Multiple sequence alignment - TraesCS5B01G422000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G422000 chr5B 100.000 6200 0 0 342 6541 597217513 597223712 0.000000e+00 11450.0
1 TraesCS5B01G422000 chr5B 84.946 651 39 18 5904 6503 681384872 681384230 7.250000e-169 604.0
2 TraesCS5B01G422000 chr5B 100.000 140 0 0 1 140 597217172 597217311 6.510000e-65 259.0
3 TraesCS5B01G422000 chr5B 76.271 354 52 26 5892 6231 37978495 37978830 6.790000e-35 159.0
4 TraesCS5B01G422000 chr5D 89.734 5221 316 108 342 5471 486165714 486170805 0.000000e+00 6469.0
5 TraesCS5B01G422000 chr5D 87.861 346 28 8 6138 6475 480969224 480969563 1.710000e-105 394.0
6 TraesCS5B01G422000 chr5D 84.091 308 28 10 5508 5811 486170929 486171219 1.800000e-70 278.0
7 TraesCS5B01G422000 chr5A 92.061 2557 126 30 1545 4073 606893271 606895778 0.000000e+00 3526.0
8 TraesCS5B01G422000 chr5A 86.686 1750 131 44 4072 5761 606900377 606902084 0.000000e+00 1847.0
9 TraesCS5B01G422000 chr5A 79.479 1189 126 55 352 1483 606892118 606893245 0.000000e+00 736.0
10 TraesCS5B01G422000 chr5A 82.149 577 54 29 5906 6439 706823847 706823277 3.600000e-122 449.0
11 TraesCS5B01G422000 chr5A 94.318 88 5 0 1 88 606891484 606891571 1.140000e-27 135.0
12 TraesCS5B01G422000 chr2B 86.697 669 36 15 5904 6530 729774745 729775402 0.000000e+00 693.0
13 TraesCS5B01G422000 chr2B 84.236 628 41 17 5904 6476 493519041 493519665 5.730000e-155 558.0
14 TraesCS5B01G422000 chr2B 81.169 616 83 26 5903 6503 647431746 647431149 1.280000e-126 464.0
15 TraesCS5B01G422000 chr2B 81.517 211 18 9 5904 6101 4779888 4779686 3.160000e-33 154.0
16 TraesCS5B01G422000 chr4B 86.392 632 49 7 5904 6503 577666788 577666162 0.000000e+00 656.0
17 TraesCS5B01G422000 chr4B 88.269 520 49 6 3277 3786 582296939 582297456 4.340000e-171 612.0
18 TraesCS5B01G422000 chr4B 84.810 79 2 1 5838 5906 667459395 667459473 3.270000e-08 71.3
19 TraesCS5B01G422000 chr7B 86.477 599 50 11 5906 6487 88558240 88557656 4.300000e-176 628.0
20 TraesCS5B01G422000 chr7B 86.076 79 1 2 5838 5906 636613164 636613242 7.030000e-10 76.8
21 TraesCS5B01G422000 chr3B 86.201 616 36 11 5904 6476 749989893 749989284 7.200000e-174 621.0
22 TraesCS5B01G422000 chr3B 83.022 642 62 21 5904 6502 666797581 666796944 7.460000e-149 538.0
23 TraesCS5B01G422000 chr3B 93.939 99 4 2 5508 5605 657780536 657780633 1.470000e-31 148.0
24 TraesCS5B01G422000 chr6B 85.572 603 49 22 5906 6475 668974472 668973875 1.210000e-166 597.0
25 TraesCS5B01G422000 chr6B 83.094 627 50 14 5900 6475 198976644 198976023 2.700000e-143 520.0
26 TraesCS5B01G422000 chr6B 97.436 39 1 0 6491 6529 573989917 573989955 4.230000e-07 67.6
27 TraesCS5B01G422000 chr7D 90.024 421 35 3 2945 3361 578984474 578984891 7.460000e-149 538.0
28 TraesCS5B01G422000 chr7D 80.651 584 57 30 5900 6448 472735069 472734507 1.020000e-107 401.0
29 TraesCS5B01G422000 chr1B 83.251 609 58 19 5904 6476 511977566 511976966 2.700000e-143 520.0
30 TraesCS5B01G422000 chr1B 83.488 539 39 28 5933 6449 39592187 39592697 2.150000e-124 457.0
31 TraesCS5B01G422000 chr1D 80.245 572 71 23 5906 6448 479438799 479439357 6.150000e-105 392.0
32 TraesCS5B01G422000 chr1D 78.873 568 55 29 5933 6475 7921607 7922134 2.270000e-84 324.0
33 TraesCS5B01G422000 chr1D 87.037 162 19 2 5901 6060 259538231 259538392 1.450000e-41 182.0
34 TraesCS5B01G422000 chr1D 94.118 34 2 0 492 525 297380804 297380837 1.200000e-02 52.8
35 TraesCS5B01G422000 chr2A 77.393 491 49 26 5894 6330 72605960 72606442 1.100000e-57 235.0
36 TraesCS5B01G422000 chr3A 94.949 99 5 0 5508 5606 744380751 744380653 8.780000e-34 156.0
37 TraesCS5B01G422000 chr3A 93.814 97 2 2 5508 5604 728885025 728884933 6.840000e-30 143.0
38 TraesCS5B01G422000 chr1A 94.845 97 3 2 5508 5602 554300606 554300510 4.090000e-32 150.0
39 TraesCS5B01G422000 chr1A 93.939 99 4 2 5508 5604 554279347 554279445 1.470000e-31 148.0
40 TraesCS5B01G422000 chr1A 93.939 99 4 2 5508 5604 554294346 554294248 1.470000e-31 148.0
41 TraesCS5B01G422000 chr3D 94.000 100 2 2 5508 5604 610184392 610184294 1.470000e-31 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G422000 chr5B 597217172 597223712 6540 False 5854.500000 11450 100.000000 1 6541 2 chr5B.!!$F2 6540
1 TraesCS5B01G422000 chr5B 681384230 681384872 642 True 604.000000 604 84.946000 5904 6503 1 chr5B.!!$R1 599
2 TraesCS5B01G422000 chr5D 486165714 486171219 5505 False 3373.500000 6469 86.912500 342 5811 2 chr5D.!!$F2 5469
3 TraesCS5B01G422000 chr5A 606900377 606902084 1707 False 1847.000000 1847 86.686000 4072 5761 1 chr5A.!!$F1 1689
4 TraesCS5B01G422000 chr5A 606891484 606895778 4294 False 1465.666667 3526 88.619333 1 4073 3 chr5A.!!$F2 4072
5 TraesCS5B01G422000 chr5A 706823277 706823847 570 True 449.000000 449 82.149000 5906 6439 1 chr5A.!!$R1 533
6 TraesCS5B01G422000 chr2B 729774745 729775402 657 False 693.000000 693 86.697000 5904 6530 1 chr2B.!!$F2 626
7 TraesCS5B01G422000 chr2B 493519041 493519665 624 False 558.000000 558 84.236000 5904 6476 1 chr2B.!!$F1 572
8 TraesCS5B01G422000 chr2B 647431149 647431746 597 True 464.000000 464 81.169000 5903 6503 1 chr2B.!!$R2 600
9 TraesCS5B01G422000 chr4B 577666162 577666788 626 True 656.000000 656 86.392000 5904 6503 1 chr4B.!!$R1 599
10 TraesCS5B01G422000 chr4B 582296939 582297456 517 False 612.000000 612 88.269000 3277 3786 1 chr4B.!!$F1 509
11 TraesCS5B01G422000 chr7B 88557656 88558240 584 True 628.000000 628 86.477000 5906 6487 1 chr7B.!!$R1 581
12 TraesCS5B01G422000 chr3B 749989284 749989893 609 True 621.000000 621 86.201000 5904 6476 1 chr3B.!!$R2 572
13 TraesCS5B01G422000 chr3B 666796944 666797581 637 True 538.000000 538 83.022000 5904 6502 1 chr3B.!!$R1 598
14 TraesCS5B01G422000 chr6B 668973875 668974472 597 True 597.000000 597 85.572000 5906 6475 1 chr6B.!!$R2 569
15 TraesCS5B01G422000 chr6B 198976023 198976644 621 True 520.000000 520 83.094000 5900 6475 1 chr6B.!!$R1 575
16 TraesCS5B01G422000 chr7D 472734507 472735069 562 True 401.000000 401 80.651000 5900 6448 1 chr7D.!!$R1 548
17 TraesCS5B01G422000 chr1B 511976966 511977566 600 True 520.000000 520 83.251000 5904 6476 1 chr1B.!!$R1 572
18 TraesCS5B01G422000 chr1B 39592187 39592697 510 False 457.000000 457 83.488000 5933 6449 1 chr1B.!!$F1 516
19 TraesCS5B01G422000 chr1D 479438799 479439357 558 False 392.000000 392 80.245000 5906 6448 1 chr1D.!!$F4 542
20 TraesCS5B01G422000 chr1D 7921607 7922134 527 False 324.000000 324 78.873000 5933 6475 1 chr1D.!!$F1 542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 731 0.107459 GGATGCCAACTCCTCCTCAC 60.107 60.0 0.00 0.0 0.00 3.51 F
1213 1559 0.036294 CTTCCTCCACCCTTTCCGAC 60.036 60.0 0.00 0.0 0.00 4.79 F
1626 1986 0.188834 AAGGAGCGGGGTAGATAGCT 59.811 55.0 0.00 0.0 43.33 3.32 F
2920 3307 0.553819 TACCCCACTGCAACAAGGTT 59.446 50.0 3.73 0.0 0.00 3.50 F
3548 3950 0.676782 GCGGCACCTCAGGTACAAAT 60.677 55.0 0.00 0.0 32.11 2.32 F
4875 5317 0.040204 AAGATTTGGTCTGCAGGGGG 59.960 55.0 15.13 0.0 37.23 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2122 2496 0.038892 GTAGACGTCGTTTCCCAGCA 60.039 55.000 10.46 0.0 0.00 4.41 R
2950 3337 1.145738 ACCAAGGACTTGCACCTGATT 59.854 47.619 6.54 0.0 39.16 2.57 R
3512 3914 1.373999 GCTGCTAGCCCGCTATCTG 60.374 63.158 13.29 0.0 34.48 2.90 R
4175 4585 0.309612 GAAATGGACGTGCAACCGTT 59.690 50.000 15.51 6.1 41.98 4.44 R
5344 5805 0.106335 AGGCAGATCATTCCGCTCAG 59.894 55.000 0.00 0.0 0.00 3.35 R
5887 6452 0.108138 CTAACCTCCTTCACCAGCCG 60.108 60.000 0.00 0.0 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 6.931281 GCATGTTCTAAATACTGGAGCTATGA 59.069 38.462 0.00 0.00 0.00 2.15
66 67 2.672996 CCCTTGCCCCTGTCGTTG 60.673 66.667 0.00 0.00 0.00 4.10
88 89 3.328237 CGTTTTTGTTGCGGAAGTAGT 57.672 42.857 0.00 0.00 0.00 2.73
90 91 2.766970 TTTTGTTGCGGAAGTAGTGC 57.233 45.000 0.00 0.00 0.00 4.40
91 92 1.669604 TTTGTTGCGGAAGTAGTGCA 58.330 45.000 0.00 0.00 36.72 4.57
92 93 1.669604 TTGTTGCGGAAGTAGTGCAA 58.330 45.000 0.00 0.00 45.54 4.08
111 121 3.181483 GCAAGAATGGATTGAGCCGAATT 60.181 43.478 0.00 0.00 0.00 2.17
113 123 4.644103 AGAATGGATTGAGCCGAATTTG 57.356 40.909 0.00 0.00 0.00 2.32
123 133 3.266510 AGCCGAATTTGCTCACTATCA 57.733 42.857 0.00 0.00 32.41 2.15
124 134 3.609853 AGCCGAATTTGCTCACTATCAA 58.390 40.909 0.00 0.00 32.41 2.57
127 137 4.094887 GCCGAATTTGCTCACTATCAAAGA 59.905 41.667 0.00 0.00 35.89 2.52
133 143 9.102757 GAATTTGCTCACTATCAAAGATGTCTA 57.897 33.333 0.00 0.00 35.89 2.59
134 144 9.453572 AATTTGCTCACTATCAAAGATGTCTAA 57.546 29.630 0.00 0.00 35.89 2.10
135 145 9.624373 ATTTGCTCACTATCAAAGATGTCTAAT 57.376 29.630 0.00 0.00 35.89 1.73
136 146 8.654230 TTGCTCACTATCAAAGATGTCTAATC 57.346 34.615 0.00 0.00 0.00 1.75
138 148 6.364706 GCTCACTATCAAAGATGTCTAATCCG 59.635 42.308 0.00 0.00 0.00 4.18
139 149 7.348080 TCACTATCAAAGATGTCTAATCCGT 57.652 36.000 0.00 0.00 0.00 4.69
377 661 1.705337 CGGATTTGCAACGGAGCGAT 61.705 55.000 0.00 0.00 37.31 4.58
380 664 0.451783 ATTTGCAACGGAGCGATTCC 59.548 50.000 0.00 0.00 43.04 3.01
416 700 2.781595 TTTTCTCCCGAGACCAGCGC 62.782 60.000 0.00 0.00 37.14 5.92
445 730 0.547471 TGGATGCCAACTCCTCCTCA 60.547 55.000 0.00 0.00 33.69 3.86
446 731 0.107459 GGATGCCAACTCCTCCTCAC 60.107 60.000 0.00 0.00 0.00 3.51
447 732 0.107459 GATGCCAACTCCTCCTCACC 60.107 60.000 0.00 0.00 0.00 4.02
482 767 1.202651 GGTCCCATTCGACGGATCAAT 60.203 52.381 1.47 0.00 33.30 2.57
525 810 1.277557 GCCTGTCATGTCAGAGAAGGT 59.722 52.381 19.77 0.00 37.61 3.50
530 815 3.584406 TGTCATGTCAGAGAAGGTTGGAT 59.416 43.478 0.00 0.00 0.00 3.41
547 832 1.475213 GGATAAGAGCTTGGGAACGGG 60.475 57.143 0.00 0.00 0.00 5.28
549 834 2.193087 TAAGAGCTTGGGAACGGGGC 62.193 60.000 0.00 0.00 0.00 5.80
572 857 1.188863 GTCGCTAGGGTTTGGTCCTA 58.811 55.000 6.70 0.00 35.92 2.94
586 871 4.204792 TGGTCCTAGATGTGGATGAGAT 57.795 45.455 0.00 0.00 35.87 2.75
588 873 4.155709 GGTCCTAGATGTGGATGAGATGA 58.844 47.826 0.00 0.00 35.87 2.92
628 915 1.517257 CTCGTGTGTGCCGGATCTC 60.517 63.158 5.05 0.00 0.00 2.75
641 928 2.202932 ATCTCACGTGGCGGATGC 60.203 61.111 17.00 0.00 41.71 3.91
667 955 2.584608 CTCCCATGTCGACCCCAC 59.415 66.667 14.12 0.00 0.00 4.61
673 961 1.543208 CCATGTCGACCCCACATATGG 60.543 57.143 14.12 13.27 46.81 2.74
675 963 0.539518 TGTCGACCCCACATATGGTG 59.460 55.000 14.12 3.23 45.66 4.17
691 979 7.464273 ACATATGGTGTGGATATGAATGATGT 58.536 34.615 7.80 0.00 40.28 3.06
693 981 5.370875 TGGTGTGGATATGAATGATGTCA 57.629 39.130 0.00 0.00 0.00 3.58
703 1006 7.387673 GGATATGAATGATGTCACCAATACGAA 59.612 37.037 0.00 0.00 0.00 3.85
718 1021 2.119801 ACGAAGGATGCAGCTGATTT 57.880 45.000 20.43 0.00 0.00 2.17
733 1040 4.219288 AGCTGATTTGTGATTTCTTGACCC 59.781 41.667 0.00 0.00 0.00 4.46
742 1049 2.526304 TTTCTTGACCCGTCACTGAG 57.474 50.000 0.00 0.00 39.66 3.35
747 1054 2.203640 ACCCGTCACTGAGCAGGA 60.204 61.111 2.20 0.00 0.00 3.86
757 1064 1.538629 TGAGCAGGACATCCACCCA 60.539 57.895 0.00 0.00 38.89 4.51
773 1081 2.293122 CACCCAAACATACAGTGGTGTG 59.707 50.000 4.45 0.00 41.43 3.82
782 1090 0.753262 ACAGTGGTGTGTGAGGAGTC 59.247 55.000 0.00 0.00 34.75 3.36
783 1091 1.043816 CAGTGGTGTGTGAGGAGTCT 58.956 55.000 0.00 0.00 0.00 3.24
784 1092 2.239400 CAGTGGTGTGTGAGGAGTCTA 58.761 52.381 0.00 0.00 0.00 2.59
785 1093 2.230025 CAGTGGTGTGTGAGGAGTCTAG 59.770 54.545 0.00 0.00 0.00 2.43
786 1094 1.067495 GTGGTGTGTGAGGAGTCTAGC 60.067 57.143 0.00 0.00 0.00 3.42
787 1095 0.533032 GGTGTGTGAGGAGTCTAGCC 59.467 60.000 0.00 0.00 0.00 3.93
788 1096 0.171455 GTGTGTGAGGAGTCTAGCCG 59.829 60.000 0.00 0.00 0.00 5.52
789 1097 0.251209 TGTGTGAGGAGTCTAGCCGT 60.251 55.000 0.00 0.00 0.00 5.68
790 1098 1.003928 TGTGTGAGGAGTCTAGCCGTA 59.996 52.381 0.00 0.00 0.00 4.02
791 1099 1.671845 GTGTGAGGAGTCTAGCCGTAG 59.328 57.143 0.00 0.00 0.00 3.51
792 1100 1.558294 TGTGAGGAGTCTAGCCGTAGA 59.442 52.381 0.00 0.00 32.47 2.59
793 1101 2.172930 TGTGAGGAGTCTAGCCGTAGAT 59.827 50.000 0.00 0.00 37.62 1.98
794 1102 2.550606 GTGAGGAGTCTAGCCGTAGATG 59.449 54.545 0.00 0.00 37.62 2.90
795 1103 1.538075 GAGGAGTCTAGCCGTAGATGC 59.462 57.143 0.00 0.00 37.62 3.91
796 1104 1.144093 AGGAGTCTAGCCGTAGATGCT 59.856 52.381 0.00 0.00 42.81 3.79
802 1110 5.974108 AGTCTAGCCGTAGATGCTTTTTAA 58.026 37.500 0.00 0.00 40.23 1.52
855 1163 7.836479 ATACCTAGTAGTCCACTGGATTAAC 57.164 40.000 0.00 0.55 37.96 2.01
862 1170 5.568620 AGTCCACTGGATTAACAAAGACT 57.431 39.130 0.00 0.00 32.73 3.24
863 1171 5.552178 AGTCCACTGGATTAACAAAGACTC 58.448 41.667 0.00 0.00 32.73 3.36
865 1173 6.497259 AGTCCACTGGATTAACAAAGACTCTA 59.503 38.462 0.00 0.00 32.73 2.43
866 1174 7.016268 AGTCCACTGGATTAACAAAGACTCTAA 59.984 37.037 0.00 0.00 32.73 2.10
867 1175 7.824779 GTCCACTGGATTAACAAAGACTCTAAT 59.175 37.037 0.00 0.00 32.73 1.73
868 1176 8.041323 TCCACTGGATTAACAAAGACTCTAATC 58.959 37.037 0.00 0.00 32.38 1.75
870 1178 7.010552 CACTGGATTAACAAAGACTCTAATCCG 59.989 40.741 12.65 10.43 46.92 4.18
892 1207 1.290203 CACATGCGACATCACCTACC 58.710 55.000 0.00 0.00 0.00 3.18
915 1231 1.066143 CCCGTGTAGTGGCAGAAGAAT 60.066 52.381 0.00 0.00 0.00 2.40
917 1233 3.187700 CCGTGTAGTGGCAGAAGAATAC 58.812 50.000 0.00 0.00 0.00 1.89
920 1236 4.184629 GTGTAGTGGCAGAAGAATACCTG 58.815 47.826 0.00 0.00 0.00 4.00
921 1237 4.081642 GTGTAGTGGCAGAAGAATACCTGA 60.082 45.833 0.00 0.00 32.37 3.86
922 1238 4.530553 TGTAGTGGCAGAAGAATACCTGAA 59.469 41.667 0.00 0.00 32.37 3.02
925 1241 3.125316 GTGGCAGAAGAATACCTGAAACG 59.875 47.826 0.00 0.00 32.37 3.60
930 1257 4.393062 CAGAAGAATACCTGAAACGCATGT 59.607 41.667 0.00 0.00 32.37 3.21
952 1281 1.730612 GTTCGCGTAAAGAAGGAAGGG 59.269 52.381 5.77 0.00 0.00 3.95
995 1325 1.526917 CATCCATCGGGGCTGGTTC 60.527 63.158 0.00 0.00 35.19 3.62
997 1327 4.506255 CCATCGGGGCTGGTTCCC 62.506 72.222 0.00 0.00 45.80 3.97
1202 1547 1.077828 TCTGCTCCTCTTCTTCCTCCA 59.922 52.381 0.00 0.00 0.00 3.86
1213 1559 0.036294 CTTCCTCCACCCTTTCCGAC 60.036 60.000 0.00 0.00 0.00 4.79
1228 1574 1.383456 CCGACTGAGAGAGGAGCCAG 61.383 65.000 0.00 0.00 0.00 4.85
1229 1575 1.815866 GACTGAGAGAGGAGCCAGC 59.184 63.158 0.00 0.00 0.00 4.85
1231 1577 2.364842 TGAGAGAGGAGCCAGCCC 60.365 66.667 0.00 0.00 0.00 5.19
1232 1578 3.160748 GAGAGAGGAGCCAGCCCC 61.161 72.222 0.00 0.00 0.00 5.80
1233 1579 3.991924 GAGAGAGGAGCCAGCCCCA 62.992 68.421 0.00 0.00 0.00 4.96
1234 1580 3.478274 GAGAGGAGCCAGCCCCAG 61.478 72.222 0.00 0.00 0.00 4.45
1241 1587 4.047125 GCCAGCCCCAGCCAAGTA 62.047 66.667 0.00 0.00 41.25 2.24
1242 1588 2.044946 CCAGCCCCAGCCAAGTAC 60.045 66.667 0.00 0.00 41.25 2.73
1243 1589 2.436646 CAGCCCCAGCCAAGTACG 60.437 66.667 0.00 0.00 41.25 3.67
1244 1590 2.928396 AGCCCCAGCCAAGTACGT 60.928 61.111 0.00 0.00 41.25 3.57
1245 1591 1.611261 AGCCCCAGCCAAGTACGTA 60.611 57.895 0.00 0.00 41.25 3.57
1250 1596 0.892755 CCAGCCAAGTACGTACTCCA 59.107 55.000 27.51 0.00 34.99 3.86
1264 1610 4.940046 ACGTACTCCATACATATACCTCGG 59.060 45.833 0.00 0.00 32.79 4.63
1323 1670 1.739035 CGGCTCGCCAAGAAATACAGA 60.739 52.381 8.87 0.00 35.37 3.41
1325 1672 2.747446 GGCTCGCCAAGAAATACAGAAA 59.253 45.455 2.41 0.00 35.81 2.52
1326 1673 3.426292 GGCTCGCCAAGAAATACAGAAAC 60.426 47.826 2.41 0.00 35.81 2.78
1331 1678 3.826729 GCCAAGAAATACAGAAACAGGGT 59.173 43.478 0.00 0.00 0.00 4.34
1350 1697 1.832366 GTAAGGGGAGGAGACTTGTCC 59.168 57.143 0.00 0.00 44.43 4.02
1360 1707 2.289133 GGAGACTTGTCCTGTCACTTCC 60.289 54.545 0.00 0.00 36.94 3.46
1364 1715 2.047179 GTCCTGTCACTTCCCGGC 60.047 66.667 0.00 0.00 0.00 6.13
1421 1772 2.564553 ATCGAGCGGAGAACAGTGGC 62.565 60.000 0.00 0.00 0.00 5.01
1426 1777 3.050275 GGAGAACAGTGGCGGTGC 61.050 66.667 0.00 0.00 0.00 5.01
1484 1840 1.476891 TCGGAGCAGTGGACTGATTAC 59.523 52.381 11.06 1.38 43.41 1.89
1511 1867 0.241213 TCTCTTTCTCTCCGTGTGCG 59.759 55.000 0.00 0.00 37.95 5.34
1618 1978 1.331399 GCTAGAAGAAGGAGCGGGGT 61.331 60.000 0.00 0.00 0.00 4.95
1619 1979 2.027949 GCTAGAAGAAGGAGCGGGGTA 61.028 57.143 0.00 0.00 0.00 3.69
1620 1980 1.957877 CTAGAAGAAGGAGCGGGGTAG 59.042 57.143 0.00 0.00 0.00 3.18
1621 1981 0.335361 AGAAGAAGGAGCGGGGTAGA 59.665 55.000 0.00 0.00 0.00 2.59
1626 1986 0.188834 AAGGAGCGGGGTAGATAGCT 59.811 55.000 0.00 0.00 43.33 3.32
1638 1998 0.813210 AGATAGCTTGGCTTGCTCGC 60.813 55.000 7.97 3.07 40.44 5.03
1697 2062 3.895041 TCATCTTCCAGGTTTGTTTTCCC 59.105 43.478 0.00 0.00 0.00 3.97
1708 2073 4.283467 GGTTTGTTTTCCCTGGATAGCTTT 59.717 41.667 0.00 0.00 0.00 3.51
1709 2074 5.470368 GTTTGTTTTCCCTGGATAGCTTTC 58.530 41.667 0.00 0.00 0.00 2.62
1714 2079 2.985896 TCCCTGGATAGCTTTCGTTTG 58.014 47.619 0.00 0.00 0.00 2.93
1715 2080 2.017049 CCCTGGATAGCTTTCGTTTGG 58.983 52.381 0.00 0.00 0.00 3.28
1717 2082 2.420022 CCTGGATAGCTTTCGTTTGGTG 59.580 50.000 0.00 0.00 0.00 4.17
1719 2084 3.482436 TGGATAGCTTTCGTTTGGTGTT 58.518 40.909 0.00 0.00 0.00 3.32
1726 2091 2.953284 TTCGTTTGGTGTTGGGGATA 57.047 45.000 0.00 0.00 0.00 2.59
1729 2094 2.081462 CGTTTGGTGTTGGGGATAGAC 58.919 52.381 0.00 0.00 0.00 2.59
1732 2097 1.153229 GGTGTTGGGGATAGACGGC 60.153 63.158 0.00 0.00 0.00 5.68
1762 2132 3.182312 GCTTCTTGCTTCGGCTCC 58.818 61.111 0.00 0.00 42.37 4.70
1763 2133 2.402572 GCTTCTTGCTTCGGCTCCC 61.403 63.158 0.00 0.00 42.37 4.30
1901 2271 5.529791 TCTCGTGTAAGGACTTCTTTTCTG 58.470 41.667 0.00 0.00 36.93 3.02
1902 2272 4.056050 TCGTGTAAGGACTTCTTTTCTGC 58.944 43.478 0.00 0.00 36.93 4.26
1934 2308 4.039973 AGAAATTTCCCCCTTTTTCGTTCC 59.960 41.667 14.61 0.00 34.17 3.62
1938 2312 1.778484 TCCCCCTTTTTCGTTCCTTCT 59.222 47.619 0.00 0.00 0.00 2.85
2553 2936 0.955919 CTTGCTCCGGTTTGTCCCTC 60.956 60.000 0.00 0.00 0.00 4.30
2679 3063 1.153901 GACCAAATCGTCGAGGCGA 60.154 57.895 1.29 1.29 45.32 5.54
2703 3087 2.361230 TCGAAGCGGAGGAGCAGA 60.361 61.111 0.00 0.00 40.15 4.26
2759 3143 5.299028 TGAGATCAGAGTCAGATGCTACTTC 59.701 44.000 2.28 0.00 0.00 3.01
2767 3151 5.960113 AGTCAGATGCTACTTCTGTTGTAG 58.040 41.667 9.48 0.00 41.13 2.74
2769 3153 6.659668 AGTCAGATGCTACTTCTGTTGTAGTA 59.340 38.462 9.48 0.00 41.13 1.82
2770 3154 7.176865 AGTCAGATGCTACTTCTGTTGTAGTAA 59.823 37.037 9.48 0.00 41.13 2.24
2771 3155 7.976734 GTCAGATGCTACTTCTGTTGTAGTAAT 59.023 37.037 9.48 0.00 41.13 1.89
2772 3156 9.185680 TCAGATGCTACTTCTGTTGTAGTAATA 57.814 33.333 9.48 0.00 41.13 0.98
2773 3157 9.973450 CAGATGCTACTTCTGTTGTAGTAATAT 57.027 33.333 0.00 0.00 39.47 1.28
2890 3277 1.878953 ACGAAAAGATGCGGTCACTT 58.121 45.000 0.00 0.00 0.00 3.16
2920 3307 0.553819 TACCCCACTGCAACAAGGTT 59.446 50.000 3.73 0.00 0.00 3.50
2991 3387 7.353414 TGGTTTGATTCATTTCTGTTGGTTA 57.647 32.000 0.00 0.00 0.00 2.85
2992 3388 7.786030 TGGTTTGATTCATTTCTGTTGGTTAA 58.214 30.769 0.00 0.00 0.00 2.01
2993 3389 8.428063 TGGTTTGATTCATTTCTGTTGGTTAAT 58.572 29.630 0.00 0.00 0.00 1.40
3052 3448 9.762933 TGTTTCTTTCCTTTCCAATCTTTATTG 57.237 29.630 0.00 0.00 41.90 1.90
3197 3593 7.330262 ACCCCATATGACATCAATTTTTGTTC 58.670 34.615 3.65 0.00 0.00 3.18
3200 3597 7.922278 CCCATATGACATCAATTTTTGTTCGAT 59.078 33.333 3.65 0.00 0.00 3.59
3255 3652 6.707440 TGAGACTGAAATCTACCTCAGATC 57.293 41.667 6.10 4.65 43.56 2.75
3298 3695 1.135315 CGCCAATGATGTTTCCTGGTG 60.135 52.381 0.00 0.00 31.71 4.17
3382 3781 5.185635 CAGGGTTTAAATCAGATGGCAAGAA 59.814 40.000 0.00 0.00 0.00 2.52
3402 3801 5.202765 AGAATGCCATACATGAACCATTCA 58.797 37.500 19.98 0.00 45.01 2.57
3512 3914 3.056821 GCAAGTAACCATTTCCTTCACCC 60.057 47.826 0.00 0.00 0.00 4.61
3517 3919 4.946160 AACCATTTCCTTCACCCAGATA 57.054 40.909 0.00 0.00 0.00 1.98
3548 3950 0.676782 GCGGCACCTCAGGTACAAAT 60.677 55.000 0.00 0.00 32.11 2.32
3569 3971 4.432980 TCGATCATAGTACCAGGTCTCA 57.567 45.455 0.00 0.00 0.00 3.27
3859 4269 4.033990 TGTCTAGATAACTTGAGCTGCG 57.966 45.455 0.00 0.00 0.00 5.18
3930 4340 3.690628 GCGGTAGCCAACCTACATAAAAA 59.309 43.478 4.46 0.00 46.73 1.94
4125 4535 9.900710 ATCTGTCATATAATAGACTGTTCGTTC 57.099 33.333 0.00 0.00 35.83 3.95
4130 4540 3.299340 AATAGACTGTTCGTTCGTGCT 57.701 42.857 0.00 0.00 0.00 4.40
4136 4546 2.987149 ACTGTTCGTTCGTGCTAATCTG 59.013 45.455 0.00 0.00 0.00 2.90
4165 4575 6.150976 AGTTTTGACATCTTTGAACACTGTCA 59.849 34.615 0.00 0.00 43.12 3.58
4168 4578 6.063640 TGACATCTTTGAACACTGTCAATG 57.936 37.500 1.48 0.00 42.20 2.82
4178 4588 7.906611 TGAACACTGTCAATGAATTTTAACG 57.093 32.000 0.00 0.00 0.00 3.18
4184 4594 5.592054 TGTCAATGAATTTTAACGGTTGCA 58.408 33.333 3.07 0.00 0.00 4.08
4236 4646 6.013379 TGGATAACTTGAGAACTCAGAACCAT 60.013 38.462 4.72 0.00 41.13 3.55
4307 4717 2.836360 CCTGCACATGGGCCATCC 60.836 66.667 19.33 8.70 0.00 3.51
4390 4803 2.983136 GTCTCGATCAATATGCGTCTGG 59.017 50.000 0.00 0.00 0.00 3.86
4406 4819 5.529791 GCGTCTGGCATAAATACTAGAAGA 58.470 41.667 0.00 0.00 42.87 2.87
4460 4874 9.489084 TCCCATTTATGTCAGAAAAGTATATCG 57.511 33.333 0.00 0.00 0.00 2.92
4511 4925 8.873830 CCTCTGTACATACTAATCACAACTTTG 58.126 37.037 0.00 0.00 0.00 2.77
4564 4978 3.205338 AGGTTTGCAGCCATTTGAAAAC 58.795 40.909 11.27 1.78 43.12 2.43
4591 5005 7.215719 AGTTCTATGGCAAACTTTACCTTTC 57.784 36.000 0.00 0.00 31.81 2.62
4632 5051 3.984508 TCGTCTCCGAGATGGTTTATC 57.015 47.619 16.12 0.00 38.40 1.75
4655 5074 5.132816 TCTGAGAGAAGGGAAAAGAAAAGGT 59.867 40.000 0.00 0.00 0.00 3.50
4783 5223 8.726870 TTAAAGCCAAGGTACTACATATCAAC 57.273 34.615 0.00 0.00 38.49 3.18
4821 5263 2.289565 GGCCTCTTACCTATGTTGCAC 58.710 52.381 0.00 0.00 0.00 4.57
4842 5284 4.023193 CACCACTCTTTTAACACCATCACC 60.023 45.833 0.00 0.00 0.00 4.02
4846 5288 4.010349 CTCTTTTAACACCATCACCTCCC 58.990 47.826 0.00 0.00 0.00 4.30
4875 5317 0.040204 AAGATTTGGTCTGCAGGGGG 59.960 55.000 15.13 0.00 37.23 5.40
4878 5320 1.867595 ATTTGGTCTGCAGGGGGAGG 61.868 60.000 15.13 0.00 32.55 4.30
4880 5322 2.610859 GGTCTGCAGGGGGAGGAA 60.611 66.667 15.13 0.00 32.55 3.36
5041 5489 0.987294 AGAGGGTTCTGTGGTGATGG 59.013 55.000 0.00 0.00 30.72 3.51
5042 5490 0.693049 GAGGGTTCTGTGGTGATGGT 59.307 55.000 0.00 0.00 0.00 3.55
5059 5507 4.020928 TGATGGTAGAGTTTGCGGTTTCTA 60.021 41.667 0.00 0.00 0.00 2.10
5091 5539 0.249120 CTGATGTCTACGGCACCCAA 59.751 55.000 0.00 0.00 0.00 4.12
5108 5562 3.414136 AACCCAGCCAAGTGCACGA 62.414 57.895 12.01 0.00 44.83 4.35
5109 5563 3.357079 CCCAGCCAAGTGCACGAC 61.357 66.667 12.01 2.15 44.83 4.34
5110 5564 2.591429 CCAGCCAAGTGCACGACA 60.591 61.111 12.01 0.00 44.83 4.35
5111 5565 1.968017 CCAGCCAAGTGCACGACAT 60.968 57.895 12.01 0.00 44.83 3.06
5135 5589 0.462047 GTTACATGGTCCTCCTGGCG 60.462 60.000 0.00 0.00 34.23 5.69
5140 5594 3.083997 GGTCCTCCTGGCGACCAT 61.084 66.667 21.30 0.00 46.59 3.55
5221 5680 1.546476 CTGAGCTTTCCTGTCTACCGT 59.454 52.381 0.00 0.00 0.00 4.83
5225 5684 2.233186 AGCTTTCCTGTCTACCGTAACC 59.767 50.000 0.00 0.00 0.00 2.85
5246 5705 1.037493 GTAAAATGCCGGATTCCCCC 58.963 55.000 5.05 0.00 0.00 5.40
5270 5729 0.170561 CTTGCTGCTCATCTGTTGCC 59.829 55.000 0.00 0.00 0.00 4.52
5271 5730 1.246056 TTGCTGCTCATCTGTTGCCC 61.246 55.000 0.00 0.00 0.00 5.36
5272 5731 1.378250 GCTGCTCATCTGTTGCCCT 60.378 57.895 0.00 0.00 0.00 5.19
5273 5732 1.375098 GCTGCTCATCTGTTGCCCTC 61.375 60.000 0.00 0.00 0.00 4.30
5274 5733 0.252479 CTGCTCATCTGTTGCCCTCT 59.748 55.000 0.00 0.00 0.00 3.69
5275 5734 0.251354 TGCTCATCTGTTGCCCTCTC 59.749 55.000 0.00 0.00 0.00 3.20
5276 5735 0.809241 GCTCATCTGTTGCCCTCTCG 60.809 60.000 0.00 0.00 0.00 4.04
5277 5736 0.809241 CTCATCTGTTGCCCTCTCGC 60.809 60.000 0.00 0.00 0.00 5.03
5278 5737 1.220206 CATCTGTTGCCCTCTCGCT 59.780 57.895 0.00 0.00 0.00 4.93
5279 5738 0.809241 CATCTGTTGCCCTCTCGCTC 60.809 60.000 0.00 0.00 0.00 5.03
5280 5739 2.290122 ATCTGTTGCCCTCTCGCTCG 62.290 60.000 0.00 0.00 0.00 5.03
5281 5740 4.742201 TGTTGCCCTCTCGCTCGC 62.742 66.667 0.00 0.00 0.00 5.03
5282 5741 4.443266 GTTGCCCTCTCGCTCGCT 62.443 66.667 0.00 0.00 0.00 4.93
5283 5742 4.135153 TTGCCCTCTCGCTCGCTC 62.135 66.667 0.00 0.00 0.00 5.03
5287 5746 4.605967 CCTCTCGCTCGCTCGCTC 62.606 72.222 0.00 0.00 0.00 5.03
5288 5747 4.936248 CTCTCGCTCGCTCGCTCG 62.936 72.222 0.00 0.00 0.00 5.03
5314 5774 4.485208 GTCGCGGCGCTTTCTTCG 62.485 66.667 30.54 12.47 0.00 3.79
5332 5792 1.064134 GGGATGAAAATGACGCGCC 59.936 57.895 5.73 0.00 0.00 6.53
5355 5816 3.084579 GCGTGTCTGAGCGGAATG 58.915 61.111 4.20 0.00 0.00 2.67
5358 5819 1.203928 CGTGTCTGAGCGGAATGATC 58.796 55.000 0.00 0.00 0.00 2.92
5373 5846 0.616964 TGATCTGCCTCTCCTGTGCT 60.617 55.000 0.00 0.00 0.00 4.40
5380 5853 1.517242 CCTCTCCTGTGCTGTTGTTC 58.483 55.000 0.00 0.00 0.00 3.18
5429 5904 2.505557 CGTCGTGGTAGAACGGGC 60.506 66.667 0.00 0.00 43.73 6.13
5431 5906 1.217244 GTCGTGGTAGAACGGGCAT 59.783 57.895 0.00 0.00 43.73 4.40
5471 5946 2.095853 GTGGCTATGTGTTGGATGAACG 59.904 50.000 0.00 0.00 37.38 3.95
5488 6053 7.011389 TGGATGAACGAGTAGCAAAAATAGATG 59.989 37.037 0.00 0.00 0.00 2.90
5605 6170 2.249844 ACTACACCACGAAACCTTGG 57.750 50.000 0.00 0.00 39.00 3.61
5607 6172 0.535553 TACACCACGAAACCTTGGGC 60.536 55.000 0.00 0.00 37.18 5.36
5609 6174 2.281208 CCACGAAACCTTGGGCGA 60.281 61.111 0.00 0.00 0.00 5.54
5611 6176 1.501741 CACGAAACCTTGGGCGATG 59.498 57.895 0.00 0.00 0.00 3.84
5618 6183 1.675310 CCTTGGGCGATGTGCTTCA 60.675 57.895 0.00 0.00 45.43 3.02
5627 6192 3.360533 GCGATGTGCTTCAATCATCAAG 58.639 45.455 0.00 0.00 41.73 3.02
5640 6205 7.381766 TCAATCATCAAGGGATATATTTGCG 57.618 36.000 0.00 0.00 30.87 4.85
5664 6229 2.098117 GCAATCATGAAAGGAAGGGTCG 59.902 50.000 0.00 0.00 0.00 4.79
5665 6230 3.609853 CAATCATGAAAGGAAGGGTCGA 58.390 45.455 0.00 0.00 0.00 4.20
5686 6251 4.319622 CGATAGAGCTACAGGTTCGGTAAG 60.320 50.000 0.00 0.00 39.76 2.34
5755 6320 4.582701 TTTGCATCGAAACTTTGTGGAT 57.417 36.364 0.00 0.00 0.00 3.41
5789 6354 3.610040 ACAGACGATTACAATCAGCCA 57.390 42.857 0.00 0.00 35.11 4.75
5790 6355 3.525537 ACAGACGATTACAATCAGCCAG 58.474 45.455 0.00 0.00 35.11 4.85
5791 6356 3.055819 ACAGACGATTACAATCAGCCAGT 60.056 43.478 0.00 0.00 35.11 4.00
5792 6357 4.159693 ACAGACGATTACAATCAGCCAGTA 59.840 41.667 0.00 0.00 35.11 2.74
5815 6380 2.747686 TCCACAAGGAACTCCGGC 59.252 61.111 0.00 0.00 42.23 6.13
5816 6381 2.359975 CCACAAGGAACTCCGGCC 60.360 66.667 0.00 0.00 38.49 6.13
5817 6382 2.359975 CACAAGGAACTCCGGCCC 60.360 66.667 0.00 0.00 38.49 5.80
5818 6383 3.647771 ACAAGGAACTCCGGCCCC 61.648 66.667 0.00 0.00 38.49 5.80
5819 6384 3.330720 CAAGGAACTCCGGCCCCT 61.331 66.667 0.00 0.00 38.49 4.79
5820 6385 2.531942 AAGGAACTCCGGCCCCTT 60.532 61.111 0.00 0.00 38.49 3.95
5821 6386 1.229723 AAGGAACTCCGGCCCCTTA 60.230 57.895 6.91 0.00 38.49 2.69
5822 6387 0.623617 AAGGAACTCCGGCCCCTTAT 60.624 55.000 6.91 0.00 38.49 1.73
5823 6388 1.148498 GGAACTCCGGCCCCTTATG 59.852 63.158 0.00 0.00 0.00 1.90
5824 6389 1.632965 GGAACTCCGGCCCCTTATGT 61.633 60.000 0.00 0.00 0.00 2.29
5825 6390 1.125633 GAACTCCGGCCCCTTATGTA 58.874 55.000 0.00 0.00 0.00 2.29
5826 6391 1.070289 GAACTCCGGCCCCTTATGTAG 59.930 57.143 0.00 0.00 0.00 2.74
5827 6392 1.371558 CTCCGGCCCCTTATGTAGC 59.628 63.158 0.00 0.00 0.00 3.58
5828 6393 2.113243 CTCCGGCCCCTTATGTAGCC 62.113 65.000 0.00 0.00 42.18 3.93
5830 6395 2.281553 GGCCCCTTATGTAGCCGC 60.282 66.667 0.00 0.00 35.30 6.53
5831 6396 2.819284 GGCCCCTTATGTAGCCGCT 61.819 63.158 0.00 0.00 35.30 5.52
5832 6397 1.477685 GGCCCCTTATGTAGCCGCTA 61.478 60.000 0.00 0.00 35.30 4.26
5833 6398 0.320508 GCCCCTTATGTAGCCGCTAC 60.321 60.000 21.57 21.57 37.46 3.58
5834 6399 0.320697 CCCCTTATGTAGCCGCTACC 59.679 60.000 24.53 9.85 36.24 3.18
5835 6400 0.320697 CCCTTATGTAGCCGCTACCC 59.679 60.000 24.53 4.73 36.24 3.69
5836 6401 1.339097 CCTTATGTAGCCGCTACCCT 58.661 55.000 24.53 15.56 36.24 4.34
5837 6402 1.692519 CCTTATGTAGCCGCTACCCTT 59.307 52.381 24.53 13.55 36.24 3.95
5838 6403 2.895404 CCTTATGTAGCCGCTACCCTTA 59.105 50.000 24.53 12.69 36.24 2.69
5839 6404 3.322828 CCTTATGTAGCCGCTACCCTTAA 59.677 47.826 24.53 17.81 36.24 1.85
5840 6405 4.020485 CCTTATGTAGCCGCTACCCTTAAT 60.020 45.833 24.53 14.63 36.24 1.40
5841 6406 3.679824 ATGTAGCCGCTACCCTTAATC 57.320 47.619 24.53 1.27 36.24 1.75
5842 6407 2.390696 TGTAGCCGCTACCCTTAATCA 58.609 47.619 24.53 3.83 36.24 2.57
5843 6408 2.364324 TGTAGCCGCTACCCTTAATCAG 59.636 50.000 24.53 0.00 36.24 2.90
5844 6409 1.497161 AGCCGCTACCCTTAATCAGT 58.503 50.000 0.00 0.00 0.00 3.41
5845 6410 1.139058 AGCCGCTACCCTTAATCAGTG 59.861 52.381 0.00 0.00 0.00 3.66
5846 6411 1.810412 GCCGCTACCCTTAATCAGTGG 60.810 57.143 0.00 0.00 40.83 4.00
5847 6412 1.202651 CCGCTACCCTTAATCAGTGGG 60.203 57.143 0.00 0.00 46.07 4.61
5848 6413 1.202651 CGCTACCCTTAATCAGTGGGG 60.203 57.143 0.00 0.17 44.97 4.96
5851 6416 3.191182 CCCTTAATCAGTGGGGTGC 57.809 57.895 0.00 0.00 37.37 5.01
5852 6417 0.331278 CCCTTAATCAGTGGGGTGCA 59.669 55.000 0.00 0.00 37.37 4.57
5853 6418 1.272425 CCCTTAATCAGTGGGGTGCAA 60.272 52.381 0.00 0.00 37.37 4.08
5854 6419 2.094675 CCTTAATCAGTGGGGTGCAAG 58.905 52.381 0.00 0.00 0.00 4.01
5855 6420 2.555227 CCTTAATCAGTGGGGTGCAAGT 60.555 50.000 0.00 0.00 0.00 3.16
5856 6421 2.198827 TAATCAGTGGGGTGCAAGTG 57.801 50.000 0.00 0.00 0.00 3.16
5857 6422 1.181098 AATCAGTGGGGTGCAAGTGC 61.181 55.000 0.00 0.00 42.50 4.40
5858 6423 2.072874 ATCAGTGGGGTGCAAGTGCT 62.073 55.000 4.69 0.00 42.66 4.40
5859 6424 2.203394 AGTGGGGTGCAAGTGCTG 60.203 61.111 4.69 0.00 42.66 4.41
5860 6425 2.203337 GTGGGGTGCAAGTGCTGA 60.203 61.111 4.69 0.00 42.66 4.26
5861 6426 1.604593 GTGGGGTGCAAGTGCTGAT 60.605 57.895 4.69 0.00 42.66 2.90
5862 6427 1.604308 TGGGGTGCAAGTGCTGATG 60.604 57.895 4.69 0.00 42.66 3.07
5863 6428 1.303561 GGGGTGCAAGTGCTGATGA 60.304 57.895 4.69 0.00 42.66 2.92
5864 6429 0.895100 GGGGTGCAAGTGCTGATGAA 60.895 55.000 4.69 0.00 42.66 2.57
5865 6430 0.961019 GGGTGCAAGTGCTGATGAAA 59.039 50.000 4.69 0.00 42.66 2.69
5866 6431 1.068055 GGGTGCAAGTGCTGATGAAAG 60.068 52.381 4.69 0.00 42.66 2.62
5867 6432 1.881973 GGTGCAAGTGCTGATGAAAGA 59.118 47.619 4.69 0.00 42.66 2.52
5868 6433 2.294233 GGTGCAAGTGCTGATGAAAGAA 59.706 45.455 4.69 0.00 42.66 2.52
5869 6434 3.243501 GGTGCAAGTGCTGATGAAAGAAA 60.244 43.478 4.69 0.00 42.66 2.52
5870 6435 3.732721 GTGCAAGTGCTGATGAAAGAAAC 59.267 43.478 4.69 0.00 42.66 2.78
5871 6436 3.380954 TGCAAGTGCTGATGAAAGAAACA 59.619 39.130 4.69 0.00 42.66 2.83
5872 6437 4.038282 TGCAAGTGCTGATGAAAGAAACAT 59.962 37.500 4.69 0.00 42.66 2.71
5873 6438 4.620184 GCAAGTGCTGATGAAAGAAACATC 59.380 41.667 0.00 0.00 42.81 3.06
5874 6439 5.564259 GCAAGTGCTGATGAAAGAAACATCT 60.564 40.000 0.00 0.00 42.89 2.90
5875 6440 5.876612 AGTGCTGATGAAAGAAACATCTC 57.123 39.130 0.00 0.00 42.89 2.75
5876 6441 5.311265 AGTGCTGATGAAAGAAACATCTCA 58.689 37.500 0.00 0.00 42.89 3.27
5877 6442 5.180868 AGTGCTGATGAAAGAAACATCTCAC 59.819 40.000 5.10 5.10 42.89 3.51
5878 6443 5.180868 GTGCTGATGAAAGAAACATCTCACT 59.819 40.000 5.56 0.00 42.89 3.41
5879 6444 5.766670 TGCTGATGAAAGAAACATCTCACTT 59.233 36.000 0.00 0.00 42.89 3.16
5880 6445 6.084925 GCTGATGAAAGAAACATCTCACTTG 58.915 40.000 0.00 0.00 42.89 3.16
5881 6446 6.293845 GCTGATGAAAGAAACATCTCACTTGT 60.294 38.462 0.00 0.00 42.89 3.16
5882 6447 6.962686 TGATGAAAGAAACATCTCACTTGTG 58.037 36.000 0.00 0.00 42.89 3.33
5883 6448 5.756195 TGAAAGAAACATCTCACTTGTGG 57.244 39.130 0.64 0.00 0.00 4.17
5884 6449 5.192927 TGAAAGAAACATCTCACTTGTGGT 58.807 37.500 0.64 0.00 0.00 4.16
5885 6450 6.353323 TGAAAGAAACATCTCACTTGTGGTA 58.647 36.000 0.64 0.00 0.00 3.25
5886 6451 6.260050 TGAAAGAAACATCTCACTTGTGGTAC 59.740 38.462 0.64 0.00 0.00 3.34
5887 6452 4.642429 AGAAACATCTCACTTGTGGTACC 58.358 43.478 4.43 4.43 0.00 3.34
5888 6453 2.743636 ACATCTCACTTGTGGTACCG 57.256 50.000 7.57 0.00 0.00 4.02
5889 6454 1.275291 ACATCTCACTTGTGGTACCGG 59.725 52.381 7.57 0.00 0.00 5.28
5890 6455 0.249398 ATCTCACTTGTGGTACCGGC 59.751 55.000 7.57 3.24 0.00 6.13
5891 6456 0.830444 TCTCACTTGTGGTACCGGCT 60.830 55.000 7.57 0.00 0.00 5.52
5892 6457 0.670546 CTCACTTGTGGTACCGGCTG 60.671 60.000 7.57 0.28 0.00 4.85
5893 6458 1.671054 CACTTGTGGTACCGGCTGG 60.671 63.158 11.02 11.02 42.84 4.85
6060 6653 8.972458 TGTATAGCAAATTTAGGCATAGTTCA 57.028 30.769 3.62 0.00 0.00 3.18
6104 6710 5.415701 CGGCAAACTTGGGCATATATTAGAT 59.584 40.000 0.00 0.00 0.00 1.98
6208 6847 1.517832 CATCGTCGGCCTTCTCCTT 59.482 57.895 0.00 0.00 0.00 3.36
6448 7238 3.999701 AGACCCGTCTCCGTCTTC 58.000 61.111 0.00 0.00 35.84 2.87
6449 7239 1.074423 AGACCCGTCTCCGTCTTCA 59.926 57.895 0.00 0.00 35.84 3.02
6450 7240 1.212229 GACCCGTCTCCGTCTTCAC 59.788 63.158 0.00 0.00 0.00 3.18
6451 7241 2.210341 GACCCGTCTCCGTCTTCACC 62.210 65.000 0.00 0.00 0.00 4.02
6452 7242 2.178521 CCGTCTCCGTCTTCACCG 59.821 66.667 0.00 0.00 0.00 4.94
6453 7243 2.330372 CCGTCTCCGTCTTCACCGA 61.330 63.158 0.00 0.00 0.00 4.69
6454 7244 1.154263 CGTCTCCGTCTTCACCGAC 60.154 63.158 0.00 0.00 0.00 4.79
6460 7250 3.173240 GTCTTCACCGACGCGAGC 61.173 66.667 15.93 2.83 0.00 5.03
6461 7251 4.415332 TCTTCACCGACGCGAGCC 62.415 66.667 15.93 0.00 0.00 4.70
6477 7267 4.078516 CCCCGACCCCGTCTTCAC 62.079 72.222 0.00 0.00 0.00 3.18
6478 7268 4.078516 CCCGACCCCGTCTTCACC 62.079 72.222 0.00 0.00 0.00 4.02
6479 7269 4.430765 CCGACCCCGTCTTCACCG 62.431 72.222 0.00 0.00 0.00 4.94
6480 7270 3.367743 CGACCCCGTCTTCACCGA 61.368 66.667 0.00 0.00 0.00 4.69
6481 7271 2.260743 GACCCCGTCTTCACCGAC 59.739 66.667 0.00 0.00 0.00 4.79
6487 7277 3.173240 GTCTTCACCGACGCGAGC 61.173 66.667 15.93 2.83 0.00 5.03
6488 7278 4.415332 TCTTCACCGACGCGAGCC 62.415 66.667 15.93 0.00 0.00 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.625313 GGCTGAACTTTCTTCATAGCTCC 59.375 47.826 0.00 0.00 0.00 4.70
28 29 1.332195 GGCCTTGGCTGAACTTTCTT 58.668 50.000 11.71 0.00 0.00 2.52
66 67 0.526739 ACTTCCGCAACAAAAACGGC 60.527 50.000 0.00 0.00 46.49 5.68
71 72 2.017782 TGCACTACTTCCGCAACAAAA 58.982 42.857 0.00 0.00 31.46 2.44
88 89 1.097232 CGGCTCAATCCATTCTTGCA 58.903 50.000 0.00 0.00 0.00 4.08
90 91 4.644103 AATTCGGCTCAATCCATTCTTG 57.356 40.909 0.00 0.00 0.00 3.02
91 92 4.678840 GCAAATTCGGCTCAATCCATTCTT 60.679 41.667 0.00 0.00 0.00 2.52
92 93 3.181483 GCAAATTCGGCTCAATCCATTCT 60.181 43.478 0.00 0.00 0.00 2.40
111 121 7.712639 GGATTAGACATCTTTGATAGTGAGCAA 59.287 37.037 0.00 0.00 0.00 3.91
113 123 6.364706 CGGATTAGACATCTTTGATAGTGAGC 59.635 42.308 0.00 0.00 0.00 4.26
358 642 1.705337 ATCGCTCCGTTGCAAATCCG 61.705 55.000 0.00 0.00 0.00 4.18
371 655 0.869454 CTCTGCAGTCGGAATCGCTC 60.869 60.000 14.67 0.00 36.13 5.03
377 661 2.659016 CCAGCTCTGCAGTCGGAA 59.341 61.111 14.67 0.00 0.00 4.30
380 664 0.392193 AAATCCCAGCTCTGCAGTCG 60.392 55.000 14.67 7.50 0.00 4.18
384 668 1.340405 GGAGAAAATCCCAGCTCTGCA 60.340 52.381 0.00 0.00 43.01 4.41
430 714 2.224159 GGGTGAGGAGGAGTTGGCA 61.224 63.158 0.00 0.00 0.00 4.92
482 767 2.872440 GCGGATCCGACTCTGAGATCTA 60.872 54.545 37.64 0.00 42.83 1.98
525 810 2.355716 CCGTTCCCAAGCTCTTATCCAA 60.356 50.000 0.00 0.00 0.00 3.53
530 815 1.988015 CCCCGTTCCCAAGCTCTTA 59.012 57.895 0.00 0.00 0.00 2.10
549 834 1.153628 CCAAACCCTAGCGACTCCG 60.154 63.158 0.00 0.00 39.16 4.63
572 857 8.265764 CCACATATATTCATCTCATCCACATCT 58.734 37.037 0.00 0.00 0.00 2.90
577 862 6.501453 TGACCCACATATATTCATCTCATCCA 59.499 38.462 0.00 0.00 0.00 3.41
586 871 3.394274 CCACCCTGACCCACATATATTCA 59.606 47.826 0.00 0.00 0.00 2.57
588 873 2.108250 GCCACCCTGACCCACATATATT 59.892 50.000 0.00 0.00 0.00 1.28
653 940 1.543208 CCATATGTGGGGTCGACATGG 60.543 57.143 18.91 15.29 42.11 3.66
667 955 7.608761 TGACATCATTCATATCCACACCATATG 59.391 37.037 0.00 0.00 36.08 1.78
673 961 5.125356 TGGTGACATCATTCATATCCACAC 58.875 41.667 0.00 0.00 33.40 3.82
675 963 6.889301 ATTGGTGACATCATTCATATCCAC 57.111 37.500 0.00 0.00 42.32 4.02
686 974 4.441792 CATCCTTCGTATTGGTGACATCA 58.558 43.478 0.00 0.00 42.32 3.07
691 979 2.905075 CTGCATCCTTCGTATTGGTGA 58.095 47.619 0.00 0.00 0.00 4.02
693 981 1.210478 AGCTGCATCCTTCGTATTGGT 59.790 47.619 1.02 0.00 0.00 3.67
703 1006 2.502142 TCACAAATCAGCTGCATCCT 57.498 45.000 9.47 0.00 0.00 3.24
718 1021 2.104111 AGTGACGGGTCAAGAAATCACA 59.896 45.455 2.58 0.00 41.85 3.58
733 1040 0.459237 GGATGTCCTGCTCAGTGACG 60.459 60.000 0.00 0.00 33.91 4.35
742 1049 0.539438 TGTTTGGGTGGATGTCCTGC 60.539 55.000 0.09 0.00 36.82 4.85
747 1054 3.420893 CACTGTATGTTTGGGTGGATGT 58.579 45.455 0.00 0.00 0.00 3.06
757 1064 3.135712 TCCTCACACACCACTGTATGTTT 59.864 43.478 0.00 0.00 0.00 2.83
773 1081 2.328819 TCTACGGCTAGACTCCTCAC 57.671 55.000 0.00 0.00 0.00 3.51
782 1090 7.766219 TTAGTTAAAAAGCATCTACGGCTAG 57.234 36.000 0.00 0.00 41.66 3.42
783 1091 9.991906 ATATTAGTTAAAAAGCATCTACGGCTA 57.008 29.630 0.00 0.00 41.66 3.93
784 1092 8.904099 ATATTAGTTAAAAAGCATCTACGGCT 57.096 30.769 0.00 0.00 45.15 5.52
821 1129 8.776119 AGTGGACTACTAGGTATAGTTCAGTTA 58.224 37.037 1.16 0.00 38.24 2.24
830 1138 8.505246 TGTTAATCCAGTGGACTACTAGGTATA 58.495 37.037 15.86 0.00 37.60 1.47
831 1139 7.359849 TGTTAATCCAGTGGACTACTAGGTAT 58.640 38.462 15.86 0.00 37.60 2.73
855 1163 2.280628 GTGCCCGGATTAGAGTCTTTG 58.719 52.381 0.73 0.00 0.00 2.77
862 1170 1.227527 CGCATGTGCCCGGATTAGA 60.228 57.895 0.73 0.00 37.91 2.10
863 1171 1.227527 TCGCATGTGCCCGGATTAG 60.228 57.895 0.73 0.00 37.91 1.73
865 1173 2.824041 GTCGCATGTGCCCGGATT 60.824 61.111 0.73 0.00 37.91 3.01
866 1174 3.405093 ATGTCGCATGTGCCCGGAT 62.405 57.895 0.73 0.00 37.91 4.18
867 1175 4.094646 ATGTCGCATGTGCCCGGA 62.095 61.111 0.73 0.00 37.91 5.14
868 1176 3.576356 GATGTCGCATGTGCCCGG 61.576 66.667 0.00 0.00 37.91 5.73
870 1178 2.764314 GGTGATGTCGCATGTGCCC 61.764 63.158 0.00 0.00 37.91 5.36
915 1231 3.247442 CGAACTACATGCGTTTCAGGTA 58.753 45.455 0.00 0.00 40.56 3.08
917 1233 1.201921 GCGAACTACATGCGTTTCAGG 60.202 52.381 0.00 0.00 0.00 3.86
920 1236 3.183490 CGCGAACTACATGCGTTTC 57.817 52.632 0.00 0.00 46.29 2.78
925 1241 3.241995 CCTTCTTTACGCGAACTACATGC 60.242 47.826 15.93 0.00 0.00 4.06
930 1257 3.367703 CCCTTCCTTCTTTACGCGAACTA 60.368 47.826 15.93 0.00 0.00 2.24
952 1281 1.330829 GCCGGATTCGTTGGATCTTTC 59.669 52.381 5.05 0.00 33.95 2.62
962 1291 4.467084 ATGCACCGCCGGATTCGT 62.467 61.111 11.71 0.00 33.95 3.85
995 1325 2.572284 GACTCGAACTGGACCGGG 59.428 66.667 6.32 0.00 0.00 5.73
997 1327 0.032952 TTTGGACTCGAACTGGACCG 59.967 55.000 0.00 0.00 0.00 4.79
1039 1369 1.452108 CCTTGTCGGATCCCTTGGC 60.452 63.158 6.06 0.00 33.16 4.52
1041 1371 0.460284 CGTCCTTGTCGGATCCCTTG 60.460 60.000 6.06 0.00 45.44 3.61
1043 1373 2.722201 GCGTCCTTGTCGGATCCCT 61.722 63.158 6.06 0.00 45.44 4.20
1044 1374 2.202892 GCGTCCTTGTCGGATCCC 60.203 66.667 6.06 0.00 45.44 3.85
1045 1375 2.202892 GGCGTCCTTGTCGGATCC 60.203 66.667 0.00 0.00 45.44 3.36
1173 1518 3.388703 GAGGAGCAGAGCAGCCCTG 62.389 68.421 0.00 0.00 35.98 4.45
1174 1519 3.082701 GAGGAGCAGAGCAGCCCT 61.083 66.667 0.00 5.85 37.72 5.19
1175 1520 2.591929 GAAGAGGAGCAGAGCAGCCC 62.592 65.000 0.00 0.00 34.23 5.19
1176 1521 1.153389 GAAGAGGAGCAGAGCAGCC 60.153 63.158 0.00 0.00 34.23 4.85
1202 1547 1.551452 CTCTCTCAGTCGGAAAGGGT 58.449 55.000 0.00 0.00 0.00 4.34
1213 1559 2.433994 GGGCTGGCTCCTCTCTCAG 61.434 68.421 0.00 0.00 0.00 3.35
1228 1574 1.449070 GTACGTACTTGGCTGGGGC 60.449 63.158 18.47 0.00 37.82 5.80
1229 1575 0.175073 GAGTACGTACTTGGCTGGGG 59.825 60.000 27.96 0.00 36.50 4.96
1231 1577 0.892755 TGGAGTACGTACTTGGCTGG 59.107 55.000 27.96 0.00 36.50 4.85
1232 1578 2.961526 ATGGAGTACGTACTTGGCTG 57.038 50.000 27.96 0.00 36.50 4.85
1233 1579 3.359033 TGTATGGAGTACGTACTTGGCT 58.641 45.455 27.96 15.62 41.27 4.75
1234 1580 3.788333 TGTATGGAGTACGTACTTGGC 57.212 47.619 27.96 15.82 41.27 4.52
1235 1581 7.392673 AGGTATATGTATGGAGTACGTACTTGG 59.607 40.741 27.96 0.00 41.27 3.61
1236 1582 8.332996 AGGTATATGTATGGAGTACGTACTTG 57.667 38.462 27.96 0.00 41.27 3.16
1237 1583 7.332926 CGAGGTATATGTATGGAGTACGTACTT 59.667 40.741 27.96 15.66 41.27 2.24
1238 1584 6.815641 CGAGGTATATGTATGGAGTACGTACT 59.184 42.308 27.71 27.71 41.27 2.73
1239 1585 6.036517 CCGAGGTATATGTATGGAGTACGTAC 59.963 46.154 18.10 18.10 37.55 3.67
1240 1586 6.108687 CCGAGGTATATGTATGGAGTACGTA 58.891 44.000 0.00 0.00 38.72 3.57
1241 1587 4.940046 CCGAGGTATATGTATGGAGTACGT 59.060 45.833 0.00 0.00 36.01 3.57
1242 1588 4.201891 GCCGAGGTATATGTATGGAGTACG 60.202 50.000 0.00 0.00 36.01 3.67
1243 1589 4.948621 AGCCGAGGTATATGTATGGAGTAC 59.051 45.833 0.00 0.00 0.00 2.73
1244 1590 5.188988 AGCCGAGGTATATGTATGGAGTA 57.811 43.478 0.00 0.00 0.00 2.59
1245 1591 4.017808 GAGCCGAGGTATATGTATGGAGT 58.982 47.826 0.00 0.00 0.00 3.85
1250 1596 3.193691 GCAGTGAGCCGAGGTATATGTAT 59.806 47.826 0.00 0.00 37.23 2.29
1264 1610 0.676151 AGCAGCTTTAGGCAGTGAGC 60.676 55.000 0.00 0.00 44.79 4.26
1301 1648 0.931005 GTATTTCTTGGCGAGCCGAG 59.069 55.000 22.31 22.31 46.58 4.63
1306 1653 4.142816 CCTGTTTCTGTATTTCTTGGCGAG 60.143 45.833 0.00 0.00 0.00 5.03
1323 1670 1.153565 TCTCCTCCCCTTACCCTGTTT 59.846 52.381 0.00 0.00 0.00 2.83
1325 1672 0.042881 GTCTCCTCCCCTTACCCTGT 59.957 60.000 0.00 0.00 0.00 4.00
1326 1673 0.340208 AGTCTCCTCCCCTTACCCTG 59.660 60.000 0.00 0.00 0.00 4.45
1331 1678 1.722851 AGGACAAGTCTCCTCCCCTTA 59.277 52.381 0.00 0.00 35.56 2.69
1350 1697 1.216710 GAGAGCCGGGAAGTGACAG 59.783 63.158 2.18 0.00 0.00 3.51
1360 1707 4.200283 GCCGAGAGTGAGAGCCGG 62.200 72.222 0.00 0.00 42.74 6.13
1364 1715 2.202544 GCGTGCCGAGAGTGAGAG 60.203 66.667 0.00 0.00 0.00 3.20
1380 1731 3.978571 GAGGAGGAAACCCAGCCGC 62.979 68.421 0.00 0.00 0.00 6.53
1381 1732 2.269241 GAGGAGGAAACCCAGCCG 59.731 66.667 0.00 0.00 0.00 5.52
1382 1733 1.925972 AGGAGGAGGAAACCCAGCC 60.926 63.158 0.00 0.00 0.00 4.85
1392 1743 2.560119 CCGCTCGATCAGGAGGAGG 61.560 68.421 0.00 0.00 34.56 4.30
1454 1805 3.408501 CTGCTCCGAGCTCCTGACG 62.409 68.421 20.87 0.00 42.97 4.35
1484 1840 2.666317 GGAGAGAAAGAGAGAGGGAGG 58.334 57.143 0.00 0.00 0.00 4.30
1518 1874 1.185315 GAGAAGAGAGAGCAGCACCT 58.815 55.000 0.00 0.00 0.00 4.00
1519 1875 0.175531 GGAGAAGAGAGAGCAGCACC 59.824 60.000 0.00 0.00 0.00 5.01
1520 1876 0.894141 TGGAGAAGAGAGAGCAGCAC 59.106 55.000 0.00 0.00 0.00 4.40
1521 1877 1.863325 ATGGAGAAGAGAGAGCAGCA 58.137 50.000 0.00 0.00 0.00 4.41
1522 1878 2.985957 AATGGAGAAGAGAGAGCAGC 57.014 50.000 0.00 0.00 0.00 5.25
1523 1879 5.990996 GGAATTAATGGAGAAGAGAGAGCAG 59.009 44.000 0.00 0.00 0.00 4.24
1618 1978 1.539065 GCGAGCAAGCCAAGCTATCTA 60.539 52.381 0.00 0.00 43.58 1.98
1619 1979 0.813210 GCGAGCAAGCCAAGCTATCT 60.813 55.000 0.00 0.00 43.58 1.98
1620 1980 0.813210 AGCGAGCAAGCCAAGCTATC 60.813 55.000 5.02 0.00 43.58 2.08
1621 1981 0.813210 GAGCGAGCAAGCCAAGCTAT 60.813 55.000 6.52 0.00 43.58 2.97
1626 1986 4.722700 GGGGAGCGAGCAAGCCAA 62.723 66.667 0.00 0.00 38.01 4.52
1638 1998 1.340502 GGAAGGAAGCAGAAAGGGGAG 60.341 57.143 0.00 0.00 0.00 4.30
1697 2062 3.074412 ACACCAAACGAAAGCTATCCAG 58.926 45.455 0.00 0.00 0.00 3.86
1703 2068 0.744281 CCCAACACCAAACGAAAGCT 59.256 50.000 0.00 0.00 0.00 3.74
1708 2073 1.979308 TCTATCCCCAACACCAAACGA 59.021 47.619 0.00 0.00 0.00 3.85
1709 2074 2.081462 GTCTATCCCCAACACCAAACG 58.919 52.381 0.00 0.00 0.00 3.60
1714 2079 1.153229 GCCGTCTATCCCCAACACC 60.153 63.158 0.00 0.00 0.00 4.16
1715 2080 0.252197 AAGCCGTCTATCCCCAACAC 59.748 55.000 0.00 0.00 0.00 3.32
1717 2082 0.179054 GGAAGCCGTCTATCCCCAAC 60.179 60.000 0.00 0.00 0.00 3.77
1719 2084 1.002403 TGGAAGCCGTCTATCCCCA 59.998 57.895 0.00 0.00 32.01 4.96
1732 2097 0.890996 AAGAAGCTTGGGCGTGGAAG 60.891 55.000 2.10 0.00 44.37 3.46
1770 2140 1.470979 CCATTCATCCAAGCAAGCAGC 60.471 52.381 0.00 0.00 46.19 5.25
1771 2141 2.097036 TCCATTCATCCAAGCAAGCAG 58.903 47.619 0.00 0.00 0.00 4.24
1772 2142 2.219080 TCCATTCATCCAAGCAAGCA 57.781 45.000 0.00 0.00 0.00 3.91
1773 2143 4.924305 TTATCCATTCATCCAAGCAAGC 57.076 40.909 0.00 0.00 0.00 4.01
1774 2144 5.537295 TCCATTATCCATTCATCCAAGCAAG 59.463 40.000 0.00 0.00 0.00 4.01
1775 2145 5.456779 TCCATTATCCATTCATCCAAGCAA 58.543 37.500 0.00 0.00 0.00 3.91
1776 2146 5.064314 TCCATTATCCATTCATCCAAGCA 57.936 39.130 0.00 0.00 0.00 3.91
1777 2147 4.082354 GCTCCATTATCCATTCATCCAAGC 60.082 45.833 0.00 0.00 0.00 4.01
1901 2271 3.445450 GGGGGAAATTTCTCAAGAAGAGC 59.555 47.826 19.55 0.00 44.35 4.09
1902 2272 4.928263 AGGGGGAAATTTCTCAAGAAGAG 58.072 43.478 19.55 0.00 46.14 2.85
1934 2308 0.940126 CGATGGATGCCCGAAAGAAG 59.060 55.000 0.00 0.00 34.29 2.85
1938 2312 1.134250 TCAATCGATGGATGCCCGAAA 60.134 47.619 0.00 0.00 35.87 3.46
2122 2496 0.038892 GTAGACGTCGTTTCCCAGCA 60.039 55.000 10.46 0.00 0.00 4.41
2129 2503 2.051076 TGCGCGTAGACGTCGTTT 60.051 55.556 10.46 0.00 42.22 3.60
2273 2656 4.530857 GTGGAGCCGATGTCCCCG 62.531 72.222 0.00 0.00 32.49 5.73
2276 2659 1.153349 GAAGGTGGAGCCGATGTCC 60.153 63.158 0.00 0.00 43.70 4.02
2473 2856 1.303643 CCCTTCCTCTTGTGGGCAC 60.304 63.158 0.00 0.00 32.49 5.01
2581 2965 5.292589 AGTTTCAGCTCAAGCAAATTTTGTG 59.707 36.000 10.65 2.71 45.16 3.33
2679 3063 4.052229 CTCCGCTTCGACCCGTGT 62.052 66.667 3.60 0.00 0.00 4.49
2703 3087 3.244700 ACTGGTTATGAACTTCAGCTGCT 60.245 43.478 9.47 0.00 0.00 4.24
2769 3153 8.143835 GCCACCTTGCTCAATTGTAATAATATT 58.856 33.333 5.13 0.00 0.00 1.28
2770 3154 7.506938 AGCCACCTTGCTCAATTGTAATAATAT 59.493 33.333 5.13 0.00 36.75 1.28
2771 3155 6.833416 AGCCACCTTGCTCAATTGTAATAATA 59.167 34.615 5.13 0.00 36.75 0.98
2772 3156 5.658190 AGCCACCTTGCTCAATTGTAATAAT 59.342 36.000 5.13 0.00 36.75 1.28
2773 3157 5.016173 AGCCACCTTGCTCAATTGTAATAA 58.984 37.500 5.13 0.00 36.75 1.40
2774 3158 4.599041 AGCCACCTTGCTCAATTGTAATA 58.401 39.130 5.13 0.00 36.75 0.98
2775 3159 3.434309 AGCCACCTTGCTCAATTGTAAT 58.566 40.909 5.13 0.00 36.75 1.89
2890 3277 2.027192 GCAGTGGGGTATGAGTTCTTGA 60.027 50.000 0.00 0.00 0.00 3.02
2950 3337 1.145738 ACCAAGGACTTGCACCTGATT 59.854 47.619 6.54 0.00 39.16 2.57
3015 3411 9.586435 GGAAAGGAAAGAAACATATGTAAATGG 57.414 33.333 9.21 0.00 0.00 3.16
3052 3448 3.737774 GCTTTGTCAGCCTGAAATTCAAC 59.262 43.478 0.00 0.00 43.65 3.18
3208 3605 8.664992 TCAATTAGGTACCAATAATAGATGCCA 58.335 33.333 15.94 0.00 0.00 4.92
3298 3695 3.044059 GCGGCATGAACTGGTGAGC 62.044 63.158 0.00 0.00 0.00 4.26
3402 3801 5.191727 TCATAGGGATGTGGTTTGACAAT 57.808 39.130 0.00 0.00 34.41 2.71
3411 3810 2.713167 AGATGGGTTCATAGGGATGTGG 59.287 50.000 0.00 0.00 34.41 4.17
3512 3914 1.373999 GCTGCTAGCCCGCTATCTG 60.374 63.158 13.29 0.00 34.48 2.90
3548 3950 4.432980 TGAGACCTGGTACTATGATCGA 57.567 45.455 0.00 0.00 0.00 3.59
3569 3971 8.778059 TCCCCTGTACTAAAATTGAGAACATAT 58.222 33.333 0.00 0.00 0.00 1.78
3810 4220 7.540400 CACAAATGCCGTTGAATAAGAAACATA 59.460 33.333 3.65 0.00 32.59 2.29
3826 4236 5.755375 AGTTATCTAGACATCACAAATGCCG 59.245 40.000 0.00 0.00 0.00 5.69
3859 4269 2.931386 GCGCCGATGTGCTGATAC 59.069 61.111 0.00 0.00 44.66 2.24
4118 4528 3.243336 AGACAGATTAGCACGAACGAAC 58.757 45.455 0.14 0.00 0.00 3.95
4120 4530 3.688185 ACTAGACAGATTAGCACGAACGA 59.312 43.478 0.00 0.00 0.00 3.85
4125 4535 5.633601 TGTCAAAACTAGACAGATTAGCACG 59.366 40.000 0.00 0.00 40.80 5.34
4136 4546 7.852945 CAGTGTTCAAAGATGTCAAAACTAGAC 59.147 37.037 0.00 0.00 36.55 2.59
4165 4575 4.612943 ACGTGCAACCGTTAAAATTCATT 58.387 34.783 0.00 0.00 37.96 2.57
4168 4578 2.975193 GGACGTGCAACCGTTAAAATTC 59.025 45.455 0.63 0.00 41.98 2.17
4175 4585 0.309612 GAAATGGACGTGCAACCGTT 59.690 50.000 15.51 6.10 41.98 4.44
4178 4588 1.539388 TGATGAAATGGACGTGCAACC 59.461 47.619 15.51 6.80 0.00 3.77
4184 4594 4.206477 TCACTGATGATGAAATGGACGT 57.794 40.909 0.00 0.00 0.00 4.34
4406 4819 8.028938 GGAACAGTGTTATCTGCATTTACAATT 58.971 33.333 8.88 0.00 38.84 2.32
4418 4832 2.915869 TGGGAGGGAACAGTGTTATCT 58.084 47.619 8.88 9.27 0.00 1.98
4460 4874 1.466167 TGGAGTTAGACGCGTACTGAC 59.534 52.381 17.32 18.22 0.00 3.51
4564 4978 7.865706 AGGTAAAGTTTGCCATAGAACTATG 57.134 36.000 22.74 13.08 41.86 2.23
4591 5005 9.458374 AGACGATAACACCAATAAAACAAAAAG 57.542 29.630 0.00 0.00 0.00 2.27
4632 5051 5.380900 ACCTTTTCTTTTCCCTTCTCTCAG 58.619 41.667 0.00 0.00 0.00 3.35
4633 5052 5.388599 ACCTTTTCTTTTCCCTTCTCTCA 57.611 39.130 0.00 0.00 0.00 3.27
4655 5074 6.536941 GGCCATTTGACAACAAGAACTTAAAA 59.463 34.615 0.00 0.00 37.32 1.52
4721 5141 8.253113 GGTTTGATATCATGATTGTTTTGACCT 58.747 33.333 14.65 0.00 0.00 3.85
4821 5263 4.398319 AGGTGATGGTGTTAAAAGAGTGG 58.602 43.478 0.00 0.00 0.00 4.00
4842 5284 3.555586 CCAAATCTTGCCACAAAAGGGAG 60.556 47.826 0.00 0.00 0.00 4.30
4846 5288 4.053295 CAGACCAAATCTTGCCACAAAAG 58.947 43.478 0.00 0.00 34.41 2.27
4875 5317 2.041115 GCCCGGCAAGTTCTTCCTC 61.041 63.158 3.91 0.00 0.00 3.71
4878 5320 3.431725 CGGCCCGGCAAGTTCTTC 61.432 66.667 12.58 0.00 0.00 2.87
5041 5489 4.567159 CAGGATAGAAACCGCAAACTCTAC 59.433 45.833 0.00 0.00 0.00 2.59
5042 5490 4.755411 CAGGATAGAAACCGCAAACTCTA 58.245 43.478 0.00 0.00 0.00 2.43
5059 5507 2.097825 GACATCAGGCAAAAGCAGGAT 58.902 47.619 0.00 0.00 0.00 3.24
5091 5539 3.872603 TCGTGCACTTGGCTGGGT 61.873 61.111 16.19 0.00 45.15 4.51
5108 5562 4.079253 GGAGGACCATGTAACAACAATGT 58.921 43.478 0.00 0.00 37.49 2.71
5109 5563 4.156556 CAGGAGGACCATGTAACAACAATG 59.843 45.833 0.00 0.00 38.94 2.82
5110 5564 4.335416 CAGGAGGACCATGTAACAACAAT 58.665 43.478 0.00 0.00 38.94 2.71
5111 5565 3.497763 CCAGGAGGACCATGTAACAACAA 60.498 47.826 0.00 0.00 38.94 2.83
5135 5589 2.548904 GCAGCATCTGAATCTGATGGTC 59.451 50.000 24.96 17.78 44.36 4.02
5138 5592 3.248841 GTGAGCAGCATCTGAATCTGATG 59.751 47.826 21.10 21.10 40.92 3.07
5140 5594 2.419713 GGTGAGCAGCATCTGAATCTGA 60.420 50.000 11.97 0.00 32.44 3.27
5250 5709 0.456312 GCAACAGATGAGCAGCAAGC 60.456 55.000 0.00 0.00 46.19 4.01
5262 5721 2.973899 GAGCGAGAGGGCAACAGA 59.026 61.111 0.00 0.00 39.74 3.41
5270 5729 4.605967 GAGCGAGCGAGCGAGAGG 62.606 72.222 1.41 0.00 43.00 3.69
5271 5730 4.936248 CGAGCGAGCGAGCGAGAG 62.936 72.222 1.41 0.00 43.00 3.20
5295 5754 3.354499 GAAGAAAGCGCCGCGACAG 62.354 63.158 18.91 0.00 0.00 3.51
5296 5755 3.411351 GAAGAAAGCGCCGCGACA 61.411 61.111 18.91 0.00 0.00 4.35
5297 5756 4.485208 CGAAGAAAGCGCCGCGAC 62.485 66.667 18.91 8.07 0.00 5.19
5314 5774 1.064134 GGCGCGTCATTTTCATCCC 59.936 57.895 5.47 0.00 0.00 3.85
5344 5805 0.106335 AGGCAGATCATTCCGCTCAG 59.894 55.000 0.00 0.00 0.00 3.35
5350 5811 1.767681 ACAGGAGAGGCAGATCATTCC 59.232 52.381 0.00 0.00 0.00 3.01
5355 5816 0.179078 CAGCACAGGAGAGGCAGATC 60.179 60.000 0.00 0.00 0.00 2.75
5358 5819 0.954449 CAACAGCACAGGAGAGGCAG 60.954 60.000 0.00 0.00 0.00 4.85
5361 5823 1.071385 AGAACAACAGCACAGGAGAGG 59.929 52.381 0.00 0.00 0.00 3.69
5364 5837 1.071385 AGGAGAACAACAGCACAGGAG 59.929 52.381 0.00 0.00 0.00 3.69
5366 5839 1.233019 CAGGAGAACAACAGCACAGG 58.767 55.000 0.00 0.00 0.00 4.00
5373 5846 5.042463 TGTACAAATCCAGGAGAACAACA 57.958 39.130 0.00 0.00 0.00 3.33
5380 5853 5.063204 TGACAAACTGTACAAATCCAGGAG 58.937 41.667 0.00 0.00 32.90 3.69
5429 5904 2.030540 CACTTCCAGACACAGGCAAATG 60.031 50.000 0.00 0.00 0.00 2.32
5431 5906 1.064758 ACACTTCCAGACACAGGCAAA 60.065 47.619 0.00 0.00 0.00 3.68
5471 5946 8.519492 TTTTGCAACATCTATTTTTGCTACTC 57.481 30.769 0.00 0.00 44.87 2.59
5510 6075 8.404381 CGAAGCCAAATTTTATTTTCGTTTTC 57.596 30.769 12.26 0.00 33.38 2.29
5605 6170 1.672363 TGATGATTGAAGCACATCGCC 59.328 47.619 0.00 0.00 44.04 5.54
5607 6172 3.242969 CCCTTGATGATTGAAGCACATCG 60.243 47.826 0.00 0.00 41.95 3.84
5609 6174 3.972133 TCCCTTGATGATTGAAGCACAT 58.028 40.909 0.00 0.00 0.00 3.21
5611 6176 7.934855 ATATATCCCTTGATGATTGAAGCAC 57.065 36.000 0.00 0.00 32.18 4.40
5618 6183 7.066284 GCTACGCAAATATATCCCTTGATGATT 59.934 37.037 0.69 0.00 32.18 2.57
5640 6205 4.273318 ACCCTTCCTTTCATGATTGCTAC 58.727 43.478 0.00 0.00 0.00 3.58
5656 6221 2.554893 CCTGTAGCTCTATCGACCCTTC 59.445 54.545 0.00 0.00 0.00 3.46
5664 6229 4.579753 ACTTACCGAACCTGTAGCTCTATC 59.420 45.833 0.00 0.00 0.00 2.08
5665 6230 4.534797 ACTTACCGAACCTGTAGCTCTAT 58.465 43.478 0.00 0.00 0.00 1.98
5686 6251 2.450160 CTATCCGAAATTTGCGCCAAC 58.550 47.619 4.18 0.00 0.00 3.77
5755 6320 9.531942 TGTAATCGTCTGTTAACTTTGTAAAGA 57.468 29.630 11.07 0.00 39.31 2.52
5789 6354 1.348036 GTTCCTTGTGGACAGCCTACT 59.652 52.381 0.00 0.00 43.06 2.57
5790 6355 1.348036 AGTTCCTTGTGGACAGCCTAC 59.652 52.381 0.00 0.00 43.06 3.18
5791 6356 1.623811 GAGTTCCTTGTGGACAGCCTA 59.376 52.381 0.00 0.00 43.06 3.93
5792 6357 0.398318 GAGTTCCTTGTGGACAGCCT 59.602 55.000 0.00 0.00 43.06 4.58
5811 6376 2.430367 GGCTACATAAGGGGCCGG 59.570 66.667 0.00 0.00 35.08 6.13
5813 6378 1.477685 TAGCGGCTACATAAGGGGCC 61.478 60.000 5.42 0.00 41.02 5.80
5814 6379 0.320508 GTAGCGGCTACATAAGGGGC 60.321 60.000 29.97 4.21 36.98 5.80
5815 6380 0.320697 GGTAGCGGCTACATAAGGGG 59.679 60.000 33.80 0.00 38.58 4.79
5816 6381 0.320697 GGGTAGCGGCTACATAAGGG 59.679 60.000 33.80 0.00 38.58 3.95
5817 6382 1.339097 AGGGTAGCGGCTACATAAGG 58.661 55.000 33.80 0.00 38.58 2.69
5818 6383 4.595762 TTAAGGGTAGCGGCTACATAAG 57.404 45.455 33.80 0.00 38.58 1.73
5819 6384 4.589798 TGATTAAGGGTAGCGGCTACATAA 59.410 41.667 33.80 27.53 38.58 1.90
5820 6385 4.154176 TGATTAAGGGTAGCGGCTACATA 58.846 43.478 33.80 22.57 38.58 2.29
5821 6386 2.969950 TGATTAAGGGTAGCGGCTACAT 59.030 45.455 33.80 21.70 38.58 2.29
5822 6387 2.364324 CTGATTAAGGGTAGCGGCTACA 59.636 50.000 33.80 18.39 38.58 2.74
5823 6388 2.364647 ACTGATTAAGGGTAGCGGCTAC 59.635 50.000 27.80 27.80 36.33 3.58
5824 6389 2.364324 CACTGATTAAGGGTAGCGGCTA 59.636 50.000 5.42 5.42 0.00 3.93
5825 6390 1.139058 CACTGATTAAGGGTAGCGGCT 59.861 52.381 7.98 7.98 0.00 5.52
5826 6391 1.583054 CACTGATTAAGGGTAGCGGC 58.417 55.000 0.00 0.00 0.00 6.53
5827 6392 1.202651 CCCACTGATTAAGGGTAGCGG 60.203 57.143 0.00 0.00 37.81 5.52
5828 6393 1.202651 CCCCACTGATTAAGGGTAGCG 60.203 57.143 0.00 0.00 41.16 4.26
5829 6394 2.640316 CCCCACTGATTAAGGGTAGC 57.360 55.000 0.00 0.00 41.16 3.58
5833 6398 0.331278 TGCACCCCACTGATTAAGGG 59.669 55.000 0.00 0.00 45.75 3.95
5834 6399 2.094675 CTTGCACCCCACTGATTAAGG 58.905 52.381 0.00 0.00 0.00 2.69
5835 6400 2.489329 CACTTGCACCCCACTGATTAAG 59.511 50.000 0.00 0.00 0.00 1.85
5836 6401 2.513753 CACTTGCACCCCACTGATTAA 58.486 47.619 0.00 0.00 0.00 1.40
5837 6402 1.886222 GCACTTGCACCCCACTGATTA 60.886 52.381 0.00 0.00 41.59 1.75
5838 6403 1.181098 GCACTTGCACCCCACTGATT 61.181 55.000 0.00 0.00 41.59 2.57
5839 6404 1.604593 GCACTTGCACCCCACTGAT 60.605 57.895 0.00 0.00 41.59 2.90
5840 6405 2.203337 GCACTTGCACCCCACTGA 60.203 61.111 0.00 0.00 41.59 3.41
5841 6406 2.203394 AGCACTTGCACCCCACTG 60.203 61.111 3.62 0.00 45.16 3.66
5842 6407 2.072874 ATCAGCACTTGCACCCCACT 62.073 55.000 3.62 0.00 45.16 4.00
5843 6408 1.604593 ATCAGCACTTGCACCCCAC 60.605 57.895 3.62 0.00 45.16 4.61
5844 6409 1.604308 CATCAGCACTTGCACCCCA 60.604 57.895 3.62 0.00 45.16 4.96
5845 6410 0.895100 TTCATCAGCACTTGCACCCC 60.895 55.000 3.62 0.00 45.16 4.95
5846 6411 0.961019 TTTCATCAGCACTTGCACCC 59.039 50.000 3.62 0.00 45.16 4.61
5847 6412 1.881973 TCTTTCATCAGCACTTGCACC 59.118 47.619 3.62 0.00 45.16 5.01
5848 6413 3.631145 TTCTTTCATCAGCACTTGCAC 57.369 42.857 3.62 0.00 45.16 4.57
5849 6414 3.380954 TGTTTCTTTCATCAGCACTTGCA 59.619 39.130 3.62 0.00 45.16 4.08
5850 6415 3.968649 TGTTTCTTTCATCAGCACTTGC 58.031 40.909 0.00 0.00 42.49 4.01
5851 6416 6.010294 AGATGTTTCTTTCATCAGCACTTG 57.990 37.500 8.30 0.00 42.63 3.16
5852 6417 5.766670 TGAGATGTTTCTTTCATCAGCACTT 59.233 36.000 8.30 0.00 42.63 3.16
5853 6418 5.180868 GTGAGATGTTTCTTTCATCAGCACT 59.819 40.000 16.59 0.00 42.63 4.40
5854 6419 5.180868 AGTGAGATGTTTCTTTCATCAGCAC 59.819 40.000 16.34 16.34 42.63 4.40
5855 6420 5.311265 AGTGAGATGTTTCTTTCATCAGCA 58.689 37.500 8.30 3.92 42.63 4.41
5856 6421 5.876612 AGTGAGATGTTTCTTTCATCAGC 57.123 39.130 8.30 1.79 42.63 4.26
5857 6422 7.076362 CACAAGTGAGATGTTTCTTTCATCAG 58.924 38.462 8.30 0.00 42.63 2.90
5858 6423 6.016860 CCACAAGTGAGATGTTTCTTTCATCA 60.017 38.462 0.94 0.00 42.63 3.07
5859 6424 6.016777 ACCACAAGTGAGATGTTTCTTTCATC 60.017 38.462 0.94 0.00 41.11 2.92
5860 6425 5.829924 ACCACAAGTGAGATGTTTCTTTCAT 59.170 36.000 0.94 0.00 30.30 2.57
5861 6426 5.192927 ACCACAAGTGAGATGTTTCTTTCA 58.807 37.500 0.94 0.00 30.30 2.69
5862 6427 5.757850 ACCACAAGTGAGATGTTTCTTTC 57.242 39.130 0.94 0.00 30.30 2.62
5863 6428 5.531287 GGTACCACAAGTGAGATGTTTCTTT 59.469 40.000 7.15 0.00 30.30 2.52
5864 6429 5.063880 GGTACCACAAGTGAGATGTTTCTT 58.936 41.667 7.15 0.00 30.30 2.52
5865 6430 4.642429 GGTACCACAAGTGAGATGTTTCT 58.358 43.478 7.15 0.00 33.88 2.52
5866 6431 3.432252 CGGTACCACAAGTGAGATGTTTC 59.568 47.826 13.54 0.00 0.00 2.78
5867 6432 3.399330 CGGTACCACAAGTGAGATGTTT 58.601 45.455 13.54 0.00 0.00 2.83
5868 6433 2.289444 CCGGTACCACAAGTGAGATGTT 60.289 50.000 13.54 0.00 0.00 2.71
5869 6434 1.275291 CCGGTACCACAAGTGAGATGT 59.725 52.381 13.54 0.00 0.00 3.06
5870 6435 2.007049 GCCGGTACCACAAGTGAGATG 61.007 57.143 13.54 0.00 0.00 2.90
5871 6436 0.249398 GCCGGTACCACAAGTGAGAT 59.751 55.000 13.54 0.00 0.00 2.75
5872 6437 0.830444 AGCCGGTACCACAAGTGAGA 60.830 55.000 13.54 0.00 0.00 3.27
5873 6438 0.670546 CAGCCGGTACCACAAGTGAG 60.671 60.000 13.54 0.00 0.00 3.51
5874 6439 1.369692 CAGCCGGTACCACAAGTGA 59.630 57.895 13.54 0.00 0.00 3.41
5875 6440 1.671054 CCAGCCGGTACCACAAGTG 60.671 63.158 13.54 1.35 0.00 3.16
5876 6441 2.144738 ACCAGCCGGTACCACAAGT 61.145 57.895 13.54 2.13 46.71 3.16
5877 6442 1.671054 CACCAGCCGGTACCACAAG 60.671 63.158 13.54 1.50 46.94 3.16
5878 6443 1.697082 TTCACCAGCCGGTACCACAA 61.697 55.000 13.54 0.00 46.94 3.33
5879 6444 2.107041 CTTCACCAGCCGGTACCACA 62.107 60.000 13.54 0.00 46.94 4.17
5880 6445 1.375523 CTTCACCAGCCGGTACCAC 60.376 63.158 13.54 2.93 46.94 4.16
5881 6446 2.589157 CCTTCACCAGCCGGTACCA 61.589 63.158 13.54 0.00 46.94 3.25
5882 6447 2.240162 CTCCTTCACCAGCCGGTACC 62.240 65.000 1.90 0.16 46.94 3.34
5883 6448 1.218316 CTCCTTCACCAGCCGGTAC 59.782 63.158 1.90 0.00 46.94 3.34
5884 6449 1.987855 CCTCCTTCACCAGCCGGTA 60.988 63.158 1.90 0.00 46.94 4.02
5886 6451 1.550130 TAACCTCCTTCACCAGCCGG 61.550 60.000 0.00 0.00 38.77 6.13
5887 6452 0.108138 CTAACCTCCTTCACCAGCCG 60.108 60.000 0.00 0.00 0.00 5.52
5888 6453 1.208293 CTCTAACCTCCTTCACCAGCC 59.792 57.143 0.00 0.00 0.00 4.85
5889 6454 1.406205 GCTCTAACCTCCTTCACCAGC 60.406 57.143 0.00 0.00 0.00 4.85
5890 6455 1.902508 TGCTCTAACCTCCTTCACCAG 59.097 52.381 0.00 0.00 0.00 4.00
5891 6456 2.024176 TGCTCTAACCTCCTTCACCA 57.976 50.000 0.00 0.00 0.00 4.17
5892 6457 2.769095 AGATGCTCTAACCTCCTTCACC 59.231 50.000 0.00 0.00 0.00 4.02
5893 6458 3.181470 GGAGATGCTCTAACCTCCTTCAC 60.181 52.174 0.00 0.00 41.40 3.18
5894 6459 3.034635 GGAGATGCTCTAACCTCCTTCA 58.965 50.000 0.00 0.00 41.40 3.02
5895 6460 3.034635 TGGAGATGCTCTAACCTCCTTC 58.965 50.000 0.00 0.00 44.13 3.46
5896 6461 3.037549 CTGGAGATGCTCTAACCTCCTT 58.962 50.000 0.00 0.00 44.13 3.36
5897 6462 2.676748 CTGGAGATGCTCTAACCTCCT 58.323 52.381 0.00 0.00 44.13 3.69
5898 6463 1.069978 GCTGGAGATGCTCTAACCTCC 59.930 57.143 0.00 0.00 44.08 4.30
5938 6504 1.392589 CCCAGGCAGCGATTTTATGT 58.607 50.000 0.00 0.00 0.00 2.29
6007 6577 2.980105 TTTTTAACGCGCCTGGGGGT 62.980 55.000 5.73 6.02 34.45 4.95
6054 6647 0.389426 GGCCGAACTTCGCTGAACTA 60.389 55.000 5.61 0.00 38.82 2.24
6060 6653 0.958822 AAATTTGGCCGAACTTCGCT 59.041 45.000 7.84 0.00 38.82 4.93
6104 6710 8.678199 TGTATGTAATGAAAATCCGCAAACATA 58.322 29.630 0.00 0.00 31.43 2.29
6160 6787 1.513586 GGTGACTACTCGGCGTTCG 60.514 63.158 6.85 0.00 40.90 3.95
6272 6929 2.127496 GACGACAGCGACGACGAA 60.127 61.111 12.29 0.00 42.66 3.85
6443 7233 3.173240 GCTCGCGTCGGTGAAGAC 61.173 66.667 5.77 0.00 37.76 3.01
6444 7234 4.415332 GGCTCGCGTCGGTGAAGA 62.415 66.667 5.77 0.00 31.08 2.87
6460 7250 4.078516 GTGAAGACGGGGTCGGGG 62.079 72.222 0.00 0.00 41.39 5.73
6461 7251 4.078516 GGTGAAGACGGGGTCGGG 62.079 72.222 0.00 0.00 41.39 5.14
6462 7252 4.430765 CGGTGAAGACGGGGTCGG 62.431 72.222 0.00 0.00 41.39 4.79
6463 7253 3.367743 TCGGTGAAGACGGGGTCG 61.368 66.667 0.00 0.00 37.67 4.79
6464 7254 2.260743 GTCGGTGAAGACGGGGTC 59.739 66.667 0.00 0.00 0.00 4.46
6470 7260 3.173240 GCTCGCGTCGGTGAAGAC 61.173 66.667 5.77 0.00 37.76 3.01
6471 7261 4.415332 GGCTCGCGTCGGTGAAGA 62.415 66.667 5.77 0.00 31.08 2.87
6486 7276 3.706373 TGAAGACTGAGCCGGGGC 61.706 66.667 2.18 0.18 42.33 5.80
6487 7277 2.266055 GTGAAGACTGAGCCGGGG 59.734 66.667 2.18 0.00 0.00 5.73
6488 7278 2.266055 GGTGAAGACTGAGCCGGG 59.734 66.667 2.18 0.00 0.00 5.73
6489 7279 2.125912 CGGTGAAGACTGAGCCGG 60.126 66.667 0.00 0.00 38.86 6.13
6490 7280 2.125912 CCGGTGAAGACTGAGCCG 60.126 66.667 0.00 0.00 41.82 5.52
6491 7281 2.435059 GCCGGTGAAGACTGAGCC 60.435 66.667 1.90 0.00 0.00 4.70
6523 7313 4.421479 CTCGCGCCGGTGAAGACT 62.421 66.667 21.76 0.00 31.08 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.