Multiple sequence alignment - TraesCS5B01G425100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G425100 chr5B 100.000 3834 0 0 1 3834 601323908 601327741 0.000000e+00 7081.0
1 TraesCS5B01G425100 chr5B 90.062 161 5 1 3616 3765 538681070 538681230 8.400000e-47 198.0
2 TraesCS5B01G425100 chr5B 96.667 60 2 0 3556 3615 601327523 601327582 2.440000e-17 100.0
3 TraesCS5B01G425100 chr5D 94.876 1854 80 8 613 2464 488342310 488344150 0.000000e+00 2883.0
4 TraesCS5B01G425100 chr5D 91.908 1174 70 16 2463 3615 488344216 488345385 0.000000e+00 1618.0
5 TraesCS5B01G425100 chr5D 88.208 212 9 3 3616 3816 488345326 488345532 4.950000e-59 239.0
6 TraesCS5B01G425100 chr5D 89.697 165 6 1 3612 3765 329159108 329158944 2.340000e-47 200.0
7 TraesCS5B01G425100 chr5D 89.697 165 6 1 3612 3765 503300772 503300936 2.340000e-47 200.0
8 TraesCS5B01G425100 chr5D 89.091 165 7 1 3612 3765 6267112 6266948 1.090000e-45 195.0
9 TraesCS5B01G425100 chr5D 89.091 165 7 1 3612 3765 12937959 12938123 1.090000e-45 195.0
10 TraesCS5B01G425100 chr5D 94.737 38 1 1 3798 3834 539915834 539915871 1.490000e-04 58.4
11 TraesCS5B01G425100 chr5A 94.505 1638 68 11 1525 3149 609194484 609196112 0.000000e+00 2507.0
12 TraesCS5B01G425100 chr5A 93.082 795 44 8 555 1347 609193653 609194438 0.000000e+00 1153.0
13 TraesCS5B01G425100 chr5A 87.793 213 11 5 3616 3817 609196375 609196583 6.400000e-58 235.0
14 TraesCS5B01G425100 chr5A 87.437 199 13 5 3190 3376 609196112 609196310 6.450000e-53 219.0
15 TraesCS5B01G425100 chr5A 96.296 54 1 1 1379 1432 609194435 609194487 1.900000e-13 87.9
16 TraesCS5B01G425100 chr5A 100.000 29 0 0 3806 3834 496306840 496306812 2.000000e-03 54.7
17 TraesCS5B01G425100 chr3D 95.714 350 12 2 1 347 357639650 357639301 9.300000e-156 560.0
18 TraesCS5B01G425100 chr3D 93.258 356 20 3 1 353 97614287 97614641 4.390000e-144 521.0
19 TraesCS5B01G425100 chr6B 93.664 363 19 3 1 360 8969724 8969363 1.210000e-149 540.0
20 TraesCS5B01G425100 chr3B 93.838 357 13 3 1110 1466 807041895 807042242 2.620000e-146 529.0
21 TraesCS5B01G425100 chr3B 93.036 359 21 3 1 356 459251934 459251577 4.390000e-144 521.0
22 TraesCS5B01G425100 chr3B 93.277 357 15 2 1110 1466 807015963 807016310 5.680000e-143 518.0
23 TraesCS5B01G425100 chr3B 90.683 161 4 1 3616 3765 101911309 101911149 1.810000e-48 204.0
24 TraesCS5B01G425100 chr7B 91.484 364 19 7 1 353 483166890 483166528 1.240000e-134 490.0
25 TraesCS5B01G425100 chr7B 80.548 365 52 11 1 353 3327863 3327506 2.940000e-66 263.0
26 TraesCS5B01G425100 chr7B 95.890 73 3 0 3612 3684 731339564 731339636 6.730000e-23 119.0
27 TraesCS5B01G425100 chr3A 90.959 365 16 7 1 353 673097938 673097579 3.470000e-130 475.0
28 TraesCS5B01G425100 chr3A 89.441 161 6 1 3616 3765 69384843 69384683 3.910000e-45 193.0
29 TraesCS5B01G425100 chr3A 94.737 114 6 0 3330 3443 593314906 593314793 1.090000e-40 178.0
30 TraesCS5B01G425100 chr4B 90.704 355 24 2 1112 1466 195144288 195143943 7.500000e-127 464.0
31 TraesCS5B01G425100 chr4B 95.455 88 4 0 3443 3530 209120041 209119954 1.440000e-29 141.0
32 TraesCS5B01G425100 chr4B 100.000 29 0 0 3806 3834 2380562 2380534 2.000000e-03 54.7
33 TraesCS5B01G425100 chr4B 100.000 29 0 0 3806 3834 628302488 628302516 2.000000e-03 54.7
34 TraesCS5B01G425100 chr1B 87.778 360 35 8 1 354 94622710 94623066 2.760000e-111 412.0
35 TraesCS5B01G425100 chr1B 90.291 309 24 5 1 306 94601371 94601676 2.150000e-107 399.0
36 TraesCS5B01G425100 chr1B 100.000 29 0 0 3806 3834 206951389 206951361 2.000000e-03 54.7
37 TraesCS5B01G425100 chr1D 89.697 165 6 1 3612 3765 254443904 254444068 2.340000e-47 200.0
38 TraesCS5B01G425100 chr4D 90.062 161 5 1 3616 3765 19877329 19877489 8.400000e-47 198.0
39 TraesCS5B01G425100 chr4D 96.970 33 1 0 3802 3834 318476415 318476383 5.350000e-04 56.5
40 TraesCS5B01G425100 chrUn 94.737 114 6 0 3330 3443 182429276 182429163 1.090000e-40 178.0
41 TraesCS5B01G425100 chrUn 94.737 114 6 0 3330 3443 414425553 414425666 1.090000e-40 178.0
42 TraesCS5B01G425100 chrUn 95.455 88 4 0 3443 3530 182429192 182429105 1.440000e-29 141.0
43 TraesCS5B01G425100 chrUn 95.455 88 4 0 3443 3530 231556596 231556683 1.440000e-29 141.0
44 TraesCS5B01G425100 chrUn 95.455 88 4 0 3443 3530 273331531 273331444 1.440000e-29 141.0
45 TraesCS5B01G425100 chrUn 95.455 88 4 0 3443 3530 312036833 312036920 1.440000e-29 141.0
46 TraesCS5B01G425100 chrUn 95.455 88 4 0 3443 3530 414425637 414425724 1.440000e-29 141.0
47 TraesCS5B01G425100 chr7A 94.737 114 6 0 3330 3443 60217124 60217237 1.090000e-40 178.0
48 TraesCS5B01G425100 chr7A 97.222 72 2 0 3616 3687 167574246 167574317 5.200000e-24 122.0
49 TraesCS5B01G425100 chr7A 100.000 30 0 0 3805 3834 700811594 700811565 5.350000e-04 56.5
50 TraesCS5B01G425100 chr6D 94.737 114 6 0 3330 3443 458914666 458914779 1.090000e-40 178.0
51 TraesCS5B01G425100 chr6D 95.455 88 4 0 3443 3530 458914750 458914837 1.440000e-29 141.0
52 TraesCS5B01G425100 chr4A 94.737 114 6 0 3330 3443 67539628 67539741 1.090000e-40 178.0
53 TraesCS5B01G425100 chr2B 94.737 114 6 0 3330 3443 234527479 234527592 1.090000e-40 178.0
54 TraesCS5B01G425100 chr2B 94.737 114 6 0 3330 3443 449186533 449186646 1.090000e-40 178.0
55 TraesCS5B01G425100 chr2B 93.056 72 5 0 2600 2671 347078232 347078161 5.240000e-19 106.0
56 TraesCS5B01G425100 chr2B 100.000 29 0 0 3806 3834 299552474 299552502 2.000000e-03 54.7
57 TraesCS5B01G425100 chr2D 89.051 137 4 3 3612 3737 59896502 59896638 3.960000e-35 159.0
58 TraesCS5B01G425100 chr2D 91.781 73 6 0 2599 2671 245379023 245379095 6.780000e-18 102.0
59 TraesCS5B01G425100 chr2D 100.000 30 0 0 3805 3834 481987631 481987602 5.350000e-04 56.5
60 TraesCS5B01G425100 chr7D 95.455 88 4 0 3443 3530 6945670 6945583 1.440000e-29 141.0
61 TraesCS5B01G425100 chr6A 97.500 80 2 0 3686 3765 592504082 592504161 1.860000e-28 137.0
62 TraesCS5B01G425100 chr1A 94.318 88 5 0 3528 3615 154075449 154075536 6.680000e-28 135.0
63 TraesCS5B01G425100 chr2A 91.781 73 6 0 2599 2671 256127529 256127601 6.780000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G425100 chr5B 601323908 601327741 3833 False 3590.50 7081 98.3335 1 3834 2 chr5B.!!$F2 3833
1 TraesCS5B01G425100 chr5D 488342310 488345532 3222 False 1580.00 2883 91.6640 613 3816 3 chr5D.!!$F4 3203
2 TraesCS5B01G425100 chr5A 609193653 609196583 2930 False 840.38 2507 91.8226 555 3817 5 chr5A.!!$F1 3262

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
456 457 0.106149 AACAAAACCGAGAGTCGCCT 59.894 50.0 0.00 0.00 38.82 5.52 F
457 458 0.106149 ACAAAACCGAGAGTCGCCTT 59.894 50.0 0.00 0.00 38.82 4.35 F
1079 1081 0.179200 GCGCCGTGTATTTGTCTTGG 60.179 55.0 0.00 0.00 0.00 3.61 F
2219 2231 0.035317 TCACTGTGCCTAGTGCCAAG 59.965 55.0 11.43 2.13 45.94 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1581 1583 1.051812 AGCATCCTCTATCCGGTTGG 58.948 55.000 0.00 0.0 0.00 3.77 R
1717 1726 3.302555 GCAATGCATCACATAATGACCG 58.697 45.455 0.00 0.0 41.24 4.79 R
2541 2622 2.094675 CCAGCTTCCATACAAGGTTGG 58.905 52.381 0.00 0.0 31.60 3.77 R
3614 3752 1.065926 AGCGCACTCTTCATCAATCCA 60.066 47.619 11.47 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 9.886132 TCTCCATCTATAAGTTTAAAGTTGGAC 57.114 33.333 16.89 0.00 34.46 4.02
56 57 8.712285 TCCATCTATAAGTTTAAAGTTGGACG 57.288 34.615 16.89 6.47 34.46 4.79
57 58 7.767198 TCCATCTATAAGTTTAAAGTTGGACGG 59.233 37.037 16.89 13.37 34.46 4.79
58 59 7.767198 CCATCTATAAGTTTAAAGTTGGACGGA 59.233 37.037 16.89 8.96 32.75 4.69
59 60 9.158233 CATCTATAAGTTTAAAGTTGGACGGAA 57.842 33.333 16.89 0.00 0.00 4.30
60 61 9.901172 ATCTATAAGTTTAAAGTTGGACGGAAT 57.099 29.630 16.89 4.78 0.00 3.01
67 68 9.471084 AGTTTAAAGTTGGACGGAATAAAAATG 57.529 29.630 0.00 0.00 0.00 2.32
68 69 7.876896 TTAAAGTTGGACGGAATAAAAATGC 57.123 32.000 0.00 0.00 0.00 3.56
69 70 5.461032 AAGTTGGACGGAATAAAAATGCA 57.539 34.783 0.00 0.00 0.00 3.96
70 71 5.659440 AGTTGGACGGAATAAAAATGCAT 57.341 34.783 0.00 0.00 0.00 3.96
71 72 5.410067 AGTTGGACGGAATAAAAATGCATG 58.590 37.500 0.00 0.00 0.00 4.06
72 73 3.779759 TGGACGGAATAAAAATGCATGC 58.220 40.909 11.82 11.82 0.00 4.06
73 74 3.194329 TGGACGGAATAAAAATGCATGCA 59.806 39.130 25.04 25.04 0.00 3.96
74 75 4.141981 TGGACGGAATAAAAATGCATGCAT 60.142 37.500 27.46 27.46 38.46 3.96
75 76 4.209703 GGACGGAATAAAAATGCATGCATG 59.790 41.667 32.79 22.70 36.68 4.06
76 77 5.008619 ACGGAATAAAAATGCATGCATGA 57.991 34.783 32.79 18.63 36.68 3.07
77 78 4.805192 ACGGAATAAAAATGCATGCATGAC 59.195 37.500 32.79 20.41 36.68 3.06
78 79 5.045215 CGGAATAAAAATGCATGCATGACT 58.955 37.500 32.79 20.93 36.68 3.41
79 80 5.174398 CGGAATAAAAATGCATGCATGACTC 59.826 40.000 32.79 20.91 36.68 3.36
80 81 6.044046 GGAATAAAAATGCATGCATGACTCA 58.956 36.000 32.79 18.45 36.68 3.41
81 82 6.019318 GGAATAAAAATGCATGCATGACTCAC 60.019 38.462 32.79 19.78 36.68 3.51
82 83 4.530710 AAAAATGCATGCATGACTCACT 57.469 36.364 32.79 13.35 36.68 3.41
83 84 4.530710 AAAATGCATGCATGACTCACTT 57.469 36.364 32.79 18.50 36.68 3.16
84 85 4.530710 AAATGCATGCATGACTCACTTT 57.469 36.364 32.79 18.44 36.68 2.66
85 86 4.530710 AATGCATGCATGACTCACTTTT 57.469 36.364 32.79 11.83 36.68 2.27
86 87 3.564235 TGCATGCATGACTCACTTTTC 57.436 42.857 30.64 8.66 0.00 2.29
87 88 3.151554 TGCATGCATGACTCACTTTTCT 58.848 40.909 30.64 0.00 0.00 2.52
88 89 3.570975 TGCATGCATGACTCACTTTTCTT 59.429 39.130 30.64 0.00 0.00 2.52
89 90 4.038282 TGCATGCATGACTCACTTTTCTTT 59.962 37.500 30.64 0.00 0.00 2.52
90 91 4.620184 GCATGCATGACTCACTTTTCTTTC 59.380 41.667 30.64 2.47 0.00 2.62
91 92 5.765176 CATGCATGACTCACTTTTCTTTCA 58.235 37.500 22.59 0.00 0.00 2.69
92 93 6.387465 CATGCATGACTCACTTTTCTTTCAT 58.613 36.000 22.59 0.00 0.00 2.57
93 94 7.532571 CATGCATGACTCACTTTTCTTTCATA 58.467 34.615 22.59 0.00 0.00 2.15
94 95 7.692460 TGCATGACTCACTTTTCTTTCATAT 57.308 32.000 0.00 0.00 0.00 1.78
95 96 8.791327 TGCATGACTCACTTTTCTTTCATATA 57.209 30.769 0.00 0.00 0.00 0.86
96 97 9.399797 TGCATGACTCACTTTTCTTTCATATAT 57.600 29.630 0.00 0.00 0.00 0.86
116 117 9.911138 CATATATAGATCACTCAGGTATCATGC 57.089 37.037 0.00 0.00 0.00 4.06
117 118 9.880254 ATATATAGATCACTCAGGTATCATGCT 57.120 33.333 0.00 0.00 0.00 3.79
119 120 9.880254 ATATAGATCACTCAGGTATCATGCTAT 57.120 33.333 0.00 0.00 0.00 2.97
120 121 6.283544 AGATCACTCAGGTATCATGCTATG 57.716 41.667 0.00 0.00 0.00 2.23
121 122 6.015282 AGATCACTCAGGTATCATGCTATGA 58.985 40.000 0.00 2.05 44.55 2.15
122 123 5.718724 TCACTCAGGTATCATGCTATGAG 57.281 43.478 5.89 5.89 43.53 2.90
123 124 4.021632 TCACTCAGGTATCATGCTATGAGC 60.022 45.833 6.97 0.00 43.53 4.26
124 125 4.021280 CACTCAGGTATCATGCTATGAGCT 60.021 45.833 6.97 0.00 43.53 4.09
125 126 4.021280 ACTCAGGTATCATGCTATGAGCTG 60.021 45.833 0.00 6.22 43.53 4.24
126 127 3.001414 CAGGTATCATGCTATGAGCTGC 58.999 50.000 0.00 0.00 43.53 5.25
127 128 2.636403 AGGTATCATGCTATGAGCTGCA 59.364 45.455 1.02 0.00 43.53 4.41
131 132 3.414486 ATGCTATGAGCTGCATGCA 57.586 47.368 21.29 21.29 46.58 3.96
132 133 0.952280 ATGCTATGAGCTGCATGCAC 59.048 50.000 18.46 13.93 46.58 4.57
133 134 1.278937 GCTATGAGCTGCATGCACG 59.721 57.895 18.46 14.14 45.94 5.34
134 135 1.278937 CTATGAGCTGCATGCACGC 59.721 57.895 25.32 25.32 45.94 5.34
135 136 2.425950 CTATGAGCTGCATGCACGCG 62.426 60.000 25.84 16.04 45.94 6.01
137 138 4.511443 GAGCTGCATGCACGCGTC 62.511 66.667 25.84 20.96 45.94 5.19
139 140 4.806481 GCTGCATGCACGCGTCAG 62.806 66.667 18.46 14.99 42.31 3.51
140 141 3.417224 CTGCATGCACGCGTCAGT 61.417 61.111 18.46 0.00 33.35 3.41
141 142 2.958204 CTGCATGCACGCGTCAGTT 61.958 57.895 18.46 0.00 33.35 3.16
142 143 2.252260 GCATGCACGCGTCAGTTT 59.748 55.556 9.86 0.00 0.00 2.66
143 144 1.370414 GCATGCACGCGTCAGTTTT 60.370 52.632 9.86 0.00 0.00 2.43
144 145 0.934436 GCATGCACGCGTCAGTTTTT 60.934 50.000 9.86 0.00 0.00 1.94
166 167 7.532682 TTTTTCTTGATTAAAACACACAGGC 57.467 32.000 0.00 0.00 0.00 4.85
167 168 4.481930 TCTTGATTAAAACACACAGGCG 57.518 40.909 0.00 0.00 0.00 5.52
168 169 3.252215 TCTTGATTAAAACACACAGGCGG 59.748 43.478 0.00 0.00 0.00 6.13
169 170 1.268352 TGATTAAAACACACAGGCGGC 59.732 47.619 0.00 0.00 0.00 6.53
170 171 1.268352 GATTAAAACACACAGGCGGCA 59.732 47.619 13.08 0.00 0.00 5.69
171 172 0.665835 TTAAAACACACAGGCGGCAG 59.334 50.000 13.08 5.57 0.00 4.85
172 173 0.464735 TAAAACACACAGGCGGCAGT 60.465 50.000 13.08 6.43 0.00 4.40
173 174 1.319614 AAAACACACAGGCGGCAGTT 61.320 50.000 13.08 4.88 0.00 3.16
174 175 0.464735 AAACACACAGGCGGCAGTTA 60.465 50.000 13.08 0.00 0.00 2.24
175 176 1.164041 AACACACAGGCGGCAGTTAC 61.164 55.000 13.08 0.00 0.00 2.50
176 177 1.301716 CACACAGGCGGCAGTTACT 60.302 57.895 13.08 0.00 0.00 2.24
177 178 1.301716 ACACAGGCGGCAGTTACTG 60.302 57.895 13.08 8.18 37.01 2.74
189 190 3.127081 CAGTTACTGCATGCATGTGTC 57.873 47.619 26.79 16.29 0.00 3.67
190 191 2.485038 CAGTTACTGCATGCATGTGTCA 59.515 45.455 26.79 15.64 0.00 3.58
191 192 3.128068 CAGTTACTGCATGCATGTGTCAT 59.872 43.478 26.79 11.50 0.00 3.06
192 193 3.760151 AGTTACTGCATGCATGTGTCATT 59.240 39.130 26.79 13.36 0.00 2.57
193 194 4.219070 AGTTACTGCATGCATGTGTCATTT 59.781 37.500 26.79 9.64 0.00 2.32
194 195 5.415389 AGTTACTGCATGCATGTGTCATTTA 59.585 36.000 26.79 8.91 0.00 1.40
195 196 4.100707 ACTGCATGCATGTGTCATTTAC 57.899 40.909 26.79 8.24 0.00 2.01
196 197 3.760151 ACTGCATGCATGTGTCATTTACT 59.240 39.130 26.79 0.94 0.00 2.24
197 198 4.943093 ACTGCATGCATGTGTCATTTACTA 59.057 37.500 26.79 0.00 0.00 1.82
198 199 5.163723 ACTGCATGCATGTGTCATTTACTAC 60.164 40.000 26.79 6.83 0.00 2.73
199 200 4.699257 TGCATGCATGTGTCATTTACTACA 59.301 37.500 26.79 9.33 0.00 2.74
200 201 5.357596 TGCATGCATGTGTCATTTACTACAT 59.642 36.000 26.79 0.00 33.11 2.29
201 202 6.541641 TGCATGCATGTGTCATTTACTACATA 59.458 34.615 26.79 0.00 32.26 2.29
202 203 7.229106 TGCATGCATGTGTCATTTACTACATAT 59.771 33.333 26.79 0.00 32.26 1.78
203 204 7.536281 GCATGCATGTGTCATTTACTACATATG 59.464 37.037 26.79 0.00 43.83 1.78
204 205 7.495135 TGCATGTGTCATTTACTACATATGG 57.505 36.000 7.80 0.00 42.28 2.74
205 206 7.053498 TGCATGTGTCATTTACTACATATGGT 58.947 34.615 7.80 0.00 42.28 3.55
206 207 8.207545 TGCATGTGTCATTTACTACATATGGTA 58.792 33.333 7.80 0.00 42.28 3.25
207 208 8.495949 GCATGTGTCATTTACTACATATGGTAC 58.504 37.037 7.80 0.00 42.28 3.34
208 209 9.541143 CATGTGTCATTTACTACATATGGTACA 57.459 33.333 7.80 0.00 39.89 2.90
219 220 4.294523 TGGTACATGCAACGGCTC 57.705 55.556 0.00 0.00 41.91 4.70
220 221 1.676968 TGGTACATGCAACGGCTCT 59.323 52.632 0.00 0.00 41.91 4.09
221 222 0.391130 TGGTACATGCAACGGCTCTC 60.391 55.000 0.00 0.00 41.91 3.20
222 223 1.421410 GGTACATGCAACGGCTCTCG 61.421 60.000 0.00 0.00 45.88 4.04
233 234 1.828832 CGGCTCTCGTTGTGTAGATC 58.171 55.000 0.00 0.00 0.00 2.75
234 235 1.828832 GGCTCTCGTTGTGTAGATCG 58.171 55.000 0.00 0.00 0.00 3.69
235 236 1.534175 GGCTCTCGTTGTGTAGATCGG 60.534 57.143 0.00 0.00 0.00 4.18
236 237 1.400846 GCTCTCGTTGTGTAGATCGGA 59.599 52.381 0.00 0.00 0.00 4.55
237 238 2.791849 GCTCTCGTTGTGTAGATCGGAC 60.792 54.545 0.00 0.00 0.00 4.79
238 239 2.418976 CTCTCGTTGTGTAGATCGGACA 59.581 50.000 0.00 0.00 0.00 4.02
239 240 2.418976 TCTCGTTGTGTAGATCGGACAG 59.581 50.000 3.97 0.00 0.00 3.51
240 241 2.418976 CTCGTTGTGTAGATCGGACAGA 59.581 50.000 3.97 0.76 0.00 3.41
241 242 3.014623 TCGTTGTGTAGATCGGACAGAT 58.985 45.455 3.97 0.00 43.51 2.90
242 243 4.193865 TCGTTGTGTAGATCGGACAGATA 58.806 43.478 3.97 0.00 40.26 1.98
243 244 4.820173 TCGTTGTGTAGATCGGACAGATAT 59.180 41.667 3.97 0.00 40.26 1.63
244 245 5.298527 TCGTTGTGTAGATCGGACAGATATT 59.701 40.000 3.97 0.00 40.26 1.28
245 246 5.399596 CGTTGTGTAGATCGGACAGATATTG 59.600 44.000 3.97 0.00 40.26 1.90
246 247 6.273825 GTTGTGTAGATCGGACAGATATTGT 58.726 40.000 3.97 0.00 44.55 2.71
247 248 6.465439 TGTGTAGATCGGACAGATATTGTT 57.535 37.500 3.97 0.00 41.05 2.83
248 249 6.273071 TGTGTAGATCGGACAGATATTGTTG 58.727 40.000 3.97 0.00 41.05 3.33
249 250 6.096282 TGTGTAGATCGGACAGATATTGTTGA 59.904 38.462 3.97 0.00 41.05 3.18
250 251 7.148641 GTGTAGATCGGACAGATATTGTTGAT 58.851 38.462 3.97 6.50 41.05 2.57
251 252 7.653713 GTGTAGATCGGACAGATATTGTTGATT 59.346 37.037 3.97 0.00 41.05 2.57
252 253 7.653311 TGTAGATCGGACAGATATTGTTGATTG 59.347 37.037 0.00 0.00 41.05 2.67
253 254 6.820335 AGATCGGACAGATATTGTTGATTGA 58.180 36.000 0.00 0.00 41.05 2.57
254 255 7.448420 AGATCGGACAGATATTGTTGATTGAT 58.552 34.615 0.00 0.00 41.05 2.57
255 256 7.601886 AGATCGGACAGATATTGTTGATTGATC 59.398 37.037 0.00 0.00 41.05 2.92
256 257 6.820335 TCGGACAGATATTGTTGATTGATCT 58.180 36.000 0.00 0.00 41.05 2.75
257 258 7.951591 TCGGACAGATATTGTTGATTGATCTA 58.048 34.615 0.00 0.00 41.05 1.98
258 259 7.867909 TCGGACAGATATTGTTGATTGATCTAC 59.132 37.037 0.00 0.00 41.05 2.59
259 260 7.869937 CGGACAGATATTGTTGATTGATCTACT 59.130 37.037 7.01 0.00 41.05 2.57
271 272 8.940952 GTTGATTGATCTACTATATTCAAGGGC 58.059 37.037 0.00 0.00 32.13 5.19
272 273 8.441311 TGATTGATCTACTATATTCAAGGGCT 57.559 34.615 0.00 0.00 32.13 5.19
273 274 9.547279 TGATTGATCTACTATATTCAAGGGCTA 57.453 33.333 0.00 0.00 32.13 3.93
288 289 7.969690 TCAAGGGCTAAATTAATTTGGATGA 57.030 32.000 23.83 17.76 30.82 2.92
289 290 8.551682 TCAAGGGCTAAATTAATTTGGATGAT 57.448 30.769 23.83 7.57 30.82 2.45
290 291 8.423349 TCAAGGGCTAAATTAATTTGGATGATG 58.577 33.333 23.83 16.52 30.82 3.07
291 292 7.919385 AGGGCTAAATTAATTTGGATGATGT 57.081 32.000 23.83 0.00 30.82 3.06
292 293 7.729116 AGGGCTAAATTAATTTGGATGATGTG 58.271 34.615 23.83 5.77 30.82 3.21
293 294 6.930722 GGGCTAAATTAATTTGGATGATGTGG 59.069 38.462 23.83 0.12 30.82 4.17
294 295 6.424812 GGCTAAATTAATTTGGATGATGTGGC 59.575 38.462 23.83 8.92 30.82 5.01
295 296 7.212274 GCTAAATTAATTTGGATGATGTGGCT 58.788 34.615 23.83 0.00 30.82 4.75
296 297 7.383300 GCTAAATTAATTTGGATGATGTGGCTC 59.617 37.037 23.83 2.48 30.82 4.70
297 298 6.795144 AATTAATTTGGATGATGTGGCTCA 57.205 33.333 0.00 0.00 0.00 4.26
298 299 6.795144 ATTAATTTGGATGATGTGGCTCAA 57.205 33.333 0.00 0.00 0.00 3.02
299 300 4.730949 AATTTGGATGATGTGGCTCAAG 57.269 40.909 0.00 0.00 0.00 3.02
300 301 2.133281 TTGGATGATGTGGCTCAAGG 57.867 50.000 0.00 0.00 0.00 3.61
301 302 1.288188 TGGATGATGTGGCTCAAGGA 58.712 50.000 0.00 0.00 0.00 3.36
302 303 1.211212 TGGATGATGTGGCTCAAGGAG 59.789 52.381 0.00 0.00 0.00 3.69
303 304 1.487976 GGATGATGTGGCTCAAGGAGA 59.512 52.381 0.00 0.00 0.00 3.71
304 305 2.092753 GGATGATGTGGCTCAAGGAGAA 60.093 50.000 0.00 0.00 0.00 2.87
305 306 2.775911 TGATGTGGCTCAAGGAGAAG 57.224 50.000 0.00 0.00 0.00 2.85
306 307 1.339438 TGATGTGGCTCAAGGAGAAGC 60.339 52.381 0.00 0.00 0.00 3.86
307 308 0.392193 ATGTGGCTCAAGGAGAAGCG 60.392 55.000 0.00 0.00 0.00 4.68
308 309 1.293498 GTGGCTCAAGGAGAAGCGA 59.707 57.895 0.00 0.00 0.00 4.93
309 310 0.739112 GTGGCTCAAGGAGAAGCGAG 60.739 60.000 0.00 0.00 0.00 5.03
310 311 0.900182 TGGCTCAAGGAGAAGCGAGA 60.900 55.000 0.00 0.00 0.00 4.04
311 312 0.247736 GGCTCAAGGAGAAGCGAGAA 59.752 55.000 0.00 0.00 0.00 2.87
312 313 1.338200 GGCTCAAGGAGAAGCGAGAAA 60.338 52.381 0.00 0.00 0.00 2.52
313 314 1.999024 GCTCAAGGAGAAGCGAGAAAG 59.001 52.381 0.00 0.00 0.00 2.62
314 315 2.611722 GCTCAAGGAGAAGCGAGAAAGT 60.612 50.000 0.00 0.00 0.00 2.66
315 316 3.658709 CTCAAGGAGAAGCGAGAAAGTT 58.341 45.455 0.00 0.00 0.00 2.66
316 317 3.654414 TCAAGGAGAAGCGAGAAAGTTC 58.346 45.455 0.00 0.00 0.00 3.01
317 318 3.322254 TCAAGGAGAAGCGAGAAAGTTCT 59.678 43.478 0.00 0.00 41.00 3.01
318 319 4.061596 CAAGGAGAAGCGAGAAAGTTCTT 58.938 43.478 0.00 0.00 37.73 2.52
319 320 5.010719 TCAAGGAGAAGCGAGAAAGTTCTTA 59.989 40.000 0.00 0.00 37.73 2.10
320 321 5.066968 AGGAGAAGCGAGAAAGTTCTTAG 57.933 43.478 0.00 0.00 37.73 2.18
321 322 4.525100 AGGAGAAGCGAGAAAGTTCTTAGT 59.475 41.667 0.00 0.00 37.73 2.24
322 323 5.711036 AGGAGAAGCGAGAAAGTTCTTAGTA 59.289 40.000 0.00 0.00 37.73 1.82
323 324 6.031471 GGAGAAGCGAGAAAGTTCTTAGTAG 58.969 44.000 0.00 0.00 37.73 2.57
324 325 6.349528 GGAGAAGCGAGAAAGTTCTTAGTAGT 60.350 42.308 0.00 0.00 37.73 2.73
325 326 6.383415 AGAAGCGAGAAAGTTCTTAGTAGTG 58.617 40.000 0.00 0.00 37.73 2.74
326 327 5.061920 AGCGAGAAAGTTCTTAGTAGTGG 57.938 43.478 0.00 0.00 37.73 4.00
327 328 4.082136 AGCGAGAAAGTTCTTAGTAGTGGG 60.082 45.833 0.00 0.00 37.73 4.61
328 329 4.745649 CGAGAAAGTTCTTAGTAGTGGGG 58.254 47.826 0.00 0.00 37.73 4.96
329 330 4.381718 CGAGAAAGTTCTTAGTAGTGGGGG 60.382 50.000 0.00 0.00 37.73 5.40
330 331 3.263681 AGAAAGTTCTTAGTAGTGGGGGC 59.736 47.826 0.00 0.00 32.55 5.80
331 332 2.644060 AGTTCTTAGTAGTGGGGGCT 57.356 50.000 0.00 0.00 0.00 5.19
332 333 3.771071 AGTTCTTAGTAGTGGGGGCTA 57.229 47.619 0.00 0.00 0.00 3.93
333 334 3.644335 AGTTCTTAGTAGTGGGGGCTAG 58.356 50.000 0.00 0.00 0.00 3.42
334 335 2.083628 TCTTAGTAGTGGGGGCTAGC 57.916 55.000 6.04 6.04 0.00 3.42
335 336 1.574339 TCTTAGTAGTGGGGGCTAGCT 59.426 52.381 15.72 0.00 0.00 3.32
336 337 2.787625 TCTTAGTAGTGGGGGCTAGCTA 59.212 50.000 15.72 0.00 0.00 3.32
337 338 3.401683 TCTTAGTAGTGGGGGCTAGCTAT 59.598 47.826 15.72 0.00 0.00 2.97
338 339 2.797285 AGTAGTGGGGGCTAGCTATT 57.203 50.000 15.72 0.00 0.00 1.73
339 340 3.061909 AGTAGTGGGGGCTAGCTATTT 57.938 47.619 15.72 0.00 0.00 1.40
340 341 4.209154 AGTAGTGGGGGCTAGCTATTTA 57.791 45.455 15.72 0.00 0.00 1.40
341 342 4.161102 AGTAGTGGGGGCTAGCTATTTAG 58.839 47.826 15.72 0.00 0.00 1.85
342 343 3.346146 AGTGGGGGCTAGCTATTTAGA 57.654 47.619 15.72 0.00 0.00 2.10
343 344 3.875571 AGTGGGGGCTAGCTATTTAGAT 58.124 45.455 15.72 0.00 0.00 1.98
344 345 5.024803 AGTGGGGGCTAGCTATTTAGATA 57.975 43.478 15.72 0.00 0.00 1.98
345 346 5.604752 AGTGGGGGCTAGCTATTTAGATAT 58.395 41.667 15.72 0.00 0.00 1.63
346 347 6.753134 AGTGGGGGCTAGCTATTTAGATATA 58.247 40.000 15.72 0.00 0.00 0.86
347 348 7.196901 AGTGGGGGCTAGCTATTTAGATATAA 58.803 38.462 15.72 0.00 0.00 0.98
348 349 7.851968 AGTGGGGGCTAGCTATTTAGATATAAT 59.148 37.037 15.72 0.00 0.00 1.28
349 350 9.155785 GTGGGGGCTAGCTATTTAGATATAATA 57.844 37.037 15.72 0.00 0.00 0.98
350 351 9.381038 TGGGGGCTAGCTATTTAGATATAATAG 57.619 37.037 15.72 0.00 38.19 1.73
351 352 9.603189 GGGGGCTAGCTATTTAGATATAATAGA 57.397 37.037 15.72 0.00 37.64 1.98
395 396 9.673454 AAGAAAAACTATTTTTGGCTAGTAACG 57.327 29.630 4.09 0.00 42.51 3.18
396 397 8.843262 AGAAAAACTATTTTTGGCTAGTAACGT 58.157 29.630 4.09 0.00 42.51 3.99
397 398 8.791355 AAAAACTATTTTTGGCTAGTAACGTG 57.209 30.769 0.00 0.00 41.04 4.49
398 399 5.541098 ACTATTTTTGGCTAGTAACGTGC 57.459 39.130 0.00 0.00 0.00 5.34
399 400 3.842732 ATTTTTGGCTAGTAACGTGCC 57.157 42.857 6.89 6.89 46.26 5.01
407 408 4.844267 GGCTAGTAACGTGCCAATAAATG 58.156 43.478 8.85 0.00 45.46 2.32
408 409 4.334481 GGCTAGTAACGTGCCAATAAATGT 59.666 41.667 8.85 0.00 45.46 2.71
409 410 5.524646 GGCTAGTAACGTGCCAATAAATGTA 59.475 40.000 8.85 0.00 45.46 2.29
410 411 6.292703 GGCTAGTAACGTGCCAATAAATGTAG 60.293 42.308 8.85 0.00 45.46 2.74
411 412 6.257193 GCTAGTAACGTGCCAATAAATGTAGT 59.743 38.462 0.00 0.00 0.00 2.73
412 413 6.417191 AGTAACGTGCCAATAAATGTAGTG 57.583 37.500 0.00 0.00 0.00 2.74
413 414 4.695217 AACGTGCCAATAAATGTAGTGG 57.305 40.909 4.94 4.94 46.28 4.00
436 437 1.552578 AAAACCCGAAATACCCCAGC 58.447 50.000 0.00 0.00 0.00 4.85
437 438 0.406361 AAACCCGAAATACCCCAGCA 59.594 50.000 0.00 0.00 0.00 4.41
438 439 0.406361 AACCCGAAATACCCCAGCAA 59.594 50.000 0.00 0.00 0.00 3.91
439 440 0.323087 ACCCGAAATACCCCAGCAAC 60.323 55.000 0.00 0.00 0.00 4.17
440 441 0.322997 CCCGAAATACCCCAGCAACA 60.323 55.000 0.00 0.00 0.00 3.33
441 442 1.540267 CCGAAATACCCCAGCAACAA 58.460 50.000 0.00 0.00 0.00 2.83
442 443 1.889829 CCGAAATACCCCAGCAACAAA 59.110 47.619 0.00 0.00 0.00 2.83
443 444 2.297597 CCGAAATACCCCAGCAACAAAA 59.702 45.455 0.00 0.00 0.00 2.44
444 445 3.313690 CGAAATACCCCAGCAACAAAAC 58.686 45.455 0.00 0.00 0.00 2.43
445 446 3.659786 GAAATACCCCAGCAACAAAACC 58.340 45.455 0.00 0.00 0.00 3.27
446 447 1.253100 ATACCCCAGCAACAAAACCG 58.747 50.000 0.00 0.00 0.00 4.44
447 448 0.183014 TACCCCAGCAACAAAACCGA 59.817 50.000 0.00 0.00 0.00 4.69
448 449 1.106944 ACCCCAGCAACAAAACCGAG 61.107 55.000 0.00 0.00 0.00 4.63
449 450 0.821711 CCCCAGCAACAAAACCGAGA 60.822 55.000 0.00 0.00 0.00 4.04
450 451 0.593128 CCCAGCAACAAAACCGAGAG 59.407 55.000 0.00 0.00 0.00 3.20
451 452 1.308998 CCAGCAACAAAACCGAGAGT 58.691 50.000 0.00 0.00 0.00 3.24
452 453 1.264288 CCAGCAACAAAACCGAGAGTC 59.736 52.381 0.00 0.00 0.00 3.36
453 454 1.070577 CAGCAACAAAACCGAGAGTCG 60.071 52.381 0.00 0.00 40.07 4.18
454 455 0.384353 GCAACAAAACCGAGAGTCGC 60.384 55.000 0.00 0.00 38.82 5.19
455 456 0.234884 CAACAAAACCGAGAGTCGCC 59.765 55.000 0.00 0.00 38.82 5.54
456 457 0.106149 AACAAAACCGAGAGTCGCCT 59.894 50.000 0.00 0.00 38.82 5.52
457 458 0.106149 ACAAAACCGAGAGTCGCCTT 59.894 50.000 0.00 0.00 38.82 4.35
458 459 1.226746 CAAAACCGAGAGTCGCCTTT 58.773 50.000 0.00 0.00 38.82 3.11
459 460 1.602377 CAAAACCGAGAGTCGCCTTTT 59.398 47.619 0.00 0.00 38.82 2.27
460 461 1.509703 AAACCGAGAGTCGCCTTTTC 58.490 50.000 0.00 0.00 38.82 2.29
461 462 0.680061 AACCGAGAGTCGCCTTTTCT 59.320 50.000 0.00 0.00 38.82 2.52
462 463 0.680061 ACCGAGAGTCGCCTTTTCTT 59.320 50.000 0.00 0.00 38.82 2.52
463 464 1.070289 ACCGAGAGTCGCCTTTTCTTT 59.930 47.619 0.00 0.00 38.82 2.52
464 465 1.727335 CCGAGAGTCGCCTTTTCTTTC 59.273 52.381 0.00 0.00 38.82 2.62
465 466 1.727335 CGAGAGTCGCCTTTTCTTTCC 59.273 52.381 0.00 0.00 31.14 3.13
466 467 2.610727 CGAGAGTCGCCTTTTCTTTCCT 60.611 50.000 0.00 0.00 31.14 3.36
467 468 3.403968 GAGAGTCGCCTTTTCTTTCCTT 58.596 45.455 0.00 0.00 0.00 3.36
468 469 3.403968 AGAGTCGCCTTTTCTTTCCTTC 58.596 45.455 0.00 0.00 0.00 3.46
469 470 3.071747 AGAGTCGCCTTTTCTTTCCTTCT 59.928 43.478 0.00 0.00 0.00 2.85
470 471 3.403968 AGTCGCCTTTTCTTTCCTTCTC 58.596 45.455 0.00 0.00 0.00 2.87
471 472 2.484651 GTCGCCTTTTCTTTCCTTCTCC 59.515 50.000 0.00 0.00 0.00 3.71
472 473 2.105821 TCGCCTTTTCTTTCCTTCTCCA 59.894 45.455 0.00 0.00 0.00 3.86
473 474 3.084786 CGCCTTTTCTTTCCTTCTCCAT 58.915 45.455 0.00 0.00 0.00 3.41
474 475 3.507622 CGCCTTTTCTTTCCTTCTCCATT 59.492 43.478 0.00 0.00 0.00 3.16
475 476 4.021981 CGCCTTTTCTTTCCTTCTCCATTT 60.022 41.667 0.00 0.00 0.00 2.32
476 477 5.509670 CGCCTTTTCTTTCCTTCTCCATTTT 60.510 40.000 0.00 0.00 0.00 1.82
477 478 6.291377 GCCTTTTCTTTCCTTCTCCATTTTT 58.709 36.000 0.00 0.00 0.00 1.94
595 596 3.372822 ACGTCGCAAAAGAAGAAGACAAA 59.627 39.130 0.00 0.00 0.00 2.83
607 608 2.070028 GAAGACAAACGAAGCTCCTCC 58.930 52.381 0.00 0.00 0.00 4.30
674 675 3.566742 GGGTCTAAAACAAGGCTTTTCGA 59.433 43.478 0.00 0.00 0.00 3.71
687 688 2.672195 GCTTTTCGAAGAAATGGCCCAG 60.672 50.000 0.00 0.00 45.90 4.45
715 716 2.203280 CCCAACGCACCTCCACAA 60.203 61.111 0.00 0.00 0.00 3.33
761 762 1.646540 CGAGCGACAACAAAAGCCA 59.353 52.632 0.00 0.00 0.00 4.75
783 784 4.899239 CCGTCGGCCTCCAGCATC 62.899 72.222 0.00 0.00 46.50 3.91
784 785 4.899239 CGTCGGCCTCCAGCATCC 62.899 72.222 0.00 0.00 46.50 3.51
883 884 2.741055 GCTGAGCCCCTCTTCTCCC 61.741 68.421 0.00 0.00 0.00 4.30
949 950 0.186386 TCCTCGAATCTCCTCTCCCC 59.814 60.000 0.00 0.00 0.00 4.81
953 954 0.824759 CGAATCTCCTCTCCCCGTTT 59.175 55.000 0.00 0.00 0.00 3.60
1058 1060 2.202690 CCGCGTAATCCGACTGCA 60.203 61.111 4.92 0.00 39.56 4.41
1077 1079 1.196808 CAAGCGCCGTGTATTTGTCTT 59.803 47.619 2.29 0.00 0.00 3.01
1079 1081 0.179200 GCGCCGTGTATTTGTCTTGG 60.179 55.000 0.00 0.00 0.00 3.61
1080 1082 1.153353 CGCCGTGTATTTGTCTTGGT 58.847 50.000 0.00 0.00 0.00 3.67
1081 1083 1.533731 CGCCGTGTATTTGTCTTGGTT 59.466 47.619 0.00 0.00 0.00 3.67
1083 1085 2.920647 GCCGTGTATTTGTCTTGGTTGC 60.921 50.000 0.00 0.00 0.00 4.17
1087 1089 2.811431 TGTATTTGTCTTGGTTGCCGAG 59.189 45.455 0.00 0.00 36.39 4.63
1088 1090 1.981256 ATTTGTCTTGGTTGCCGAGT 58.019 45.000 2.66 0.00 36.45 4.18
1157 1159 3.146847 GTGCTACTTGTTGCCTTACCTT 58.853 45.455 4.92 0.00 0.00 3.50
1170 1172 2.369394 CTTACCTTGGAGGAATGTGCC 58.631 52.381 0.07 0.00 37.67 5.01
1200 1202 5.188555 TGTGGAGAAGCTGTCTTTGAGATAT 59.811 40.000 0.00 0.00 36.41 1.63
1245 1247 4.095483 GCATGTTCCTGTTTGATCGATTCT 59.905 41.667 0.00 0.00 0.00 2.40
1271 1273 0.459489 CTGCCTCACTGCTCTAGGTC 59.541 60.000 0.00 0.00 32.67 3.85
1365 1367 9.267096 CTAATTTAGAGAAGAAATTGCGAACAC 57.733 33.333 0.00 0.00 37.16 3.32
1440 1442 1.192428 GTACCCGGTCAGGATCAACT 58.808 55.000 0.00 0.00 45.00 3.16
1454 1456 4.953667 GGATCAACTGATGCTGATGTAGA 58.046 43.478 4.13 0.00 39.42 2.59
1473 1475 5.639506 TGTAGAGATTACTGTGCTTGCTTTC 59.360 40.000 0.00 0.00 0.00 2.62
1570 1572 6.947464 AGCTGTAGTGTAACCAATATTGTCT 58.053 36.000 14.25 3.56 37.80 3.41
1581 1583 7.462571 AACCAATATTGTCTTTGTAGGAACC 57.537 36.000 14.25 0.00 0.00 3.62
1706 1715 5.660629 CATGTGTGCATGTTTTGTCATTT 57.339 34.783 0.00 0.00 45.48 2.32
1717 1726 7.148755 GCATGTTTTGTCATTTAGTGGTCATTC 60.149 37.037 0.00 0.00 0.00 2.67
1739 1748 3.302555 GGTCATTATGTGATGCATTGCG 58.697 45.455 0.00 0.00 39.48 4.85
1741 1750 2.950975 TCATTATGTGATGCATTGCGGT 59.049 40.909 0.00 0.00 38.94 5.68
1742 1751 3.003585 TCATTATGTGATGCATTGCGGTC 59.996 43.478 0.00 5.60 38.94 4.79
1761 1772 4.504461 CGGTCTGAGCAGTATAACAATGTC 59.496 45.833 7.70 0.00 0.00 3.06
1821 1832 8.383175 TGTATTGAAAACTAATCCTGAGAAGGT 58.617 33.333 0.00 0.00 0.00 3.50
1847 1858 4.032960 TGGTCTTTATGTGATGCCTTGT 57.967 40.909 0.00 0.00 0.00 3.16
1851 1862 5.880332 GGTCTTTATGTGATGCCTTGTTCTA 59.120 40.000 0.00 0.00 0.00 2.10
1854 1865 2.787473 TGTGATGCCTTGTTCTAGGG 57.213 50.000 2.92 0.00 35.74 3.53
1855 1866 1.985159 TGTGATGCCTTGTTCTAGGGT 59.015 47.619 2.92 0.00 35.74 4.34
1862 1873 3.393278 TGCCTTGTTCTAGGGTAACTGTT 59.607 43.478 0.00 0.00 35.74 3.16
1866 1878 6.093633 GCCTTGTTCTAGGGTAACTGTTATTG 59.906 42.308 3.23 0.00 35.74 1.90
1964 1976 2.085343 ATGCCCCAGTTGAGGTTGCT 62.085 55.000 0.00 0.00 0.00 3.91
2219 2231 0.035317 TCACTGTGCCTAGTGCCAAG 59.965 55.000 11.43 2.13 45.94 3.61
2299 2311 5.602145 ACATTTCTCCCAAATTTCACCTCAA 59.398 36.000 0.00 0.00 0.00 3.02
2336 2348 2.720578 CACGTGTCATGTTCATTTGCAC 59.279 45.455 7.58 0.00 0.00 4.57
2466 2547 6.049149 GCTTATGTCTGGTCATTTACTAGCA 58.951 40.000 0.00 0.00 36.66 3.49
2475 2556 6.303839 TGGTCATTTACTAGCAGTTTTCCTT 58.696 36.000 0.00 0.00 0.00 3.36
2533 2614 5.118990 TGCAGTATGATGGTTCTTCTTAGC 58.881 41.667 0.00 0.00 39.69 3.09
2541 2622 4.568152 TGGTTCTTCTTAGCTTGCAAAC 57.432 40.909 0.00 0.00 0.00 2.93
2542 2623 3.317993 TGGTTCTTCTTAGCTTGCAAACC 59.682 43.478 0.00 1.38 36.34 3.27
2567 2648 3.307691 CCTTGTATGGAAGCTGGAACTGA 60.308 47.826 0.00 0.00 0.00 3.41
2590 2671 5.840243 TTGCTGACAAATTCCATATCCTG 57.160 39.130 0.00 0.00 31.21 3.86
2662 2743 1.672356 GGGCTGCTCATGTGTCGTT 60.672 57.895 0.00 0.00 0.00 3.85
2723 2804 7.554476 AGAAGAATCCTGTTCTATTTTAGTGCC 59.446 37.037 0.00 0.00 33.55 5.01
2730 2814 7.121168 TCCTGTTCTATTTTAGTGCCAAGAATG 59.879 37.037 0.00 0.00 0.00 2.67
2885 2969 4.021894 AGGATGCTAGTAGCTTCGTTATGG 60.022 45.833 24.11 0.00 43.80 2.74
2889 2973 3.245519 GCTAGTAGCTTCGTTATGGTTGC 59.754 47.826 15.16 0.00 38.45 4.17
3010 3094 5.359292 TGTCAGAGATACAGATCTTCCAGTG 59.641 44.000 0.00 0.00 42.80 3.66
3033 3118 5.181811 TGTCATTTTGTTGGTGCTATCTCTG 59.818 40.000 0.00 0.00 0.00 3.35
3034 3119 5.182001 GTCATTTTGTTGGTGCTATCTCTGT 59.818 40.000 0.00 0.00 0.00 3.41
3103 3188 7.161404 TGTGTCTACTGCTAAGTTTGATGAAT 58.839 34.615 0.00 0.00 37.88 2.57
3117 3202 8.408043 AGTTTGATGAATGAAATTACTCCACA 57.592 30.769 0.00 0.00 36.07 4.17
3120 3205 5.937540 TGATGAATGAAATTACTCCACACGT 59.062 36.000 0.00 0.00 36.07 4.49
3142 3227 1.418373 TGTTCACTGAACGATCTGCG 58.582 50.000 15.60 0.00 44.55 5.18
3166 3251 7.429340 GCGTAACCACTCTTTGATGAATTATTG 59.571 37.037 0.00 0.00 0.00 1.90
3170 3255 6.435277 ACCACTCTTTGATGAATTATTGCACT 59.565 34.615 0.00 0.00 0.00 4.40
3180 3265 6.000891 TGAATTATTGCACTGTCTGTTGTC 57.999 37.500 0.00 0.00 0.00 3.18
3182 3267 2.346766 ATTGCACTGTCTGTTGTCCA 57.653 45.000 0.00 0.00 0.00 4.02
3200 3285 4.227300 TGTCCAGGGTTGATAGTAAGCAAT 59.773 41.667 0.00 0.00 32.78 3.56
3206 3291 3.066760 GGTTGATAGTAAGCAATGCCCAC 59.933 47.826 0.00 0.00 32.78 4.61
3249 3334 9.807921 GATAAATTACCCTGGGAAGATGAATTA 57.192 33.333 22.23 7.71 0.00 1.40
3251 3336 3.584733 ACCCTGGGAAGATGAATTAGC 57.415 47.619 22.23 0.00 0.00 3.09
3252 3337 2.158755 ACCCTGGGAAGATGAATTAGCG 60.159 50.000 22.23 0.00 0.00 4.26
3328 3425 2.889045 ACTCACATGAAGCAGCAAACAT 59.111 40.909 0.00 0.00 0.00 2.71
3343 3440 5.003804 AGCAAACATGAATACTCTCCGTTT 58.996 37.500 0.00 0.00 0.00 3.60
3349 3446 5.046591 ACATGAATACTCTCCGTTTTCCTGA 60.047 40.000 0.00 0.00 34.92 3.86
3384 3481 2.673833 AGAAAGCGTAAGGAAGTGTCG 58.326 47.619 0.00 0.00 38.28 4.35
3400 3497 8.370940 AGGAAGTGTCGAATCAATATGATGTAT 58.629 33.333 0.00 0.00 37.15 2.29
3426 3564 4.593956 CAAAGCCAGTAAGAAGGGAATCT 58.406 43.478 0.00 0.00 0.00 2.40
3442 3580 7.182017 AGGGAATCTAAAGTAGATAGGGACT 57.818 40.000 0.00 0.00 44.44 3.85
3456 3594 2.898662 AGGGACTAAGAAGGGAAACGA 58.101 47.619 0.00 0.00 36.02 3.85
3457 3595 3.245441 AGGGACTAAGAAGGGAAACGAA 58.755 45.455 0.00 0.00 36.02 3.85
3458 3596 3.649502 AGGGACTAAGAAGGGAAACGAAA 59.350 43.478 0.00 0.00 36.02 3.46
3459 3597 4.001652 GGGACTAAGAAGGGAAACGAAAG 58.998 47.826 0.00 0.00 0.00 2.62
3460 3598 6.693725 AGGGACTAAGAAGGGAAACGAAAGT 61.694 44.000 0.00 0.00 43.93 2.66
3461 3599 7.430102 AGGGACTAAGAAGGGAAACGAAAGTA 61.430 42.308 0.00 0.00 40.83 2.24
3462 3600 9.147554 AGGGACTAAGAAGGGAAACGAAAGTAG 62.148 44.444 0.00 0.00 40.83 2.57
3532 3670 4.495422 ACCTTATAGCATAGCGAATTCCG 58.505 43.478 0.00 0.00 42.21 4.30
3543 3681 1.333258 GCGAATTCCGTGATTGCTAGC 60.333 52.381 8.10 8.10 41.15 3.42
3571 3709 4.070716 CCATAGGGATTGATGAAGAGTGC 58.929 47.826 0.00 0.00 35.59 4.40
3584 3722 2.988010 AGAGTGCGCTGATAATGGAA 57.012 45.000 3.44 0.00 0.00 3.53
3585 3723 3.482156 AGAGTGCGCTGATAATGGAAT 57.518 42.857 3.44 0.00 0.00 3.01
3586 3724 3.813443 AGAGTGCGCTGATAATGGAATT 58.187 40.909 3.44 0.00 41.28 2.17
3587 3725 4.202441 AGAGTGCGCTGATAATGGAATTT 58.798 39.130 3.44 0.00 37.87 1.82
3588 3726 4.641989 AGAGTGCGCTGATAATGGAATTTT 59.358 37.500 3.44 0.00 37.87 1.82
3589 3727 5.126061 AGAGTGCGCTGATAATGGAATTTTT 59.874 36.000 3.44 0.00 37.87 1.94
3590 3728 5.343249 AGTGCGCTGATAATGGAATTTTTC 58.657 37.500 9.73 0.00 37.87 2.29
3591 3729 5.126061 AGTGCGCTGATAATGGAATTTTTCT 59.874 36.000 9.73 0.00 37.87 2.52
3592 3730 5.807011 GTGCGCTGATAATGGAATTTTTCTT 59.193 36.000 9.73 0.00 37.87 2.52
3593 3731 6.020360 GTGCGCTGATAATGGAATTTTTCTTC 60.020 38.462 9.73 0.00 37.87 2.87
3594 3732 5.172053 GCGCTGATAATGGAATTTTTCTTCG 59.828 40.000 0.00 0.00 37.87 3.79
3595 3733 6.486248 CGCTGATAATGGAATTTTTCTTCGA 58.514 36.000 0.00 0.00 37.87 3.71
3596 3734 7.134815 CGCTGATAATGGAATTTTTCTTCGAT 58.865 34.615 0.00 0.00 37.87 3.59
3597 3735 8.282592 CGCTGATAATGGAATTTTTCTTCGATA 58.717 33.333 0.00 0.00 37.87 2.92
3598 3736 9.950680 GCTGATAATGGAATTTTTCTTCGATAA 57.049 29.630 0.00 0.00 37.87 1.75
3603 3741 8.986477 AATGGAATTTTTCTTCGATAAACAGG 57.014 30.769 0.00 0.00 26.74 4.00
3604 3742 7.753309 TGGAATTTTTCTTCGATAAACAGGA 57.247 32.000 0.00 0.00 0.00 3.86
3605 3743 8.172352 TGGAATTTTTCTTCGATAAACAGGAA 57.828 30.769 0.00 0.00 0.00 3.36
3606 3744 8.634444 TGGAATTTTTCTTCGATAAACAGGAAA 58.366 29.630 0.00 0.00 0.00 3.13
3607 3745 8.912658 GGAATTTTTCTTCGATAAACAGGAAAC 58.087 33.333 0.00 0.00 0.00 2.78
3608 3746 9.678941 GAATTTTTCTTCGATAAACAGGAAACT 57.321 29.630 0.00 0.00 46.44 2.66
3613 3751 9.550406 TTTCTTCGATAAACAGGAAACTTAAGA 57.450 29.630 10.09 0.00 40.21 2.10
3614 3752 9.720769 TTCTTCGATAAACAGGAAACTTAAGAT 57.279 29.630 10.09 0.00 40.21 2.40
3615 3753 9.151471 TCTTCGATAAACAGGAAACTTAAGATG 57.849 33.333 10.09 2.60 40.21 2.90
3616 3754 7.843490 TCGATAAACAGGAAACTTAAGATGG 57.157 36.000 10.09 0.00 40.21 3.51
3617 3755 7.617225 TCGATAAACAGGAAACTTAAGATGGA 58.383 34.615 10.09 0.00 40.21 3.41
3618 3756 8.265055 TCGATAAACAGGAAACTTAAGATGGAT 58.735 33.333 10.09 0.00 40.21 3.41
3619 3757 8.893727 CGATAAACAGGAAACTTAAGATGGATT 58.106 33.333 10.09 0.00 40.21 3.01
3621 3759 9.753674 ATAAACAGGAAACTTAAGATGGATTGA 57.246 29.630 10.09 0.00 40.21 2.57
3622 3760 8.655935 AAACAGGAAACTTAAGATGGATTGAT 57.344 30.769 10.09 0.00 40.21 2.57
3623 3761 7.636150 ACAGGAAACTTAAGATGGATTGATG 57.364 36.000 10.09 0.00 40.21 3.07
3624 3762 7.405292 ACAGGAAACTTAAGATGGATTGATGA 58.595 34.615 10.09 0.00 40.21 2.92
3625 3763 7.890127 ACAGGAAACTTAAGATGGATTGATGAA 59.110 33.333 10.09 0.00 40.21 2.57
3626 3764 8.404000 CAGGAAACTTAAGATGGATTGATGAAG 58.596 37.037 10.09 0.00 40.21 3.02
3627 3765 8.331740 AGGAAACTTAAGATGGATTGATGAAGA 58.668 33.333 10.09 0.00 37.44 2.87
3628 3766 8.619546 GGAAACTTAAGATGGATTGATGAAGAG 58.380 37.037 10.09 0.00 0.00 2.85
3629 3767 9.171877 GAAACTTAAGATGGATTGATGAAGAGT 57.828 33.333 10.09 0.00 0.00 3.24
3630 3768 8.503458 AACTTAAGATGGATTGATGAAGAGTG 57.497 34.615 10.09 0.00 0.00 3.51
3631 3769 6.541641 ACTTAAGATGGATTGATGAAGAGTGC 59.458 38.462 10.09 0.00 0.00 4.40
3632 3770 3.464907 AGATGGATTGATGAAGAGTGCG 58.535 45.455 0.00 0.00 0.00 5.34
3633 3771 1.372582 TGGATTGATGAAGAGTGCGC 58.627 50.000 0.00 0.00 0.00 6.09
3634 3772 1.065926 TGGATTGATGAAGAGTGCGCT 60.066 47.619 9.73 0.00 0.00 5.92
3635 3773 1.329906 GGATTGATGAAGAGTGCGCTG 59.670 52.381 3.44 0.00 0.00 5.18
3636 3774 2.274437 GATTGATGAAGAGTGCGCTGA 58.726 47.619 3.44 0.00 0.00 4.26
3637 3775 2.391616 TTGATGAAGAGTGCGCTGAT 57.608 45.000 3.44 0.00 0.00 2.90
3638 3776 3.525268 TTGATGAAGAGTGCGCTGATA 57.475 42.857 3.44 0.00 0.00 2.15
3639 3777 3.525268 TGATGAAGAGTGCGCTGATAA 57.475 42.857 3.44 0.00 0.00 1.75
3640 3778 4.063998 TGATGAAGAGTGCGCTGATAAT 57.936 40.909 3.44 0.00 0.00 1.28
3641 3779 3.805971 TGATGAAGAGTGCGCTGATAATG 59.194 43.478 3.44 0.00 0.00 1.90
3642 3780 2.554142 TGAAGAGTGCGCTGATAATGG 58.446 47.619 3.44 0.00 0.00 3.16
3643 3781 2.168313 TGAAGAGTGCGCTGATAATGGA 59.832 45.455 3.44 0.00 0.00 3.41
3687 3825 7.327975 TGAAACTTAAGATTAAGATGCTCCGA 58.672 34.615 17.10 0.00 42.05 4.55
3688 3826 7.492669 TGAAACTTAAGATTAAGATGCTCCGAG 59.507 37.037 17.10 0.00 42.05 4.63
3706 3855 2.170607 CGAGGGAATGTCCACAATACCT 59.829 50.000 0.00 0.00 38.64 3.08
3730 3879 6.649155 TGGATTTAGTCAGATCCAATTCGAA 58.351 36.000 0.00 0.00 46.55 3.71
3771 3920 1.035139 CAAGCCTTGGCAGTTGTTCT 58.965 50.000 14.54 0.00 0.00 3.01
3780 3929 2.369860 TGGCAGTTGTTCTGATCAGACT 59.630 45.455 25.07 16.05 46.27 3.24
3781 3930 3.578282 TGGCAGTTGTTCTGATCAGACTA 59.422 43.478 25.07 13.82 46.27 2.59
3782 3931 4.223700 TGGCAGTTGTTCTGATCAGACTAT 59.776 41.667 25.07 7.06 46.27 2.12
3783 3932 5.422012 TGGCAGTTGTTCTGATCAGACTATA 59.578 40.000 25.07 7.86 46.27 1.31
3819 3968 4.941325 CATACAGCATGCATCATACTCC 57.059 45.455 21.98 0.00 42.53 3.85
3820 3969 2.267174 ACAGCATGCATCATACTCCC 57.733 50.000 21.98 0.00 42.53 4.30
3821 3970 1.773052 ACAGCATGCATCATACTCCCT 59.227 47.619 21.98 0.00 42.53 4.20
3822 3971 2.224475 ACAGCATGCATCATACTCCCTC 60.224 50.000 21.98 0.00 42.53 4.30
3823 3972 1.350351 AGCATGCATCATACTCCCTCC 59.650 52.381 21.98 0.00 0.00 4.30
3824 3973 1.943046 GCATGCATCATACTCCCTCCG 60.943 57.143 14.21 0.00 0.00 4.63
3825 3974 1.345741 CATGCATCATACTCCCTCCGT 59.654 52.381 0.00 0.00 0.00 4.69
3826 3975 1.496060 TGCATCATACTCCCTCCGTT 58.504 50.000 0.00 0.00 0.00 4.44
3827 3976 1.412710 TGCATCATACTCCCTCCGTTC 59.587 52.381 0.00 0.00 0.00 3.95
3828 3977 1.270358 GCATCATACTCCCTCCGTTCC 60.270 57.143 0.00 0.00 0.00 3.62
3829 3978 2.320781 CATCATACTCCCTCCGTTCCT 58.679 52.381 0.00 0.00 0.00 3.36
3830 3979 3.497332 CATCATACTCCCTCCGTTCCTA 58.503 50.000 0.00 0.00 0.00 2.94
3831 3980 3.675348 TCATACTCCCTCCGTTCCTAA 57.325 47.619 0.00 0.00 0.00 2.69
3832 3981 3.985127 TCATACTCCCTCCGTTCCTAAA 58.015 45.455 0.00 0.00 0.00 1.85
3833 3982 4.553678 TCATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.886132 GTCCAACTTTAAACTTATAGATGGAGA 57.114 33.333 14.79 0.00 41.04 3.71
30 31 8.818057 CGTCCAACTTTAAACTTATAGATGGAG 58.182 37.037 14.79 8.74 41.04 3.86
31 32 7.767198 CCGTCCAACTTTAAACTTATAGATGGA 59.233 37.037 12.02 12.02 39.49 3.41
32 33 7.767198 TCCGTCCAACTTTAAACTTATAGATGG 59.233 37.037 8.83 8.83 36.60 3.51
33 34 8.712285 TCCGTCCAACTTTAAACTTATAGATG 57.288 34.615 0.00 0.00 0.00 2.90
34 35 9.901172 ATTCCGTCCAACTTTAAACTTATAGAT 57.099 29.630 0.00 0.00 0.00 1.98
41 42 9.471084 CATTTTTATTCCGTCCAACTTTAAACT 57.529 29.630 0.00 0.00 0.00 2.66
42 43 8.218441 GCATTTTTATTCCGTCCAACTTTAAAC 58.782 33.333 0.00 0.00 0.00 2.01
43 44 7.926555 TGCATTTTTATTCCGTCCAACTTTAAA 59.073 29.630 0.00 0.00 0.00 1.52
44 45 7.434492 TGCATTTTTATTCCGTCCAACTTTAA 58.566 30.769 0.00 0.00 0.00 1.52
45 46 6.982852 TGCATTTTTATTCCGTCCAACTTTA 58.017 32.000 0.00 0.00 0.00 1.85
46 47 5.848406 TGCATTTTTATTCCGTCCAACTTT 58.152 33.333 0.00 0.00 0.00 2.66
47 48 5.461032 TGCATTTTTATTCCGTCCAACTT 57.539 34.783 0.00 0.00 0.00 2.66
48 49 5.410067 CATGCATTTTTATTCCGTCCAACT 58.590 37.500 0.00 0.00 0.00 3.16
49 50 4.032786 GCATGCATTTTTATTCCGTCCAAC 59.967 41.667 14.21 0.00 0.00 3.77
50 51 4.180057 GCATGCATTTTTATTCCGTCCAA 58.820 39.130 14.21 0.00 0.00 3.53
51 52 3.194329 TGCATGCATTTTTATTCCGTCCA 59.806 39.130 18.46 0.00 0.00 4.02
52 53 3.779759 TGCATGCATTTTTATTCCGTCC 58.220 40.909 18.46 0.00 0.00 4.79
53 54 5.042593 TCATGCATGCATTTTTATTCCGTC 58.957 37.500 30.32 0.00 33.90 4.79
54 55 4.805192 GTCATGCATGCATTTTTATTCCGT 59.195 37.500 30.32 3.02 33.90 4.69
55 56 5.045215 AGTCATGCATGCATTTTTATTCCG 58.955 37.500 30.32 15.55 33.90 4.30
56 57 6.019318 GTGAGTCATGCATGCATTTTTATTCC 60.019 38.462 30.32 13.83 33.90 3.01
57 58 6.755141 AGTGAGTCATGCATGCATTTTTATTC 59.245 34.615 30.32 19.81 33.90 1.75
58 59 6.636705 AGTGAGTCATGCATGCATTTTTATT 58.363 32.000 30.32 12.75 33.90 1.40
59 60 6.216801 AGTGAGTCATGCATGCATTTTTAT 57.783 33.333 30.32 14.50 33.90 1.40
60 61 5.648178 AGTGAGTCATGCATGCATTTTTA 57.352 34.783 30.32 13.38 33.90 1.52
61 62 4.530710 AGTGAGTCATGCATGCATTTTT 57.469 36.364 30.32 17.63 33.90 1.94
62 63 4.530710 AAGTGAGTCATGCATGCATTTT 57.469 36.364 30.32 17.99 33.90 1.82
63 64 4.530710 AAAGTGAGTCATGCATGCATTT 57.469 36.364 30.32 18.35 33.90 2.32
64 65 4.219944 AGAAAAGTGAGTCATGCATGCATT 59.780 37.500 30.32 16.82 33.90 3.56
65 66 3.762288 AGAAAAGTGAGTCATGCATGCAT 59.238 39.130 27.46 27.46 37.08 3.96
66 67 3.151554 AGAAAAGTGAGTCATGCATGCA 58.848 40.909 25.04 25.04 0.00 3.96
67 68 3.844577 AGAAAAGTGAGTCATGCATGC 57.155 42.857 22.25 11.82 0.00 4.06
68 69 5.765176 TGAAAGAAAAGTGAGTCATGCATG 58.235 37.500 21.07 21.07 0.00 4.06
69 70 6.585695 ATGAAAGAAAAGTGAGTCATGCAT 57.414 33.333 0.00 0.00 0.00 3.96
70 71 7.692460 ATATGAAAGAAAAGTGAGTCATGCA 57.308 32.000 0.00 0.00 0.00 3.96
90 91 9.911138 GCATGATACCTGAGTGATCTATATATG 57.089 37.037 0.00 0.00 0.00 1.78
91 92 9.880254 AGCATGATACCTGAGTGATCTATATAT 57.120 33.333 0.00 0.00 0.00 0.86
93 94 9.880254 ATAGCATGATACCTGAGTGATCTATAT 57.120 33.333 0.00 0.00 0.00 0.86
94 95 9.129532 CATAGCATGATACCTGAGTGATCTATA 57.870 37.037 0.00 0.00 0.00 1.31
95 96 7.838193 TCATAGCATGATACCTGAGTGATCTAT 59.162 37.037 0.00 0.00 33.59 1.98
96 97 7.177878 TCATAGCATGATACCTGAGTGATCTA 58.822 38.462 0.00 0.00 33.59 1.98
97 98 6.015282 TCATAGCATGATACCTGAGTGATCT 58.985 40.000 0.00 0.00 33.59 2.75
98 99 6.278172 TCATAGCATGATACCTGAGTGATC 57.722 41.667 0.00 0.00 33.59 2.92
99 100 5.337410 GCTCATAGCATGATACCTGAGTGAT 60.337 44.000 18.17 0.00 41.89 3.06
100 101 4.021632 GCTCATAGCATGATACCTGAGTGA 60.022 45.833 18.17 6.52 41.89 3.41
101 102 4.021280 AGCTCATAGCATGATACCTGAGTG 60.021 45.833 18.17 2.85 45.56 3.51
102 103 4.021280 CAGCTCATAGCATGATACCTGAGT 60.021 45.833 18.17 6.99 45.56 3.41
103 104 4.496360 CAGCTCATAGCATGATACCTGAG 58.504 47.826 14.50 14.50 45.56 3.35
104 105 3.306571 GCAGCTCATAGCATGATACCTGA 60.307 47.826 0.00 0.00 45.56 3.86
105 106 3.001414 GCAGCTCATAGCATGATACCTG 58.999 50.000 0.00 1.32 45.56 4.00
106 107 2.636403 TGCAGCTCATAGCATGATACCT 59.364 45.455 0.00 0.00 45.56 3.08
107 108 3.049708 TGCAGCTCATAGCATGATACC 57.950 47.619 0.00 0.00 45.56 2.73
114 115 1.433837 CGTGCATGCAGCTCATAGCA 61.434 55.000 23.41 0.00 45.56 3.49
115 116 1.278937 CGTGCATGCAGCTCATAGC 59.721 57.895 23.41 5.54 45.94 2.97
116 117 1.278937 GCGTGCATGCAGCTCATAG 59.721 57.895 25.86 7.74 45.94 2.23
117 118 2.527867 CGCGTGCATGCAGCTCATA 61.528 57.895 29.23 0.00 45.94 2.15
118 119 3.872728 CGCGTGCATGCAGCTCAT 61.873 61.111 29.23 0.00 45.94 2.90
120 121 4.511443 GACGCGTGCATGCAGCTC 62.511 66.667 29.23 18.92 45.94 4.09
122 123 4.806481 CTGACGCGTGCATGCAGC 62.806 66.667 29.23 23.66 45.96 5.25
123 124 2.448153 AAACTGACGCGTGCATGCAG 62.448 55.000 29.23 20.05 34.15 4.41
124 125 2.057654 AAAACTGACGCGTGCATGCA 62.058 50.000 29.23 18.46 34.15 3.96
125 126 0.934436 AAAAACTGACGCGTGCATGC 60.934 50.000 20.70 21.27 0.00 4.06
126 127 3.162499 AAAAACTGACGCGTGCATG 57.838 47.368 20.70 6.13 0.00 4.06
142 143 6.254589 CGCCTGTGTGTTTTAATCAAGAAAAA 59.745 34.615 0.00 0.00 0.00 1.94
143 144 5.746245 CGCCTGTGTGTTTTAATCAAGAAAA 59.254 36.000 0.00 0.00 0.00 2.29
144 145 5.277825 CGCCTGTGTGTTTTAATCAAGAAA 58.722 37.500 0.00 0.00 0.00 2.52
145 146 4.261405 CCGCCTGTGTGTTTTAATCAAGAA 60.261 41.667 0.00 0.00 0.00 2.52
146 147 3.252215 CCGCCTGTGTGTTTTAATCAAGA 59.748 43.478 0.00 0.00 0.00 3.02
147 148 3.564511 CCGCCTGTGTGTTTTAATCAAG 58.435 45.455 0.00 0.00 0.00 3.02
148 149 2.287909 GCCGCCTGTGTGTTTTAATCAA 60.288 45.455 0.00 0.00 0.00 2.57
149 150 1.268352 GCCGCCTGTGTGTTTTAATCA 59.732 47.619 0.00 0.00 0.00 2.57
150 151 1.268352 TGCCGCCTGTGTGTTTTAATC 59.732 47.619 0.00 0.00 0.00 1.75
151 152 1.269448 CTGCCGCCTGTGTGTTTTAAT 59.731 47.619 0.00 0.00 0.00 1.40
152 153 0.665835 CTGCCGCCTGTGTGTTTTAA 59.334 50.000 0.00 0.00 0.00 1.52
153 154 0.464735 ACTGCCGCCTGTGTGTTTTA 60.465 50.000 0.00 0.00 0.00 1.52
154 155 1.319614 AACTGCCGCCTGTGTGTTTT 61.320 50.000 0.00 0.00 0.00 2.43
155 156 0.464735 TAACTGCCGCCTGTGTGTTT 60.465 50.000 0.00 0.00 0.00 2.83
156 157 1.147376 TAACTGCCGCCTGTGTGTT 59.853 52.632 0.00 0.00 0.00 3.32
157 158 1.597027 GTAACTGCCGCCTGTGTGT 60.597 57.895 0.00 0.00 0.00 3.72
158 159 1.301716 AGTAACTGCCGCCTGTGTG 60.302 57.895 0.00 0.00 0.00 3.82
159 160 1.301716 CAGTAACTGCCGCCTGTGT 60.302 57.895 0.00 0.00 0.00 3.72
160 161 3.566261 CAGTAACTGCCGCCTGTG 58.434 61.111 0.00 0.00 0.00 3.66
169 170 2.485038 TGACACATGCATGCAGTAACTG 59.515 45.455 26.69 20.32 34.12 3.16
170 171 2.781923 TGACACATGCATGCAGTAACT 58.218 42.857 26.69 5.62 0.00 2.24
171 172 3.770263 ATGACACATGCATGCAGTAAC 57.230 42.857 26.69 18.06 0.00 2.50
172 173 4.787260 AAATGACACATGCATGCAGTAA 57.213 36.364 26.69 18.05 0.00 2.24
173 174 4.943093 AGTAAATGACACATGCATGCAGTA 59.057 37.500 26.69 11.32 0.00 2.74
174 175 3.760151 AGTAAATGACACATGCATGCAGT 59.240 39.130 26.69 23.60 0.00 4.40
175 176 4.365899 AGTAAATGACACATGCATGCAG 57.634 40.909 26.69 20.59 0.00 4.41
176 177 4.699257 TGTAGTAAATGACACATGCATGCA 59.301 37.500 26.53 25.04 0.00 3.96
177 178 5.233957 TGTAGTAAATGACACATGCATGC 57.766 39.130 26.53 11.82 0.00 4.06
178 179 8.019094 CCATATGTAGTAAATGACACATGCATG 58.981 37.037 25.09 25.09 34.08 4.06
179 180 7.720957 ACCATATGTAGTAAATGACACATGCAT 59.279 33.333 1.24 0.00 34.08 3.96
180 181 7.053498 ACCATATGTAGTAAATGACACATGCA 58.947 34.615 1.24 0.00 34.08 3.96
181 182 7.496529 ACCATATGTAGTAAATGACACATGC 57.503 36.000 1.24 0.00 34.08 4.06
182 183 9.541143 TGTACCATATGTAGTAAATGACACATG 57.459 33.333 1.24 0.00 34.08 3.21
184 185 9.541143 CATGTACCATATGTAGTAAATGACACA 57.459 33.333 13.23 2.08 36.63 3.72
185 186 8.495949 GCATGTACCATATGTAGTAAATGACAC 58.504 37.037 19.00 5.31 36.63 3.67
186 187 8.207545 TGCATGTACCATATGTAGTAAATGACA 58.792 33.333 19.00 14.73 36.63 3.58
187 188 8.601845 TGCATGTACCATATGTAGTAAATGAC 57.398 34.615 19.00 13.20 36.63 3.06
188 189 9.051679 GTTGCATGTACCATATGTAGTAAATGA 57.948 33.333 19.00 7.70 36.63 2.57
189 190 8.009409 CGTTGCATGTACCATATGTAGTAAATG 58.991 37.037 13.81 13.81 37.28 2.32
190 191 7.172532 CCGTTGCATGTACCATATGTAGTAAAT 59.827 37.037 1.24 0.00 0.00 1.40
191 192 6.480651 CCGTTGCATGTACCATATGTAGTAAA 59.519 38.462 1.24 0.00 0.00 2.01
192 193 5.986741 CCGTTGCATGTACCATATGTAGTAA 59.013 40.000 1.24 0.00 0.00 2.24
193 194 5.534407 CCGTTGCATGTACCATATGTAGTA 58.466 41.667 1.24 0.00 0.00 1.82
194 195 4.377021 CCGTTGCATGTACCATATGTAGT 58.623 43.478 1.24 0.00 0.00 2.73
195 196 3.186409 GCCGTTGCATGTACCATATGTAG 59.814 47.826 1.24 0.00 37.47 2.74
196 197 3.135225 GCCGTTGCATGTACCATATGTA 58.865 45.455 1.24 0.00 37.47 2.29
197 198 1.946768 GCCGTTGCATGTACCATATGT 59.053 47.619 1.24 0.00 37.47 2.29
198 199 2.221169 AGCCGTTGCATGTACCATATG 58.779 47.619 0.00 0.00 41.13 1.78
199 200 2.104792 AGAGCCGTTGCATGTACCATAT 59.895 45.455 0.00 0.00 41.13 1.78
200 201 1.484653 AGAGCCGTTGCATGTACCATA 59.515 47.619 0.00 0.00 41.13 2.74
201 202 0.253044 AGAGCCGTTGCATGTACCAT 59.747 50.000 0.00 0.00 41.13 3.55
202 203 0.391130 GAGAGCCGTTGCATGTACCA 60.391 55.000 0.00 0.00 41.13 3.25
203 204 1.421410 CGAGAGCCGTTGCATGTACC 61.421 60.000 0.00 0.00 41.13 3.34
204 205 1.999051 CGAGAGCCGTTGCATGTAC 59.001 57.895 0.00 0.00 41.13 2.90
205 206 4.494811 CGAGAGCCGTTGCATGTA 57.505 55.556 0.00 0.00 41.13 2.29
214 215 1.828832 GATCTACACAACGAGAGCCG 58.171 55.000 0.00 0.00 45.44 5.52
215 216 1.534175 CCGATCTACACAACGAGAGCC 60.534 57.143 0.00 0.00 0.00 4.70
216 217 1.400846 TCCGATCTACACAACGAGAGC 59.599 52.381 0.00 0.00 0.00 4.09
217 218 2.418976 TGTCCGATCTACACAACGAGAG 59.581 50.000 0.00 0.00 0.00 3.20
218 219 2.418976 CTGTCCGATCTACACAACGAGA 59.581 50.000 0.00 0.00 0.00 4.04
219 220 2.418976 TCTGTCCGATCTACACAACGAG 59.581 50.000 0.00 0.00 0.00 4.18
220 221 2.429478 TCTGTCCGATCTACACAACGA 58.571 47.619 0.00 0.00 0.00 3.85
221 222 2.913777 TCTGTCCGATCTACACAACG 57.086 50.000 0.00 0.00 0.00 4.10
222 223 6.273825 ACAATATCTGTCCGATCTACACAAC 58.726 40.000 0.00 0.00 29.87 3.32
223 224 6.465439 ACAATATCTGTCCGATCTACACAA 57.535 37.500 0.00 0.00 29.87 3.33
224 225 6.096282 TCAACAATATCTGTCCGATCTACACA 59.904 38.462 0.00 0.00 37.23 3.72
225 226 6.504398 TCAACAATATCTGTCCGATCTACAC 58.496 40.000 0.00 0.00 37.23 2.90
226 227 6.709018 TCAACAATATCTGTCCGATCTACA 57.291 37.500 0.00 0.00 37.23 2.74
227 228 7.867909 TCAATCAACAATATCTGTCCGATCTAC 59.132 37.037 0.00 0.00 37.23 2.59
228 229 7.951591 TCAATCAACAATATCTGTCCGATCTA 58.048 34.615 0.00 0.00 37.23 1.98
229 230 6.820335 TCAATCAACAATATCTGTCCGATCT 58.180 36.000 0.00 0.00 37.23 2.75
230 231 7.601886 AGATCAATCAACAATATCTGTCCGATC 59.398 37.037 0.00 0.00 37.23 3.69
231 232 7.448420 AGATCAATCAACAATATCTGTCCGAT 58.552 34.615 0.00 0.00 37.23 4.18
232 233 6.820335 AGATCAATCAACAATATCTGTCCGA 58.180 36.000 0.00 0.00 37.23 4.55
233 234 7.869937 AGTAGATCAATCAACAATATCTGTCCG 59.130 37.037 0.00 0.00 37.23 4.79
245 246 8.940952 GCCCTTGAATATAGTAGATCAATCAAC 58.059 37.037 0.00 0.00 31.92 3.18
246 247 8.884323 AGCCCTTGAATATAGTAGATCAATCAA 58.116 33.333 0.00 0.00 31.92 2.57
247 248 8.441311 AGCCCTTGAATATAGTAGATCAATCA 57.559 34.615 0.00 0.00 31.92 2.57
262 263 8.991275 TCATCCAAATTAATTTAGCCCTTGAAT 58.009 29.630 12.98 0.00 0.00 2.57
263 264 8.372877 TCATCCAAATTAATTTAGCCCTTGAA 57.627 30.769 12.98 0.00 0.00 2.69
264 265 7.969690 TCATCCAAATTAATTTAGCCCTTGA 57.030 32.000 12.98 8.10 0.00 3.02
265 266 8.206189 ACATCATCCAAATTAATTTAGCCCTTG 58.794 33.333 12.98 9.78 0.00 3.61
266 267 8.206189 CACATCATCCAAATTAATTTAGCCCTT 58.794 33.333 12.98 0.00 0.00 3.95
267 268 7.202029 CCACATCATCCAAATTAATTTAGCCCT 60.202 37.037 12.98 0.00 0.00 5.19
268 269 6.930722 CCACATCATCCAAATTAATTTAGCCC 59.069 38.462 12.98 0.00 0.00 5.19
269 270 6.424812 GCCACATCATCCAAATTAATTTAGCC 59.575 38.462 12.98 0.00 0.00 3.93
270 271 7.212274 AGCCACATCATCCAAATTAATTTAGC 58.788 34.615 12.98 4.53 0.00 3.09
271 272 8.415553 TGAGCCACATCATCCAAATTAATTTAG 58.584 33.333 12.98 6.57 0.00 1.85
272 273 8.303780 TGAGCCACATCATCCAAATTAATTTA 57.696 30.769 12.98 0.00 0.00 1.40
273 274 7.185318 TGAGCCACATCATCCAAATTAATTT 57.815 32.000 7.64 7.64 0.00 1.82
274 275 6.795144 TGAGCCACATCATCCAAATTAATT 57.205 33.333 0.00 0.00 0.00 1.40
275 276 6.183360 CCTTGAGCCACATCATCCAAATTAAT 60.183 38.462 0.00 0.00 0.00 1.40
276 277 5.127519 CCTTGAGCCACATCATCCAAATTAA 59.872 40.000 0.00 0.00 0.00 1.40
277 278 4.646040 CCTTGAGCCACATCATCCAAATTA 59.354 41.667 0.00 0.00 0.00 1.40
278 279 3.449737 CCTTGAGCCACATCATCCAAATT 59.550 43.478 0.00 0.00 0.00 1.82
279 280 3.028850 CCTTGAGCCACATCATCCAAAT 58.971 45.455 0.00 0.00 0.00 2.32
280 281 2.041485 TCCTTGAGCCACATCATCCAAA 59.959 45.455 0.00 0.00 0.00 3.28
281 282 1.634973 TCCTTGAGCCACATCATCCAA 59.365 47.619 0.00 0.00 0.00 3.53
282 283 1.211212 CTCCTTGAGCCACATCATCCA 59.789 52.381 0.00 0.00 0.00 3.41
283 284 1.487976 TCTCCTTGAGCCACATCATCC 59.512 52.381 0.00 0.00 0.00 3.51
284 285 2.996249 TCTCCTTGAGCCACATCATC 57.004 50.000 0.00 0.00 0.00 2.92
285 286 2.683152 GCTTCTCCTTGAGCCACATCAT 60.683 50.000 0.00 0.00 0.00 2.45
286 287 1.339438 GCTTCTCCTTGAGCCACATCA 60.339 52.381 0.00 0.00 0.00 3.07
287 288 1.377536 GCTTCTCCTTGAGCCACATC 58.622 55.000 0.00 0.00 0.00 3.06
288 289 0.392193 CGCTTCTCCTTGAGCCACAT 60.392 55.000 0.00 0.00 0.00 3.21
289 290 1.004560 CGCTTCTCCTTGAGCCACA 60.005 57.895 0.00 0.00 0.00 4.17
290 291 0.739112 CTCGCTTCTCCTTGAGCCAC 60.739 60.000 0.00 0.00 0.00 5.01
291 292 0.900182 TCTCGCTTCTCCTTGAGCCA 60.900 55.000 0.00 0.00 0.00 4.75
292 293 0.247736 TTCTCGCTTCTCCTTGAGCC 59.752 55.000 0.00 0.00 0.00 4.70
293 294 1.999024 CTTTCTCGCTTCTCCTTGAGC 59.001 52.381 0.00 0.00 0.00 4.26
294 295 3.311486 ACTTTCTCGCTTCTCCTTGAG 57.689 47.619 0.00 0.00 0.00 3.02
295 296 3.322254 AGAACTTTCTCGCTTCTCCTTGA 59.678 43.478 0.00 0.00 29.94 3.02
296 297 3.658709 AGAACTTTCTCGCTTCTCCTTG 58.341 45.455 0.00 0.00 29.94 3.61
297 298 4.344359 AAGAACTTTCTCGCTTCTCCTT 57.656 40.909 0.00 0.00 36.28 3.36
298 299 4.525100 ACTAAGAACTTTCTCGCTTCTCCT 59.475 41.667 0.00 0.00 36.28 3.69
299 300 4.811908 ACTAAGAACTTTCTCGCTTCTCC 58.188 43.478 0.00 0.00 36.28 3.71
300 301 6.525280 CACTACTAAGAACTTTCTCGCTTCTC 59.475 42.308 0.00 0.00 36.28 2.87
301 302 6.383415 CACTACTAAGAACTTTCTCGCTTCT 58.617 40.000 0.00 0.00 36.28 2.85
302 303 5.573669 CCACTACTAAGAACTTTCTCGCTTC 59.426 44.000 0.00 0.00 36.28 3.86
303 304 5.471257 CCACTACTAAGAACTTTCTCGCTT 58.529 41.667 0.00 0.00 36.28 4.68
304 305 4.082136 CCCACTACTAAGAACTTTCTCGCT 60.082 45.833 0.00 0.00 36.28 4.93
305 306 4.174762 CCCACTACTAAGAACTTTCTCGC 58.825 47.826 0.00 0.00 36.28 5.03
306 307 4.381718 CCCCCACTACTAAGAACTTTCTCG 60.382 50.000 0.00 0.00 36.28 4.04
307 308 4.623409 GCCCCCACTACTAAGAACTTTCTC 60.623 50.000 0.00 0.00 36.28 2.87
308 309 3.263681 GCCCCCACTACTAAGAACTTTCT 59.736 47.826 0.00 0.00 39.74 2.52
309 310 3.263681 AGCCCCCACTACTAAGAACTTTC 59.736 47.826 0.00 0.00 0.00 2.62
310 311 3.257578 AGCCCCCACTACTAAGAACTTT 58.742 45.455 0.00 0.00 0.00 2.66
311 312 2.917205 AGCCCCCACTACTAAGAACTT 58.083 47.619 0.00 0.00 0.00 2.66
312 313 2.644060 AGCCCCCACTACTAAGAACT 57.356 50.000 0.00 0.00 0.00 3.01
313 314 2.102757 GCTAGCCCCCACTACTAAGAAC 59.897 54.545 2.29 0.00 0.00 3.01
314 315 2.023307 AGCTAGCCCCCACTACTAAGAA 60.023 50.000 12.13 0.00 0.00 2.52
315 316 1.574339 AGCTAGCCCCCACTACTAAGA 59.426 52.381 12.13 0.00 0.00 2.10
316 317 2.089600 AGCTAGCCCCCACTACTAAG 57.910 55.000 12.13 0.00 0.00 2.18
317 318 3.917324 ATAGCTAGCCCCCACTACTAA 57.083 47.619 12.13 0.00 0.00 2.24
318 319 3.917324 AATAGCTAGCCCCCACTACTA 57.083 47.619 12.13 0.00 0.00 1.82
319 320 2.797285 AATAGCTAGCCCCCACTACT 57.203 50.000 12.13 0.00 0.00 2.57
320 321 4.158015 TCTAAATAGCTAGCCCCCACTAC 58.842 47.826 12.13 0.00 0.00 2.73
321 322 4.480777 TCTAAATAGCTAGCCCCCACTA 57.519 45.455 12.13 0.00 0.00 2.74
322 323 3.346146 TCTAAATAGCTAGCCCCCACT 57.654 47.619 12.13 0.00 0.00 4.00
323 324 5.959583 ATATCTAAATAGCTAGCCCCCAC 57.040 43.478 12.13 0.00 0.00 4.61
324 325 9.381038 CTATTATATCTAAATAGCTAGCCCCCA 57.619 37.037 12.13 0.00 31.96 4.96
325 326 9.603189 TCTATTATATCTAAATAGCTAGCCCCC 57.397 37.037 12.13 0.00 37.02 5.40
369 370 9.673454 CGTTACTAGCCAAAAATAGTTTTTCTT 57.327 29.630 0.00 0.00 40.65 2.52
370 371 8.843262 ACGTTACTAGCCAAAAATAGTTTTTCT 58.157 29.630 0.00 2.24 40.65 2.52
371 372 8.898792 CACGTTACTAGCCAAAAATAGTTTTTC 58.101 33.333 0.00 0.00 40.65 2.29
372 373 7.380333 GCACGTTACTAGCCAAAAATAGTTTTT 59.620 33.333 0.00 0.00 43.20 1.94
373 374 6.859508 GCACGTTACTAGCCAAAAATAGTTTT 59.140 34.615 0.00 0.00 37.43 2.43
374 375 6.376177 GCACGTTACTAGCCAAAAATAGTTT 58.624 36.000 0.00 0.00 34.21 2.66
375 376 5.934921 GCACGTTACTAGCCAAAAATAGTT 58.065 37.500 0.00 0.00 34.21 2.24
376 377 5.541098 GCACGTTACTAGCCAAAAATAGT 57.459 39.130 0.00 0.00 36.28 2.12
386 387 5.479716 ACATTTATTGGCACGTTACTAGC 57.520 39.130 0.00 0.00 0.00 3.42
387 388 7.254319 CCACTACATTTATTGGCACGTTACTAG 60.254 40.741 0.00 0.00 0.00 2.57
388 389 6.535865 CCACTACATTTATTGGCACGTTACTA 59.464 38.462 0.00 0.00 0.00 1.82
389 390 5.353123 CCACTACATTTATTGGCACGTTACT 59.647 40.000 0.00 0.00 0.00 2.24
390 391 5.565695 CCACTACATTTATTGGCACGTTAC 58.434 41.667 0.00 0.00 0.00 2.50
391 392 5.804692 CCACTACATTTATTGGCACGTTA 57.195 39.130 0.00 0.00 0.00 3.18
392 393 4.695217 CCACTACATTTATTGGCACGTT 57.305 40.909 0.00 0.00 0.00 3.99
416 417 1.897133 GCTGGGGTATTTCGGGTTTTT 59.103 47.619 0.00 0.00 0.00 1.94
417 418 1.203075 TGCTGGGGTATTTCGGGTTTT 60.203 47.619 0.00 0.00 0.00 2.43
418 419 0.406361 TGCTGGGGTATTTCGGGTTT 59.594 50.000 0.00 0.00 0.00 3.27
419 420 0.406361 TTGCTGGGGTATTTCGGGTT 59.594 50.000 0.00 0.00 0.00 4.11
420 421 0.323087 GTTGCTGGGGTATTTCGGGT 60.323 55.000 0.00 0.00 0.00 5.28
421 422 0.322997 TGTTGCTGGGGTATTTCGGG 60.323 55.000 0.00 0.00 0.00 5.14
422 423 1.540267 TTGTTGCTGGGGTATTTCGG 58.460 50.000 0.00 0.00 0.00 4.30
423 424 3.313690 GTTTTGTTGCTGGGGTATTTCG 58.686 45.455 0.00 0.00 0.00 3.46
424 425 3.659786 GGTTTTGTTGCTGGGGTATTTC 58.340 45.455 0.00 0.00 0.00 2.17
425 426 2.036604 CGGTTTTGTTGCTGGGGTATTT 59.963 45.455 0.00 0.00 0.00 1.40
426 427 1.616374 CGGTTTTGTTGCTGGGGTATT 59.384 47.619 0.00 0.00 0.00 1.89
427 428 1.202952 TCGGTTTTGTTGCTGGGGTAT 60.203 47.619 0.00 0.00 0.00 2.73
428 429 0.183014 TCGGTTTTGTTGCTGGGGTA 59.817 50.000 0.00 0.00 0.00 3.69
429 430 1.076632 TCGGTTTTGTTGCTGGGGT 60.077 52.632 0.00 0.00 0.00 4.95
430 431 0.821711 TCTCGGTTTTGTTGCTGGGG 60.822 55.000 0.00 0.00 0.00 4.96
431 432 0.593128 CTCTCGGTTTTGTTGCTGGG 59.407 55.000 0.00 0.00 0.00 4.45
432 433 1.264288 GACTCTCGGTTTTGTTGCTGG 59.736 52.381 0.00 0.00 0.00 4.85
433 434 1.070577 CGACTCTCGGTTTTGTTGCTG 60.071 52.381 0.00 0.00 36.00 4.41
434 435 1.217882 CGACTCTCGGTTTTGTTGCT 58.782 50.000 0.00 0.00 36.00 3.91
435 436 0.384353 GCGACTCTCGGTTTTGTTGC 60.384 55.000 0.00 0.00 40.84 4.17
436 437 0.234884 GGCGACTCTCGGTTTTGTTG 59.765 55.000 0.00 0.00 40.84 3.33
437 438 0.106149 AGGCGACTCTCGGTTTTGTT 59.894 50.000 0.00 0.00 40.84 2.83
438 439 0.106149 AAGGCGACTCTCGGTTTTGT 59.894 50.000 0.00 0.00 42.68 2.83
439 440 1.226746 AAAGGCGACTCTCGGTTTTG 58.773 50.000 0.00 0.00 42.68 2.44
440 441 1.871676 GAAAAGGCGACTCTCGGTTTT 59.128 47.619 0.00 0.00 42.68 2.43
441 442 1.070289 AGAAAAGGCGACTCTCGGTTT 59.930 47.619 0.00 0.00 42.68 3.27
442 443 0.680061 AGAAAAGGCGACTCTCGGTT 59.320 50.000 0.00 0.00 42.68 4.44
443 444 0.680061 AAGAAAAGGCGACTCTCGGT 59.320 50.000 0.00 0.00 42.68 4.69
444 445 1.727335 GAAAGAAAAGGCGACTCTCGG 59.273 52.381 0.00 0.00 42.68 4.63
445 446 1.727335 GGAAAGAAAAGGCGACTCTCG 59.273 52.381 0.00 0.00 42.68 4.04
446 447 3.046968 AGGAAAGAAAAGGCGACTCTC 57.953 47.619 0.00 0.00 42.68 3.20
447 448 3.071747 AGAAGGAAAGAAAAGGCGACTCT 59.928 43.478 0.00 0.00 42.68 3.24
448 449 3.403968 AGAAGGAAAGAAAAGGCGACTC 58.596 45.455 0.00 0.00 42.68 3.36
450 451 2.484651 GGAGAAGGAAAGAAAAGGCGAC 59.515 50.000 0.00 0.00 0.00 5.19
451 452 2.105821 TGGAGAAGGAAAGAAAAGGCGA 59.894 45.455 0.00 0.00 0.00 5.54
452 453 2.504367 TGGAGAAGGAAAGAAAAGGCG 58.496 47.619 0.00 0.00 0.00 5.52
453 454 5.474578 AAATGGAGAAGGAAAGAAAAGGC 57.525 39.130 0.00 0.00 0.00 4.35
560 561 1.828331 GCGACGTGAGCCTCGTTTTT 61.828 55.000 0.00 0.00 41.64 1.94
574 575 3.585748 TTGTCTTCTTCTTTTGCGACG 57.414 42.857 0.00 0.00 0.00 5.12
595 596 0.329931 TCTCTCTGGAGGAGCTTCGT 59.670 55.000 0.00 0.00 41.60 3.85
607 608 7.917505 GCTTATTCTTTTCTCTCTCTCTCTCTG 59.082 40.741 0.00 0.00 0.00 3.35
674 675 1.610379 GGGTGCTGGGCCATTTCTT 60.610 57.895 6.72 0.00 0.00 2.52
778 779 2.626467 GGTTTGGGGAGGGGATGCT 61.626 63.158 0.00 0.00 0.00 3.79
779 780 2.042944 GGTTTGGGGAGGGGATGC 60.043 66.667 0.00 0.00 0.00 3.91
781 782 2.620464 GGGGTTTGGGGAGGGGAT 60.620 66.667 0.00 0.00 0.00 3.85
783 784 3.672503 CTGGGGTTTGGGGAGGGG 61.673 72.222 0.00 0.00 0.00 4.79
784 785 2.534272 TCTGGGGTTTGGGGAGGG 60.534 66.667 0.00 0.00 0.00 4.30
883 884 4.247380 GAGATGCGGAGGCTGGGG 62.247 72.222 0.00 0.00 40.82 4.96
949 950 1.548985 CGCGCGTAGATCTGAAACG 59.451 57.895 24.19 11.36 39.55 3.60
953 954 3.507803 CTCGCGCGCGTAGATCTGA 62.508 63.158 46.54 27.65 40.74 3.27
1058 1060 1.196808 CAAGACAAATACACGGCGCTT 59.803 47.619 6.90 0.00 0.00 4.68
1077 1079 3.834726 CCAACAACTCGGCAACCA 58.165 55.556 0.00 0.00 0.00 3.67
1083 1085 1.289109 CTACACGGCCAACAACTCGG 61.289 60.000 2.24 0.00 0.00 4.63
1087 1089 2.064014 GTCTACTACACGGCCAACAAC 58.936 52.381 2.24 0.00 0.00 3.32
1088 1090 1.965643 AGTCTACTACACGGCCAACAA 59.034 47.619 2.24 0.00 0.00 2.83
1157 1159 2.046023 CAGCGGCACATTCCTCCA 60.046 61.111 1.45 0.00 0.00 3.86
1170 1172 0.882042 ACAGCTTCTCCACAACAGCG 60.882 55.000 0.00 0.00 37.35 5.18
1200 1202 2.229792 GCCCTCAACAACATCACTTGA 58.770 47.619 0.00 0.00 0.00 3.02
1245 1247 2.029518 CAGTGAGGCAGCGACACA 59.970 61.111 18.40 0.57 37.05 3.72
1271 1273 8.420222 ACTAGACAGGATCTATCAAACATGAAG 58.580 37.037 0.00 0.00 39.28 3.02
1365 1367 4.625972 AAAGTTAAAACCACAGGTGACG 57.374 40.909 0.00 0.00 35.34 4.35
1440 1442 6.510536 CACAGTAATCTCTACATCAGCATCA 58.489 40.000 0.00 0.00 0.00 3.07
1450 1452 5.639506 TGAAAGCAAGCACAGTAATCTCTAC 59.360 40.000 0.00 0.00 0.00 2.59
1454 1456 4.392940 ACTGAAAGCAAGCACAGTAATCT 58.607 39.130 14.26 0.00 40.96 2.40
1473 1475 5.954296 ATCAGAACAGACCATTTCAACTG 57.046 39.130 0.00 0.00 36.58 3.16
1570 1572 1.138568 TCCGGTTGGGTTCCTACAAA 58.861 50.000 0.00 0.00 37.00 2.83
1581 1583 1.051812 AGCATCCTCTATCCGGTTGG 58.948 55.000 0.00 0.00 0.00 3.77
1700 1709 4.250464 TGACCGAATGACCACTAAATGAC 58.750 43.478 0.00 0.00 0.00 3.06
1706 1715 5.128008 TCACATAATGACCGAATGACCACTA 59.872 40.000 0.00 0.00 29.99 2.74
1717 1726 3.302555 GCAATGCATCACATAATGACCG 58.697 45.455 0.00 0.00 41.24 4.79
1739 1748 5.665459 AGACATTGTTATACTGCTCAGACC 58.335 41.667 3.60 0.00 0.00 3.85
1741 1750 8.478066 ACATTAGACATTGTTATACTGCTCAGA 58.522 33.333 3.60 0.00 0.00 3.27
1742 1751 8.654230 ACATTAGACATTGTTATACTGCTCAG 57.346 34.615 0.00 0.00 0.00 3.35
1821 1832 5.263599 AGGCATCACATAAAGACCAAATGA 58.736 37.500 0.00 0.00 0.00 2.57
1847 1858 7.015877 ACACAGTCAATAACAGTTACCCTAGAA 59.984 37.037 0.00 0.00 0.00 2.10
1851 1862 5.071250 TCACACAGTCAATAACAGTTACCCT 59.929 40.000 0.00 0.00 0.00 4.34
1854 1865 6.073276 TGCATCACACAGTCAATAACAGTTAC 60.073 38.462 0.00 0.00 0.00 2.50
1855 1866 5.994668 TGCATCACACAGTCAATAACAGTTA 59.005 36.000 0.00 0.00 0.00 2.24
1862 1873 4.735985 GCATTTGCATCACACAGTCAATA 58.264 39.130 0.00 0.00 41.59 1.90
1917 1929 6.068853 TCCTCCCTGATCAACATAAAGGAAAT 60.069 38.462 0.00 0.00 31.13 2.17
2318 2330 3.732219 CACTGTGCAAATGAACATGACAC 59.268 43.478 0.00 0.00 32.14 3.67
2362 2374 4.393062 CAGACCACATGTTCATTGAGGTAC 59.607 45.833 0.00 0.00 38.04 3.34
2466 2547 5.105351 AGCTAAGCAACAAACAAGGAAAACT 60.105 36.000 0.00 0.00 0.00 2.66
2475 2556 4.223320 GCTACAAGCTAAGCAACAAACA 57.777 40.909 9.98 0.00 38.45 2.83
2533 2614 3.320541 TCCATACAAGGTTGGTTTGCAAG 59.679 43.478 0.00 0.00 34.48 4.01
2541 2622 2.094675 CCAGCTTCCATACAAGGTTGG 58.905 52.381 0.00 0.00 31.60 3.77
2542 2623 3.071874 TCCAGCTTCCATACAAGGTTG 57.928 47.619 0.00 0.00 31.60 3.77
2567 2648 5.895534 ACAGGATATGGAATTTGTCAGCAAT 59.104 36.000 0.00 0.00 34.18 3.56
2662 2743 5.250543 TCAGAATGGAATCCTTACCTTCACA 59.749 40.000 0.00 0.00 36.16 3.58
2735 2819 8.691661 AAAGAACAGCCAAAAGTTAGATTAGA 57.308 30.769 0.00 0.00 0.00 2.10
2885 2969 2.650608 GTTTCAGACATGGAACGCAAC 58.349 47.619 0.00 0.00 35.23 4.17
3010 3094 5.182001 ACAGAGATAGCACCAACAAAATGAC 59.818 40.000 0.00 0.00 0.00 3.06
3045 3130 5.474532 TGCAAGCTCAAAATCAACATACTCT 59.525 36.000 0.00 0.00 0.00 3.24
3103 3188 4.637276 ACATCACGTGTGGAGTAATTTCA 58.363 39.130 16.51 0.00 40.28 2.69
3120 3205 2.995939 GCAGATCGTTCAGTGAACATCA 59.004 45.455 30.17 16.71 42.05 3.07
3142 3227 8.243426 TGCAATAATTCATCAAAGAGTGGTTAC 58.757 33.333 0.00 0.00 0.00 2.50
3180 3265 3.316308 GCATTGCTTACTATCAACCCTGG 59.684 47.826 0.16 0.00 0.00 4.45
3182 3267 3.555966 GGCATTGCTTACTATCAACCCT 58.444 45.455 8.82 0.00 0.00 4.34
3200 3285 1.164411 CGCTAATTCACAAGTGGGCA 58.836 50.000 0.00 0.00 0.00 5.36
3249 3334 2.185004 AACCACAATGCTCTAACGCT 57.815 45.000 0.00 0.00 0.00 5.07
3251 3336 4.035208 GGGATAAACCACAATGCTCTAACG 59.965 45.833 0.00 0.00 41.20 3.18
3252 3337 4.947388 TGGGATAAACCACAATGCTCTAAC 59.053 41.667 0.00 0.00 41.20 2.34
3328 3425 5.477607 TTCAGGAAAACGGAGAGTATTCA 57.522 39.130 0.00 0.00 0.00 2.57
3384 3481 8.236084 GCTTTGCCAATACATCATATTGATTC 57.764 34.615 7.99 0.00 34.28 2.52
3426 3564 8.122646 TCCCTTCTTAGTCCCTATCTACTTTA 57.877 38.462 0.00 0.00 0.00 1.85
3442 3580 7.616935 TCCTATCTACTTTCGTTTCCCTTCTTA 59.383 37.037 0.00 0.00 0.00 2.10
3443 3581 6.439692 TCCTATCTACTTTCGTTTCCCTTCTT 59.560 38.462 0.00 0.00 0.00 2.52
3444 3582 5.956563 TCCTATCTACTTTCGTTTCCCTTCT 59.043 40.000 0.00 0.00 0.00 2.85
3445 3583 6.218108 TCCTATCTACTTTCGTTTCCCTTC 57.782 41.667 0.00 0.00 0.00 3.46
3446 3584 6.212993 AGTTCCTATCTACTTTCGTTTCCCTT 59.787 38.462 0.00 0.00 0.00 3.95
3447 3585 5.720520 AGTTCCTATCTACTTTCGTTTCCCT 59.279 40.000 0.00 0.00 0.00 4.20
3448 3586 5.975282 AGTTCCTATCTACTTTCGTTTCCC 58.025 41.667 0.00 0.00 0.00 3.97
3449 3587 6.041511 GGAGTTCCTATCTACTTTCGTTTCC 58.958 44.000 0.00 0.00 0.00 3.13
3450 3588 6.041511 GGGAGTTCCTATCTACTTTCGTTTC 58.958 44.000 0.00 0.00 35.95 2.78
3451 3589 5.482878 TGGGAGTTCCTATCTACTTTCGTTT 59.517 40.000 0.00 0.00 36.20 3.60
3452 3590 5.021458 TGGGAGTTCCTATCTACTTTCGTT 58.979 41.667 0.00 0.00 36.20 3.85
3453 3591 4.401837 GTGGGAGTTCCTATCTACTTTCGT 59.598 45.833 0.00 0.00 36.20 3.85
3454 3592 4.645588 AGTGGGAGTTCCTATCTACTTTCG 59.354 45.833 0.00 0.00 36.20 3.46
3455 3593 5.422650 ACAGTGGGAGTTCCTATCTACTTTC 59.577 44.000 0.00 0.00 36.20 2.62
3456 3594 5.342866 ACAGTGGGAGTTCCTATCTACTTT 58.657 41.667 0.00 0.00 36.20 2.66
3457 3595 4.949121 ACAGTGGGAGTTCCTATCTACTT 58.051 43.478 0.00 0.00 36.20 2.24
3458 3596 4.611564 ACAGTGGGAGTTCCTATCTACT 57.388 45.455 0.00 0.00 36.20 2.57
3459 3597 5.692928 TCTACAGTGGGAGTTCCTATCTAC 58.307 45.833 0.00 0.00 36.20 2.59
3460 3598 5.988865 TCTACAGTGGGAGTTCCTATCTA 57.011 43.478 0.00 0.00 36.20 1.98
3461 3599 4.883021 TCTACAGTGGGAGTTCCTATCT 57.117 45.455 0.00 0.00 36.20 1.98
3462 3600 4.896482 ACATCTACAGTGGGAGTTCCTATC 59.104 45.833 0.00 0.00 36.20 2.08
3463 3601 4.651503 CACATCTACAGTGGGAGTTCCTAT 59.348 45.833 0.00 0.00 36.20 2.57
3464 3602 4.023980 CACATCTACAGTGGGAGTTCCTA 58.976 47.826 0.00 0.00 36.20 2.94
3465 3603 2.834549 CACATCTACAGTGGGAGTTCCT 59.165 50.000 0.00 0.00 36.20 3.36
3466 3604 3.252974 CACATCTACAGTGGGAGTTCC 57.747 52.381 0.00 0.00 33.43 3.62
3508 3646 5.744345 CGGAATTCGCTATGCTATAAGGTAG 59.256 44.000 0.00 0.00 0.00 3.18
3532 3670 2.515926 TGGATCGAGCTAGCAATCAC 57.484 50.000 18.83 10.68 0.00 3.06
3571 3709 6.486248 TCGAAGAAAAATTCCATTATCAGCG 58.514 36.000 0.00 0.00 0.00 5.18
3587 3725 9.550406 TCTTAAGTTTCCTGTTTATCGAAGAAA 57.450 29.630 1.63 0.00 43.58 2.52
3588 3726 9.720769 ATCTTAAGTTTCCTGTTTATCGAAGAA 57.279 29.630 1.63 0.00 43.58 2.52
3589 3727 9.151471 CATCTTAAGTTTCCTGTTTATCGAAGA 57.849 33.333 1.63 0.00 45.75 2.87
3590 3728 8.391106 CCATCTTAAGTTTCCTGTTTATCGAAG 58.609 37.037 1.63 0.00 0.00 3.79
3591 3729 8.098286 TCCATCTTAAGTTTCCTGTTTATCGAA 58.902 33.333 1.63 0.00 0.00 3.71
3592 3730 7.617225 TCCATCTTAAGTTTCCTGTTTATCGA 58.383 34.615 1.63 0.00 0.00 3.59
3593 3731 7.843490 TCCATCTTAAGTTTCCTGTTTATCG 57.157 36.000 1.63 0.00 0.00 2.92
3595 3733 9.753674 TCAATCCATCTTAAGTTTCCTGTTTAT 57.246 29.630 1.63 0.00 0.00 1.40
3596 3734 9.753674 ATCAATCCATCTTAAGTTTCCTGTTTA 57.246 29.630 1.63 0.00 0.00 2.01
3597 3735 8.526147 CATCAATCCATCTTAAGTTTCCTGTTT 58.474 33.333 1.63 0.00 0.00 2.83
3598 3736 7.890127 TCATCAATCCATCTTAAGTTTCCTGTT 59.110 33.333 1.63 0.00 0.00 3.16
3599 3737 7.405292 TCATCAATCCATCTTAAGTTTCCTGT 58.595 34.615 1.63 0.00 0.00 4.00
3600 3738 7.870509 TCATCAATCCATCTTAAGTTTCCTG 57.129 36.000 1.63 0.00 0.00 3.86
3601 3739 8.331740 TCTTCATCAATCCATCTTAAGTTTCCT 58.668 33.333 1.63 0.00 0.00 3.36
3602 3740 8.511604 TCTTCATCAATCCATCTTAAGTTTCC 57.488 34.615 1.63 0.00 0.00 3.13
3603 3741 9.171877 ACTCTTCATCAATCCATCTTAAGTTTC 57.828 33.333 1.63 0.00 0.00 2.78
3604 3742 8.954350 CACTCTTCATCAATCCATCTTAAGTTT 58.046 33.333 1.63 0.00 0.00 2.66
3605 3743 7.066766 GCACTCTTCATCAATCCATCTTAAGTT 59.933 37.037 1.63 0.00 0.00 2.66
3606 3744 6.541641 GCACTCTTCATCAATCCATCTTAAGT 59.458 38.462 1.63 0.00 0.00 2.24
3607 3745 6.292757 CGCACTCTTCATCAATCCATCTTAAG 60.293 42.308 0.00 0.00 0.00 1.85
3608 3746 5.525012 CGCACTCTTCATCAATCCATCTTAA 59.475 40.000 0.00 0.00 0.00 1.85
3609 3747 5.052481 CGCACTCTTCATCAATCCATCTTA 58.948 41.667 0.00 0.00 0.00 2.10
3610 3748 3.875727 CGCACTCTTCATCAATCCATCTT 59.124 43.478 0.00 0.00 0.00 2.40
3611 3749 3.464907 CGCACTCTTCATCAATCCATCT 58.535 45.455 0.00 0.00 0.00 2.90
3612 3750 2.032204 GCGCACTCTTCATCAATCCATC 60.032 50.000 0.30 0.00 0.00 3.51
3613 3751 1.945394 GCGCACTCTTCATCAATCCAT 59.055 47.619 0.30 0.00 0.00 3.41
3614 3752 1.065926 AGCGCACTCTTCATCAATCCA 60.066 47.619 11.47 0.00 0.00 3.41
3615 3753 1.329906 CAGCGCACTCTTCATCAATCC 59.670 52.381 11.47 0.00 0.00 3.01
3616 3754 2.274437 TCAGCGCACTCTTCATCAATC 58.726 47.619 11.47 0.00 0.00 2.67
3617 3755 2.391616 TCAGCGCACTCTTCATCAAT 57.608 45.000 11.47 0.00 0.00 2.57
3618 3756 2.391616 ATCAGCGCACTCTTCATCAA 57.608 45.000 11.47 0.00 0.00 2.57
3619 3757 3.525268 TTATCAGCGCACTCTTCATCA 57.475 42.857 11.47 0.00 0.00 3.07
3620 3758 3.186001 CCATTATCAGCGCACTCTTCATC 59.814 47.826 11.47 0.00 0.00 2.92
3621 3759 3.136763 CCATTATCAGCGCACTCTTCAT 58.863 45.455 11.47 0.00 0.00 2.57
3622 3760 2.168313 TCCATTATCAGCGCACTCTTCA 59.832 45.455 11.47 0.00 0.00 3.02
3623 3761 2.826428 TCCATTATCAGCGCACTCTTC 58.174 47.619 11.47 0.00 0.00 2.87
3624 3762 2.988010 TCCATTATCAGCGCACTCTT 57.012 45.000 11.47 0.00 0.00 2.85
3625 3763 2.988010 TTCCATTATCAGCGCACTCT 57.012 45.000 11.47 0.00 0.00 3.24
3626 3764 4.558538 AAATTCCATTATCAGCGCACTC 57.441 40.909 11.47 0.00 0.00 3.51
3627 3765 4.989279 AAAATTCCATTATCAGCGCACT 57.011 36.364 11.47 0.00 0.00 4.40
3628 3766 5.343249 AGAAAAATTCCATTATCAGCGCAC 58.657 37.500 11.47 0.00 0.00 5.34
3629 3767 5.581126 AGAAAAATTCCATTATCAGCGCA 57.419 34.783 11.47 0.00 0.00 6.09
3630 3768 6.531240 TCAAAGAAAAATTCCATTATCAGCGC 59.469 34.615 0.00 0.00 0.00 5.92
3631 3769 8.638685 ATCAAAGAAAAATTCCATTATCAGCG 57.361 30.769 0.00 0.00 0.00 5.18
3662 3800 7.327975 TCGGAGCATCTTAATCTTAAGTTTCA 58.672 34.615 1.63 0.00 40.69 2.69
3687 3825 2.242196 CCAGGTATTGTGGACATTCCCT 59.758 50.000 0.00 0.00 37.23 4.20
3688 3826 2.241176 TCCAGGTATTGTGGACATTCCC 59.759 50.000 0.00 0.00 39.28 3.97
3730 3879 8.470002 GCTTGATTAATGAACCTACAAAATCCT 58.530 33.333 0.00 0.00 31.37 3.24
3803 3952 1.350351 GGAGGGAGTATGATGCATGCT 59.650 52.381 20.33 4.11 39.36 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.