGGTTTTACCTTCATTAAAAG 58.263 37.037 0.00 0.00 42.09 2.27
2332 14254 8.450434 AGGAGTAGGGTTTTACCTTCATTAAAA 58.550 33.333 0.00 0.00 42.09 1.52
2333 14255 7.886446 CAGGAGTAGGGTTTTACCTTCATTAAA 59.114 37.037 0.00 0.00 42.09 1.52
2334 14256 7.399634 CAGGAGTAGGGTTTTACCTTCATTAA 58.600 38.462 0.00 0.00 42.09 1.40
2335 14257 6.577638 GCAGGAGTAGGGTTTTACCTTCATTA 60.578 42.308 0.00 0.00 42.09 1.90
2336 14258 5.806734 GCAGGAGTAGGGTTTTACCTTCATT 60.807 44.000 0.00 0.00 42.09 2.57
2337 14259 4.324331 GCAGGAGTAGGGTTTTACCTTCAT 60.324 45.833 0.00 0.00 42.09 2.57
2338 14260 3.008704 GCAGGAGTAGGGTTTTACCTTCA 59.991 47.826 0.00 0.00 42.09 3.02
2339 14261 3.263681 AGCAGGAGTAGGGTTTTACCTTC 59.736 47.826 0.00 0.00 42.09 3.46
2340 14262 3.257578 AGCAGGAGTAGGGTTTTACCTT 58.742 45.455 0.00 0.00 42.09 3.50
2341 14263 2.917205 AGCAGGAGTAGGGTTTTACCT 58.083 47.619 0.00 0.00 44.75 3.08
2342 14264 3.008704 TCAAGCAGGAGTAGGGTTTTACC 59.991 47.826 0.00 0.00 37.60 2.85
2343 14265 4.281898 TCAAGCAGGAGTAGGGTTTTAC 57.718 45.455 0.00 0.00 0.00 2.01
2344 14266 5.514500 AATCAAGCAGGAGTAGGGTTTTA 57.486 39.130 0.00 0.00 0.00 1.52
2345 14267 4.388577 AATCAAGCAGGAGTAGGGTTTT 57.611 40.909 0.00 0.00 0.00 2.43
2346 14268 5.717119 ATAATCAAGCAGGAGTAGGGTTT 57.283 39.130 0.00 0.00 0.00 3.27
2347 14269 7.394144 AATATAATCAAGCAGGAGTAGGGTT 57.606 36.000 0.00 0.00 0.00 4.11
2348 14270 6.295349 CGAATATAATCAAGCAGGAGTAGGGT 60.295 42.308 0.00 0.00 0.00 4.34
2349 14271 6.071334 TCGAATATAATCAAGCAGGAGTAGGG 60.071 42.308 0.00 0.00 0.00 3.53
2350 14272 6.925211 TCGAATATAATCAAGCAGGAGTAGG 58.075 40.000 0.00 0.00 0.00 3.18
2351 14273 7.032580 CCTCGAATATAATCAAGCAGGAGTAG 58.967 42.308 0.00 0.00 0.00 2.57
2352 14274 6.071334 CCCTCGAATATAATCAAGCAGGAGTA 60.071 42.308 0.00 0.00 0.00 2.59
2353 14275 5.279708 CCCTCGAATATAATCAAGCAGGAGT 60.280 44.000 0.00 0.00 0.00 3.85
2354 14276 5.174395 CCCTCGAATATAATCAAGCAGGAG 58.826 45.833 0.00 0.00 0.00 3.69
2355 14277 4.593206 ACCCTCGAATATAATCAAGCAGGA 59.407 41.667 0.00 0.00 0.00 3.86
2356 14278 4.899502 ACCCTCGAATATAATCAAGCAGG 58.100 43.478 0.00 0.00 0.00 4.85
2357 14279 5.541845 TGACCCTCGAATATAATCAAGCAG 58.458 41.667 0.00 0.00 0.00 4.24
2358 14280 5.511373 CCTGACCCTCGAATATAATCAAGCA 60.511 44.000 0.00 0.00 0.00 3.91
2359 14281 4.932200 CCTGACCCTCGAATATAATCAAGC 59.068 45.833 0.00 0.00 0.00 4.01
2360 14282 5.012148 ACCCTGACCCTCGAATATAATCAAG 59.988 44.000 0.00 0.00 0.00 3.02
2361 14283 4.905456 ACCCTGACCCTCGAATATAATCAA 59.095 41.667 0.00 0.00 0.00 2.57
2362 14284 4.283467 CACCCTGACCCTCGAATATAATCA 59.717 45.833 0.00 0.00 0.00 2.57
2363 14285 4.322801 CCACCCTGACCCTCGAATATAATC 60.323 50.000 0.00 0.00 0.00 1.75
2364 14286 3.583086 CCACCCTGACCCTCGAATATAAT 59.417 47.826 0.00 0.00 0.00 1.28
2365 14287 2.969950 CCACCCTGACCCTCGAATATAA 59.030 50.000 0.00 0.00 0.00 0.98
2366 14288 2.605257 CCACCCTGACCCTCGAATATA 58.395 52.381 0.00 0.00 0.00 0.86
2367 14289 1.424638 CCACCCTGACCCTCGAATAT 58.575 55.000 0.00 0.00 0.00 1.28
2368 14290 0.689745 CCCACCCTGACCCTCGAATA 60.690 60.000 0.00 0.00 0.00 1.75
2369 14291 1.995626 CCCACCCTGACCCTCGAAT 60.996 63.158 0.00 0.00 0.00 3.34
2370 14292 2.606519 CCCACCCTGACCCTCGAA 60.607 66.667 0.00 0.00 0.00 3.71
2371 14293 2.471084 ATTCCCACCCTGACCCTCGA 62.471 60.000 0.00 0.00 0.00 4.04
2372 14294 1.995626 ATTCCCACCCTGACCCTCG 60.996 63.158 0.00 0.00 0.00 4.63
2373 14295 1.609783 CATTCCCACCCTGACCCTC 59.390 63.158 0.00 0.00 0.00 4.30
2374 14296 1.930656 CCATTCCCACCCTGACCCT 60.931 63.158 0.00 0.00 0.00 4.34
2375 14297 2.683475 CCATTCCCACCCTGACCC 59.317 66.667 0.00 0.00 0.00 4.46
2376 14298 2.683475 CCCATTCCCACCCTGACC 59.317 66.667 0.00 0.00 0.00 4.02
2377 14299 2.043953 GCCCATTCCCACCCTGAC 60.044 66.667 0.00 0.00 0.00 3.51
2378 14300 3.346734 GGCCCATTCCCACCCTGA 61.347 66.667 0.00 0.00 0.00 3.86
2379 14301 3.667217 CTGGCCCATTCCCACCCTG 62.667 68.421 0.00 0.00 0.00 4.45
2380 14302 3.350163 CTGGCCCATTCCCACCCT 61.350 66.667 0.00 0.00 0.00 4.34
2381 14303 4.463788 CCTGGCCCATTCCCACCC 62.464 72.222 0.00 0.00 0.00 4.61
2382 14304 3.662117 GACCTGGCCCATTCCCACC 62.662 68.421 0.00 0.00 0.00 4.61
2383 14305 2.043953 GACCTGGCCCATTCCCAC 60.044 66.667 0.00 0.00 0.00 4.61
2384 14306 3.727258 CGACCTGGCCCATTCCCA 61.727 66.667 0.00 0.00 0.00 4.37
2385 14307 3.407967 TCGACCTGGCCCATTCCC 61.408 66.667 0.00 0.00 0.00 3.97
2386 14308 2.124695 GTCGACCTGGCCCATTCC 60.125 66.667 3.51 0.00 0.00 3.01
2387 14309 2.124695 GGTCGACCTGGCCCATTC 60.125 66.667 27.64 0.00 0.00 2.67
2388 14310 3.728373 GGGTCGACCTGGCCCATT 61.728 66.667 32.52 0.00 41.93 3.16
2391 14313 4.176752 GATGGGTCGACCTGGCCC 62.177 72.222 32.52 17.44 42.64 5.80
2404 14326 2.440247 GGGCCAAAGACCCGATGG 60.440 66.667 4.39 0.00 37.67 3.51
2411 14333 2.114411 TTGGGTCGGGCCAAAGAC 59.886 61.111 4.39 10.97 39.65 3.01
2414 14336 0.397254 TTTTCTTGGGTCGGGCCAAA 60.397 50.000 4.39 0.00 39.65 3.28
2415 14337 1.110518 GTTTTCTTGGGTCGGGCCAA 61.111 55.000 4.39 0.00 39.65 4.52
2416 14338 1.529713 GTTTTCTTGGGTCGGGCCA 60.530 57.895 4.39 0.00 39.65 5.36
2417 14339 1.110518 TTGTTTTCTTGGGTCGGGCC 61.111 55.000 0.00 0.00 0.00 5.80
2418 14340 0.313987 CTTGTTTTCTTGGGTCGGGC 59.686 55.000 0.00 0.00 0.00 6.13
2419 14341 0.958822 CCTTGTTTTCTTGGGTCGGG 59.041 55.000 0.00 0.00 0.00 5.14
2420 14342 0.313987 GCCTTGTTTTCTTGGGTCGG 59.686 55.000 0.00 0.00 0.00 4.79
2421 14343 0.313987 GGCCTTGTTTTCTTGGGTCG 59.686 55.000 0.00 0.00 0.00 4.79
2422 14344 0.313987 CGGCCTTGTTTTCTTGGGTC 59.686 55.000 0.00 0.00 0.00 4.46
2423 14345 0.106419 TCGGCCTTGTTTTCTTGGGT 60.106 50.000 0.00 0.00 0.00 4.51
2424 14346 1.067635 CATCGGCCTTGTTTTCTTGGG 60.068 52.381 0.00 0.00 0.00 4.12
2425 14347 1.067635 CCATCGGCCTTGTTTTCTTGG 60.068 52.381 0.00 0.00 0.00 3.61
2426 14348 1.067635 CCCATCGGCCTTGTTTTCTTG 60.068 52.381 0.00 0.00 0.00 3.02
2427 14349 1.256812 CCCATCGGCCTTGTTTTCTT 58.743 50.000 0.00 0.00 0.00 2.52
2428 14350 0.112412 ACCCATCGGCCTTGTTTTCT 59.888 50.000 0.00 0.00 0.00 2.52
2429 14351 0.526211 GACCCATCGGCCTTGTTTTC 59.474 55.000 0.00 0.00 0.00 2.29
2430 14352 0.178975 TGACCCATCGGCCTTGTTTT 60.179 50.000 0.00 0.00 0.00 2.43
2431 14353 0.609131 CTGACCCATCGGCCTTGTTT 60.609 55.000 0.00 0.00 0.00 2.83
2432 14354 1.002134 CTGACCCATCGGCCTTGTT 60.002 57.895 0.00 0.00 0.00 2.83
2433 14355 2.185310 GACTGACCCATCGGCCTTGT 62.185 60.000 0.00 0.00 34.14 3.16
2434 14356 1.450312 GACTGACCCATCGGCCTTG 60.450 63.158 0.00 0.00 34.14 3.61
2435 14357 2.990479 GACTGACCCATCGGCCTT 59.010 61.111 0.00 0.00 34.14 4.35
2436 14358 3.461773 CGACTGACCCATCGGCCT 61.462 66.667 0.00 0.00 34.14 5.19
2440 14362 2.494918 GACCCGACTGACCCATCG 59.505 66.667 0.00 0.00 38.08 3.84
2441 14363 2.494918 CGACCCGACTGACCCATC 59.505 66.667 0.00 0.00 0.00 3.51
2442 14364 3.075005 CCGACCCGACTGACCCAT 61.075 66.667 0.00 0.00 0.00 4.00
2446 14368 4.131088 GAGGCCGACCCGACTGAC 62.131 72.222 0.00 0.00 39.21 3.51
2449 14371 4.415150 TACGAGGCCGACCCGACT 62.415 66.667 14.77 0.00 39.21 4.18
2450 14372 4.185059 GTACGAGGCCGACCCGAC 62.185 72.222 14.77 6.74 39.21 4.79
2451 14373 4.720902 TGTACGAGGCCGACCCGA 62.721 66.667 14.77 0.00 39.21 5.14
2452 14374 2.768503 TTTTGTACGAGGCCGACCCG 62.769 60.000 0.00 2.42 39.21 5.28
2453 14375 0.603439 TTTTTGTACGAGGCCGACCC 60.603 55.000 0.00 0.00 39.50 4.46
2454 14376 1.395954 GATTTTTGTACGAGGCCGACC 59.604 52.381 0.00 0.00 39.50 4.79
2455 14377 1.060122 CGATTTTTGTACGAGGCCGAC 59.940 52.381 0.00 0.00 39.50 4.79
2456 14378 1.352114 CGATTTTTGTACGAGGCCGA 58.648 50.000 0.00 0.00 39.50 5.54
2457 14379 0.372334 CCGATTTTTGTACGAGGCCG 59.628 55.000 0.00 0.00 42.50 6.13
2458 14380 0.730840 CCCGATTTTTGTACGAGGCC 59.269 55.000 0.00 0.00 0.00 5.19
2459 14381 0.098200 GCCCGATTTTTGTACGAGGC 59.902 55.000 0.00 0.00 36.72 4.70
2460 14382 0.730840 GGCCCGATTTTTGTACGAGG 59.269 55.000 0.00 0.00 0.00 4.63
2461 14383 1.396996 CTGGCCCGATTTTTGTACGAG 59.603 52.381 0.00 0.00 0.00 4.18
2462 14384 1.270947 ACTGGCCCGATTTTTGTACGA 60.271 47.619 0.00 0.00 0.00 3.43
2463 14385 1.161843 ACTGGCCCGATTTTTGTACG 58.838 50.000 0.00 0.00 0.00 3.67
2464 14386 3.602483 TCTACTGGCCCGATTTTTGTAC 58.398 45.455 0.00 0.00 0.00 2.90
2465 14387 3.869065 CTCTACTGGCCCGATTTTTGTA 58.131 45.455 0.00 0.00 0.00 2.41
2466 14388 2.711542 CTCTACTGGCCCGATTTTTGT 58.288 47.619 0.00 0.00 0.00 2.83
2467 14389 1.401905 GCTCTACTGGCCCGATTTTTG 59.598 52.381 0.00 0.00 0.00 2.44
2468 14390 1.682087 GGCTCTACTGGCCCGATTTTT 60.682 52.381 0.00 0.00 43.49 1.94
2469 14391 0.107165 GGCTCTACTGGCCCGATTTT 60.107 55.000 0.00 0.00 43.49 1.82
2470 14392 1.527370 GGCTCTACTGGCCCGATTT 59.473 57.895 0.00 0.00 43.49 2.17
2471 14393 2.797278 CGGCTCTACTGGCCCGATT 61.797 63.158 0.00 0.00 46.24 3.34
2472 14394 3.227276 CGGCTCTACTGGCCCGAT 61.227 66.667 0.00 0.00 46.24 4.18
2473 14395 4.435970 TCGGCTCTACTGGCCCGA 62.436 66.667 0.00 0.00 46.24 5.14
2474 14396 4.208686 GTCGGCTCTACTGGCCCG 62.209 72.222 0.00 0.00 46.24 6.13
2475 14397 3.075005 TGTCGGCTCTACTGGCCC 61.075 66.667 0.00 0.00 46.24 5.80
2476 14398 2.184579 GTGTCGGCTCTACTGGCC 59.815 66.667 0.00 0.00 45.57 5.36
2477 14399 1.153745 CAGTGTCGGCTCTACTGGC 60.154 63.158 0.00 0.00 38.46 4.85
2478 14400 0.453793 CTCAGTGTCGGCTCTACTGG 59.546 60.000 6.19 0.00 41.54 4.00
2479 14401 1.135546 CACTCAGTGTCGGCTCTACTG 60.136 57.143 0.00 0.00 42.34 2.74
2480 14402 1.169577 CACTCAGTGTCGGCTCTACT 58.830 55.000 0.00 0.00 0.00 2.57
2481 14403 1.135632 GTCACTCAGTGTCGGCTCTAC 60.136 57.143 4.28 0.00 34.79 2.59
2482 14404 1.166129 GTCACTCAGTGTCGGCTCTA 58.834 55.000 4.28 0.00 34.79 2.43
2483 14405 1.528292 GGTCACTCAGTGTCGGCTCT 61.528 60.000 4.28 0.00 34.79 4.09
2484 14406 1.080434 GGTCACTCAGTGTCGGCTC 60.080 63.158 4.28 0.00 34.79 4.70
2485 14407 2.574955 GGGTCACTCAGTGTCGGCT 61.575 63.158 4.28 0.00 34.79 5.52
2486 14408 2.048127 GGGTCACTCAGTGTCGGC 60.048 66.667 4.28 0.00 34.79 5.54
2487 14409 0.321671 AATGGGTCACTCAGTGTCGG 59.678 55.000 4.28 0.00 34.79 4.79
2488 14410 1.432514 CAATGGGTCACTCAGTGTCG 58.567 55.000 4.28 0.00 34.79 4.35
2489 14411 1.611673 CCCAATGGGTCACTCAGTGTC 60.612 57.143 10.91 0.00 38.25 3.67
2490 14412 0.401738 CCCAATGGGTCACTCAGTGT 59.598 55.000 10.91 0.00 38.25 3.55
2491 14413 0.962356 GCCCAATGGGTCACTCAGTG 60.962 60.000 21.02 0.00 46.51 3.66
2492 14414 1.380302 GCCCAATGGGTCACTCAGT 59.620 57.895 21.02 0.00 46.51 3.41
2493 14415 4.326255 GCCCAATGGGTCACTCAG 57.674 61.111 21.02 0.00 46.51 3.35
2500 14422 4.387343 CCTGCTGGCCCAATGGGT 62.387 66.667 21.02 0.00 46.51 4.51
2517 14439 3.917760 CTCGGAGATGGGTCGGCC 61.918 72.222 0.00 0.00 33.89 6.13
2518 14440 1.826921 TACTCGGAGATGGGTCGGC 60.827 63.158 12.86 0.00 33.89 5.54
2519 14441 0.465824 AGTACTCGGAGATGGGTCGG 60.466 60.000 12.86 0.00 33.89 4.79
2520 14442 0.663688 CAGTACTCGGAGATGGGTCG 59.336 60.000 12.86 0.00 33.89 4.79
2521 14443 1.033574 CCAGTACTCGGAGATGGGTC 58.966 60.000 12.86 0.00 33.89 4.46
2522 14444 0.629596 TCCAGTACTCGGAGATGGGT 59.370 55.000 12.86 0.00 33.89 4.51
2523 14445 3.515059 TCCAGTACTCGGAGATGGG 57.485 57.895 12.86 7.60 33.89 4.00
2529 14451 1.746171 CGATGGACTCCAGTACTCGGA 60.746 57.143 9.96 11.89 36.75 4.55
2530 14452 0.663688 CGATGGACTCCAGTACTCGG 59.336 60.000 9.96 0.00 36.75 4.63
2531 14453 0.663688 CCGATGGACTCCAGTACTCG 59.336 60.000 10.64 10.64 36.75 4.18
2532 14454 1.765230 ACCGATGGACTCCAGTACTC 58.235 55.000 3.62 0.00 36.75 2.59
2533 14455 3.117625 TCATACCGATGGACTCCAGTACT 60.118 47.826 3.62 0.00 36.75 2.73
2534 14456 3.004524 GTCATACCGATGGACTCCAGTAC 59.995 52.174 3.62 0.00 36.75 2.73
2535 14457 3.220110 GTCATACCGATGGACTCCAGTA 58.780 50.000 3.62 1.30 36.75 2.74
2536 14458 2.032620 GTCATACCGATGGACTCCAGT 58.967 52.381 3.62 0.00 36.75 4.00
2537 14459 1.341531 GGTCATACCGATGGACTCCAG 59.658 57.143 3.62 0.00 36.75 3.86
2538 14460 1.342574 TGGTCATACCGATGGACTCCA 60.343 52.381 0.00 0.00 42.58 3.86
2539 14461 1.410004 TGGTCATACCGATGGACTCC 58.590 55.000 0.00 0.00 42.58 3.85
2540 14462 3.536956 TTTGGTCATACCGATGGACTC 57.463 47.619 0.00 0.00 42.58 3.36
2541 14463 4.080582 TGAATTTGGTCATACCGATGGACT 60.081 41.667 0.00 0.00 42.58 3.85
2542 14464 4.196193 TGAATTTGGTCATACCGATGGAC 58.804 43.478 0.00 0.00 42.58 4.02
2543 14465 4.495690 TGAATTTGGTCATACCGATGGA 57.504 40.909 0.00 0.00 42.58 3.41
2544 14466 5.065914 AGATGAATTTGGTCATACCGATGG 58.934 41.667 0.00 0.00 42.58 3.51
2545 14467 6.624352 AAGATGAATTTGGTCATACCGATG 57.376 37.500 0.00 0.00 42.58 3.84
2546 14468 7.041098 GCTAAAGATGAATTTGGTCATACCGAT 60.041 37.037 0.00 0.00 42.58 4.18
2547 14469 6.260050 GCTAAAGATGAATTTGGTCATACCGA 59.740 38.462 0.00 0.00 42.58 4.69
2548 14470 6.260936 AGCTAAAGATGAATTTGGTCATACCG 59.739 38.462 0.00 0.00 42.58 4.02
2549 14471 7.573968 AGCTAAAGATGAATTTGGTCATACC 57.426 36.000 0.00 0.00 38.38 2.73
2550 14472 7.917505 CCAAGCTAAAGATGAATTTGGTCATAC 59.082 37.037 0.00 0.00 38.38 2.39
2551 14473 7.416664 GCCAAGCTAAAGATGAATTTGGTCATA 60.417 37.037 0.00 0.00 38.38 2.15
2552 14474 6.628844 GCCAAGCTAAAGATGAATTTGGTCAT 60.629 38.462 0.00 0.00 41.01 3.06
2553 14475 5.336690 GCCAAGCTAAAGATGAATTTGGTCA 60.337 40.000 0.00 0.00 36.76 4.02
2554 14476 5.105063 GCCAAGCTAAAGATGAATTTGGTC 58.895 41.667 0.00 0.00 36.76 4.02
2555 14477 4.774200 AGCCAAGCTAAAGATGAATTTGGT 59.226 37.500 0.00 0.00 36.99 3.67
2556 14478 5.334724 AGCCAAGCTAAAGATGAATTTGG 57.665 39.130 0.00 0.00 36.99 3.28
2557 14479 9.455847 GTATAAGCCAAGCTAAAGATGAATTTG 57.544 33.333 0.00 0.00 38.25 2.32
2558 14480 8.633561 GGTATAAGCCAAGCTAAAGATGAATTT 58.366 33.333 0.00 0.00 38.25 1.82
2559 14481 7.041098 CGGTATAAGCCAAGCTAAAGATGAATT 60.041 37.037 0.00 0.00 38.25 2.17
2560 14482 6.428159 CGGTATAAGCCAAGCTAAAGATGAAT 59.572 38.462 0.00 0.00 38.25 2.57
2561 14483 5.758296 CGGTATAAGCCAAGCTAAAGATGAA 59.242 40.000 0.00 0.00 38.25 2.57
2562 14484 5.163343 ACGGTATAAGCCAAGCTAAAGATGA 60.163 40.000 0.00 0.00 38.25 2.92
2563 14485 5.057149 ACGGTATAAGCCAAGCTAAAGATG 58.943 41.667 0.00 0.00 38.25 2.90
2564 14486 5.291905 ACGGTATAAGCCAAGCTAAAGAT 57.708 39.130 0.00 0.00 38.25 2.40
2565 14487 4.748277 ACGGTATAAGCCAAGCTAAAGA 57.252 40.909 0.00 0.00 38.25 2.52
2566 14488 7.148853 CGTATAACGGTATAAGCCAAGCTAAAG 60.149 40.741 0.72 0.00 36.36 1.85
2567 14489 6.642131 CGTATAACGGTATAAGCCAAGCTAAA 59.358 38.462 0.72 0.00 36.36 1.85
2568 14490 6.151691 CGTATAACGGTATAAGCCAAGCTAA 58.848 40.000 0.72 0.00 36.36 3.09
2569 14491 5.702865 CGTATAACGGTATAAGCCAAGCTA 58.297 41.667 0.72 0.00 36.36 3.32
2570 14492 4.553323 CGTATAACGGTATAAGCCAAGCT 58.447 43.478 0.72 0.00 38.15 3.74
2571 14493 4.898328 CGTATAACGGTATAAGCCAAGC 57.102 45.455 0.72 0.00 38.08 4.01
2584 14506 2.109609 TCGCTAGTTGCCGTATAACG 57.890 50.000 0.00 0.00 42.11 3.18
2585 14507 3.635331 TGATCGCTAGTTGCCGTATAAC 58.365 45.455 0.00 0.00 38.78 1.89
2586 14508 3.855895 GCTGATCGCTAGTTGCCGTATAA 60.856 47.826 2.84 0.00 38.78 0.98
2587 14509 2.351447 GCTGATCGCTAGTTGCCGTATA 60.351 50.000 2.84 0.00 38.78 1.47
2588 14510 1.603172 GCTGATCGCTAGTTGCCGTAT 60.603 52.381 2.84 0.00 38.78 3.06
2589 14511 0.248907 GCTGATCGCTAGTTGCCGTA 60.249 55.000 2.84 0.00 38.78 4.02
2590 14512 1.519455 GCTGATCGCTAGTTGCCGT 60.519 57.895 2.84 0.00 38.78 5.68
2591 14513 3.313750 GCTGATCGCTAGTTGCCG 58.686 61.111 2.84 0.00 38.78 5.69
2600 14522 9.790389 ATTAGTATACTGTAATTAGCTGATCGC 57.210 33.333 15.90 1.92 39.57 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.