Multiple sequence alignment - TraesCS5B01G424900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G424900 chr5B 100.000 4203 0 0 945 5147 600933476 600929274 0.000000e+00 7762.0
1 TraesCS5B01G424900 chr5B 100.000 529 0 0 1 529 600934420 600933892 0.000000e+00 977.0
2 TraesCS5B01G424900 chr5B 83.765 425 56 7 2358 2778 523452294 523452709 1.740000e-104 390.0
3 TraesCS5B01G424900 chr5B 80.249 562 74 21 1497 2052 523451623 523452153 6.250000e-104 388.0
4 TraesCS5B01G424900 chr5B 81.967 122 13 2 2870 2982 523452756 523452877 1.530000e-15 95.3
5 TraesCS5B01G424900 chr5D 93.460 2156 79 25 945 3054 488226041 488223902 0.000000e+00 3144.0
6 TraesCS5B01G424900 chr5D 95.770 1513 46 6 3207 4719 488223881 488222387 0.000000e+00 2423.0
7 TraesCS5B01G424900 chr5D 94.253 174 9 1 4969 5141 488221509 488221336 1.100000e-66 265.0
8 TraesCS5B01G424900 chr5D 84.358 179 15 9 318 490 488226267 488226096 4.120000e-36 163.0
9 TraesCS5B01G424900 chr5D 91.919 99 4 3 4847 4942 488222345 488222248 8.990000e-28 135.0
10 TraesCS5B01G424900 chr5A 91.799 2134 86 32 945 3054 608968883 608966815 0.000000e+00 2889.0
11 TraesCS5B01G424900 chr5A 95.915 1322 39 6 3407 4719 608966483 608965168 0.000000e+00 2128.0
12 TraesCS5B01G424900 chr5A 81.306 444 71 9 1611 2052 278349525 278349958 2.950000e-92 350.0
13 TraesCS5B01G424900 chr5A 96.569 204 7 0 3207 3410 608966794 608966591 6.380000e-89 339.0
14 TraesCS5B01G424900 chr5A 94.220 173 10 0 4969 5141 608964419 608964247 1.100000e-66 265.0
15 TraesCS5B01G424900 chr5A 86.842 152 10 5 346 490 608969086 608968938 1.480000e-35 161.0
16 TraesCS5B01G424900 chr6A 81.906 619 92 14 1437 2050 534029161 534029764 5.950000e-139 505.0
17 TraesCS5B01G424900 chr6A 85.052 388 47 7 2372 2755 534029901 534030281 8.080000e-103 385.0
18 TraesCS5B01G424900 chr6A 84.746 118 10 4 2180 2291 534029789 534029904 1.510000e-20 111.0
19 TraesCS5B01G424900 chr2A 83.333 312 50 2 1519 1829 21340326 21340636 2.350000e-73 287.0
20 TraesCS5B01G424900 chr2A 96.970 99 3 0 3054 3152 68155921 68155823 3.190000e-37 167.0
21 TraesCS5B01G424900 chrUn 83.172 309 50 2 1525 1832 358266235 358265928 1.090000e-71 281.0
22 TraesCS5B01G424900 chr6B 95.238 105 5 0 3052 3156 288707978 288708082 3.190000e-37 167.0
23 TraesCS5B01G424900 chr4D 95.238 105 5 0 3052 3156 13198279 13198383 3.190000e-37 167.0
24 TraesCS5B01G424900 chr4D 93.519 108 7 0 3054 3161 177433302 177433195 1.480000e-35 161.0
25 TraesCS5B01G424900 chr7D 96.040 101 4 0 3055 3155 168579919 168580019 1.150000e-36 165.0
26 TraesCS5B01G424900 chr7D 90.244 123 8 4 3634 3756 613722926 613723044 1.920000e-34 158.0
27 TraesCS5B01G424900 chr1B 96.040 101 4 0 3055 3155 87934596 87934496 1.150000e-36 165.0
28 TraesCS5B01G424900 chr1A 94.340 106 5 1 3051 3156 77163584 77163688 1.480000e-35 161.0
29 TraesCS5B01G424900 chr1D 91.304 115 9 1 3055 3169 225943942 225944055 6.900000e-34 156.0
30 TraesCS5B01G424900 chr2B 88.800 125 11 3 3028 3151 338938233 338938355 3.210000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G424900 chr5B 600929274 600934420 5146 True 4369.500000 7762 100.000000 1 5147 2 chr5B.!!$R1 5146
1 TraesCS5B01G424900 chr5B 523451623 523452877 1254 False 291.100000 390 81.993667 1497 2982 3 chr5B.!!$F1 1485
2 TraesCS5B01G424900 chr5D 488221336 488226267 4931 True 1226.000000 3144 91.952000 318 5141 5 chr5D.!!$R1 4823
3 TraesCS5B01G424900 chr5A 608964247 608969086 4839 True 1156.400000 2889 93.069000 346 5141 5 chr5A.!!$R1 4795
4 TraesCS5B01G424900 chr6A 534029161 534030281 1120 False 333.666667 505 83.901333 1437 2755 3 chr6A.!!$F1 1318

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
310 311 0.031414 ACCCCCTACGATACTTGGCT 60.031 55.0 0.0 0.0 0.0 4.75 F
1163 1197 0.179000 GAATCCAGGTGCGTCTCCAT 59.821 55.0 0.0 0.0 0.0 3.41 F
3070 3167 0.042131 ACATACTCCCTCCGTCCCAA 59.958 55.0 0.0 0.0 0.0 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1190 1224 1.000843 ACTGATTCACGCACTAGCACA 59.999 47.619 0.00 0.00 42.27 4.57 R
3137 3234 0.896226 GCCATATACTCCCTCCGTCC 59.104 60.000 0.00 0.00 0.00 4.79 R
4967 5200 0.391661 ACAAGCCGGCAGACTACATG 60.392 55.000 31.54 15.34 0.00 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.760047 CCCGAGTGACAAGCCCGG 62.760 72.222 0.00 0.00 39.85 5.73
49 50 4.815108 GGATTTTCGGGCCGGGCT 62.815 66.667 28.80 6.40 0.00 5.19
50 51 3.209812 GATTTTCGGGCCGGGCTC 61.210 66.667 28.80 15.19 0.00 4.70
72 73 3.458163 CAAGCTGCCCATGCCCAG 61.458 66.667 0.00 6.50 36.33 4.45
73 74 4.772231 AAGCTGCCCATGCCCAGG 62.772 66.667 11.34 0.00 36.33 4.45
76 77 2.284112 CTGCCCATGCCCAGGTTT 60.284 61.111 3.62 0.00 36.33 3.27
77 78 1.000233 CTGCCCATGCCCAGGTTTA 60.000 57.895 3.62 0.00 36.33 2.01
78 79 1.000233 TGCCCATGCCCAGGTTTAG 60.000 57.895 0.00 0.00 36.33 1.85
79 80 1.000359 GCCCATGCCCAGGTTTAGT 60.000 57.895 0.00 0.00 0.00 2.24
80 81 1.322538 GCCCATGCCCAGGTTTAGTG 61.323 60.000 0.00 0.00 0.00 2.74
81 82 0.684153 CCCATGCCCAGGTTTAGTGG 60.684 60.000 0.00 0.00 34.52 4.00
82 83 1.322538 CCATGCCCAGGTTTAGTGGC 61.323 60.000 0.00 0.00 44.27 5.01
84 85 3.681473 GCCCAGGTTTAGTGGCAC 58.319 61.111 10.29 10.29 43.46 5.01
85 86 2.332654 GCCCAGGTTTAGTGGCACG 61.333 63.158 12.71 0.00 43.46 5.34
86 87 2.332654 CCCAGGTTTAGTGGCACGC 61.333 63.158 12.71 4.10 40.45 5.34
87 88 2.332654 CCAGGTTTAGTGGCACGCC 61.333 63.158 12.71 12.93 41.54 5.68
88 89 1.302511 CAGGTTTAGTGGCACGCCT 60.303 57.895 12.71 14.91 41.54 5.52
89 90 0.036765 CAGGTTTAGTGGCACGCCTA 60.037 55.000 19.70 3.84 41.54 3.93
90 91 0.249398 AGGTTTAGTGGCACGCCTAG 59.751 55.000 19.07 0.00 41.54 3.02
91 92 0.743345 GGTTTAGTGGCACGCCTAGG 60.743 60.000 12.71 3.67 41.54 3.02
92 93 0.248289 GTTTAGTGGCACGCCTAGGA 59.752 55.000 14.75 0.00 41.54 2.94
93 94 0.248289 TTTAGTGGCACGCCTAGGAC 59.752 55.000 14.75 2.72 41.54 3.85
94 95 0.901114 TTAGTGGCACGCCTAGGACA 60.901 55.000 14.75 0.00 41.54 4.02
95 96 0.686441 TAGTGGCACGCCTAGGACAT 60.686 55.000 14.75 0.00 41.54 3.06
96 97 1.078426 GTGGCACGCCTAGGACATT 60.078 57.895 14.75 0.00 36.94 2.71
97 98 1.090052 GTGGCACGCCTAGGACATTC 61.090 60.000 14.75 0.00 36.94 2.67
98 99 1.264749 TGGCACGCCTAGGACATTCT 61.265 55.000 14.75 0.00 36.94 2.40
99 100 0.107654 GGCACGCCTAGGACATTCTT 60.108 55.000 14.75 0.00 0.00 2.52
100 101 1.138266 GGCACGCCTAGGACATTCTTA 59.862 52.381 14.75 0.00 0.00 2.10
101 102 2.224305 GGCACGCCTAGGACATTCTTAT 60.224 50.000 14.75 0.00 0.00 1.73
102 103 2.802816 GCACGCCTAGGACATTCTTATG 59.197 50.000 14.75 0.00 37.79 1.90
103 104 2.802816 CACGCCTAGGACATTCTTATGC 59.197 50.000 14.75 0.00 35.03 3.14
104 105 2.061773 CGCCTAGGACATTCTTATGCG 58.938 52.381 14.75 0.00 36.94 4.73
105 106 2.417719 GCCTAGGACATTCTTATGCGG 58.582 52.381 14.75 0.00 35.03 5.69
106 107 2.037251 GCCTAGGACATTCTTATGCGGA 59.963 50.000 14.75 0.00 35.03 5.54
107 108 3.654414 CCTAGGACATTCTTATGCGGAC 58.346 50.000 1.05 0.00 35.03 4.79
108 109 2.622064 AGGACATTCTTATGCGGACC 57.378 50.000 0.00 0.00 35.03 4.46
109 110 2.119495 AGGACATTCTTATGCGGACCT 58.881 47.619 0.00 0.00 35.03 3.85
110 111 2.158900 AGGACATTCTTATGCGGACCTG 60.159 50.000 0.00 0.00 35.03 4.00
111 112 1.599542 GACATTCTTATGCGGACCTGC 59.400 52.381 1.90 1.90 35.03 4.85
112 113 0.947244 CATTCTTATGCGGACCTGCC 59.053 55.000 5.97 0.00 0.00 4.85
113 114 0.179018 ATTCTTATGCGGACCTGCCC 60.179 55.000 5.97 0.00 0.00 5.36
114 115 2.203209 CTTATGCGGACCTGCCCC 60.203 66.667 5.97 0.00 0.00 5.80
128 129 3.586454 CCCCGTCCCCCTGGTTTT 61.586 66.667 0.00 0.00 0.00 2.43
129 130 2.524044 CCCGTCCCCCTGGTTTTT 59.476 61.111 0.00 0.00 0.00 1.94
130 131 1.906333 CCCGTCCCCCTGGTTTTTG 60.906 63.158 0.00 0.00 0.00 2.44
131 132 1.906333 CCGTCCCCCTGGTTTTTGG 60.906 63.158 0.00 0.00 0.00 3.28
132 133 1.906333 CGTCCCCCTGGTTTTTGGG 60.906 63.158 0.00 0.00 42.98 4.12
136 137 3.310307 CCCTGGTTTTTGGGGGCG 61.310 66.667 0.00 0.00 39.76 6.13
137 138 3.310307 CCTGGTTTTTGGGGGCGG 61.310 66.667 0.00 0.00 0.00 6.13
138 139 4.002506 CTGGTTTTTGGGGGCGGC 62.003 66.667 0.00 0.00 0.00 6.53
141 142 4.002506 GTTTTTGGGGGCGGCCAG 62.003 66.667 30.95 0.00 0.00 4.85
153 154 3.958860 GGCCAGGAGGTGTGCAGT 61.959 66.667 0.00 0.00 37.19 4.40
154 155 2.113986 GCCAGGAGGTGTGCAGTT 59.886 61.111 0.00 0.00 37.19 3.16
155 156 1.374947 GCCAGGAGGTGTGCAGTTA 59.625 57.895 0.00 0.00 37.19 2.24
156 157 0.955919 GCCAGGAGGTGTGCAGTTAC 60.956 60.000 0.00 0.00 37.19 2.50
157 158 0.396435 CCAGGAGGTGTGCAGTTACA 59.604 55.000 0.00 0.00 0.00 2.41
166 167 2.701587 TGCAGTTACACAGGCACAC 58.298 52.632 0.00 0.00 0.00 3.82
167 168 0.817634 TGCAGTTACACAGGCACACC 60.818 55.000 0.00 0.00 0.00 4.16
181 182 2.913777 CACACCTGTGCTGATTCATG 57.086 50.000 0.00 0.00 39.39 3.07
182 183 1.135489 CACACCTGTGCTGATTCATGC 60.135 52.381 0.00 0.00 39.39 4.06
183 184 1.170442 CACCTGTGCTGATTCATGCA 58.830 50.000 0.00 0.00 36.79 3.96
184 185 1.749063 CACCTGTGCTGATTCATGCAT 59.251 47.619 11.98 0.00 41.45 3.96
185 186 1.749063 ACCTGTGCTGATTCATGCATG 59.251 47.619 21.07 21.07 41.45 4.06
186 187 1.536072 CCTGTGCTGATTCATGCATGC 60.536 52.381 22.25 11.82 41.45 4.06
187 188 1.134175 CTGTGCTGATTCATGCATGCA 59.866 47.619 25.04 25.04 41.45 3.96
188 189 1.556564 GTGCTGATTCATGCATGCAC 58.443 50.000 25.37 19.94 42.69 4.57
189 190 0.458260 TGCTGATTCATGCATGCACC 59.542 50.000 25.37 12.55 33.94 5.01
190 191 0.744874 GCTGATTCATGCATGCACCT 59.255 50.000 25.37 4.95 0.00 4.00
191 192 1.536072 GCTGATTCATGCATGCACCTG 60.536 52.381 25.37 18.85 0.00 4.00
192 193 2.021457 CTGATTCATGCATGCACCTGA 58.979 47.619 25.37 21.03 0.00 3.86
193 194 1.746787 TGATTCATGCATGCACCTGAC 59.253 47.619 25.37 13.02 0.00 3.51
194 195 1.066605 GATTCATGCATGCACCTGACC 59.933 52.381 25.37 13.70 0.00 4.02
195 196 0.038599 TTCATGCATGCACCTGACCT 59.961 50.000 25.37 1.29 0.00 3.85
196 197 0.678684 TCATGCATGCACCTGACCTG 60.679 55.000 25.37 15.68 0.00 4.00
197 198 0.678684 CATGCATGCACCTGACCTGA 60.679 55.000 25.37 0.00 0.00 3.86
198 199 0.393944 ATGCATGCACCTGACCTGAG 60.394 55.000 25.37 0.00 0.00 3.35
199 200 2.404995 GCATGCACCTGACCTGAGC 61.405 63.158 14.21 0.00 0.00 4.26
200 201 2.104859 CATGCACCTGACCTGAGCG 61.105 63.158 0.00 0.00 0.00 5.03
201 202 3.965539 ATGCACCTGACCTGAGCGC 62.966 63.158 0.00 0.00 0.00 5.92
205 206 4.504916 CCTGACCTGAGCGCCGAG 62.505 72.222 2.29 0.00 0.00 4.63
220 221 4.681978 GAGCCGGGTTGCACGTCT 62.682 66.667 8.00 0.00 0.00 4.18
221 222 4.988598 AGCCGGGTTGCACGTCTG 62.989 66.667 0.00 0.00 0.00 3.51
222 223 4.980805 GCCGGGTTGCACGTCTGA 62.981 66.667 2.18 0.00 0.00 3.27
223 224 3.041940 CCGGGTTGCACGTCTGAC 61.042 66.667 0.00 0.00 0.00 3.51
224 225 2.029073 CGGGTTGCACGTCTGACT 59.971 61.111 6.21 0.00 0.00 3.41
225 226 1.594293 CGGGTTGCACGTCTGACTT 60.594 57.895 6.21 0.00 0.00 3.01
226 227 1.157870 CGGGTTGCACGTCTGACTTT 61.158 55.000 6.21 0.00 0.00 2.66
227 228 0.307760 GGGTTGCACGTCTGACTTTG 59.692 55.000 6.21 4.26 0.00 2.77
228 229 0.317020 GGTTGCACGTCTGACTTTGC 60.317 55.000 18.94 18.94 35.45 3.68
229 230 0.654472 GTTGCACGTCTGACTTTGCG 60.654 55.000 19.84 5.23 37.82 4.85
230 231 0.808060 TTGCACGTCTGACTTTGCGA 60.808 50.000 19.84 17.06 37.82 5.10
231 232 0.808060 TGCACGTCTGACTTTGCGAA 60.808 50.000 19.84 6.88 37.82 4.70
232 233 0.111089 GCACGTCTGACTTTGCGAAG 60.111 55.000 12.41 12.41 38.87 3.79
245 246 2.402388 CGAAGCGATGCAAGCTGG 59.598 61.111 18.78 11.29 45.31 4.85
246 247 2.101770 GAAGCGATGCAAGCTGGC 59.898 61.111 18.78 5.99 45.31 4.85
247 248 3.407046 GAAGCGATGCAAGCTGGCC 62.407 63.158 18.78 0.00 45.31 5.36
268 269 4.308458 CCTTCACGGCCACCACGA 62.308 66.667 2.24 0.00 34.93 4.35
269 270 2.738521 CTTCACGGCCACCACGAG 60.739 66.667 2.24 0.00 34.93 4.18
270 271 4.308458 TTCACGGCCACCACGAGG 62.308 66.667 2.24 0.00 42.21 4.63
276 277 2.676471 GCCACCACGAGGCCATTT 60.676 61.111 5.01 0.00 46.50 2.32
277 278 2.700773 GCCACCACGAGGCCATTTC 61.701 63.158 5.01 0.00 46.50 2.17
278 279 1.303236 CCACCACGAGGCCATTTCA 60.303 57.895 5.01 0.00 39.06 2.69
279 280 0.893270 CCACCACGAGGCCATTTCAA 60.893 55.000 5.01 0.00 39.06 2.69
280 281 0.523072 CACCACGAGGCCATTTCAAG 59.477 55.000 5.01 0.00 39.06 3.02
281 282 1.244019 ACCACGAGGCCATTTCAAGC 61.244 55.000 5.01 0.00 39.06 4.01
282 283 1.243342 CCACGAGGCCATTTCAAGCA 61.243 55.000 5.01 0.00 0.00 3.91
283 284 0.169672 CACGAGGCCATTTCAAGCAG 59.830 55.000 5.01 0.00 0.00 4.24
284 285 1.138247 CGAGGCCATTTCAAGCAGC 59.862 57.895 5.01 0.00 0.00 5.25
285 286 1.514553 GAGGCCATTTCAAGCAGCC 59.485 57.895 5.01 0.00 44.20 4.85
286 287 1.228956 AGGCCATTTCAAGCAGCCA 60.229 52.632 5.01 0.00 46.35 4.75
287 288 1.079612 GGCCATTTCAAGCAGCCAC 60.080 57.895 0.00 0.00 43.32 5.01
288 289 1.444895 GCCATTTCAAGCAGCCACG 60.445 57.895 0.00 0.00 0.00 4.94
289 290 1.444895 CCATTTCAAGCAGCCACGC 60.445 57.895 0.00 0.00 0.00 5.34
290 291 1.286570 CATTTCAAGCAGCCACGCA 59.713 52.632 0.00 0.00 0.00 5.24
291 292 0.318869 CATTTCAAGCAGCCACGCAA 60.319 50.000 0.00 0.00 0.00 4.85
292 293 0.318955 ATTTCAAGCAGCCACGCAAC 60.319 50.000 0.00 0.00 0.00 4.17
293 294 2.348605 TTTCAAGCAGCCACGCAACC 62.349 55.000 0.00 0.00 0.00 3.77
294 295 4.347453 CAAGCAGCCACGCAACCC 62.347 66.667 0.00 0.00 0.00 4.11
298 299 4.028490 CAGCCACGCAACCCCCTA 62.028 66.667 0.00 0.00 0.00 3.53
299 300 4.029809 AGCCACGCAACCCCCTAC 62.030 66.667 0.00 0.00 0.00 3.18
301 302 3.697747 CCACGCAACCCCCTACGA 61.698 66.667 0.00 0.00 0.00 3.43
302 303 2.582436 CACGCAACCCCCTACGAT 59.418 61.111 0.00 0.00 0.00 3.73
303 304 1.678598 CCACGCAACCCCCTACGATA 61.679 60.000 0.00 0.00 0.00 2.92
304 305 0.529119 CACGCAACCCCCTACGATAC 60.529 60.000 0.00 0.00 0.00 2.24
305 306 0.685458 ACGCAACCCCCTACGATACT 60.685 55.000 0.00 0.00 0.00 2.12
306 307 0.462789 CGCAACCCCCTACGATACTT 59.537 55.000 0.00 0.00 0.00 2.24
307 308 1.805120 CGCAACCCCCTACGATACTTG 60.805 57.143 0.00 0.00 0.00 3.16
308 309 1.474498 GCAACCCCCTACGATACTTGG 60.474 57.143 0.00 0.00 0.00 3.61
309 310 0.835276 AACCCCCTACGATACTTGGC 59.165 55.000 0.00 0.00 0.00 4.52
310 311 0.031414 ACCCCCTACGATACTTGGCT 60.031 55.000 0.00 0.00 0.00 4.75
311 312 1.218704 ACCCCCTACGATACTTGGCTA 59.781 52.381 0.00 0.00 0.00 3.93
312 313 2.322658 CCCCCTACGATACTTGGCTAA 58.677 52.381 0.00 0.00 0.00 3.09
313 314 2.904434 CCCCCTACGATACTTGGCTAAT 59.096 50.000 0.00 0.00 0.00 1.73
314 315 3.056035 CCCCCTACGATACTTGGCTAATC 60.056 52.174 0.00 0.00 0.00 1.75
315 316 3.833070 CCCCTACGATACTTGGCTAATCT 59.167 47.826 0.00 0.00 0.00 2.40
316 317 5.014858 CCCCTACGATACTTGGCTAATCTA 58.985 45.833 0.00 0.00 0.00 1.98
324 325 8.516234 ACGATACTTGGCTAATCTACTAATCAG 58.484 37.037 0.00 0.00 0.00 2.90
327 328 9.815306 ATACTTGGCTAATCTACTAATCAGAGA 57.185 33.333 0.00 0.00 0.00 3.10
328 329 8.719645 ACTTGGCTAATCTACTAATCAGAGAT 57.280 34.615 0.00 0.00 0.00 2.75
331 332 7.241628 TGGCTAATCTACTAATCAGAGATCCA 58.758 38.462 0.00 0.00 0.00 3.41
339 340 6.656632 ACTAATCAGAGATCCAGCGATTAA 57.343 37.500 0.00 0.00 30.44 1.40
342 343 5.999205 ATCAGAGATCCAGCGATTAATCT 57.001 39.130 13.45 0.00 0.00 2.40
343 344 7.473735 AATCAGAGATCCAGCGATTAATCTA 57.526 36.000 13.45 0.00 0.00 1.98
344 345 6.901081 TCAGAGATCCAGCGATTAATCTAA 57.099 37.500 13.45 0.00 0.00 2.10
350 351 9.809096 GAGATCCAGCGATTAATCTAATAATCA 57.191 33.333 13.45 0.00 40.67 2.57
354 355 8.085909 TCCAGCGATTAATCTAATAATCAACGA 58.914 33.333 13.45 0.00 40.67 3.85
374 382 6.867662 ACGATCCAGAATAATTTAGGCAAG 57.132 37.500 0.00 0.00 0.00 4.01
387 395 1.076995 GGCAAGTTTAGGGGGCGAT 60.077 57.895 0.00 0.00 0.00 4.58
402 410 4.053295 GGGGCGATTGATGATTTGATTTG 58.947 43.478 0.00 0.00 0.00 2.32
403 411 4.053295 GGGCGATTGATGATTTGATTTGG 58.947 43.478 0.00 0.00 0.00 3.28
494 504 3.613661 CCTCAAGGGCTCTCTCTCT 57.386 57.895 0.00 0.00 0.00 3.10
495 505 1.402787 CCTCAAGGGCTCTCTCTCTC 58.597 60.000 0.00 0.00 0.00 3.20
496 506 1.063717 CCTCAAGGGCTCTCTCTCTCT 60.064 57.143 0.00 0.00 0.00 3.10
497 507 2.301346 CTCAAGGGCTCTCTCTCTCTC 58.699 57.143 0.00 0.00 0.00 3.20
498 508 1.922447 TCAAGGGCTCTCTCTCTCTCT 59.078 52.381 0.00 0.00 0.00 3.10
499 509 2.092429 TCAAGGGCTCTCTCTCTCTCTC 60.092 54.545 0.00 0.00 0.00 3.20
500 510 0.469917 AGGGCTCTCTCTCTCTCTCG 59.530 60.000 0.00 0.00 0.00 4.04
501 511 1.166531 GGGCTCTCTCTCTCTCTCGC 61.167 65.000 0.00 0.00 0.00 5.03
502 512 0.179045 GGCTCTCTCTCTCTCTCGCT 60.179 60.000 0.00 0.00 0.00 4.93
969 992 4.179599 CCCTCCTCCCCTCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
971 994 2.652113 CCTCCTCCCCTCTCCCCTT 61.652 68.421 0.00 0.00 0.00 3.95
986 1009 1.521681 CCTTCCTCGAACCATCCGC 60.522 63.158 0.00 0.00 0.00 5.54
1163 1197 0.179000 GAATCCAGGTGCGTCTCCAT 59.821 55.000 0.00 0.00 0.00 3.41
1190 1224 4.088762 CGCAGCGCCAATCGTGTT 62.089 61.111 2.29 0.00 41.07 3.32
1191 1225 2.502510 GCAGCGCCAATCGTGTTG 60.503 61.111 2.29 0.00 41.07 3.33
1192 1226 2.945984 CAGCGCCAATCGTGTTGT 59.054 55.556 2.29 0.00 41.07 3.32
1206 1240 1.531149 GTGTTGTGCTAGTGCGTGAAT 59.469 47.619 0.00 0.00 43.34 2.57
1263 1297 4.426112 GCTGCGGCTTTGGCTTCC 62.426 66.667 11.21 0.00 38.73 3.46
1275 1309 4.746702 GCTTTGGCTTCCTGCTATATGGTA 60.747 45.833 0.00 0.00 42.39 3.25
1309 1343 4.022762 ACAGATTAGCTAGTATCACCTGCG 60.023 45.833 7.91 0.00 0.00 5.18
1310 1344 4.216472 CAGATTAGCTAGTATCACCTGCGA 59.784 45.833 7.91 0.00 0.00 5.10
1344 1388 6.662234 ACTTGTACTGGTAGTAGTAGATGCAA 59.338 38.462 0.00 0.00 34.05 4.08
1399 1451 6.485830 TTGGTTGCAGAGATTAGCTAGTAT 57.514 37.500 0.00 0.00 0.00 2.12
1463 1515 8.063200 ACTAGTACATGCACATTCAGTAGTTA 57.937 34.615 0.00 0.00 0.00 2.24
1468 1520 7.686438 ACATGCACATTCAGTAGTTATTCAA 57.314 32.000 0.00 0.00 0.00 2.69
1563 1618 5.587289 TGCTGATTTCACCTTTTGTTACAC 58.413 37.500 0.00 0.00 0.00 2.90
1594 1649 0.601311 AACAGTCTCAGCTTCGGCAC 60.601 55.000 0.00 0.00 44.74 5.01
1706 1762 1.961277 CAAGGTTTCTGTCGCGCCT 60.961 57.895 0.00 0.00 0.00 5.52
1883 1942 1.460305 GGAGGGGCAGAGCTATGGA 60.460 63.158 10.92 0.00 0.00 3.41
1886 1945 1.003003 GAGGGGCAGAGCTATGGAATC 59.997 57.143 10.92 0.00 0.00 2.52
1923 1982 4.196193 CGTTTAGCCCATTCCATCACTTA 58.804 43.478 0.00 0.00 0.00 2.24
1970 2029 4.223032 TGAATACTGAACAGGGGACTCTTC 59.777 45.833 6.76 0.57 40.21 2.87
2144 2206 5.072329 TCAACCACTTTCTCTTTCATCCTCT 59.928 40.000 0.00 0.00 0.00 3.69
2317 2397 7.360946 GCTTTAGGTTAACTCAAGTACCACATG 60.361 40.741 5.42 0.00 33.79 3.21
2368 2448 8.531146 CCATGTTTTCACCATCTTTAGGTTAAT 58.469 33.333 0.00 0.00 37.23 1.40
2890 2975 7.715249 TGTGTAGGATGTAAATTAAGATGGAGC 59.285 37.037 0.00 0.00 0.00 4.70
2899 2984 5.559148 AATTAAGATGGAGCAGGGAGTAG 57.441 43.478 0.00 0.00 0.00 2.57
2982 3077 8.531982 AGTGTATGTTCTCAATAAGAGCAACTA 58.468 33.333 0.00 0.00 46.64 2.24
3017 3114 1.135915 CTTCTGACGCACTAGCCAGAT 59.864 52.381 0.00 0.00 38.35 2.90
3054 3151 5.957771 TTGTATCCAAGAGCCTCTTACAT 57.042 39.130 6.66 4.75 33.78 2.29
3055 3152 7.419057 CCTTTGTATCCAAGAGCCTCTTACATA 60.419 40.741 6.66 3.80 33.78 2.29
3056 3153 6.406692 TGTATCCAAGAGCCTCTTACATAC 57.593 41.667 19.20 19.20 33.78 2.39
3057 3154 6.136857 TGTATCCAAGAGCCTCTTACATACT 58.863 40.000 22.97 6.51 33.78 2.12
3058 3155 5.799827 ATCCAAGAGCCTCTTACATACTC 57.200 43.478 6.66 0.00 33.78 2.59
3059 3156 3.961408 TCCAAGAGCCTCTTACATACTCC 59.039 47.826 6.66 0.00 33.78 3.85
3060 3157 3.070302 CCAAGAGCCTCTTACATACTCCC 59.930 52.174 6.66 0.00 33.78 4.30
3061 3158 3.964031 CAAGAGCCTCTTACATACTCCCT 59.036 47.826 6.66 0.00 33.78 4.20
3062 3159 3.839778 AGAGCCTCTTACATACTCCCTC 58.160 50.000 0.00 0.00 0.00 4.30
3063 3160 2.894765 GAGCCTCTTACATACTCCCTCC 59.105 54.545 0.00 0.00 0.00 4.30
3064 3161 1.614413 GCCTCTTACATACTCCCTCCG 59.386 57.143 0.00 0.00 0.00 4.63
3065 3162 2.946785 CCTCTTACATACTCCCTCCGT 58.053 52.381 0.00 0.00 0.00 4.69
3066 3163 2.885894 CCTCTTACATACTCCCTCCGTC 59.114 54.545 0.00 0.00 0.00 4.79
3067 3164 2.885894 CTCTTACATACTCCCTCCGTCC 59.114 54.545 0.00 0.00 0.00 4.79
3068 3165 1.962100 CTTACATACTCCCTCCGTCCC 59.038 57.143 0.00 0.00 0.00 4.46
3069 3166 0.928505 TACATACTCCCTCCGTCCCA 59.071 55.000 0.00 0.00 0.00 4.37
3070 3167 0.042131 ACATACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
3071 3168 1.200519 CATACTCCCTCCGTCCCAAA 58.799 55.000 0.00 0.00 0.00 3.28
3072 3169 1.557832 CATACTCCCTCCGTCCCAAAA 59.442 52.381 0.00 0.00 0.00 2.44
3073 3170 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3074 3171 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3075 3172 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3076 3173 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3077 3174 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3078 3175 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3079 3176 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
3080 3177 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
3081 3178 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3082 3179 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
3083 3180 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
3084 3181 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3085 3182 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
3086 3183 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
3087 3184 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
3088 3185 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
3089 3186 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
3090 3187 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
3091 3188 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
3092 3189 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
3093 3190 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
3096 3193 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
3097 3194 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
3098 3195 6.163135 AGTGTCTCAACTTTGTACTAGCTT 57.837 37.500 0.00 0.00 0.00 3.74
3099 3196 6.583562 AGTGTCTCAACTTTGTACTAGCTTT 58.416 36.000 0.00 0.00 0.00 3.51
3100 3197 7.723324 AGTGTCTCAACTTTGTACTAGCTTTA 58.277 34.615 0.00 0.00 0.00 1.85
3101 3198 7.868415 AGTGTCTCAACTTTGTACTAGCTTTAG 59.132 37.037 0.00 0.00 0.00 1.85
3102 3199 7.652507 GTGTCTCAACTTTGTACTAGCTTTAGT 59.347 37.037 0.00 0.00 0.00 2.24
3103 3200 8.853126 TGTCTCAACTTTGTACTAGCTTTAGTA 58.147 33.333 0.00 0.00 0.00 1.82
3142 3239 8.459911 AGGTTAAGATAATTATTTTGGGACGG 57.540 34.615 10.67 0.00 0.00 4.79
3143 3240 8.276477 AGGTTAAGATAATTATTTTGGGACGGA 58.724 33.333 10.67 0.00 0.00 4.69
3144 3241 8.565416 GGTTAAGATAATTATTTTGGGACGGAG 58.435 37.037 10.67 0.00 0.00 4.63
3145 3242 8.565416 GTTAAGATAATTATTTTGGGACGGAGG 58.435 37.037 10.67 0.00 0.00 4.30
3146 3243 5.631119 AGATAATTATTTTGGGACGGAGGG 58.369 41.667 0.00 0.00 0.00 4.30
3147 3244 5.371472 AGATAATTATTTTGGGACGGAGGGA 59.629 40.000 0.00 0.00 0.00 4.20
3148 3245 3.577805 ATTATTTTGGGACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
3149 3246 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3150 3247 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3178 3275 5.090083 GCTATCGCTGACACTAATAGCTAC 58.910 45.833 0.00 0.00 40.89 3.58
3182 3279 4.036498 TCGCTGACACTAATAGCTACCTTC 59.964 45.833 0.00 0.00 35.36 3.46
3183 3280 4.036971 CGCTGACACTAATAGCTACCTTCT 59.963 45.833 0.00 0.00 35.36 2.85
3184 3281 5.450688 CGCTGACACTAATAGCTACCTTCTT 60.451 44.000 0.00 0.00 35.36 2.52
3185 3282 6.342111 GCTGACACTAATAGCTACCTTCTTT 58.658 40.000 0.00 0.00 34.70 2.52
3186 3283 6.477360 GCTGACACTAATAGCTACCTTCTTTC 59.523 42.308 0.00 0.00 34.70 2.62
3187 3284 7.631811 GCTGACACTAATAGCTACCTTCTTTCT 60.632 40.741 0.00 0.00 34.70 2.52
3188 3285 8.135382 TGACACTAATAGCTACCTTCTTTCTT 57.865 34.615 0.00 0.00 0.00 2.52
3189 3286 8.035394 TGACACTAATAGCTACCTTCTTTCTTG 58.965 37.037 0.00 0.00 0.00 3.02
3190 3287 8.135382 ACACTAATAGCTACCTTCTTTCTTGA 57.865 34.615 0.00 0.00 0.00 3.02
3191 3288 8.763601 ACACTAATAGCTACCTTCTTTCTTGAT 58.236 33.333 0.00 0.00 0.00 2.57
3192 3289 9.255304 CACTAATAGCTACCTTCTTTCTTGATC 57.745 37.037 0.00 0.00 0.00 2.92
3193 3290 8.982723 ACTAATAGCTACCTTCTTTCTTGATCA 58.017 33.333 0.00 0.00 0.00 2.92
3194 3291 9.823647 CTAATAGCTACCTTCTTTCTTGATCAA 57.176 33.333 8.12 8.12 0.00 2.57
3196 3293 9.520515 AATAGCTACCTTCTTTCTTGATCAAAA 57.479 29.630 9.88 0.94 0.00 2.44
3197 3294 7.823745 AGCTACCTTCTTTCTTGATCAAAAA 57.176 32.000 9.88 11.40 0.00 1.94
3198 3295 8.414629 AGCTACCTTCTTTCTTGATCAAAAAT 57.585 30.769 9.88 1.80 0.00 1.82
3199 3296 9.520515 AGCTACCTTCTTTCTTGATCAAAAATA 57.479 29.630 9.88 3.94 0.00 1.40
3258 3355 3.869912 GCTGCCAACTGGATCTGTTCTAA 60.870 47.826 0.00 0.00 37.39 2.10
3510 3718 5.008118 GCAAAATAATGCTCCTACCTGAGAC 59.992 44.000 0.00 0.00 43.06 3.36
3601 3809 2.424601 CCGCATGTTCATGGAAGATGTT 59.575 45.455 14.89 0.00 42.70 2.71
3746 3954 2.635427 GACCTCTTCCATCTCCATACCC 59.365 54.545 0.00 0.00 0.00 3.69
3747 3955 2.251338 ACCTCTTCCATCTCCATACCCT 59.749 50.000 0.00 0.00 0.00 4.34
3756 3964 4.164988 CCATCTCCATACCCTCTGTTTCTT 59.835 45.833 0.00 0.00 0.00 2.52
3781 3989 1.530323 ATCTTTACACACGCCCCAAC 58.470 50.000 0.00 0.00 0.00 3.77
3807 4015 5.581874 GCCATTTTGTTATTGACTTGGATGG 59.418 40.000 0.00 0.00 34.80 3.51
3909 4117 4.280174 AGGTTCGACAAAGCACTAAGTAGA 59.720 41.667 0.00 0.00 37.85 2.59
3931 4139 1.141657 AGCAGAAGAACAAGAGTGGCA 59.858 47.619 0.00 0.00 0.00 4.92
3999 4207 1.446618 CAAGCTTTTGGATGGCGGC 60.447 57.895 0.00 0.00 0.00 6.53
4104 4312 0.829333 GCTGGGATCAGAAGCTCTCA 59.171 55.000 0.00 0.00 43.49 3.27
4155 4363 5.451520 CGTTGAGGTTTACTAGGATCGGAAT 60.452 44.000 0.00 0.00 0.00 3.01
4156 4364 6.346896 GTTGAGGTTTACTAGGATCGGAATT 58.653 40.000 0.00 0.00 0.00 2.17
4161 4369 5.233689 GGTTTACTAGGATCGGAATTGTTCG 59.766 44.000 0.00 0.00 0.00 3.95
4163 4371 2.135933 CTAGGATCGGAATTGTTCGGC 58.864 52.381 0.00 0.00 0.00 5.54
4199 4407 0.244721 TGCTGTGAGACGATGTCAGG 59.755 55.000 0.00 0.00 34.60 3.86
4460 4677 9.591404 GTTATTCATTCAAATATTCAGAGAGCG 57.409 33.333 0.00 0.00 0.00 5.03
4658 4875 1.909700 TCCTTGCCCATTGAAGACAC 58.090 50.000 0.00 0.00 0.00 3.67
4719 4936 1.202110 CGAGGCAGCACATTCATGAAC 60.202 52.381 11.07 0.00 0.00 3.18
4720 4937 1.814394 GAGGCAGCACATTCATGAACA 59.186 47.619 11.07 0.00 0.00 3.18
4721 4938 2.229543 GAGGCAGCACATTCATGAACAA 59.770 45.455 11.07 0.00 0.00 2.83
4722 4939 2.829720 AGGCAGCACATTCATGAACAAT 59.170 40.909 11.07 0.00 0.00 2.71
4723 4940 2.927477 GGCAGCACATTCATGAACAATG 59.073 45.455 11.07 8.14 37.29 2.82
4724 4941 3.581755 GCAGCACATTCATGAACAATGT 58.418 40.909 11.07 8.84 43.80 2.71
4725 4942 3.991773 GCAGCACATTCATGAACAATGTT 59.008 39.130 11.07 0.00 41.58 2.71
4726 4943 5.162794 GCAGCACATTCATGAACAATGTTA 58.837 37.500 11.07 0.00 41.58 2.41
4727 4944 5.061311 GCAGCACATTCATGAACAATGTTAC 59.939 40.000 11.07 6.35 41.58 2.50
4728 4945 5.574055 CAGCACATTCATGAACAATGTTACC 59.426 40.000 11.07 3.08 41.58 2.85
4729 4946 5.243507 AGCACATTCATGAACAATGTTACCA 59.756 36.000 11.07 0.00 41.58 3.25
4730 4947 5.345741 GCACATTCATGAACAATGTTACCAC 59.654 40.000 11.07 0.00 41.58 4.16
4731 4948 6.445475 CACATTCATGAACAATGTTACCACA 58.555 36.000 11.07 0.00 41.58 4.17
4755 4972 5.243730 AGGAATCCAACACAAAATTCGACAT 59.756 36.000 0.61 0.00 0.00 3.06
4758 4975 4.532276 TCCAACACAAAATTCGACATTCG 58.468 39.130 0.00 0.00 42.10 3.34
4772 4989 6.190954 TCGACATTCGAACTCTTGAATAGA 57.809 37.500 0.00 0.00 46.90 1.98
4773 4990 6.258899 TCGACATTCGAACTCTTGAATAGAG 58.741 40.000 0.00 0.00 46.90 2.43
4785 5002 7.475771 CTCTTGAATAGAGGCTGTGAAATAC 57.524 40.000 0.00 0.00 45.61 1.89
4786 5003 7.187824 TCTTGAATAGAGGCTGTGAAATACT 57.812 36.000 0.00 0.00 0.00 2.12
4787 5004 7.268586 TCTTGAATAGAGGCTGTGAAATACTC 58.731 38.462 0.00 0.00 0.00 2.59
4788 5005 5.918608 TGAATAGAGGCTGTGAAATACTCC 58.081 41.667 0.00 0.00 0.00 3.85
4789 5006 2.969628 AGAGGCTGTGAAATACTCCG 57.030 50.000 0.00 0.00 0.00 4.63
4790 5007 2.180276 AGAGGCTGTGAAATACTCCGT 58.820 47.619 0.00 0.00 0.00 4.69
4791 5008 2.166664 AGAGGCTGTGAAATACTCCGTC 59.833 50.000 0.00 0.00 0.00 4.79
4792 5009 1.207329 AGGCTGTGAAATACTCCGTCC 59.793 52.381 0.00 0.00 0.00 4.79
4793 5010 1.066430 GGCTGTGAAATACTCCGTCCA 60.066 52.381 0.00 0.00 0.00 4.02
4794 5011 2.420129 GGCTGTGAAATACTCCGTCCAT 60.420 50.000 0.00 0.00 0.00 3.41
4795 5012 2.866762 GCTGTGAAATACTCCGTCCATC 59.133 50.000 0.00 0.00 0.00 3.51
4796 5013 3.458189 CTGTGAAATACTCCGTCCATCC 58.542 50.000 0.00 0.00 0.00 3.51
4797 5014 2.169769 TGTGAAATACTCCGTCCATCCC 59.830 50.000 0.00 0.00 0.00 3.85
4798 5015 2.169769 GTGAAATACTCCGTCCATCCCA 59.830 50.000 0.00 0.00 0.00 4.37
4799 5016 3.045634 TGAAATACTCCGTCCATCCCAT 58.954 45.455 0.00 0.00 0.00 4.00
4800 5017 4.039973 GTGAAATACTCCGTCCATCCCATA 59.960 45.833 0.00 0.00 0.00 2.74
4801 5018 4.656575 TGAAATACTCCGTCCATCCCATAA 59.343 41.667 0.00 0.00 0.00 1.90
4802 5019 5.309543 TGAAATACTCCGTCCATCCCATAAT 59.690 40.000 0.00 0.00 0.00 1.28
4803 5020 6.499000 TGAAATACTCCGTCCATCCCATAATA 59.501 38.462 0.00 0.00 0.00 0.98
4804 5021 7.182026 TGAAATACTCCGTCCATCCCATAATAT 59.818 37.037 0.00 0.00 0.00 1.28
4805 5022 8.618240 AAATACTCCGTCCATCCCATAATATA 57.382 34.615 0.00 0.00 0.00 0.86
4806 5023 8.798975 AATACTCCGTCCATCCCATAATATAT 57.201 34.615 0.00 0.00 0.00 0.86
4807 5024 6.485830 ACTCCGTCCATCCCATAATATATG 57.514 41.667 0.00 0.00 0.00 1.78
4808 5025 6.202331 ACTCCGTCCATCCCATAATATATGA 58.798 40.000 0.00 0.00 0.00 2.15
4809 5026 6.325028 ACTCCGTCCATCCCATAATATATGAG 59.675 42.308 0.00 0.00 0.00 2.90
4810 5027 6.440354 TCCGTCCATCCCATAATATATGAGA 58.560 40.000 0.00 0.00 0.00 3.27
4811 5028 6.323996 TCCGTCCATCCCATAATATATGAGAC 59.676 42.308 0.00 0.00 0.00 3.36
4812 5029 6.209361 CGTCCATCCCATAATATATGAGACG 58.791 44.000 0.00 0.00 37.05 4.18
4813 5030 6.516718 GTCCATCCCATAATATATGAGACGG 58.483 44.000 0.00 0.00 0.00 4.79
4814 5031 6.323996 GTCCATCCCATAATATATGAGACGGA 59.676 42.308 0.00 0.00 0.00 4.69
4815 5032 6.551227 TCCATCCCATAATATATGAGACGGAG 59.449 42.308 0.00 0.00 0.00 4.63
4816 5033 6.239430 CCATCCCATAATATATGAGACGGAGG 60.239 46.154 0.00 0.10 0.00 4.30
4817 5034 5.208890 TCCCATAATATATGAGACGGAGGG 58.791 45.833 0.00 0.00 0.00 4.30
4818 5035 5.043657 TCCCATAATATATGAGACGGAGGGA 60.044 44.000 0.00 0.00 38.05 4.20
4819 5036 5.841237 CCCATAATATATGAGACGGAGGGAT 59.159 44.000 0.00 0.00 33.23 3.85
4820 5037 6.327626 CCCATAATATATGAGACGGAGGGATT 59.672 42.308 0.00 0.00 33.23 3.01
4821 5038 7.509318 CCCATAATATATGAGACGGAGGGATTA 59.491 40.741 0.00 0.00 33.23 1.75
4822 5039 8.580720 CCATAATATATGAGACGGAGGGATTAG 58.419 40.741 0.00 0.00 0.00 1.73
4823 5040 6.472686 AATATATGAGACGGAGGGATTAGC 57.527 41.667 0.00 0.00 0.00 3.09
4824 5041 2.088104 ATGAGACGGAGGGATTAGCA 57.912 50.000 0.00 0.00 0.00 3.49
4825 5042 1.112113 TGAGACGGAGGGATTAGCAC 58.888 55.000 0.00 0.00 0.00 4.40
4826 5043 1.112113 GAGACGGAGGGATTAGCACA 58.888 55.000 0.00 0.00 0.00 4.57
4827 5044 1.689273 GAGACGGAGGGATTAGCACAT 59.311 52.381 0.00 0.00 0.00 3.21
4828 5045 2.891580 GAGACGGAGGGATTAGCACATA 59.108 50.000 0.00 0.00 0.00 2.29
4829 5046 3.511477 AGACGGAGGGATTAGCACATAT 58.489 45.455 0.00 0.00 0.00 1.78
4830 5047 3.904339 AGACGGAGGGATTAGCACATATT 59.096 43.478 0.00 0.00 0.00 1.28
4831 5048 5.084519 AGACGGAGGGATTAGCACATATTA 58.915 41.667 0.00 0.00 0.00 0.98
4832 5049 5.186021 AGACGGAGGGATTAGCACATATTAG 59.814 44.000 0.00 0.00 0.00 1.73
4833 5050 4.838986 ACGGAGGGATTAGCACATATTAGT 59.161 41.667 0.00 0.00 0.00 2.24
4834 5051 5.171476 CGGAGGGATTAGCACATATTAGTG 58.829 45.833 0.00 0.00 42.37 2.74
4869 5086 6.261826 GCTGATAAACTATTCATGCAAGAGGT 59.738 38.462 0.00 0.00 0.00 3.85
4870 5087 7.558161 TGATAAACTATTCATGCAAGAGGTG 57.442 36.000 0.00 0.00 0.00 4.00
4919 5138 8.850452 GCTTATTCATAAAAGGAAGTGAAAACG 58.150 33.333 0.00 0.00 34.62 3.60
4922 5141 2.882927 AAAAGGAAGTGAAAACGGGC 57.117 45.000 0.00 0.00 0.00 6.13
4924 5143 1.770294 AAGGAAGTGAAAACGGGCAA 58.230 45.000 0.00 0.00 0.00 4.52
4925 5144 1.318576 AGGAAGTGAAAACGGGCAAG 58.681 50.000 0.00 0.00 0.00 4.01
4926 5145 1.133915 AGGAAGTGAAAACGGGCAAGA 60.134 47.619 0.00 0.00 0.00 3.02
4927 5146 1.266989 GGAAGTGAAAACGGGCAAGAG 59.733 52.381 0.00 0.00 0.00 2.85
4975 5911 7.331193 ACGGAAGTGAAAACTATTCATGTAGTC 59.669 37.037 0.00 0.00 46.97 2.59
4998 5935 0.028770 CGGCTTGTTGCTTTTGTCGA 59.971 50.000 0.00 0.00 42.39 4.20
5041 5978 4.940046 GTGCTCATCAAATCTCTCCTGAAA 59.060 41.667 0.00 0.00 0.00 2.69
5059 5996 9.780413 CTCCTGAAAATCAAAGCTAAAATAGAC 57.220 33.333 0.00 0.00 0.00 2.59
5062 5999 8.970691 TGAAAATCAAAGCTAAAATAGACAGC 57.029 30.769 0.00 0.00 35.49 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 4.815108 AGCCCGGCCCGAAAATCC 62.815 66.667 3.71 0.00 0.00 3.01
33 34 3.209812 GAGCCCGGCCCGAAAATC 61.210 66.667 3.71 0.00 0.00 2.17
55 56 3.458163 CTGGGCATGGGCAGCTTG 61.458 66.667 0.00 0.00 43.71 4.01
56 57 4.772231 CCTGGGCATGGGCAGCTT 62.772 66.667 0.00 0.00 43.71 3.74
59 60 1.000233 TAAACCTGGGCATGGGCAG 60.000 57.895 0.00 0.00 43.71 4.85
60 61 1.000233 CTAAACCTGGGCATGGGCA 60.000 57.895 0.00 0.00 43.71 5.36
61 62 1.000359 ACTAAACCTGGGCATGGGC 60.000 57.895 0.00 0.00 40.13 5.36
62 63 0.684153 CCACTAAACCTGGGCATGGG 60.684 60.000 0.00 0.00 0.00 4.00
63 64 1.322538 GCCACTAAACCTGGGCATGG 61.323 60.000 0.00 0.00 45.70 3.66
64 65 2.192605 GCCACTAAACCTGGGCATG 58.807 57.895 0.00 0.00 45.70 4.06
65 66 4.764143 GCCACTAAACCTGGGCAT 57.236 55.556 0.00 0.00 45.70 4.40
67 68 2.332654 CGTGCCACTAAACCTGGGC 61.333 63.158 0.00 0.00 46.58 5.36
68 69 2.332654 GCGTGCCACTAAACCTGGG 61.333 63.158 0.00 0.00 0.00 4.45
69 70 2.332654 GGCGTGCCACTAAACCTGG 61.333 63.158 5.89 0.00 35.81 4.45
70 71 0.036765 TAGGCGTGCCACTAAACCTG 60.037 55.000 14.29 0.00 38.92 4.00
71 72 0.249398 CTAGGCGTGCCACTAAACCT 59.751 55.000 14.29 0.00 38.92 3.50
72 73 0.743345 CCTAGGCGTGCCACTAAACC 60.743 60.000 14.29 0.00 38.92 3.27
73 74 0.248289 TCCTAGGCGTGCCACTAAAC 59.752 55.000 14.29 0.00 38.92 2.01
74 75 0.248289 GTCCTAGGCGTGCCACTAAA 59.752 55.000 14.29 0.00 38.92 1.85
75 76 0.901114 TGTCCTAGGCGTGCCACTAA 60.901 55.000 14.29 0.00 38.92 2.24
76 77 0.686441 ATGTCCTAGGCGTGCCACTA 60.686 55.000 14.29 0.00 38.92 2.74
77 78 1.553690 AATGTCCTAGGCGTGCCACT 61.554 55.000 14.29 0.00 38.92 4.00
78 79 1.078426 AATGTCCTAGGCGTGCCAC 60.078 57.895 14.29 2.81 38.92 5.01
79 80 1.220749 GAATGTCCTAGGCGTGCCA 59.779 57.895 14.29 0.00 38.92 4.92
80 81 0.107654 AAGAATGTCCTAGGCGTGCC 60.108 55.000 2.96 1.67 0.00 5.01
81 82 2.596904 TAAGAATGTCCTAGGCGTGC 57.403 50.000 2.96 0.00 0.00 5.34
82 83 2.802816 GCATAAGAATGTCCTAGGCGTG 59.197 50.000 2.96 0.00 35.38 5.34
83 84 2.545952 CGCATAAGAATGTCCTAGGCGT 60.546 50.000 2.96 0.00 37.45 5.68
84 85 2.061773 CGCATAAGAATGTCCTAGGCG 58.938 52.381 2.96 0.00 35.38 5.52
85 86 2.037251 TCCGCATAAGAATGTCCTAGGC 59.963 50.000 2.96 0.00 35.38 3.93
86 87 3.555168 GGTCCGCATAAGAATGTCCTAGG 60.555 52.174 0.82 0.82 35.38 3.02
87 88 3.322254 AGGTCCGCATAAGAATGTCCTAG 59.678 47.826 0.00 0.00 35.38 3.02
88 89 3.069586 CAGGTCCGCATAAGAATGTCCTA 59.930 47.826 0.00 0.00 35.38 2.94
89 90 2.119495 AGGTCCGCATAAGAATGTCCT 58.881 47.619 0.00 0.00 35.38 3.85
90 91 2.213499 CAGGTCCGCATAAGAATGTCC 58.787 52.381 0.00 0.00 35.38 4.02
91 92 1.599542 GCAGGTCCGCATAAGAATGTC 59.400 52.381 1.46 0.00 35.38 3.06
92 93 1.668419 GCAGGTCCGCATAAGAATGT 58.332 50.000 1.46 0.00 35.38 2.71
93 94 0.947244 GGCAGGTCCGCATAAGAATG 59.053 55.000 7.78 0.00 36.09 2.67
94 95 0.179018 GGGCAGGTCCGCATAAGAAT 60.179 55.000 7.78 0.00 34.94 2.40
95 96 1.223487 GGGCAGGTCCGCATAAGAA 59.777 57.895 7.78 0.00 34.94 2.52
96 97 2.742116 GGGGCAGGTCCGCATAAGA 61.742 63.158 7.78 0.00 46.30 2.10
97 98 2.203209 GGGGCAGGTCCGCATAAG 60.203 66.667 7.78 0.00 46.30 1.73
111 112 3.154995 AAAAACCAGGGGGACGGGG 62.155 63.158 0.00 0.00 38.05 5.73
112 113 1.906333 CAAAAACCAGGGGGACGGG 60.906 63.158 0.00 0.00 38.05 5.28
113 114 1.906333 CCAAAAACCAGGGGGACGG 60.906 63.158 0.00 0.00 38.05 4.79
114 115 1.906333 CCCAAAAACCAGGGGGACG 60.906 63.158 0.00 0.00 43.57 4.79
115 116 4.208426 CCCAAAAACCAGGGGGAC 57.792 61.111 0.00 0.00 43.57 4.46
119 120 3.310307 CGCCCCCAAAAACCAGGG 61.310 66.667 0.00 0.00 45.04 4.45
120 121 3.310307 CCGCCCCCAAAAACCAGG 61.310 66.667 0.00 0.00 0.00 4.45
121 122 4.002506 GCCGCCCCCAAAAACCAG 62.003 66.667 0.00 0.00 0.00 4.00
124 125 4.002506 CTGGCCGCCCCCAAAAAC 62.003 66.667 7.03 0.00 33.73 2.43
136 137 2.124507 TAACTGCACACCTCCTGGCC 62.125 60.000 0.00 0.00 36.63 5.36
137 138 0.955919 GTAACTGCACACCTCCTGGC 60.956 60.000 0.00 0.00 36.63 4.85
138 139 0.396435 TGTAACTGCACACCTCCTGG 59.604 55.000 0.00 0.00 39.83 4.45
139 140 1.202639 TGTGTAACTGCACACCTCCTG 60.203 52.381 9.75 0.00 46.73 3.86
140 141 1.070758 CTGTGTAACTGCACACCTCCT 59.929 52.381 9.75 0.00 46.73 3.69
141 142 1.512926 CTGTGTAACTGCACACCTCC 58.487 55.000 9.75 0.00 46.73 4.30
142 143 1.512926 CCTGTGTAACTGCACACCTC 58.487 55.000 9.75 0.00 46.73 3.85
143 144 0.535102 GCCTGTGTAACTGCACACCT 60.535 55.000 9.75 0.00 46.73 4.00
144 145 0.817634 TGCCTGTGTAACTGCACACC 60.818 55.000 9.75 0.00 46.73 4.16
148 149 0.817634 GGTGTGCCTGTGTAACTGCA 60.818 55.000 0.00 0.00 41.63 4.41
149 150 0.535102 AGGTGTGCCTGTGTAACTGC 60.535 55.000 0.00 0.00 45.05 4.40
150 151 3.706055 AGGTGTGCCTGTGTAACTG 57.294 52.632 0.00 0.00 45.05 3.16
162 163 4.982269 ATGCATGAATCAGCACAGGTGTG 61.982 47.826 0.00 5.71 44.49 3.82
163 164 1.171308 GCATGAATCAGCACAGGTGT 58.829 50.000 0.00 0.00 32.43 4.16
164 165 1.170442 TGCATGAATCAGCACAGGTG 58.830 50.000 0.00 0.00 35.51 4.00
165 166 1.749063 CATGCATGAATCAGCACAGGT 59.251 47.619 22.59 0.00 44.49 4.00
166 167 1.536072 GCATGCATGAATCAGCACAGG 60.536 52.381 30.64 0.00 44.49 4.00
167 168 1.134175 TGCATGCATGAATCAGCACAG 59.866 47.619 30.64 0.00 44.49 3.66
168 169 1.178276 TGCATGCATGAATCAGCACA 58.822 45.000 30.64 12.71 44.49 4.57
169 170 1.556564 GTGCATGCATGAATCAGCAC 58.443 50.000 30.64 23.64 44.49 4.40
170 171 0.458260 GGTGCATGCATGAATCAGCA 59.542 50.000 30.64 16.63 45.92 4.41
171 172 0.744874 AGGTGCATGCATGAATCAGC 59.255 50.000 30.64 24.71 0.00 4.26
172 173 2.021457 TCAGGTGCATGCATGAATCAG 58.979 47.619 30.64 17.56 0.00 2.90
173 174 1.746787 GTCAGGTGCATGCATGAATCA 59.253 47.619 30.64 15.69 0.00 2.57
174 175 1.066605 GGTCAGGTGCATGCATGAATC 59.933 52.381 30.64 21.13 0.00 2.52
175 176 1.108776 GGTCAGGTGCATGCATGAAT 58.891 50.000 30.64 2.34 0.00 2.57
176 177 0.038599 AGGTCAGGTGCATGCATGAA 59.961 50.000 30.64 18.49 0.00 2.57
177 178 0.678684 CAGGTCAGGTGCATGCATGA 60.679 55.000 30.64 21.25 0.00 3.07
178 179 0.678684 TCAGGTCAGGTGCATGCATG 60.679 55.000 25.64 22.70 0.00 4.06
179 180 0.393944 CTCAGGTCAGGTGCATGCAT 60.394 55.000 25.64 5.67 0.00 3.96
180 181 1.002990 CTCAGGTCAGGTGCATGCA 60.003 57.895 18.46 18.46 0.00 3.96
181 182 2.404995 GCTCAGGTCAGGTGCATGC 61.405 63.158 11.82 11.82 0.00 4.06
182 183 2.104859 CGCTCAGGTCAGGTGCATG 61.105 63.158 0.00 0.00 0.00 4.06
183 184 2.267006 CGCTCAGGTCAGGTGCAT 59.733 61.111 0.00 0.00 0.00 3.96
184 185 4.687215 GCGCTCAGGTCAGGTGCA 62.687 66.667 0.00 0.00 36.61 4.57
188 189 4.504916 CTCGGCGCTCAGGTCAGG 62.505 72.222 7.64 0.00 0.00 3.86
203 204 4.681978 AGACGTGCAACCCGGCTC 62.682 66.667 0.00 0.00 40.29 4.70
204 205 4.988598 CAGACGTGCAACCCGGCT 62.989 66.667 0.00 0.00 46.66 5.52
205 206 4.980805 TCAGACGTGCAACCCGGC 62.981 66.667 0.00 0.00 0.00 6.13
206 207 2.989055 AAGTCAGACGTGCAACCCGG 62.989 60.000 0.00 0.00 0.00 5.73
207 208 1.157870 AAAGTCAGACGTGCAACCCG 61.158 55.000 0.00 0.00 0.00 5.28
208 209 0.307760 CAAAGTCAGACGTGCAACCC 59.692 55.000 0.00 0.00 0.00 4.11
209 210 0.317020 GCAAAGTCAGACGTGCAACC 60.317 55.000 21.20 0.00 35.17 3.77
210 211 0.654472 CGCAAAGTCAGACGTGCAAC 60.654 55.000 23.96 3.17 34.89 4.17
211 212 0.808060 TCGCAAAGTCAGACGTGCAA 60.808 50.000 23.96 10.00 34.89 4.08
212 213 0.808060 TTCGCAAAGTCAGACGTGCA 60.808 50.000 23.96 13.20 34.89 4.57
213 214 0.111089 CTTCGCAAAGTCAGACGTGC 60.111 55.000 17.86 17.86 32.85 5.34
214 215 0.111089 GCTTCGCAAAGTCAGACGTG 60.111 55.000 0.00 0.00 34.79 4.49
215 216 1.548973 CGCTTCGCAAAGTCAGACGT 61.549 55.000 0.00 0.00 34.79 4.34
216 217 1.128611 CGCTTCGCAAAGTCAGACG 59.871 57.895 0.00 0.00 34.79 4.18
217 218 1.071605 ATCGCTTCGCAAAGTCAGAC 58.928 50.000 0.00 0.00 34.79 3.51
218 219 1.070821 CATCGCTTCGCAAAGTCAGA 58.929 50.000 0.00 0.00 34.79 3.27
219 220 0.519999 GCATCGCTTCGCAAAGTCAG 60.520 55.000 0.00 0.00 34.79 3.51
220 221 1.227342 TGCATCGCTTCGCAAAGTCA 61.227 50.000 0.00 0.00 34.59 3.41
221 222 0.110238 TTGCATCGCTTCGCAAAGTC 60.110 50.000 0.00 0.00 44.71 3.01
222 223 0.110056 CTTGCATCGCTTCGCAAAGT 60.110 50.000 0.00 0.00 46.73 2.66
223 224 1.400990 GCTTGCATCGCTTCGCAAAG 61.401 55.000 0.00 0.00 46.73 2.77
224 225 1.442520 GCTTGCATCGCTTCGCAAA 60.443 52.632 0.00 0.00 46.73 3.68
225 226 2.176546 GCTTGCATCGCTTCGCAA 59.823 55.556 0.00 0.00 45.45 4.85
226 227 2.743538 AGCTTGCATCGCTTCGCA 60.744 55.556 5.28 0.00 32.98 5.10
227 228 2.277120 CAGCTTGCATCGCTTCGC 60.277 61.111 8.17 0.00 35.07 4.70
228 229 2.402388 CCAGCTTGCATCGCTTCG 59.598 61.111 8.17 0.00 35.07 3.79
229 230 2.101770 GCCAGCTTGCATCGCTTC 59.898 61.111 4.63 1.18 35.07 3.86
230 231 3.446570 GGCCAGCTTGCATCGCTT 61.447 61.111 12.41 0.00 35.07 4.68
251 252 4.308458 TCGTGGTGGCCGTGAAGG 62.308 66.667 0.00 0.00 44.97 3.46
252 253 2.738521 CTCGTGGTGGCCGTGAAG 60.739 66.667 0.00 0.00 0.00 3.02
253 254 4.308458 CCTCGTGGTGGCCGTGAA 62.308 66.667 0.00 0.00 0.00 3.18
260 261 0.893270 TTGAAATGGCCTCGTGGTGG 60.893 55.000 3.32 0.00 35.27 4.61
261 262 0.523072 CTTGAAATGGCCTCGTGGTG 59.477 55.000 3.32 0.00 35.27 4.17
262 263 1.244019 GCTTGAAATGGCCTCGTGGT 61.244 55.000 3.32 0.00 35.27 4.16
263 264 1.243342 TGCTTGAAATGGCCTCGTGG 61.243 55.000 3.32 0.00 0.00 4.94
264 265 0.169672 CTGCTTGAAATGGCCTCGTG 59.830 55.000 3.32 0.00 0.00 4.35
265 266 1.589716 GCTGCTTGAAATGGCCTCGT 61.590 55.000 3.32 0.00 0.00 4.18
266 267 1.138247 GCTGCTTGAAATGGCCTCG 59.862 57.895 3.32 0.00 0.00 4.63
267 268 1.252904 TGGCTGCTTGAAATGGCCTC 61.253 55.000 3.32 0.00 42.84 4.70
268 269 1.228956 TGGCTGCTTGAAATGGCCT 60.229 52.632 3.32 0.00 42.84 5.19
269 270 1.079612 GTGGCTGCTTGAAATGGCC 60.080 57.895 0.00 0.00 42.73 5.36
270 271 1.444895 CGTGGCTGCTTGAAATGGC 60.445 57.895 0.00 0.00 0.00 4.40
271 272 1.444895 GCGTGGCTGCTTGAAATGG 60.445 57.895 0.00 0.00 0.00 3.16
272 273 0.318869 TTGCGTGGCTGCTTGAAATG 60.319 50.000 0.00 0.00 35.36 2.32
273 274 0.318955 GTTGCGTGGCTGCTTGAAAT 60.319 50.000 0.00 0.00 35.36 2.17
274 275 1.065600 GTTGCGTGGCTGCTTGAAA 59.934 52.632 0.00 0.00 35.36 2.69
275 276 2.721231 GTTGCGTGGCTGCTTGAA 59.279 55.556 0.00 0.00 35.36 2.69
276 277 3.286751 GGTTGCGTGGCTGCTTGA 61.287 61.111 0.00 0.00 35.36 3.02
277 278 4.347453 GGGTTGCGTGGCTGCTTG 62.347 66.667 0.00 0.00 35.36 4.01
281 282 4.028490 TAGGGGGTTGCGTGGCTG 62.028 66.667 0.00 0.00 0.00 4.85
282 283 4.029809 GTAGGGGGTTGCGTGGCT 62.030 66.667 0.00 0.00 0.00 4.75
284 285 1.678598 TATCGTAGGGGGTTGCGTGG 61.679 60.000 0.00 0.00 0.00 4.94
285 286 0.529119 GTATCGTAGGGGGTTGCGTG 60.529 60.000 0.00 0.00 0.00 5.34
286 287 0.685458 AGTATCGTAGGGGGTTGCGT 60.685 55.000 0.00 0.00 0.00 5.24
287 288 0.462789 AAGTATCGTAGGGGGTTGCG 59.537 55.000 0.00 0.00 0.00 4.85
288 289 1.474498 CCAAGTATCGTAGGGGGTTGC 60.474 57.143 0.00 0.00 0.00 4.17
289 290 1.474498 GCCAAGTATCGTAGGGGGTTG 60.474 57.143 0.00 0.00 0.00 3.77
290 291 0.835276 GCCAAGTATCGTAGGGGGTT 59.165 55.000 0.00 0.00 0.00 4.11
291 292 0.031414 AGCCAAGTATCGTAGGGGGT 60.031 55.000 0.00 0.00 0.00 4.95
292 293 2.005370 TAGCCAAGTATCGTAGGGGG 57.995 55.000 0.00 0.00 0.00 5.40
293 294 3.833070 AGATTAGCCAAGTATCGTAGGGG 59.167 47.826 0.00 0.00 0.00 4.79
294 295 5.711036 AGTAGATTAGCCAAGTATCGTAGGG 59.289 44.000 0.00 0.00 0.00 3.53
295 296 6.821031 AGTAGATTAGCCAAGTATCGTAGG 57.179 41.667 0.00 0.00 0.00 3.18
296 297 9.991388 GATTAGTAGATTAGCCAAGTATCGTAG 57.009 37.037 0.00 0.00 0.00 3.51
297 298 9.511272 TGATTAGTAGATTAGCCAAGTATCGTA 57.489 33.333 0.00 0.00 0.00 3.43
298 299 8.405418 TGATTAGTAGATTAGCCAAGTATCGT 57.595 34.615 0.00 0.00 0.00 3.73
299 300 8.731605 TCTGATTAGTAGATTAGCCAAGTATCG 58.268 37.037 0.00 0.00 0.00 2.92
301 302 9.815306 TCTCTGATTAGTAGATTAGCCAAGTAT 57.185 33.333 0.00 0.00 0.00 2.12
302 303 9.815306 ATCTCTGATTAGTAGATTAGCCAAGTA 57.185 33.333 0.00 0.00 0.00 2.24
303 304 8.719645 ATCTCTGATTAGTAGATTAGCCAAGT 57.280 34.615 0.00 0.00 0.00 3.16
304 305 8.250332 GGATCTCTGATTAGTAGATTAGCCAAG 58.750 40.741 0.00 0.00 30.19 3.61
305 306 7.730332 TGGATCTCTGATTAGTAGATTAGCCAA 59.270 37.037 0.00 0.00 30.19 4.52
306 307 7.241628 TGGATCTCTGATTAGTAGATTAGCCA 58.758 38.462 0.00 0.00 30.19 4.75
307 308 7.630513 GCTGGATCTCTGATTAGTAGATTAGCC 60.631 44.444 15.76 8.94 35.93 3.93
308 309 7.257722 GCTGGATCTCTGATTAGTAGATTAGC 58.742 42.308 13.84 13.84 35.28 3.09
309 310 7.335673 TCGCTGGATCTCTGATTAGTAGATTAG 59.664 40.741 0.00 0.00 30.19 1.73
310 311 7.168905 TCGCTGGATCTCTGATTAGTAGATTA 58.831 38.462 0.00 0.00 30.19 1.75
311 312 6.007076 TCGCTGGATCTCTGATTAGTAGATT 58.993 40.000 0.00 0.00 30.19 2.40
312 313 5.565509 TCGCTGGATCTCTGATTAGTAGAT 58.434 41.667 0.00 0.00 32.70 1.98
313 314 4.974399 TCGCTGGATCTCTGATTAGTAGA 58.026 43.478 0.00 0.00 0.00 2.59
314 315 5.895636 ATCGCTGGATCTCTGATTAGTAG 57.104 43.478 0.00 0.00 0.00 2.57
315 316 7.761038 TTAATCGCTGGATCTCTGATTAGTA 57.239 36.000 0.00 0.00 34.20 1.82
316 317 6.656632 TTAATCGCTGGATCTCTGATTAGT 57.343 37.500 0.00 0.00 34.20 2.24
324 325 9.809096 TGATTATTAGATTAATCGCTGGATCTC 57.191 33.333 9.78 3.26 40.12 2.75
327 328 8.873830 CGTTGATTATTAGATTAATCGCTGGAT 58.126 33.333 9.78 3.60 40.12 3.41
328 329 8.085909 TCGTTGATTATTAGATTAATCGCTGGA 58.914 33.333 9.78 0.00 40.12 3.86
331 332 9.088512 GGATCGTTGATTATTAGATTAATCGCT 57.911 33.333 9.78 1.88 40.12 4.93
350 351 6.828785 ACTTGCCTAAATTATTCTGGATCGTT 59.171 34.615 1.39 0.00 0.00 3.85
354 355 9.136323 CCTAAACTTGCCTAAATTATTCTGGAT 57.864 33.333 1.39 0.00 0.00 3.41
370 375 0.455815 CAATCGCCCCCTAAACTTGC 59.544 55.000 0.00 0.00 0.00 4.01
374 382 2.341846 TCATCAATCGCCCCCTAAAC 57.658 50.000 0.00 0.00 0.00 2.01
387 395 6.266168 ACGCTAACCAAATCAAATCATCAA 57.734 33.333 0.00 0.00 0.00 2.57
485 495 1.414181 AGGAGCGAGAGAGAGAGAGAG 59.586 57.143 0.00 0.00 0.00 3.20
486 496 1.412710 GAGGAGCGAGAGAGAGAGAGA 59.587 57.143 0.00 0.00 0.00 3.10
487 497 1.541233 GGAGGAGCGAGAGAGAGAGAG 60.541 61.905 0.00 0.00 0.00 3.20
488 498 0.468226 GGAGGAGCGAGAGAGAGAGA 59.532 60.000 0.00 0.00 0.00 3.10
489 499 0.880278 CGGAGGAGCGAGAGAGAGAG 60.880 65.000 0.00 0.00 0.00 3.20
490 500 1.145156 CGGAGGAGCGAGAGAGAGA 59.855 63.158 0.00 0.00 0.00 3.10
491 501 3.731136 CGGAGGAGCGAGAGAGAG 58.269 66.667 0.00 0.00 0.00 3.20
969 992 1.521681 GGCGGATGGTTCGAGGAAG 60.522 63.158 0.00 0.00 0.00 3.46
971 994 3.467226 GGGCGGATGGTTCGAGGA 61.467 66.667 0.00 0.00 0.00 3.71
1064 1087 2.154427 GAAACGGTGAGAACACGGCG 62.154 60.000 4.80 4.80 46.47 6.46
1069 1092 1.343465 GAGAGGGAAACGGTGAGAACA 59.657 52.381 0.00 0.00 0.00 3.18
1136 1168 1.682849 CACCTGGATTCCGGAACCA 59.317 57.895 26.61 26.61 29.82 3.67
1137 1169 1.749258 GCACCTGGATTCCGGAACC 60.749 63.158 21.56 21.79 29.82 3.62
1139 1171 2.267642 CGCACCTGGATTCCGGAA 59.732 61.111 21.37 21.37 29.82 4.30
1163 1197 1.227438 GGCGCTGCGTAAAGGGATA 60.227 57.895 24.04 0.00 32.03 2.59
1190 1224 1.000843 ACTGATTCACGCACTAGCACA 59.999 47.619 0.00 0.00 42.27 4.57
1191 1225 1.391485 CACTGATTCACGCACTAGCAC 59.609 52.381 0.00 0.00 42.27 4.40
1192 1226 1.672737 CCACTGATTCACGCACTAGCA 60.673 52.381 0.00 0.00 42.27 3.49
1206 1240 1.271379 GCCTAAAACTGCTCCCACTGA 60.271 52.381 0.00 0.00 0.00 3.41
1263 1297 4.221482 TGCAGTCCAGATACCATATAGCAG 59.779 45.833 0.00 0.00 0.00 4.24
1309 1343 6.921914 ACTACCAGTACAAGTGTGTCTATTC 58.078 40.000 0.00 0.00 39.30 1.75
1310 1344 6.912951 ACTACCAGTACAAGTGTGTCTATT 57.087 37.500 0.00 0.00 39.30 1.73
1344 1388 5.292101 GCGCTGAAGAATTACTACTGAATGT 59.708 40.000 0.00 0.00 0.00 2.71
1426 1478 6.856938 GTGCATGTACTAGTACTGCTATGTAC 59.143 42.308 33.11 28.63 42.09 2.90
1427 1479 6.544564 TGTGCATGTACTAGTACTGCTATGTA 59.455 38.462 33.11 24.85 39.10 2.29
1439 1491 9.534565 AATAACTACTGAATGTGCATGTACTAG 57.465 33.333 15.25 9.30 0.00 2.57
1440 1492 9.529325 GAATAACTACTGAATGTGCATGTACTA 57.471 33.333 15.25 2.28 0.00 1.82
1463 1515 2.245582 AGCAAAGCAAGAGCCTTGAAT 58.754 42.857 16.28 4.00 43.34 2.57
1468 1520 1.101331 GCATAGCAAAGCAAGAGCCT 58.899 50.000 0.00 0.00 43.56 4.58
1563 1618 2.289882 TGAGACTGTTGATGCCCTGAAG 60.290 50.000 0.00 0.00 0.00 3.02
1594 1649 3.006339 CGGTGCCGATCCATGATTTGG 62.006 57.143 4.35 0.00 44.01 3.28
1886 1945 4.829858 GCTAAACGCTTACCGGAGGAATG 61.830 52.174 9.46 0.00 44.09 2.67
1923 1982 4.346418 ACAAGACAGAGGATGAAACTGAGT 59.654 41.667 0.00 0.00 35.85 3.41
2052 2114 8.978874 TCCTAGAATAAAATCAAGCAGCATAA 57.021 30.769 0.00 0.00 0.00 1.90
2144 2206 7.722363 TGTTCAGTATTCAGTAAGACAGACAA 58.278 34.615 0.00 0.00 28.90 3.18
2317 2397 4.033358 CGACAGGAAATGCTATGAACAGAC 59.967 45.833 0.00 0.00 0.00 3.51
2890 2975 1.839994 TGGAAGAATGGCTACTCCCTG 59.160 52.381 0.00 0.00 0.00 4.45
2899 2984 8.686334 TCTTTCTTAATGTTATGGAAGAATGGC 58.314 33.333 6.83 0.00 37.66 4.40
3054 3151 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3055 3152 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3056 3153 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3057 3154 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3058 3155 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
3059 3156 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3060 3157 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
3061 3158 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
3062 3159 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
3063 3160 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
3064 3161 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
3065 3162 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
3066 3163 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
3067 3164 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
3070 3167 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
3071 3168 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
3072 3169 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
3073 3170 7.286215 AGCTAGTACAAAGTTGAGACACTTA 57.714 36.000 0.00 0.00 35.87 2.24
3074 3171 6.163135 AGCTAGTACAAAGTTGAGACACTT 57.837 37.500 0.00 0.00 38.74 3.16
3075 3172 5.793030 AGCTAGTACAAAGTTGAGACACT 57.207 39.130 0.00 0.00 0.00 3.55
3076 3173 6.846325 AAAGCTAGTACAAAGTTGAGACAC 57.154 37.500 0.00 0.00 0.00 3.67
3077 3174 7.723324 ACTAAAGCTAGTACAAAGTTGAGACA 58.277 34.615 0.00 0.00 36.56 3.41
3116 3213 8.909923 CCGTCCCAAAATAATTATCTTAACCTT 58.090 33.333 0.00 0.00 0.00 3.50
3117 3214 8.276477 TCCGTCCCAAAATAATTATCTTAACCT 58.724 33.333 0.00 0.00 0.00 3.50
3118 3215 8.454570 TCCGTCCCAAAATAATTATCTTAACC 57.545 34.615 0.00 0.00 0.00 2.85
3119 3216 8.565416 CCTCCGTCCCAAAATAATTATCTTAAC 58.435 37.037 0.00 0.00 0.00 2.01
3120 3217 7.722285 CCCTCCGTCCCAAAATAATTATCTTAA 59.278 37.037 0.00 0.00 0.00 1.85
3121 3218 7.072708 TCCCTCCGTCCCAAAATAATTATCTTA 59.927 37.037 0.00 0.00 0.00 2.10
3122 3219 6.068670 CCCTCCGTCCCAAAATAATTATCTT 58.931 40.000 0.00 0.00 0.00 2.40
3123 3220 5.371472 TCCCTCCGTCCCAAAATAATTATCT 59.629 40.000 0.00 0.00 0.00 1.98
3124 3221 5.627135 TCCCTCCGTCCCAAAATAATTATC 58.373 41.667 0.00 0.00 0.00 1.75
3125 3222 5.133830 ACTCCCTCCGTCCCAAAATAATTAT 59.866 40.000 0.00 0.00 0.00 1.28
3126 3223 4.475747 ACTCCCTCCGTCCCAAAATAATTA 59.524 41.667 0.00 0.00 0.00 1.40
3127 3224 3.268595 ACTCCCTCCGTCCCAAAATAATT 59.731 43.478 0.00 0.00 0.00 1.40
3128 3225 2.850568 ACTCCCTCCGTCCCAAAATAAT 59.149 45.455 0.00 0.00 0.00 1.28
3129 3226 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3130 3227 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3131 3228 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3132 3229 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
3133 3230 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
3134 3231 2.605257 CATATACTCCCTCCGTCCCAA 58.395 52.381 0.00 0.00 0.00 4.12
3135 3232 1.203137 CCATATACTCCCTCCGTCCCA 60.203 57.143 0.00 0.00 0.00 4.37
3136 3233 1.558233 CCATATACTCCCTCCGTCCC 58.442 60.000 0.00 0.00 0.00 4.46
3137 3234 0.896226 GCCATATACTCCCTCCGTCC 59.104 60.000 0.00 0.00 0.00 4.79
3138 3235 1.926108 AGCCATATACTCCCTCCGTC 58.074 55.000 0.00 0.00 0.00 4.79
3139 3236 3.633418 GATAGCCATATACTCCCTCCGT 58.367 50.000 0.00 0.00 0.00 4.69
3140 3237 2.619177 CGATAGCCATATACTCCCTCCG 59.381 54.545 0.00 0.00 0.00 4.63
3201 3298 9.397280 GGACAGAAAGAAGGTAGCTATTTATTT 57.603 33.333 11.16 11.16 0.00 1.40
3202 3299 8.773216 AGGACAGAAAGAAGGTAGCTATTTATT 58.227 33.333 0.00 0.00 0.00 1.40
3203 3300 8.207545 CAGGACAGAAAGAAGGTAGCTATTTAT 58.792 37.037 0.00 0.00 0.00 1.40
3204 3301 7.556844 CAGGACAGAAAGAAGGTAGCTATTTA 58.443 38.462 0.00 0.00 0.00 1.40
3205 3302 6.410540 CAGGACAGAAAGAAGGTAGCTATTT 58.589 40.000 0.00 0.00 0.00 1.40
3206 3303 5.627968 GCAGGACAGAAAGAAGGTAGCTATT 60.628 44.000 0.00 0.00 0.00 1.73
3207 3304 4.141824 GCAGGACAGAAAGAAGGTAGCTAT 60.142 45.833 0.00 0.00 0.00 2.97
3208 3305 3.195825 GCAGGACAGAAAGAAGGTAGCTA 59.804 47.826 0.00 0.00 0.00 3.32
3209 3306 2.027653 GCAGGACAGAAAGAAGGTAGCT 60.028 50.000 0.00 0.00 0.00 3.32
3210 3307 2.027653 AGCAGGACAGAAAGAAGGTAGC 60.028 50.000 0.00 0.00 0.00 3.58
3211 3308 3.594134 CAGCAGGACAGAAAGAAGGTAG 58.406 50.000 0.00 0.00 0.00 3.18
3212 3309 2.303022 CCAGCAGGACAGAAAGAAGGTA 59.697 50.000 0.00 0.00 36.89 3.08
3213 3310 1.072965 CCAGCAGGACAGAAAGAAGGT 59.927 52.381 0.00 0.00 36.89 3.50
3214 3311 1.818642 CCAGCAGGACAGAAAGAAGG 58.181 55.000 0.00 0.00 36.89 3.46
3215 3312 1.163554 GCCAGCAGGACAGAAAGAAG 58.836 55.000 0.00 0.00 36.89 2.85
3216 3313 0.767375 AGCCAGCAGGACAGAAAGAA 59.233 50.000 0.00 0.00 36.89 2.52
3217 3314 0.035881 CAGCCAGCAGGACAGAAAGA 59.964 55.000 0.00 0.00 36.89 2.52
3323 3420 1.342174 AGCAGCACATTGTTTGAAGGG 59.658 47.619 0.00 0.00 0.00 3.95
3510 3718 4.585581 TGATATGGGTTGCATTTGGATCAG 59.414 41.667 0.00 0.00 0.00 2.90
3739 3947 9.853177 AGATAATAAAAGAAACAGAGGGTATGG 57.147 33.333 0.00 0.00 0.00 2.74
3756 3964 5.498393 TGGGGCGTGTGTAAAGATAATAAA 58.502 37.500 0.00 0.00 0.00 1.40
3773 3981 3.690280 AAAATGGCGGTTGGGGCG 61.690 61.111 0.00 0.00 34.76 6.13
3781 3989 3.925913 CCAAGTCAATAACAAAATGGCGG 59.074 43.478 0.00 0.00 0.00 6.13
3807 4015 2.159142 ACCCAATCTACGATGACGGAAC 60.159 50.000 0.00 0.00 44.46 3.62
3909 4117 2.549778 GCCACTCTTGTTCTTCTGCTCT 60.550 50.000 0.00 0.00 0.00 4.09
3931 4139 2.299013 TGTCCTGAACGTACATCTTGCT 59.701 45.455 0.00 0.00 0.00 3.91
3999 4207 1.995484 CCACAGAAGTAGATGTGTGCG 59.005 52.381 4.78 0.00 44.24 5.34
4101 4309 3.059051 GCTTGTTCTTCTTGAGCTGTGAG 60.059 47.826 0.00 0.00 0.00 3.51
4104 4312 2.923121 TGCTTGTTCTTCTTGAGCTGT 58.077 42.857 0.00 0.00 34.56 4.40
4155 4363 3.987868 GCGAATCATAGATAGCCGAACAA 59.012 43.478 0.00 0.00 0.00 2.83
4156 4364 3.255888 AGCGAATCATAGATAGCCGAACA 59.744 43.478 0.00 0.00 0.00 3.18
4161 4369 3.119173 AGCAGAGCGAATCATAGATAGCC 60.119 47.826 0.00 0.00 0.00 3.93
4163 4371 4.858140 CACAGCAGAGCGAATCATAGATAG 59.142 45.833 0.00 0.00 0.00 2.08
4199 4407 3.374745 CATGTGTGTGTTCTGCCTTTTC 58.625 45.455 0.00 0.00 0.00 2.29
4364 4573 3.436704 TGCTTAAATTCGGCTTCAGACAG 59.563 43.478 0.00 0.00 0.00 3.51
4457 4674 2.557056 ACGCACAGGATATGTATACGCT 59.443 45.455 0.00 0.00 41.41 5.07
4460 4677 6.675026 TGAAGTACGCACAGGATATGTATAC 58.325 40.000 0.00 0.00 41.41 1.47
4470 4687 5.991328 AAATATCATGAAGTACGCACAGG 57.009 39.130 0.00 0.00 0.00 4.00
4723 4940 3.482436 TGTGTTGGATTCCTGTGGTAAC 58.518 45.455 3.95 0.00 0.00 2.50
4724 4941 3.866703 TGTGTTGGATTCCTGTGGTAA 57.133 42.857 3.95 0.00 0.00 2.85
4725 4942 3.866703 TTGTGTTGGATTCCTGTGGTA 57.133 42.857 3.95 0.00 0.00 3.25
4726 4943 2.746279 TTGTGTTGGATTCCTGTGGT 57.254 45.000 3.95 0.00 0.00 4.16
4727 4944 4.605640 ATTTTGTGTTGGATTCCTGTGG 57.394 40.909 3.95 0.00 0.00 4.17
4728 4945 4.681025 CGAATTTTGTGTTGGATTCCTGTG 59.319 41.667 3.95 0.00 0.00 3.66
4729 4946 4.582656 TCGAATTTTGTGTTGGATTCCTGT 59.417 37.500 3.95 0.00 0.00 4.00
4730 4947 4.917415 GTCGAATTTTGTGTTGGATTCCTG 59.083 41.667 3.95 0.00 0.00 3.86
4731 4948 4.582656 TGTCGAATTTTGTGTTGGATTCCT 59.417 37.500 3.95 0.00 0.00 3.36
4765 4982 5.451937 CGGAGTATTTCACAGCCTCTATTCA 60.452 44.000 0.00 0.00 0.00 2.57
4769 4986 3.362706 ACGGAGTATTTCACAGCCTCTA 58.637 45.455 0.00 0.00 41.94 2.43
4770 4987 2.180276 ACGGAGTATTTCACAGCCTCT 58.820 47.619 0.00 0.00 41.94 3.69
4771 4988 2.674796 ACGGAGTATTTCACAGCCTC 57.325 50.000 0.00 0.00 41.94 4.70
4785 5002 6.551227 TCTCATATATTATGGGATGGACGGAG 59.449 42.308 0.00 0.00 0.00 4.63
4786 5003 6.323996 GTCTCATATATTATGGGATGGACGGA 59.676 42.308 0.71 0.00 30.34 4.69
4787 5004 6.516718 GTCTCATATATTATGGGATGGACGG 58.483 44.000 0.71 0.00 30.34 4.79
4788 5005 6.209361 CGTCTCATATATTATGGGATGGACG 58.791 44.000 8.22 0.00 37.03 4.79
4792 5009 6.239430 CCCTCCGTCTCATATATTATGGGATG 60.239 46.154 8.90 8.90 35.76 3.51
4793 5010 5.841237 CCCTCCGTCTCATATATTATGGGAT 59.159 44.000 0.71 0.00 30.34 3.85
4794 5011 5.043657 TCCCTCCGTCTCATATATTATGGGA 60.044 44.000 0.00 0.00 36.62 4.37
4795 5012 5.208890 TCCCTCCGTCTCATATATTATGGG 58.791 45.833 0.00 0.00 0.00 4.00
4796 5013 6.985653 ATCCCTCCGTCTCATATATTATGG 57.014 41.667 0.00 0.00 0.00 2.74
4797 5014 8.085296 GCTAATCCCTCCGTCTCATATATTATG 58.915 40.741 0.00 0.00 0.00 1.90
4798 5015 7.785028 TGCTAATCCCTCCGTCTCATATATTAT 59.215 37.037 0.00 0.00 0.00 1.28
4799 5016 7.068348 GTGCTAATCCCTCCGTCTCATATATTA 59.932 40.741 0.00 0.00 0.00 0.98
4800 5017 5.958380 TGCTAATCCCTCCGTCTCATATATT 59.042 40.000 0.00 0.00 0.00 1.28
4801 5018 5.361285 GTGCTAATCCCTCCGTCTCATATAT 59.639 44.000 0.00 0.00 0.00 0.86
4802 5019 4.705507 GTGCTAATCCCTCCGTCTCATATA 59.294 45.833 0.00 0.00 0.00 0.86
4803 5020 3.511934 GTGCTAATCCCTCCGTCTCATAT 59.488 47.826 0.00 0.00 0.00 1.78
4804 5021 2.891580 GTGCTAATCCCTCCGTCTCATA 59.108 50.000 0.00 0.00 0.00 2.15
4805 5022 1.689273 GTGCTAATCCCTCCGTCTCAT 59.311 52.381 0.00 0.00 0.00 2.90
4806 5023 1.112113 GTGCTAATCCCTCCGTCTCA 58.888 55.000 0.00 0.00 0.00 3.27
4807 5024 1.112113 TGTGCTAATCCCTCCGTCTC 58.888 55.000 0.00 0.00 0.00 3.36
4808 5025 1.794714 ATGTGCTAATCCCTCCGTCT 58.205 50.000 0.00 0.00 0.00 4.18
4809 5026 3.963428 ATATGTGCTAATCCCTCCGTC 57.037 47.619 0.00 0.00 0.00 4.79
4810 5027 4.838986 ACTAATATGTGCTAATCCCTCCGT 59.161 41.667 0.00 0.00 0.00 4.69
4811 5028 5.171476 CACTAATATGTGCTAATCCCTCCG 58.829 45.833 0.00 0.00 0.00 4.63
4835 5052 6.513180 TGAATAGTTTATCAGCCTCGTTAGG 58.487 40.000 0.00 0.00 46.76 2.69
4836 5053 7.359598 GCATGAATAGTTTATCAGCCTCGTTAG 60.360 40.741 0.00 0.00 0.00 2.34
4837 5054 6.423905 GCATGAATAGTTTATCAGCCTCGTTA 59.576 38.462 0.00 0.00 0.00 3.18
4838 5055 5.237344 GCATGAATAGTTTATCAGCCTCGTT 59.763 40.000 0.00 0.00 0.00 3.85
4839 5056 4.752101 GCATGAATAGTTTATCAGCCTCGT 59.248 41.667 0.00 0.00 0.00 4.18
4840 5057 4.751600 TGCATGAATAGTTTATCAGCCTCG 59.248 41.667 0.00 0.00 0.00 4.63
4841 5058 6.484643 TCTTGCATGAATAGTTTATCAGCCTC 59.515 38.462 0.00 0.00 0.00 4.70
4842 5059 6.359804 TCTTGCATGAATAGTTTATCAGCCT 58.640 36.000 0.00 0.00 0.00 4.58
4843 5060 6.293845 CCTCTTGCATGAATAGTTTATCAGCC 60.294 42.308 0.00 0.00 0.00 4.85
4844 5061 6.261826 ACCTCTTGCATGAATAGTTTATCAGC 59.738 38.462 0.00 0.00 0.00 4.26
4845 5062 7.281774 ACACCTCTTGCATGAATAGTTTATCAG 59.718 37.037 0.00 0.00 0.00 2.90
4846 5063 7.112122 ACACCTCTTGCATGAATAGTTTATCA 58.888 34.615 0.00 0.00 0.00 2.15
4847 5064 7.559590 ACACCTCTTGCATGAATAGTTTATC 57.440 36.000 0.00 0.00 0.00 1.75
4849 5066 9.542462 GTATACACCTCTTGCATGAATAGTTTA 57.458 33.333 0.00 0.90 0.00 2.01
4850 5067 8.046708 TGTATACACCTCTTGCATGAATAGTTT 58.953 33.333 0.08 1.37 0.00 2.66
4851 5068 7.564793 TGTATACACCTCTTGCATGAATAGTT 58.435 34.615 0.08 0.00 0.00 2.24
4852 5069 7.069950 TCTGTATACACCTCTTGCATGAATAGT 59.930 37.037 0.08 5.06 0.00 2.12
4853 5070 7.436933 TCTGTATACACCTCTTGCATGAATAG 58.563 38.462 0.08 0.00 0.00 1.73
4854 5071 7.360113 TCTGTATACACCTCTTGCATGAATA 57.640 36.000 0.08 0.00 0.00 1.75
4855 5072 6.239217 TCTGTATACACCTCTTGCATGAAT 57.761 37.500 0.08 0.00 0.00 2.57
4869 5086 8.523658 AGCTTCGCTGAATTATATCTGTATACA 58.476 33.333 5.25 5.25 37.57 2.29
4870 5087 8.918961 AGCTTCGCTGAATTATATCTGTATAC 57.081 34.615 0.00 0.00 37.57 1.47
4947 5180 5.181245 ACATGAATAGTTTTCACTTCCGTGG 59.819 40.000 0.00 0.00 41.53 4.94
4951 5184 8.660373 CAGACTACATGAATAGTTTTCACTTCC 58.340 37.037 0.00 0.00 35.48 3.46
4952 5185 8.171840 GCAGACTACATGAATAGTTTTCACTTC 58.828 37.037 0.00 0.00 35.48 3.01
4956 5189 5.580691 CGGCAGACTACATGAATAGTTTTCA 59.419 40.000 0.00 0.00 35.48 2.69
4957 5190 5.006746 CCGGCAGACTACATGAATAGTTTTC 59.993 44.000 0.00 0.00 35.48 2.29
4958 5191 4.876107 CCGGCAGACTACATGAATAGTTTT 59.124 41.667 0.00 0.00 35.48 2.43
4959 5192 4.442706 CCGGCAGACTACATGAATAGTTT 58.557 43.478 0.00 0.00 35.48 2.66
4961 5194 2.224066 GCCGGCAGACTACATGAATAGT 60.224 50.000 24.80 0.00 38.13 2.12
4962 5195 2.036475 AGCCGGCAGACTACATGAATAG 59.964 50.000 31.54 0.00 0.00 1.73
4963 5196 2.039418 AGCCGGCAGACTACATGAATA 58.961 47.619 31.54 0.00 0.00 1.75
4964 5197 0.833287 AGCCGGCAGACTACATGAAT 59.167 50.000 31.54 0.00 0.00 2.57
4965 5198 0.613260 AAGCCGGCAGACTACATGAA 59.387 50.000 31.54 0.00 0.00 2.57
4967 5200 0.391661 ACAAGCCGGCAGACTACATG 60.392 55.000 31.54 15.34 0.00 3.21
4998 5935 3.110705 ACATTGAGGCCTACTGTCTCAT 58.889 45.455 4.42 0.00 37.38 2.90
5041 5978 6.371548 TGACGCTGTCTATTTTAGCTTTGATT 59.628 34.615 0.00 0.00 35.36 2.57
5059 5996 0.518636 CTCCATTTGTGGTGACGCTG 59.481 55.000 0.00 0.00 42.82 5.18
5062 5999 0.960364 CCCCTCCATTTGTGGTGACG 60.960 60.000 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.