Multiple sequence alignment - TraesCS5B01G418900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G418900 chr5B 100.000 4288 0 0 1 4288 594912710 594908423 0.000000e+00 7919.0
1 TraesCS5B01G418900 chr5B 97.674 43 1 0 2418 2460 594910248 594910290 1.650000e-09 75.0
2 TraesCS5B01G418900 chr5A 88.353 1700 125 43 734 2415 605163578 605161934 0.000000e+00 1975.0
3 TraesCS5B01G418900 chr5A 92.943 836 53 4 2458 3289 605161933 605161100 0.000000e+00 1212.0
4 TraesCS5B01G418900 chr5A 81.139 843 87 29 3473 4288 605160977 605160180 1.020000e-170 610.0
5 TraesCS5B01G418900 chr5A 82.857 665 88 18 24 671 605222464 605221809 1.340000e-159 573.0
6 TraesCS5B01G418900 chr5D 88.426 1391 110 28 1981 3353 483705337 483703980 0.000000e+00 1629.0
7 TraesCS5B01G418900 chr5D 89.503 1248 79 26 721 1960 483706518 483705315 0.000000e+00 1531.0
8 TraesCS5B01G418900 chr5D 84.370 659 83 16 24 671 483707830 483707181 2.810000e-176 628.0
9 TraesCS5B01G418900 chr5D 84.518 394 30 13 3895 4285 483703338 483702973 1.130000e-95 361.0
10 TraesCS5B01G418900 chr1A 95.455 44 1 1 2418 2460 419035873 419035830 7.690000e-08 69.4
11 TraesCS5B01G418900 chr1A 97.500 40 1 0 2421 2460 419035830 419035869 7.690000e-08 69.4
12 TraesCS5B01G418900 chr2B 94.286 35 2 0 2411 2445 603660154 603660120 2.000000e-03 54.7
13 TraesCS5B01G418900 chr1B 96.875 32 1 0 2436 2467 509151128 509151159 2.000000e-03 54.7
14 TraesCS5B01G418900 chr6D 96.774 31 1 0 2415 2445 78275870 78275840 8.000000e-03 52.8
15 TraesCS5B01G418900 chr4B 96.774 31 1 0 2415 2445 103890059 103890029 8.000000e-03 52.8
16 TraesCS5B01G418900 chr2D 100.000 28 0 0 2415 2442 645945829 645945856 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G418900 chr5B 594908423 594912710 4287 True 7919.000000 7919 100.000000 1 4288 1 chr5B.!!$R1 4287
1 TraesCS5B01G418900 chr5A 605160180 605163578 3398 True 1265.666667 1975 87.478333 734 4288 3 chr5A.!!$R2 3554
2 TraesCS5B01G418900 chr5A 605221809 605222464 655 True 573.000000 573 82.857000 24 671 1 chr5A.!!$R1 647
3 TraesCS5B01G418900 chr5D 483702973 483707830 4857 True 1037.250000 1629 86.704250 24 4285 4 chr5D.!!$R1 4261

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
677 694 0.177836 ACGTTGGGCATCATGATCGA 59.822 50.0 16.36 0.00 0.00 3.59 F
1343 1986 0.109597 CAGTTGCTCCAATTGGCGTC 60.110 55.0 20.33 10.35 34.44 5.19 F
2240 2890 0.318441 TGCTTCAGGACTTCACTCCG 59.682 55.0 0.00 0.00 35.20 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1505 2148 0.696501 ACCAGTAAAATGCCCTCCGT 59.303 50.0 0.00 0.0 0.00 4.69 R
2786 3461 0.038343 CCTGGAAACAACATTGCCCG 60.038 55.0 0.00 0.0 42.06 6.13 R
4028 4907 0.022853 CGTTTCGTGGTATTCGACGC 59.977 55.0 2.04 0.0 43.48 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.367992 TTGTTCATGTCAGCGCAATTT 57.632 38.095 11.47 0.00 0.00 1.82
21 22 4.495911 TTGTTCATGTCAGCGCAATTTA 57.504 36.364 11.47 0.00 0.00 1.40
22 23 4.082274 TGTTCATGTCAGCGCAATTTAG 57.918 40.909 11.47 0.00 0.00 1.85
48 49 6.231211 ACCATCACTACTAACTTCACAAAGG 58.769 40.000 0.00 0.00 36.78 3.11
124 130 4.464008 TCAGGTTTTCTGTCTTGCAATCT 58.536 39.130 0.00 0.00 43.76 2.40
165 171 7.148018 ACCAACAATAGTTTGATCATCCATCAC 60.148 37.037 0.00 0.00 41.56 3.06
166 172 7.067859 CCAACAATAGTTTGATCATCCATCACT 59.932 37.037 0.00 0.00 41.56 3.41
169 175 9.857656 ACAATAGTTTGATCATCCATCACTAAT 57.142 29.630 0.00 0.00 41.56 1.73
209 215 2.009774 CTCCTAACTCAAATGCCACCG 58.990 52.381 0.00 0.00 0.00 4.94
229 235 2.154462 GCATTATGCGCATAACCCTCT 58.846 47.619 37.61 22.77 36.24 3.69
255 262 7.745717 TCATAAGTAGGGAAAATAGGGTGATG 58.254 38.462 0.00 0.00 0.00 3.07
261 268 4.478317 AGGGAAAATAGGGTGATGATGACA 59.522 41.667 0.00 0.00 0.00 3.58
265 272 7.054124 GGAAAATAGGGTGATGATGACAAGTA 58.946 38.462 0.00 0.00 0.00 2.24
275 282 4.487714 TGATGACAAGTAATCACCCTCC 57.512 45.455 0.00 0.00 0.00 4.30
276 283 3.118775 TGATGACAAGTAATCACCCTCCG 60.119 47.826 0.00 0.00 0.00 4.63
277 284 2.253610 TGACAAGTAATCACCCTCCGT 58.746 47.619 0.00 0.00 0.00 4.69
279 286 1.278127 ACAAGTAATCACCCTCCGTGG 59.722 52.381 0.00 0.00 43.23 4.94
280 287 1.553248 CAAGTAATCACCCTCCGTGGA 59.447 52.381 0.00 0.00 43.23 4.02
281 288 1.486211 AGTAATCACCCTCCGTGGAG 58.514 55.000 9.02 9.02 43.23 3.86
282 289 1.192428 GTAATCACCCTCCGTGGAGT 58.808 55.000 14.57 0.00 43.23 3.85
283 290 2.024655 AGTAATCACCCTCCGTGGAGTA 60.025 50.000 14.57 0.00 43.23 2.59
284 291 1.486211 AATCACCCTCCGTGGAGTAG 58.514 55.000 14.57 8.17 43.23 2.57
285 292 0.629596 ATCACCCTCCGTGGAGTAGA 59.370 55.000 14.57 9.34 43.23 2.59
286 293 0.323178 TCACCCTCCGTGGAGTAGAC 60.323 60.000 14.57 0.00 43.23 2.59
290 300 1.171308 CCTCCGTGGAGTAGACGAAA 58.829 55.000 14.57 0.00 40.44 3.46
300 310 5.067413 GTGGAGTAGACGAAACATAGATCCA 59.933 44.000 0.00 0.00 0.00 3.41
307 317 6.942976 AGACGAAACATAGATCCAAACCTTA 58.057 36.000 0.00 0.00 0.00 2.69
311 321 6.456988 CGAAACATAGATCCAAACCTTAGTGC 60.457 42.308 0.00 0.00 0.00 4.40
313 323 5.675538 ACATAGATCCAAACCTTAGTGCTC 58.324 41.667 0.00 0.00 0.00 4.26
314 324 5.189736 ACATAGATCCAAACCTTAGTGCTCA 59.810 40.000 0.00 0.00 0.00 4.26
349 359 6.126968 TGAGCTTCAAGATCAGGATGTCATTA 60.127 38.462 0.00 0.00 35.46 1.90
352 362 8.435187 AGCTTCAAGATCAGGATGTCATTATTA 58.565 33.333 0.00 0.00 37.40 0.98
371 381 7.572523 TTATTATTCAAGCCATGGAACTCTG 57.427 36.000 18.40 4.28 0.00 3.35
421 432 2.338577 CTCCCTAGCAATGAACCTGG 57.661 55.000 0.00 0.00 0.00 4.45
422 433 0.918983 TCCCTAGCAATGAACCTGGG 59.081 55.000 0.00 0.00 34.76 4.45
427 441 1.767759 AGCAATGAACCTGGGTATGC 58.232 50.000 8.20 8.20 0.00 3.14
463 477 1.406898 CGAGCATACTCTTGAGCCTCA 59.593 52.381 0.00 0.00 41.09 3.86
481 496 3.119029 CCTCAAGCTCCTCAGAAGAAGAG 60.119 52.174 0.00 0.00 35.77 2.85
493 508 6.046290 TCAGAAGAAGAGCTTTGATCATCA 57.954 37.500 0.00 0.00 36.83 3.07
508 523 3.986996 TCATCAGCTTGAATGACCTCA 57.013 42.857 0.00 0.00 0.00 3.86
509 524 3.870274 TCATCAGCTTGAATGACCTCAG 58.130 45.455 0.00 0.00 0.00 3.35
510 525 3.516700 TCATCAGCTTGAATGACCTCAGA 59.483 43.478 0.00 0.00 0.00 3.27
511 526 3.325293 TCAGCTTGAATGACCTCAGAC 57.675 47.619 0.00 0.00 0.00 3.51
512 527 2.634453 TCAGCTTGAATGACCTCAGACA 59.366 45.455 0.00 0.00 0.00 3.41
576 591 4.348863 ACTATGTTGGCTCATCCTCATC 57.651 45.455 0.00 0.00 34.18 2.92
577 592 2.251409 ATGTTGGCTCATCCTCATCG 57.749 50.000 0.00 0.00 35.26 3.84
583 598 0.530650 GCTCATCCTCATCGGCGAAA 60.531 55.000 15.93 4.16 0.00 3.46
584 599 1.939974 CTCATCCTCATCGGCGAAAA 58.060 50.000 15.93 3.74 0.00 2.29
585 600 2.487934 CTCATCCTCATCGGCGAAAAT 58.512 47.619 15.93 0.00 0.00 1.82
587 602 1.265095 CATCCTCATCGGCGAAAATGG 59.735 52.381 15.93 14.03 0.00 3.16
589 604 1.375853 CCTCATCGGCGAAAATGGCA 61.376 55.000 15.93 0.00 0.00 4.92
590 605 0.664761 CTCATCGGCGAAAATGGCAT 59.335 50.000 15.93 0.00 0.00 4.40
593 608 0.817013 ATCGGCGAAAATGGCATTGT 59.183 45.000 15.93 8.32 0.00 2.71
601 616 0.899717 AAATGGCATTGTCCGGCACT 60.900 50.000 14.47 0.00 42.25 4.40
608 623 0.392998 ATTGTCCGGCACTGTCATCC 60.393 55.000 0.00 0.00 0.00 3.51
612 627 1.066430 GTCCGGCACTGTCATCCTTTA 60.066 52.381 0.00 0.00 0.00 1.85
613 628 1.837439 TCCGGCACTGTCATCCTTTAT 59.163 47.619 0.00 0.00 0.00 1.40
614 629 1.942657 CCGGCACTGTCATCCTTTATG 59.057 52.381 0.00 0.00 36.88 1.90
616 631 1.678101 GGCACTGTCATCCTTTATGGC 59.322 52.381 0.00 0.00 40.84 4.40
618 633 2.684927 GCACTGTCATCCTTTATGGCCT 60.685 50.000 3.32 0.00 39.62 5.19
620 635 3.379372 CACTGTCATCCTTTATGGCCTTG 59.621 47.826 3.32 0.00 39.62 3.61
622 637 3.620488 TGTCATCCTTTATGGCCTTGTC 58.380 45.455 3.32 0.00 39.62 3.18
623 638 2.614057 GTCATCCTTTATGGCCTTGTCG 59.386 50.000 3.32 0.00 33.84 4.35
624 639 1.949525 CATCCTTTATGGCCTTGTCGG 59.050 52.381 3.32 0.00 35.26 4.79
628 645 3.023832 CCTTTATGGCCTTGTCGGAATT 58.976 45.455 3.32 0.00 33.16 2.17
633 650 1.154225 GCCTTGTCGGAATTGTGCG 60.154 57.895 0.00 0.00 40.45 5.34
659 676 0.404426 ACCTAGTGGGCCAAAAGGAC 59.596 55.000 31.89 11.39 39.10 3.85
671 688 1.545582 CAAAAGGACGTTGGGCATCAT 59.454 47.619 0.00 0.00 0.00 2.45
672 689 1.176527 AAAGGACGTTGGGCATCATG 58.823 50.000 0.00 0.00 0.00 3.07
674 691 0.548031 AGGACGTTGGGCATCATGAT 59.452 50.000 1.18 1.18 0.00 2.45
677 694 0.177836 ACGTTGGGCATCATGATCGA 59.822 50.000 16.36 0.00 0.00 3.59
679 696 1.807755 CGTTGGGCATCATGATCGAGT 60.808 52.381 4.86 0.00 0.00 4.18
680 697 1.869767 GTTGGGCATCATGATCGAGTC 59.130 52.381 4.86 0.00 0.00 3.36
682 699 0.321122 GGGCATCATGATCGAGTCCC 60.321 60.000 4.86 7.83 0.00 4.46
684 701 1.506493 GCATCATGATCGAGTCCCAC 58.494 55.000 4.86 0.00 0.00 4.61
685 702 1.202568 GCATCATGATCGAGTCCCACA 60.203 52.381 4.86 0.00 0.00 4.17
686 703 2.752121 CATCATGATCGAGTCCCACAG 58.248 52.381 4.86 0.00 0.00 3.66
687 704 1.852633 TCATGATCGAGTCCCACAGT 58.147 50.000 0.00 0.00 0.00 3.55
688 705 2.179427 TCATGATCGAGTCCCACAGTT 58.821 47.619 0.00 0.00 0.00 3.16
689 706 2.567169 TCATGATCGAGTCCCACAGTTT 59.433 45.455 0.00 0.00 0.00 2.66
690 707 3.767131 TCATGATCGAGTCCCACAGTTTA 59.233 43.478 0.00 0.00 0.00 2.01
692 709 4.610605 TGATCGAGTCCCACAGTTTAAA 57.389 40.909 0.00 0.00 0.00 1.52
693 710 4.963373 TGATCGAGTCCCACAGTTTAAAA 58.037 39.130 0.00 0.00 0.00 1.52
694 711 5.556915 TGATCGAGTCCCACAGTTTAAAAT 58.443 37.500 0.00 0.00 0.00 1.82
695 712 6.703319 TGATCGAGTCCCACAGTTTAAAATA 58.297 36.000 0.00 0.00 0.00 1.40
696 713 6.592607 TGATCGAGTCCCACAGTTTAAAATAC 59.407 38.462 0.00 0.00 0.00 1.89
697 714 5.240121 TCGAGTCCCACAGTTTAAAATACC 58.760 41.667 0.00 0.00 0.00 2.73
698 715 4.092383 CGAGTCCCACAGTTTAAAATACCG 59.908 45.833 0.00 0.00 0.00 4.02
699 716 4.329392 AGTCCCACAGTTTAAAATACCGG 58.671 43.478 0.00 0.00 0.00 5.28
700 717 3.083293 TCCCACAGTTTAAAATACCGGC 58.917 45.455 0.00 0.00 0.00 6.13
701 718 2.820787 CCCACAGTTTAAAATACCGGCA 59.179 45.455 0.00 0.00 0.00 5.69
702 719 3.445805 CCCACAGTTTAAAATACCGGCAT 59.554 43.478 0.00 0.00 0.00 4.40
703 720 4.081917 CCCACAGTTTAAAATACCGGCATT 60.082 41.667 0.00 0.00 0.00 3.56
704 721 4.862018 CCACAGTTTAAAATACCGGCATTG 59.138 41.667 0.00 0.00 0.00 2.82
705 722 5.336055 CCACAGTTTAAAATACCGGCATTGA 60.336 40.000 0.00 0.00 0.00 2.57
707 724 5.099575 CAGTTTAAAATACCGGCATTGACC 58.900 41.667 0.00 0.00 0.00 4.02
715 732 3.443045 GGCATTGACCGGTGGCTG 61.443 66.667 14.63 7.22 37.85 4.85
716 733 3.443045 GCATTGACCGGTGGCTGG 61.443 66.667 14.63 0.00 35.68 4.85
718 735 2.040544 CATTGACCGGTGGCTGGAC 61.041 63.158 14.63 0.00 33.36 4.02
719 736 2.525124 ATTGACCGGTGGCTGGACA 61.525 57.895 14.63 0.00 33.24 4.02
720 737 2.063015 ATTGACCGGTGGCTGGACAA 62.063 55.000 14.63 8.71 45.19 3.18
721 738 2.063015 TTGACCGGTGGCTGGACAAT 62.063 55.000 14.63 0.00 38.99 2.71
722 739 2.034066 ACCGGTGGCTGGACAATG 59.966 61.111 6.12 0.00 33.36 2.82
723 740 2.034066 CCGGTGGCTGGACAATGT 59.966 61.111 0.00 0.00 29.82 2.71
728 1355 2.722094 GGTGGCTGGACAATGTATCAA 58.278 47.619 0.00 0.00 0.00 2.57
729 1356 3.290710 GGTGGCTGGACAATGTATCAAT 58.709 45.455 0.00 0.00 0.00 2.57
732 1359 5.536161 GGTGGCTGGACAATGTATCAATAAT 59.464 40.000 0.00 0.00 0.00 1.28
792 1421 3.959293 TGTGGTGATTCGAGGTAGAGTA 58.041 45.455 0.00 0.00 0.00 2.59
793 1422 4.338012 TGTGGTGATTCGAGGTAGAGTAA 58.662 43.478 0.00 0.00 0.00 2.24
794 1423 4.768448 TGTGGTGATTCGAGGTAGAGTAAA 59.232 41.667 0.00 0.00 0.00 2.01
828 1458 8.200024 TGGAAAATGGTCCATCTTGAAATTTA 57.800 30.769 4.39 0.00 42.97 1.40
833 1463 8.496707 AATGGTCCATCTTGAAATTTAAATGC 57.503 30.769 4.39 0.00 0.00 3.56
834 1464 7.002250 TGGTCCATCTTGAAATTTAAATGCA 57.998 32.000 0.39 0.82 0.00 3.96
835 1465 7.448420 TGGTCCATCTTGAAATTTAAATGCAA 58.552 30.769 0.39 8.66 0.00 4.08
836 1466 7.935755 TGGTCCATCTTGAAATTTAAATGCAAA 59.064 29.630 14.17 8.53 0.00 3.68
858 1488 5.399052 AAGATTTCATCAGATCCCACCAT 57.601 39.130 0.00 0.00 0.00 3.55
1188 1823 4.083862 GGCGGAGAAGGGAAGCGT 62.084 66.667 0.00 0.00 0.00 5.07
1343 1986 0.109597 CAGTTGCTCCAATTGGCGTC 60.110 55.000 20.33 10.35 34.44 5.19
1505 2148 1.410050 TTGGTGAGCTGACCTCTGCA 61.410 55.000 23.48 0.00 42.33 4.41
1506 2149 1.375268 GGTGAGCTGACCTCTGCAC 60.375 63.158 15.96 2.04 42.33 4.57
1525 2169 1.094785 CGGAGGGCATTTTACTGGTG 58.905 55.000 0.00 0.00 0.00 4.17
1530 2174 1.892474 GGGCATTTTACTGGTGCTTCA 59.108 47.619 0.00 0.00 38.83 3.02
1552 2196 0.871592 CTGCGCGACTGCATAGCTTA 60.872 55.000 12.10 0.00 45.26 3.09
1553 2197 1.145759 TGCGCGACTGCATAGCTTAC 61.146 55.000 12.10 0.00 40.62 2.34
1573 2218 1.544982 CCTCATGTCATGGGATCCTGC 60.545 57.143 14.66 0.00 30.24 4.85
1585 2230 0.527385 GATCCTGCGTGCTCTCTGTC 60.527 60.000 0.00 0.00 0.00 3.51
1698 2343 4.096833 GCATTTCAATGAGGTATGCAGTGA 59.903 41.667 16.62 0.00 40.86 3.41
1718 2365 5.514279 GTGAAACTCATGGTCAGTTTTGAG 58.486 41.667 11.16 0.00 42.84 3.02
1729 2376 9.173021 CATGGTCAGTTTTGAGTTTATACCATA 57.827 33.333 0.00 0.00 31.91 2.74
1734 2381 9.104965 TCAGTTTTGAGTTTATACCATAATCCG 57.895 33.333 0.00 0.00 0.00 4.18
1738 2385 8.795842 TTTGAGTTTATACCATAATCCGTTGT 57.204 30.769 0.00 0.00 0.00 3.32
1739 2386 7.780008 TGAGTTTATACCATAATCCGTTGTG 57.220 36.000 0.00 0.00 0.00 3.33
1740 2387 6.259167 TGAGTTTATACCATAATCCGTTGTGC 59.741 38.462 0.00 0.00 0.00 4.57
1741 2388 5.529800 AGTTTATACCATAATCCGTTGTGCC 59.470 40.000 0.00 0.00 0.00 5.01
1742 2389 3.857157 ATACCATAATCCGTTGTGCCT 57.143 42.857 0.00 0.00 0.00 4.75
1743 2390 1.750193 ACCATAATCCGTTGTGCCTG 58.250 50.000 0.00 0.00 0.00 4.85
1744 2391 1.280710 ACCATAATCCGTTGTGCCTGA 59.719 47.619 0.00 0.00 0.00 3.86
1745 2392 2.290641 ACCATAATCCGTTGTGCCTGAA 60.291 45.455 0.00 0.00 0.00 3.02
1746 2393 2.355756 CCATAATCCGTTGTGCCTGAAG 59.644 50.000 0.00 0.00 0.00 3.02
1747 2394 2.851263 TAATCCGTTGTGCCTGAAGT 57.149 45.000 0.00 0.00 0.00 3.01
1748 2395 2.851263 AATCCGTTGTGCCTGAAGTA 57.149 45.000 0.00 0.00 0.00 2.24
1749 2396 3.350219 AATCCGTTGTGCCTGAAGTAT 57.650 42.857 0.00 0.00 0.00 2.12
1750 2397 2.093306 TCCGTTGTGCCTGAAGTATG 57.907 50.000 0.00 0.00 0.00 2.39
1751 2398 1.621317 TCCGTTGTGCCTGAAGTATGA 59.379 47.619 0.00 0.00 0.00 2.15
1752 2399 2.236146 TCCGTTGTGCCTGAAGTATGAT 59.764 45.455 0.00 0.00 0.00 2.45
1753 2400 2.609459 CCGTTGTGCCTGAAGTATGATC 59.391 50.000 0.00 0.00 0.00 2.92
1754 2401 2.609459 CGTTGTGCCTGAAGTATGATCC 59.391 50.000 0.00 0.00 0.00 3.36
1755 2402 2.602257 TGTGCCTGAAGTATGATCCG 57.398 50.000 0.00 0.00 0.00 4.18
1756 2403 1.831106 TGTGCCTGAAGTATGATCCGT 59.169 47.619 0.00 0.00 0.00 4.69
1757 2404 2.236146 TGTGCCTGAAGTATGATCCGTT 59.764 45.455 0.00 0.00 0.00 4.44
1758 2405 2.609459 GTGCCTGAAGTATGATCCGTTG 59.391 50.000 0.00 0.00 0.00 4.10
1771 2418 2.169832 TCCGTTGAGCCTGAAAAGAG 57.830 50.000 0.00 0.00 0.00 2.85
1772 2419 1.416401 TCCGTTGAGCCTGAAAAGAGT 59.584 47.619 0.00 0.00 0.00 3.24
1774 2421 3.070446 TCCGTTGAGCCTGAAAAGAGTTA 59.930 43.478 0.00 0.00 0.00 2.24
1775 2422 4.003648 CCGTTGAGCCTGAAAAGAGTTAT 58.996 43.478 0.00 0.00 0.00 1.89
1776 2423 4.093556 CCGTTGAGCCTGAAAAGAGTTATC 59.906 45.833 0.00 0.00 0.00 1.75
1777 2424 4.093556 CGTTGAGCCTGAAAAGAGTTATCC 59.906 45.833 0.00 0.00 0.00 2.59
1778 2425 5.249420 GTTGAGCCTGAAAAGAGTTATCCT 58.751 41.667 0.00 0.00 0.00 3.24
1779 2426 5.091261 TGAGCCTGAAAAGAGTTATCCTC 57.909 43.478 0.00 0.00 40.80 3.71
1780 2427 4.532126 TGAGCCTGAAAAGAGTTATCCTCA 59.468 41.667 0.00 0.00 43.12 3.86
1781 2428 5.096443 AGCCTGAAAAGAGTTATCCTCAG 57.904 43.478 0.00 0.00 43.12 3.35
1792 2439 5.541868 AGAGTTATCCTCAGTCCATACATGG 59.458 44.000 1.51 1.51 45.01 3.66
1825 2472 8.610248 TCTAGACTAATGAAGAGTTATCCTCG 57.390 38.462 0.00 0.00 45.44 4.63
1826 2473 6.642707 AGACTAATGAAGAGTTATCCTCGG 57.357 41.667 0.00 0.00 45.44 4.63
1832 2479 4.030913 TGAAGAGTTATCCTCGGTCCATT 58.969 43.478 0.00 0.00 45.44 3.16
1847 2494 3.057946 GGTCCATTCAGCTTCTGTTGTTC 60.058 47.826 0.00 0.00 32.61 3.18
1869 2516 0.661187 CGCACACAGTGATGTTTGCC 60.661 55.000 7.81 0.00 41.03 4.52
2010 2659 7.751732 TGTCGATGATTCATTTTAAACTGGAG 58.248 34.615 0.00 0.00 0.00 3.86
2055 2704 2.019984 GAGCCAGTAGCCCATTTTCTG 58.980 52.381 0.00 0.00 45.47 3.02
2106 2755 4.843516 TGTATGGATGTAGGGCATGATACA 59.156 41.667 0.00 2.46 37.28 2.29
2240 2890 0.318441 TGCTTCAGGACTTCACTCCG 59.682 55.000 0.00 0.00 35.20 4.63
2353 3003 7.881775 AGGTCATTCAGTTTAAACTCACTTT 57.118 32.000 18.00 0.00 37.08 2.66
2430 3096 8.842358 TTTTTAAAGTACATGTACTCCCTCTG 57.158 34.615 33.02 0.00 44.96 3.35
2431 3097 7.549147 TTTAAAGTACATGTACTCCCTCTGT 57.451 36.000 33.02 16.71 44.96 3.41
2432 3098 8.654485 TTTAAAGTACATGTACTCCCTCTGTA 57.346 34.615 33.02 16.17 44.96 2.74
2433 3099 8.654485 TTAAAGTACATGTACTCCCTCTGTAA 57.346 34.615 33.02 19.73 44.96 2.41
2434 3100 7.549147 AAAGTACATGTACTCCCTCTGTAAA 57.451 36.000 33.02 0.00 44.96 2.01
2435 3101 6.527057 AGTACATGTACTCCCTCTGTAAAC 57.473 41.667 28.97 5.19 42.30 2.01
2436 3102 6.254522 AGTACATGTACTCCCTCTGTAAACT 58.745 40.000 28.97 7.44 42.30 2.66
2437 3103 7.408543 AGTACATGTACTCCCTCTGTAAACTA 58.591 38.462 28.97 0.00 42.30 2.24
2438 3104 7.892241 AGTACATGTACTCCCTCTGTAAACTAA 59.108 37.037 28.97 0.00 42.30 2.24
2439 3105 7.735326 ACATGTACTCCCTCTGTAAACTAAT 57.265 36.000 0.00 0.00 0.00 1.73
2440 3106 8.834004 ACATGTACTCCCTCTGTAAACTAATA 57.166 34.615 0.00 0.00 0.00 0.98
2441 3107 9.435570 ACATGTACTCCCTCTGTAAACTAATAT 57.564 33.333 0.00 0.00 0.00 1.28
2546 3212 3.306166 GCTGCTAATCAAATGCTTGCAAG 59.694 43.478 22.44 22.44 32.14 4.01
2583 3249 6.348295 GCATATGTAGAAAGATGCTCACCATG 60.348 42.308 4.29 0.00 41.19 3.66
2695 3362 3.454447 TCCAGTTCTGGTTCTCTTTGACA 59.546 43.478 17.00 0.00 0.00 3.58
2726 3401 8.712285 TGTGCACCTATTAGTATAGTCAAAAC 57.288 34.615 15.69 0.00 33.29 2.43
2825 3500 0.251742 TTGGGCTCAAACCAGATGGG 60.252 55.000 0.00 0.00 39.57 4.00
2883 3558 7.112122 TGGTGAGCTTACTGTATCAAATGATT 58.888 34.615 8.70 0.00 36.05 2.57
2884 3559 7.280876 TGGTGAGCTTACTGTATCAAATGATTC 59.719 37.037 8.70 0.00 36.05 2.52
2885 3560 7.280876 GGTGAGCTTACTGTATCAAATGATTCA 59.719 37.037 8.70 2.09 36.05 2.57
2886 3561 8.119226 GTGAGCTTACTGTATCAAATGATTCAC 58.881 37.037 0.49 2.90 36.05 3.18
2887 3562 7.280876 TGAGCTTACTGTATCAAATGATTCACC 59.719 37.037 0.55 0.00 36.05 4.02
2899 3577 6.209192 TCAAATGATTCACCTTGTTACTGCAT 59.791 34.615 9.14 0.00 0.00 3.96
2922 3600 8.335356 GCATCAGCTGTATTTTACGATAGAAAA 58.665 33.333 14.67 0.00 37.59 2.29
2933 3613 4.685169 ACGATAGAAAAGCACCATGTTG 57.315 40.909 0.00 0.00 41.38 3.33
2938 3621 6.455646 CGATAGAAAAGCACCATGTTGTACTC 60.456 42.308 0.00 0.00 39.76 2.59
2942 3625 5.789643 AAAGCACCATGTTGTACTCATTT 57.210 34.783 0.00 0.00 0.00 2.32
2943 3626 4.771590 AGCACCATGTTGTACTCATTTG 57.228 40.909 0.00 1.16 0.00 2.32
2947 3630 5.508825 GCACCATGTTGTACTCATTTGGAAA 60.509 40.000 13.87 0.00 0.00 3.13
2948 3631 6.690530 CACCATGTTGTACTCATTTGGAAAT 58.309 36.000 13.87 0.00 0.00 2.17
2949 3632 7.153985 CACCATGTTGTACTCATTTGGAAATT 58.846 34.615 13.87 0.00 0.00 1.82
2980 3663 9.023967 GTAATATTTGCATTGTCAGGATTTGTC 57.976 33.333 0.00 0.00 0.00 3.18
3101 3784 5.841810 TCTCGCAAAATGACAAATTTTCCT 58.158 33.333 0.00 0.00 0.00 3.36
3143 3826 5.263599 TCCATTTGTCAGCCACATAATCTT 58.736 37.500 0.00 0.00 33.90 2.40
3273 3956 2.160813 CGACCTAAAAATTCACCCCGTG 59.839 50.000 0.00 0.00 34.45 4.94
3282 3965 2.839043 TTCACCCCGTGTAATCCGCG 62.839 60.000 0.00 0.00 46.49 6.46
3289 3986 0.440758 CGTGTAATCCGCGCTTGAAA 59.559 50.000 5.56 0.00 40.62 2.69
3290 3987 1.785518 CGTGTAATCCGCGCTTGAAAC 60.786 52.381 5.56 5.86 40.62 2.78
3291 3988 1.195900 GTGTAATCCGCGCTTGAAACA 59.804 47.619 5.56 8.33 0.00 2.83
3292 3989 1.195900 TGTAATCCGCGCTTGAAACAC 59.804 47.619 5.56 2.81 0.00 3.32
3293 3990 0.800012 TAATCCGCGCTTGAAACACC 59.200 50.000 5.56 0.00 0.00 4.16
3294 3991 1.862602 AATCCGCGCTTGAAACACCC 61.863 55.000 5.56 0.00 0.00 4.61
3295 3992 4.038080 CCGCGCTTGAAACACCCC 62.038 66.667 5.56 0.00 0.00 4.95
3296 3993 3.283684 CGCGCTTGAAACACCCCA 61.284 61.111 5.56 0.00 0.00 4.96
3297 3994 2.644992 GCGCTTGAAACACCCCAG 59.355 61.111 0.00 0.00 0.00 4.45
3299 3996 1.949257 CGCTTGAAACACCCCAGAC 59.051 57.895 0.00 0.00 0.00 3.51
3300 3997 0.535102 CGCTTGAAACACCCCAGACT 60.535 55.000 0.00 0.00 0.00 3.24
3301 3998 1.270625 CGCTTGAAACACCCCAGACTA 60.271 52.381 0.00 0.00 0.00 2.59
3302 3999 2.808933 CGCTTGAAACACCCCAGACTAA 60.809 50.000 0.00 0.00 0.00 2.24
3303 4000 2.814336 GCTTGAAACACCCCAGACTAAG 59.186 50.000 0.00 0.00 0.00 2.18
3304 4001 2.561478 TGAAACACCCCAGACTAAGC 57.439 50.000 0.00 0.00 0.00 3.09
3305 4002 1.771854 TGAAACACCCCAGACTAAGCA 59.228 47.619 0.00 0.00 0.00 3.91
3306 4003 2.224523 TGAAACACCCCAGACTAAGCAG 60.225 50.000 0.00 0.00 0.00 4.24
3307 4004 1.729586 AACACCCCAGACTAAGCAGA 58.270 50.000 0.00 0.00 0.00 4.26
3308 4005 0.977395 ACACCCCAGACTAAGCAGAC 59.023 55.000 0.00 0.00 0.00 3.51
3319 4016 0.108396 TAAGCAGACTTGTGCCAGCA 59.892 50.000 0.00 0.00 45.20 4.41
3322 4019 1.064906 AGCAGACTTGTGCCAGCATAT 60.065 47.619 0.00 0.00 45.20 1.78
3330 4027 3.070476 TGTGCCAGCATATTTGTCTGA 57.930 42.857 0.00 0.00 32.24 3.27
3356 4053 8.053411 CAATGTATTGTTGTTGACTTGTCTTG 57.947 34.615 2.35 0.00 33.22 3.02
3360 4057 5.957842 TTGTTGTTGACTTGTCTTGAGTT 57.042 34.783 2.35 0.00 0.00 3.01
3361 4058 5.545658 TGTTGTTGACTTGTCTTGAGTTC 57.454 39.130 2.35 0.00 0.00 3.01
3365 4062 5.192927 TGTTGACTTGTCTTGAGTTCCAAT 58.807 37.500 2.35 0.00 33.68 3.16
3366 4063 5.296780 TGTTGACTTGTCTTGAGTTCCAATC 59.703 40.000 2.35 0.00 33.68 2.67
3367 4064 5.034852 TGACTTGTCTTGAGTTCCAATCA 57.965 39.130 2.35 0.00 33.68 2.57
3368 4065 4.816385 TGACTTGTCTTGAGTTCCAATCAC 59.184 41.667 2.35 0.00 33.68 3.06
3369 4066 4.780815 ACTTGTCTTGAGTTCCAATCACA 58.219 39.130 0.00 0.00 33.68 3.58
3370 4067 4.818546 ACTTGTCTTGAGTTCCAATCACAG 59.181 41.667 0.00 0.00 32.39 3.66
3371 4068 4.687901 TGTCTTGAGTTCCAATCACAGA 57.312 40.909 0.00 0.00 33.68 3.41
3372 4069 5.034852 TGTCTTGAGTTCCAATCACAGAA 57.965 39.130 0.00 0.00 33.68 3.02
3373 4070 5.436175 TGTCTTGAGTTCCAATCACAGAAA 58.564 37.500 0.00 0.00 33.68 2.52
3374 4071 5.885352 TGTCTTGAGTTCCAATCACAGAAAA 59.115 36.000 0.00 0.00 33.68 2.29
3375 4072 6.547141 TGTCTTGAGTTCCAATCACAGAAAAT 59.453 34.615 0.00 0.00 33.68 1.82
3376 4073 7.068593 TGTCTTGAGTTCCAATCACAGAAAATT 59.931 33.333 0.00 0.00 33.68 1.82
3377 4074 7.922811 GTCTTGAGTTCCAATCACAGAAAATTT 59.077 33.333 0.00 0.00 33.68 1.82
3378 4075 8.137437 TCTTGAGTTCCAATCACAGAAAATTTC 58.863 33.333 0.00 0.00 33.68 2.17
3379 4076 7.345422 TGAGTTCCAATCACAGAAAATTTCA 57.655 32.000 8.55 0.00 0.00 2.69
3380 4077 7.428020 TGAGTTCCAATCACAGAAAATTTCAG 58.572 34.615 8.55 2.41 0.00 3.02
3381 4078 7.285172 TGAGTTCCAATCACAGAAAATTTCAGA 59.715 33.333 8.55 3.58 0.00 3.27
3382 4079 7.428826 AGTTCCAATCACAGAAAATTTCAGAC 58.571 34.615 8.55 0.00 0.00 3.51
3383 4080 6.957920 TCCAATCACAGAAAATTTCAGACA 57.042 33.333 8.55 0.00 0.00 3.41
3384 4081 7.528996 TCCAATCACAGAAAATTTCAGACAT 57.471 32.000 8.55 0.00 0.00 3.06
3385 4082 7.372714 TCCAATCACAGAAAATTTCAGACATG 58.627 34.615 8.55 0.00 0.00 3.21
3386 4083 6.090358 CCAATCACAGAAAATTTCAGACATGC 59.910 38.462 8.55 0.00 0.00 4.06
3390 4087 7.267128 TCACAGAAAATTTCAGACATGCTTTT 58.733 30.769 8.55 0.00 0.00 2.27
3412 4109 3.755378 TGCTTGGTGTGCATTTTGTTTTT 59.245 34.783 0.00 0.00 35.31 1.94
3413 4110 4.097012 GCTTGGTGTGCATTTTGTTTTTG 58.903 39.130 0.00 0.00 0.00 2.44
3415 4112 5.618640 GCTTGGTGTGCATTTTGTTTTTGAA 60.619 36.000 0.00 0.00 0.00 2.69
3416 4113 5.288543 TGGTGTGCATTTTGTTTTTGAAC 57.711 34.783 0.00 0.00 0.00 3.18
3417 4114 4.756642 TGGTGTGCATTTTGTTTTTGAACA 59.243 33.333 0.00 0.00 0.00 3.18
3419 4116 5.323105 GTGTGCATTTTGTTTTTGAACAGG 58.677 37.500 0.00 0.00 29.61 4.00
3420 4117 4.142730 TGTGCATTTTGTTTTTGAACAGGC 60.143 37.500 0.00 0.00 33.73 4.85
3421 4118 3.376546 TGCATTTTGTTTTTGAACAGGCC 59.623 39.130 0.00 0.00 33.73 5.19
3424 4121 5.392919 GCATTTTGTTTTTGAACAGGCCTTT 60.393 36.000 0.00 0.20 33.73 3.11
3425 4122 6.619744 CATTTTGTTTTTGAACAGGCCTTTT 58.380 32.000 0.00 1.66 33.73 2.27
3426 4123 5.619625 TTTGTTTTTGAACAGGCCTTTTG 57.380 34.783 9.38 0.00 33.73 2.44
3433 4130 4.817318 TGAACAGGCCTTTTGTTTTTCT 57.183 36.364 9.38 0.00 38.78 2.52
3440 4137 4.022849 AGGCCTTTTGTTTTTCTGAGATCG 60.023 41.667 0.00 0.00 0.00 3.69
3447 4144 7.452880 TTTGTTTTTCTGAGATCGAATCCAT 57.547 32.000 0.00 0.00 0.00 3.41
3448 4145 7.452880 TTGTTTTTCTGAGATCGAATCCATT 57.547 32.000 0.00 0.00 0.00 3.16
3449 4146 7.452880 TGTTTTTCTGAGATCGAATCCATTT 57.547 32.000 0.00 0.00 0.00 2.32
3450 4147 8.560355 TGTTTTTCTGAGATCGAATCCATTTA 57.440 30.769 0.00 0.00 0.00 1.40
3451 4148 9.177608 TGTTTTTCTGAGATCGAATCCATTTAT 57.822 29.630 0.00 0.00 0.00 1.40
3455 4152 8.962884 TTCTGAGATCGAATCCATTTATTTCA 57.037 30.769 0.00 0.00 0.00 2.69
3456 4153 8.599055 TCTGAGATCGAATCCATTTATTTCAG 57.401 34.615 0.00 0.00 32.32 3.02
3457 4154 7.172190 TCTGAGATCGAATCCATTTATTTCAGC 59.828 37.037 0.00 0.00 31.79 4.26
3458 4155 6.994496 TGAGATCGAATCCATTTATTTCAGCT 59.006 34.615 0.00 0.00 0.00 4.24
3459 4156 7.500227 TGAGATCGAATCCATTTATTTCAGCTT 59.500 33.333 0.00 0.00 0.00 3.74
3460 4157 8.230472 AGATCGAATCCATTTATTTCAGCTTT 57.770 30.769 0.00 0.00 0.00 3.51
3461 4158 8.689972 AGATCGAATCCATTTATTTCAGCTTTT 58.310 29.630 0.00 0.00 0.00 2.27
3462 4159 8.638685 ATCGAATCCATTTATTTCAGCTTTTG 57.361 30.769 0.00 0.00 0.00 2.44
3496 4193 9.551734 ACCTAGTTACTGTCGAAACTTAATTTT 57.448 29.630 5.60 0.00 37.19 1.82
3497 4194 9.807386 CCTAGTTACTGTCGAAACTTAATTTTG 57.193 33.333 5.60 0.00 37.19 2.44
3509 4206 7.645340 CGAAACTTAATTTTGATGGCATCTAGG 59.355 37.037 26.49 13.59 33.93 3.02
3511 4208 8.773033 AACTTAATTTTGATGGCATCTAGGAT 57.227 30.769 26.49 14.42 0.00 3.24
3516 4213 6.949352 TTTTGATGGCATCTAGGATCTTTC 57.051 37.500 26.49 0.00 0.00 2.62
3534 4231 0.541863 TCGATTCTGAAAGGGAGGGC 59.458 55.000 0.00 0.00 0.00 5.19
3535 4232 0.811616 CGATTCTGAAAGGGAGGGCG 60.812 60.000 0.00 0.00 0.00 6.13
3545 4242 2.266055 GGAGGGCGTCTGAACCAG 59.734 66.667 7.19 0.00 0.00 4.00
3550 4247 2.029844 GGCGTCTGAACCAGTGAGC 61.030 63.158 0.00 0.00 32.61 4.26
3552 4249 1.374758 CGTCTGAACCAGTGAGCCC 60.375 63.158 0.00 0.00 32.61 5.19
3572 4269 1.076485 ATGTGCTTCTGATGCCCCC 60.076 57.895 12.33 2.48 0.00 5.40
3578 4275 0.038744 CTTCTGATGCCCCCAACTGT 59.961 55.000 0.00 0.00 0.00 3.55
3598 4307 8.845227 CAACTGTCTGTAGATCTGTACTATGAT 58.155 37.037 5.18 0.00 0.00 2.45
3601 4310 6.651225 TGTCTGTAGATCTGTACTATGATCCG 59.349 42.308 5.18 6.96 39.72 4.18
3602 4311 6.651643 GTCTGTAGATCTGTACTATGATCCGT 59.348 42.308 5.18 6.08 39.72 4.69
3609 4318 9.961264 AGATCTGTACTATGATCCGTAGAATTA 57.039 33.333 15.35 0.00 39.72 1.40
3626 4335 6.645790 AGAATTATTGTGAATGAGATGGCC 57.354 37.500 0.00 0.00 0.00 5.36
3630 4339 0.462581 TGTGAATGAGATGGCCGAGC 60.463 55.000 0.00 0.00 0.00 5.03
3631 4340 0.462581 GTGAATGAGATGGCCGAGCA 60.463 55.000 0.00 0.00 0.00 4.26
3671 4388 6.889301 CAAGGTATTGCTGGATTGATGTAT 57.111 37.500 0.00 0.00 0.00 2.29
3672 4389 7.281040 CAAGGTATTGCTGGATTGATGTATT 57.719 36.000 0.00 0.00 0.00 1.89
3673 4390 7.719483 CAAGGTATTGCTGGATTGATGTATTT 58.281 34.615 0.00 0.00 0.00 1.40
3680 4397 5.068067 TGCTGGATTGATGTATTTCATGTGG 59.932 40.000 0.00 0.00 36.83 4.17
3688 4405 4.233632 TGTATTTCATGTGGGATCTGCA 57.766 40.909 0.00 0.00 0.00 4.41
3689 4406 4.201657 TGTATTTCATGTGGGATCTGCAG 58.798 43.478 7.63 7.63 0.00 4.41
3706 4423 0.172803 CAGCTGCAAGAATGGCTTCC 59.827 55.000 0.00 0.00 34.64 3.46
3708 4425 1.805254 CTGCAAGAATGGCTTCCGG 59.195 57.895 0.00 0.00 34.64 5.14
3718 4435 2.275380 GGCTTCCGGTTTGCCATGT 61.275 57.895 23.00 0.00 45.46 3.21
3726 4443 2.415893 CCGGTTTGCCATGTTTCTCATC 60.416 50.000 0.00 0.00 34.09 2.92
3741 4458 7.523219 TGTTTCTCATCGCGTAACATTATTTT 58.477 30.769 5.77 0.00 0.00 1.82
3742 4459 8.018520 TGTTTCTCATCGCGTAACATTATTTTT 58.981 29.630 5.77 0.00 0.00 1.94
3763 4480 8.645730 TTTTTACCGGAAAAATTACCTTGTTC 57.354 30.769 9.46 0.00 41.16 3.18
3765 4482 4.216708 ACCGGAAAAATTACCTTGTTCCA 58.783 39.130 9.46 0.00 38.10 3.53
3767 4484 5.305902 ACCGGAAAAATTACCTTGTTCCATT 59.694 36.000 9.46 0.00 38.10 3.16
3768 4485 6.183361 ACCGGAAAAATTACCTTGTTCCATTT 60.183 34.615 9.46 0.00 38.10 2.32
3804 4521 8.587608 ACAAGTTCATTTATTTCCATCACACAT 58.412 29.630 0.00 0.00 0.00 3.21
3831 4548 8.827677 GTTCAAGTTTGTACACACTCTTCTAAT 58.172 33.333 14.79 0.00 0.00 1.73
3832 4549 8.589335 TCAAGTTTGTACACACTCTTCTAATC 57.411 34.615 14.79 0.00 0.00 1.75
3833 4550 8.421784 TCAAGTTTGTACACACTCTTCTAATCT 58.578 33.333 14.79 0.00 0.00 2.40
3834 4551 9.692749 CAAGTTTGTACACACTCTTCTAATCTA 57.307 33.333 14.79 0.00 0.00 1.98
3839 4556 7.837863 TGTACACACTCTTCTAATCTAAAGGG 58.162 38.462 0.00 0.00 0.00 3.95
3851 4568 7.509546 TCTAATCTAAAGGGGCAAAGACTATG 58.490 38.462 0.00 0.00 0.00 2.23
3864 4588 5.698545 GCAAAGACTATGCGAATATCCTTCT 59.301 40.000 0.00 0.00 33.57 2.85
3875 4599 5.814705 GCGAATATCCTTCTGATATCCCTTG 59.185 44.000 0.00 0.00 44.27 3.61
3883 4607 5.455755 CCTTCTGATATCCCTTGATGCTGAA 60.456 44.000 0.00 0.00 32.18 3.02
3884 4608 5.837770 TCTGATATCCCTTGATGCTGAAT 57.162 39.130 0.00 0.00 32.18 2.57
3885 4609 6.196918 TCTGATATCCCTTGATGCTGAATT 57.803 37.500 0.00 0.00 32.18 2.17
3886 4610 6.002082 TCTGATATCCCTTGATGCTGAATTG 58.998 40.000 0.00 0.00 32.18 2.32
3888 4612 2.519771 TCCCTTGATGCTGAATTGCT 57.480 45.000 0.00 0.00 0.00 3.91
3889 4613 2.097036 TCCCTTGATGCTGAATTGCTG 58.903 47.619 0.00 0.00 0.00 4.41
3890 4614 2.097036 CCCTTGATGCTGAATTGCTGA 58.903 47.619 0.00 0.00 0.00 4.26
3893 4772 4.261489 CCCTTGATGCTGAATTGCTGATAC 60.261 45.833 0.00 0.00 0.00 2.24
3897 4776 3.770263 TGCTGAATTGCTGATACAAGC 57.230 42.857 0.00 0.00 43.82 4.01
3909 4788 4.511527 CTGATACAAGCCAACTCATGACT 58.488 43.478 0.00 0.00 0.00 3.41
3910 4789 4.256110 TGATACAAGCCAACTCATGACTG 58.744 43.478 0.00 0.00 0.00 3.51
3944 4823 1.202510 AGCATCTCGCACCATTCTCTC 60.203 52.381 0.00 0.00 46.13 3.20
3975 4854 6.404954 CCGACAACTAAAACCCAAAGAGAAAA 60.405 38.462 0.00 0.00 0.00 2.29
3991 4870 9.699985 CAAAGAGAAAAATGACAGAAGATATCG 57.300 33.333 0.00 0.00 0.00 2.92
4025 4904 8.606830 ACCAAGGAATATGACTATTTATCCTCC 58.393 37.037 0.00 0.00 0.00 4.30
4026 4905 8.830741 CCAAGGAATATGACTATTTATCCTCCT 58.169 37.037 0.00 0.00 0.00 3.69
4029 4908 9.207868 AGGAATATGACTATTTATCCTCCTAGC 57.792 37.037 0.00 0.00 0.00 3.42
4030 4909 8.138712 GGAATATGACTATTTATCCTCCTAGCG 58.861 40.741 0.00 0.00 0.00 4.26
4035 4914 5.068636 ACTATTTATCCTCCTAGCGTCGAA 58.931 41.667 0.00 0.00 0.00 3.71
4052 4931 4.262743 CGTCGAATACCACGAAACGAATAA 59.737 41.667 0.00 0.00 41.31 1.40
4103 4983 3.393800 ACCAAACGTCTTCACATCAGAG 58.606 45.455 0.00 0.00 0.00 3.35
4104 4984 2.158449 CCAAACGTCTTCACATCAGAGC 59.842 50.000 0.00 0.00 0.00 4.09
4199 5079 1.212195 CCTTGTCCCTAACCTAAGCCC 59.788 57.143 0.00 0.00 0.00 5.19
4213 5095 3.886505 CCTAAGCCCTACAGACTCTACTG 59.113 52.174 0.00 0.00 42.78 2.74
4247 5129 3.382855 GCAAAGAACATGTTCATGCACA 58.617 40.909 37.81 0.00 45.57 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.367992 AAATTGCGCTGACATGAACAA 57.632 38.095 9.73 0.00 0.00 2.83
1 2 3.750652 TCTAAATTGCGCTGACATGAACA 59.249 39.130 9.73 0.00 0.00 3.18
2 3 4.340894 TCTAAATTGCGCTGACATGAAC 57.659 40.909 9.73 0.00 0.00 3.18
3 4 4.379394 GGTTCTAAATTGCGCTGACATGAA 60.379 41.667 9.73 4.17 0.00 2.57
4 5 3.126858 GGTTCTAAATTGCGCTGACATGA 59.873 43.478 9.73 0.00 0.00 3.07
5 6 3.119884 TGGTTCTAAATTGCGCTGACATG 60.120 43.478 9.73 0.00 0.00 3.21
6 7 3.081061 TGGTTCTAAATTGCGCTGACAT 58.919 40.909 9.73 0.00 0.00 3.06
7 8 2.499197 TGGTTCTAAATTGCGCTGACA 58.501 42.857 9.73 0.00 0.00 3.58
8 9 3.126858 TGATGGTTCTAAATTGCGCTGAC 59.873 43.478 9.73 0.00 0.00 3.51
9 10 3.126858 GTGATGGTTCTAAATTGCGCTGA 59.873 43.478 9.73 0.00 0.00 4.26
10 11 3.127548 AGTGATGGTTCTAAATTGCGCTG 59.872 43.478 9.73 0.00 0.00 5.18
11 12 3.347216 AGTGATGGTTCTAAATTGCGCT 58.653 40.909 9.73 0.00 0.00 5.92
12 13 3.764885 AGTGATGGTTCTAAATTGCGC 57.235 42.857 0.00 0.00 0.00 6.09
13 14 7.277981 AGTTAGTAGTGATGGTTCTAAATTGCG 59.722 37.037 0.00 0.00 0.00 4.85
14 15 8.494016 AGTTAGTAGTGATGGTTCTAAATTGC 57.506 34.615 0.00 0.00 0.00 3.56
17 18 9.654663 GTGAAGTTAGTAGTGATGGTTCTAAAT 57.345 33.333 0.00 0.00 0.00 1.40
18 19 8.644216 TGTGAAGTTAGTAGTGATGGTTCTAAA 58.356 33.333 0.00 0.00 0.00 1.85
19 20 8.185506 TGTGAAGTTAGTAGTGATGGTTCTAA 57.814 34.615 0.00 0.00 0.00 2.10
20 21 7.770366 TGTGAAGTTAGTAGTGATGGTTCTA 57.230 36.000 0.00 0.00 0.00 2.10
21 22 6.665992 TGTGAAGTTAGTAGTGATGGTTCT 57.334 37.500 0.00 0.00 0.00 3.01
22 23 7.095187 CCTTTGTGAAGTTAGTAGTGATGGTTC 60.095 40.741 0.00 0.00 0.00 3.62
99 100 2.886523 TGCAAGACAGAAAACCTGATGG 59.113 45.455 0.00 0.00 45.78 3.51
111 117 3.842732 TGCATCAAGATTGCAAGACAG 57.157 42.857 4.94 0.00 35.46 3.51
124 130 1.340889 GTTGGTGGCTTCTTGCATCAA 59.659 47.619 0.00 0.00 45.15 2.57
133 139 4.846779 TCAAACTATTGTTGGTGGCTTC 57.153 40.909 0.00 0.00 37.79 3.86
136 142 4.782019 TGATCAAACTATTGTTGGTGGC 57.218 40.909 0.00 0.00 37.79 5.01
190 196 1.948611 GCGGTGGCATTTGAGTTAGGA 60.949 52.381 0.00 0.00 39.62 2.94
209 215 2.154462 AGAGGGTTATGCGCATAATGC 58.846 47.619 37.35 27.26 40.69 3.56
212 218 3.552132 TGAAGAGGGTTATGCGCATAA 57.448 42.857 33.26 33.26 0.00 1.90
213 219 3.769739 ATGAAGAGGGTTATGCGCATA 57.230 42.857 25.78 25.78 0.00 3.14
218 224 5.307196 TCCCTACTTATGAAGAGGGTTATGC 59.693 44.000 16.65 0.00 42.15 3.14
229 235 7.758820 TCACCCTATTTTCCCTACTTATGAA 57.241 36.000 0.00 0.00 0.00 2.57
255 262 3.118738 ACGGAGGGTGATTACTTGTCATC 60.119 47.826 0.00 0.00 0.00 2.92
275 282 4.611310 TCTATGTTTCGTCTACTCCACG 57.389 45.455 0.00 0.00 38.67 4.94
276 283 5.067413 TGGATCTATGTTTCGTCTACTCCAC 59.933 44.000 0.00 0.00 0.00 4.02
277 284 5.198207 TGGATCTATGTTTCGTCTACTCCA 58.802 41.667 0.00 0.00 0.00 3.86
279 286 6.476053 GGTTTGGATCTATGTTTCGTCTACTC 59.524 42.308 0.00 0.00 0.00 2.59
280 287 6.154706 AGGTTTGGATCTATGTTTCGTCTACT 59.845 38.462 0.00 0.00 0.00 2.57
281 288 6.338937 AGGTTTGGATCTATGTTTCGTCTAC 58.661 40.000 0.00 0.00 0.00 2.59
282 289 6.540438 AGGTTTGGATCTATGTTTCGTCTA 57.460 37.500 0.00 0.00 0.00 2.59
283 290 5.422214 AGGTTTGGATCTATGTTTCGTCT 57.578 39.130 0.00 0.00 0.00 4.18
284 291 6.817140 ACTAAGGTTTGGATCTATGTTTCGTC 59.183 38.462 0.00 0.00 0.00 4.20
285 292 6.594159 CACTAAGGTTTGGATCTATGTTTCGT 59.406 38.462 0.00 0.00 0.00 3.85
286 293 6.456988 GCACTAAGGTTTGGATCTATGTTTCG 60.457 42.308 0.00 0.00 0.00 3.46
290 300 5.189736 TGAGCACTAAGGTTTGGATCTATGT 59.810 40.000 0.00 0.00 0.00 2.29
300 310 3.066760 GCACAAGTTGAGCACTAAGGTTT 59.933 43.478 18.83 0.00 32.94 3.27
307 317 1.945394 CTCAAGCACAAGTTGAGCACT 59.055 47.619 24.28 10.37 43.27 4.40
311 321 4.788840 CTTGAAGCTCAAGCACAAGTTGAG 60.789 45.833 22.11 2.31 46.03 3.02
313 323 3.369385 CTTGAAGCTCAAGCACAAGTTG 58.631 45.455 22.11 0.00 46.03 3.16
314 324 3.705043 CTTGAAGCTCAAGCACAAGTT 57.295 42.857 22.11 4.21 46.03 2.66
349 359 4.340381 GCAGAGTTCCATGGCTTGAATAAT 59.660 41.667 6.96 0.00 0.00 1.28
352 362 2.097825 GCAGAGTTCCATGGCTTGAAT 58.902 47.619 6.96 0.00 0.00 2.57
356 366 1.999648 TTTGCAGAGTTCCATGGCTT 58.000 45.000 6.96 0.00 0.00 4.35
371 381 1.372872 GCCGGTGGACACAATTTGC 60.373 57.895 1.90 0.00 0.00 3.68
411 422 3.959495 ATCAGCATACCCAGGTTCATT 57.041 42.857 0.00 0.00 0.00 2.57
413 424 2.438021 GGTATCAGCATACCCAGGTTCA 59.562 50.000 0.00 0.00 46.61 3.18
414 425 3.127425 GGTATCAGCATACCCAGGTTC 57.873 52.381 0.00 0.00 46.61 3.62
422 433 4.082733 TCGCTACTCATGGTATCAGCATAC 60.083 45.833 0.00 0.00 34.09 2.39
427 441 2.294512 TGCTCGCTACTCATGGTATCAG 59.705 50.000 0.00 0.00 0.00 2.90
472 486 4.877251 GCTGATGATCAAAGCTCTTCTTCT 59.123 41.667 20.84 0.00 32.88 2.85
481 496 5.035443 GTCATTCAAGCTGATGATCAAAGC 58.965 41.667 20.66 20.66 37.20 3.51
493 508 3.262660 TCATGTCTGAGGTCATTCAAGCT 59.737 43.478 0.00 0.00 0.00 3.74
512 527 1.352017 TGACCTCCACATGCTTGTCAT 59.648 47.619 1.56 0.00 32.34 3.06
525 540 3.753797 GGAACTCAATGAAGTTGACCTCC 59.246 47.826 3.51 0.00 41.79 4.30
526 541 4.389374 TGGAACTCAATGAAGTTGACCTC 58.611 43.478 3.51 0.00 41.79 3.85
546 561 6.980397 GGATGAGCCAACATAGTTTTATTTGG 59.020 38.462 0.00 0.00 39.86 3.28
553 568 4.574674 TGAGGATGAGCCAACATAGTTT 57.425 40.909 0.00 0.00 40.02 2.66
555 570 3.244009 CGATGAGGATGAGCCAACATAGT 60.244 47.826 0.00 0.00 40.02 2.12
558 573 1.202734 CCGATGAGGATGAGCCAACAT 60.203 52.381 0.00 0.00 45.00 2.71
576 591 0.801836 GGACAATGCCATTTTCGCCG 60.802 55.000 0.00 0.00 0.00 6.46
577 592 0.801836 CGGACAATGCCATTTTCGCC 60.802 55.000 0.00 0.00 0.00 5.54
583 598 1.304381 AGTGCCGGACAATGCCATT 60.304 52.632 5.05 0.00 0.00 3.16
584 599 2.048023 CAGTGCCGGACAATGCCAT 61.048 57.895 5.05 0.00 37.57 4.40
585 600 2.672651 CAGTGCCGGACAATGCCA 60.673 61.111 5.05 0.00 37.57 4.92
589 604 0.392998 GGATGACAGTGCCGGACAAT 60.393 55.000 5.05 0.00 0.00 2.71
590 605 1.003839 GGATGACAGTGCCGGACAA 60.004 57.895 5.05 0.00 0.00 3.18
593 608 1.271856 TAAAGGATGACAGTGCCGGA 58.728 50.000 5.05 0.00 0.00 5.14
601 616 3.620488 GACAAGGCCATAAAGGATGACA 58.380 45.455 5.01 0.00 41.22 3.58
608 623 3.443681 ACAATTCCGACAAGGCCATAAAG 59.556 43.478 5.01 0.00 40.77 1.85
612 627 1.176527 CACAATTCCGACAAGGCCAT 58.823 50.000 5.01 0.00 40.77 4.40
613 628 1.523154 GCACAATTCCGACAAGGCCA 61.523 55.000 5.01 0.00 40.77 5.36
614 629 1.212751 GCACAATTCCGACAAGGCC 59.787 57.895 0.00 0.00 40.77 5.19
616 631 1.154225 GCGCACAATTCCGACAAGG 60.154 57.895 0.30 0.00 42.97 3.61
618 633 0.602638 AGAGCGCACAATTCCGACAA 60.603 50.000 11.47 0.00 0.00 3.18
620 635 1.355971 TTAGAGCGCACAATTCCGAC 58.644 50.000 11.47 0.00 0.00 4.79
622 637 1.202031 GGTTTAGAGCGCACAATTCCG 60.202 52.381 11.47 0.00 0.00 4.30
623 638 2.084546 AGGTTTAGAGCGCACAATTCC 58.915 47.619 11.47 5.30 0.00 3.01
624 639 3.933332 ACTAGGTTTAGAGCGCACAATTC 59.067 43.478 11.47 0.00 0.00 2.17
628 645 1.067142 CCACTAGGTTTAGAGCGCACA 60.067 52.381 11.47 0.00 0.00 4.57
633 650 0.909623 TGGCCCACTAGGTTTAGAGC 59.090 55.000 0.00 0.00 38.26 4.09
659 676 0.863799 CTCGATCATGATGCCCAACG 59.136 55.000 14.30 9.37 0.00 4.10
671 688 4.610605 TTTAAACTGTGGGACTCGATCA 57.389 40.909 0.00 0.00 0.00 2.92
672 689 6.036844 GGTATTTTAAACTGTGGGACTCGATC 59.963 42.308 0.00 0.00 0.00 3.69
674 691 5.240121 GGTATTTTAAACTGTGGGACTCGA 58.760 41.667 0.00 0.00 0.00 4.04
677 694 4.329392 CCGGTATTTTAAACTGTGGGACT 58.671 43.478 0.00 0.00 0.00 3.85
679 696 3.083293 GCCGGTATTTTAAACTGTGGGA 58.917 45.455 1.90 0.00 0.00 4.37
680 697 2.820787 TGCCGGTATTTTAAACTGTGGG 59.179 45.455 1.90 0.00 0.00 4.61
682 699 5.571357 GTCAATGCCGGTATTTTAAACTGTG 59.429 40.000 15.79 1.84 0.00 3.66
684 701 5.099575 GGTCAATGCCGGTATTTTAAACTG 58.900 41.667 15.79 3.36 0.00 3.16
685 702 5.319140 GGTCAATGCCGGTATTTTAAACT 57.681 39.130 15.79 0.00 0.00 2.66
698 715 3.443045 CAGCCACCGGTCAATGCC 61.443 66.667 2.59 0.00 0.00 4.40
699 716 3.443045 CCAGCCACCGGTCAATGC 61.443 66.667 2.59 5.34 0.00 3.56
700 717 2.040544 GTCCAGCCACCGGTCAATG 61.041 63.158 2.59 2.87 0.00 2.82
701 718 2.063015 TTGTCCAGCCACCGGTCAAT 62.063 55.000 2.59 0.00 28.49 2.57
702 719 2.063015 ATTGTCCAGCCACCGGTCAA 62.063 55.000 2.59 4.29 36.29 3.18
703 720 2.525124 ATTGTCCAGCCACCGGTCA 61.525 57.895 2.59 0.00 0.00 4.02
704 721 2.040544 CATTGTCCAGCCACCGGTC 61.041 63.158 2.59 0.00 0.00 4.79
705 722 1.485294 TACATTGTCCAGCCACCGGT 61.485 55.000 0.00 0.00 0.00 5.28
707 724 1.299541 GATACATTGTCCAGCCACCG 58.700 55.000 0.00 0.00 0.00 4.94
708 725 2.418368 TGATACATTGTCCAGCCACC 57.582 50.000 0.00 0.00 0.00 4.61
709 726 6.639632 ATTATTGATACATTGTCCAGCCAC 57.360 37.500 0.00 0.00 0.00 5.01
710 727 7.517320 ACTATTATTGATACATTGTCCAGCCA 58.483 34.615 0.00 0.00 0.00 4.75
711 728 7.986085 ACTATTATTGATACATTGTCCAGCC 57.014 36.000 0.00 0.00 0.00 4.85
811 1441 7.903995 TTGCATTTAAATTTCAAGATGGACC 57.096 32.000 0.00 0.00 0.00 4.46
813 1443 9.775854 TCTTTTGCATTTAAATTTCAAGATGGA 57.224 25.926 0.00 0.00 0.00 3.41
828 1458 7.046033 GGGATCTGATGAAATCTTTTGCATTT 58.954 34.615 0.00 0.00 45.81 2.32
831 1461 5.018149 TGGGATCTGATGAAATCTTTTGCA 58.982 37.500 0.00 0.00 45.81 4.08
832 1462 5.346522 GTGGGATCTGATGAAATCTTTTGC 58.653 41.667 0.00 0.00 45.81 3.68
833 1463 5.419788 TGGTGGGATCTGATGAAATCTTTTG 59.580 40.000 0.00 0.00 45.81 2.44
834 1464 5.582953 TGGTGGGATCTGATGAAATCTTTT 58.417 37.500 0.00 0.00 45.81 2.27
835 1465 5.197224 TGGTGGGATCTGATGAAATCTTT 57.803 39.130 0.00 0.00 45.81 2.52
836 1466 4.868172 TGGTGGGATCTGATGAAATCTT 57.132 40.909 0.00 0.00 45.81 2.40
841 1471 2.037641 CGCTATGGTGGGATCTGATGAA 59.962 50.000 0.00 0.00 0.00 2.57
849 1479 0.466189 CTTTGCCGCTATGGTGGGAT 60.466 55.000 11.01 0.00 42.78 3.85
858 1488 2.095263 GCAAGTGAAATCTTTGCCGCTA 60.095 45.455 10.23 0.00 0.00 4.26
921 1551 4.223255 TGTGGGTGAAACTGTATATTCGGA 59.777 41.667 0.00 0.00 36.74 4.55
936 1566 1.774217 AGGGGAAGCTTGTGGGTGA 60.774 57.895 2.10 0.00 0.00 4.02
1140 1775 2.409870 GGCGTCCCCATTGCTTGAG 61.410 63.158 0.00 0.00 0.00 3.02
1141 1776 2.361104 GGCGTCCCCATTGCTTGA 60.361 61.111 0.00 0.00 0.00 3.02
1227 1862 2.747855 CGGGTGCTCTTGGCCTTC 60.748 66.667 3.32 0.00 40.92 3.46
1255 1891 1.279749 GGTTTAGGGAGGGGACTGGG 61.280 65.000 0.00 0.00 44.43 4.45
1256 1892 1.279749 GGGTTTAGGGAGGGGACTGG 61.280 65.000 0.00 0.00 44.43 4.00
1257 1893 0.253207 AGGGTTTAGGGAGGGGACTG 60.253 60.000 0.00 0.00 44.43 3.51
1259 1895 2.240667 GTTTAGGGTTTAGGGAGGGGAC 59.759 54.545 0.00 0.00 0.00 4.46
1260 1896 2.565631 GTTTAGGGTTTAGGGAGGGGA 58.434 52.381 0.00 0.00 0.00 4.81
1505 2148 0.696501 ACCAGTAAAATGCCCTCCGT 59.303 50.000 0.00 0.00 0.00 4.69
1506 2149 1.094785 CACCAGTAAAATGCCCTCCG 58.905 55.000 0.00 0.00 0.00 4.63
1511 2155 3.658757 TTGAAGCACCAGTAAAATGCC 57.341 42.857 0.00 0.00 40.33 4.40
1525 2169 1.059994 CAGTCGCGCAGATTGAAGC 59.940 57.895 8.75 0.00 38.69 3.86
1530 2174 1.493950 GCTATGCAGTCGCGCAGATT 61.494 55.000 8.75 0.00 46.99 2.40
1552 2196 1.773052 CAGGATCCCATGACATGAGGT 59.227 52.381 17.24 0.00 0.00 3.85
1553 2197 1.544982 GCAGGATCCCATGACATGAGG 60.545 57.143 17.24 15.23 0.00 3.86
1573 2218 5.332883 GCACAATTATATGACAGAGAGCACG 60.333 44.000 0.00 0.00 0.00 5.34
1639 2284 4.476752 GTAACCCGCCCGATGCCA 62.477 66.667 0.00 0.00 36.24 4.92
1705 2350 9.747898 ATTATGGTATAAACTCAAAACTGACCA 57.252 29.630 0.00 0.00 38.71 4.02
1711 2356 9.498307 CAACGGATTATGGTATAAACTCAAAAC 57.502 33.333 0.00 0.00 0.00 2.43
1712 2357 9.233649 ACAACGGATTATGGTATAAACTCAAAA 57.766 29.630 0.00 0.00 0.00 2.44
1716 2363 6.293244 GGCACAACGGATTATGGTATAAACTC 60.293 42.308 0.00 0.00 0.00 3.01
1718 2365 5.529800 AGGCACAACGGATTATGGTATAAAC 59.470 40.000 0.00 0.00 0.00 2.01
1722 2369 3.135712 TCAGGCACAACGGATTATGGTAT 59.864 43.478 0.00 0.00 0.00 2.73
1729 2376 2.851263 TACTTCAGGCACAACGGATT 57.149 45.000 0.00 0.00 0.00 3.01
1733 2380 2.609459 GGATCATACTTCAGGCACAACG 59.391 50.000 0.00 0.00 0.00 4.10
1734 2381 2.609459 CGGATCATACTTCAGGCACAAC 59.391 50.000 0.00 0.00 0.00 3.32
1738 2385 2.499693 TCAACGGATCATACTTCAGGCA 59.500 45.455 0.00 0.00 0.00 4.75
1739 2386 3.126831 CTCAACGGATCATACTTCAGGC 58.873 50.000 0.00 0.00 0.00 4.85
1740 2387 3.126831 GCTCAACGGATCATACTTCAGG 58.873 50.000 0.00 0.00 0.00 3.86
1741 2388 3.126831 GGCTCAACGGATCATACTTCAG 58.873 50.000 0.00 0.00 0.00 3.02
1742 2389 2.766263 AGGCTCAACGGATCATACTTCA 59.234 45.455 0.00 0.00 0.00 3.02
1743 2390 3.126831 CAGGCTCAACGGATCATACTTC 58.873 50.000 0.00 0.00 0.00 3.01
1744 2391 2.766263 TCAGGCTCAACGGATCATACTT 59.234 45.455 0.00 0.00 0.00 2.24
1745 2392 2.388735 TCAGGCTCAACGGATCATACT 58.611 47.619 0.00 0.00 0.00 2.12
1746 2393 2.890808 TCAGGCTCAACGGATCATAC 57.109 50.000 0.00 0.00 0.00 2.39
1747 2394 3.904800 TTTCAGGCTCAACGGATCATA 57.095 42.857 0.00 0.00 0.00 2.15
1748 2395 2.787473 TTTCAGGCTCAACGGATCAT 57.213 45.000 0.00 0.00 0.00 2.45
1749 2396 2.038426 TCTTTTCAGGCTCAACGGATCA 59.962 45.455 0.00 0.00 0.00 2.92
1750 2397 2.675348 CTCTTTTCAGGCTCAACGGATC 59.325 50.000 0.00 0.00 0.00 3.36
1751 2398 2.039084 ACTCTTTTCAGGCTCAACGGAT 59.961 45.455 0.00 0.00 0.00 4.18
1752 2399 1.416401 ACTCTTTTCAGGCTCAACGGA 59.584 47.619 0.00 0.00 0.00 4.69
1753 2400 1.884235 ACTCTTTTCAGGCTCAACGG 58.116 50.000 0.00 0.00 0.00 4.44
1754 2401 4.093556 GGATAACTCTTTTCAGGCTCAACG 59.906 45.833 0.00 0.00 0.00 4.10
1755 2402 5.249420 AGGATAACTCTTTTCAGGCTCAAC 58.751 41.667 0.00 0.00 0.00 3.18
1756 2403 5.013079 TGAGGATAACTCTTTTCAGGCTCAA 59.987 40.000 0.00 0.00 46.72 3.02
1757 2404 4.532126 TGAGGATAACTCTTTTCAGGCTCA 59.468 41.667 0.00 0.00 46.72 4.26
1758 2405 5.091261 TGAGGATAACTCTTTTCAGGCTC 57.909 43.478 0.00 0.00 46.72 4.70
1781 2428 8.557958 AGTCTAGAACTGGTACCATGTATGGAC 61.558 44.444 16.75 18.80 43.20 4.02
1792 2439 8.283699 ACTCTTCATTAGTCTAGAACTGGTAC 57.716 38.462 0.00 0.00 39.11 3.34
1825 2472 2.508526 ACAACAGAAGCTGAATGGACC 58.491 47.619 0.82 0.00 35.18 4.46
1826 2473 3.817647 AGAACAACAGAAGCTGAATGGAC 59.182 43.478 0.82 0.47 35.18 4.02
1832 2479 2.223947 TGCGTAGAACAACAGAAGCTGA 60.224 45.455 0.82 0.00 35.18 4.26
1847 2494 3.173399 CAAACATCACTGTGTGCGTAG 57.827 47.619 7.79 0.00 33.92 3.51
1986 2635 7.752695 ACTCCAGTTTAAAATGAATCATCGAC 58.247 34.615 16.81 0.00 0.00 4.20
1988 2637 7.485913 CCAACTCCAGTTTAAAATGAATCATCG 59.514 37.037 16.81 0.00 35.83 3.84
2010 2659 3.058224 CGAGATCAACCTGAAAACCCAAC 60.058 47.826 0.00 0.00 0.00 3.77
2055 2704 2.266376 GATTTTCCCGTGCCGCTTCC 62.266 60.000 0.00 0.00 0.00 3.46
2106 2755 1.102978 AAAAGTTCGCAGCCTTGTGT 58.897 45.000 0.00 0.00 36.23 3.72
2178 2827 6.265196 TCTGGAAAGAAGCAGCAAGAAATTTA 59.735 34.615 0.00 0.00 0.00 1.40
2240 2890 3.637229 TCACGTCATATCTTCCTTCCTCC 59.363 47.826 0.00 0.00 0.00 4.30
2258 2908 2.759191 CACCACTGGATCCATATCACG 58.241 52.381 16.63 4.75 33.41 4.35
2415 3081 7.735326 ATTAGTTTACAGAGGGAGTACATGT 57.265 36.000 2.69 2.69 0.00 3.21
2443 3109 9.780186 GCATATAATTTACTCCCTCTGTAAACT 57.220 33.333 0.00 0.00 40.98 2.66
2444 3110 9.555727 TGCATATAATTTACTCCCTCTGTAAAC 57.444 33.333 0.00 0.00 40.98 2.01
2445 3111 9.778741 CTGCATATAATTTACTCCCTCTGTAAA 57.221 33.333 0.00 0.00 41.94 2.01
2446 3112 9.154632 TCTGCATATAATTTACTCCCTCTGTAA 57.845 33.333 0.00 0.00 0.00 2.41
2447 3113 8.721133 TCTGCATATAATTTACTCCCTCTGTA 57.279 34.615 0.00 0.00 0.00 2.74
2448 3114 7.618019 TCTGCATATAATTTACTCCCTCTGT 57.382 36.000 0.00 0.00 0.00 3.41
2449 3115 7.118971 GCTTCTGCATATAATTTACTCCCTCTG 59.881 40.741 0.00 0.00 39.41 3.35
2450 3116 7.164803 GCTTCTGCATATAATTTACTCCCTCT 58.835 38.462 0.00 0.00 39.41 3.69
2451 3117 6.936900 TGCTTCTGCATATAATTTACTCCCTC 59.063 38.462 0.00 0.00 45.31 4.30
2452 3118 6.841601 TGCTTCTGCATATAATTTACTCCCT 58.158 36.000 0.00 0.00 45.31 4.20
2583 3249 9.594038 CACTGTACATGTAATTGTTGAAACTAC 57.406 33.333 7.25 0.00 0.00 2.73
2695 3362 8.251383 ACTATACTAATAGGTGCACAGACATT 57.749 34.615 20.43 13.29 39.63 2.71
2786 3461 0.038343 CCTGGAAACAACATTGCCCG 60.038 55.000 0.00 0.00 42.06 6.13
2790 3465 2.806382 GCCCAACCTGGAAACAACATTG 60.806 50.000 0.00 0.00 40.96 2.82
2791 3466 1.416030 GCCCAACCTGGAAACAACATT 59.584 47.619 0.00 0.00 40.96 2.71
2883 3558 2.038952 AGCTGATGCAGTAACAAGGTGA 59.961 45.455 0.00 0.00 42.74 4.02
2884 3559 2.161012 CAGCTGATGCAGTAACAAGGTG 59.839 50.000 8.42 0.00 42.74 4.00
2885 3560 2.224621 ACAGCTGATGCAGTAACAAGGT 60.225 45.455 23.35 0.00 42.74 3.50
2886 3561 2.430465 ACAGCTGATGCAGTAACAAGG 58.570 47.619 23.35 0.00 42.74 3.61
2887 3562 5.808042 AATACAGCTGATGCAGTAACAAG 57.192 39.130 23.35 0.00 42.81 3.16
2899 3577 7.547722 TGCTTTTCTATCGTAAAATACAGCTGA 59.452 33.333 23.35 4.31 0.00 4.26
2908 3586 6.811253 ACATGGTGCTTTTCTATCGTAAAA 57.189 33.333 0.00 0.00 0.00 1.52
2913 3591 4.685169 ACAACATGGTGCTTTTCTATCG 57.315 40.909 11.63 0.00 0.00 2.92
2922 3600 3.507233 CCAAATGAGTACAACATGGTGCT 59.493 43.478 11.63 0.00 36.38 4.40
2954 3637 8.931385 ACAAATCCTGACAATGCAAATATTAC 57.069 30.769 0.00 0.00 0.00 1.89
2956 3639 7.844009 AGACAAATCCTGACAATGCAAATATT 58.156 30.769 0.00 0.00 0.00 1.28
2959 3642 5.733620 AGACAAATCCTGACAATGCAAAT 57.266 34.783 0.00 0.00 0.00 2.32
2980 3663 6.071334 TGACACTGTTATCCTCCTTGTCTAAG 60.071 42.308 0.00 0.00 34.33 2.18
3063 3746 1.802960 GCGAGATGCATACCTTGATGG 59.197 52.381 0.00 0.00 45.45 3.51
3101 3784 6.899393 ATGGAAGCTGAAGTTTGTCATTTA 57.101 33.333 0.00 0.00 0.00 1.40
3143 3826 4.933505 TTGGTTCTGTCATCAAATTGCA 57.066 36.364 0.00 0.00 0.00 4.08
3273 3956 1.465187 GGTGTTTCAAGCGCGGATTAC 60.465 52.381 8.83 6.38 0.00 1.89
3282 3965 2.561478 TAGTCTGGGGTGTTTCAAGC 57.439 50.000 0.00 0.00 0.00 4.01
3289 3986 0.977395 GTCTGCTTAGTCTGGGGTGT 59.023 55.000 0.00 0.00 0.00 4.16
3290 3987 1.270907 AGTCTGCTTAGTCTGGGGTG 58.729 55.000 0.00 0.00 0.00 4.61
3291 3988 1.625818 CAAGTCTGCTTAGTCTGGGGT 59.374 52.381 0.00 0.00 32.87 4.95
3292 3989 1.625818 ACAAGTCTGCTTAGTCTGGGG 59.374 52.381 0.00 0.00 32.87 4.96
3293 3990 2.693069 CACAAGTCTGCTTAGTCTGGG 58.307 52.381 0.00 0.00 32.87 4.45
3294 3991 2.072298 GCACAAGTCTGCTTAGTCTGG 58.928 52.381 0.00 0.00 34.06 3.86
3295 3992 2.072298 GGCACAAGTCTGCTTAGTCTG 58.928 52.381 0.00 0.00 37.33 3.51
3296 3993 1.694150 TGGCACAAGTCTGCTTAGTCT 59.306 47.619 0.00 0.00 37.33 3.24
3297 3994 2.072298 CTGGCACAAGTCTGCTTAGTC 58.928 52.381 0.00 0.00 38.70 2.59
3299 3996 0.801251 GCTGGCACAAGTCTGCTTAG 59.199 55.000 0.00 0.00 40.65 2.18
3300 3997 0.108396 TGCTGGCACAAGTCTGCTTA 59.892 50.000 0.00 0.00 43.73 3.09
3301 3998 0.538977 ATGCTGGCACAAGTCTGCTT 60.539 50.000 0.00 0.00 43.73 3.91
3302 3999 0.325933 TATGCTGGCACAAGTCTGCT 59.674 50.000 0.00 0.00 43.73 4.24
3303 4000 1.386533 ATATGCTGGCACAAGTCTGC 58.613 50.000 0.00 0.00 43.65 4.26
3304 4001 3.192001 ACAAATATGCTGGCACAAGTCTG 59.808 43.478 0.00 0.00 38.70 3.51
3305 4002 3.424703 ACAAATATGCTGGCACAAGTCT 58.575 40.909 0.00 0.00 38.70 3.24
3306 4003 3.441572 AGACAAATATGCTGGCACAAGTC 59.558 43.478 0.00 2.97 38.70 3.01
3307 4004 3.192001 CAGACAAATATGCTGGCACAAGT 59.808 43.478 0.00 0.00 38.70 3.16
3308 4005 3.441222 TCAGACAAATATGCTGGCACAAG 59.559 43.478 0.00 0.00 38.70 3.16
3353 4050 7.922278 TGAAATTTTCTGTGATTGGAACTCAAG 59.078 33.333 10.33 0.00 38.95 3.02
3355 4052 7.285172 TCTGAAATTTTCTGTGATTGGAACTCA 59.715 33.333 10.33 0.00 0.00 3.41
3356 4053 7.592903 GTCTGAAATTTTCTGTGATTGGAACTC 59.407 37.037 10.33 0.00 0.00 3.01
3360 4057 6.957920 TGTCTGAAATTTTCTGTGATTGGA 57.042 33.333 10.33 0.00 0.00 3.53
3361 4058 6.090358 GCATGTCTGAAATTTTCTGTGATTGG 59.910 38.462 10.33 2.36 0.00 3.16
3365 4062 6.395426 AAGCATGTCTGAAATTTTCTGTGA 57.605 33.333 10.33 3.98 0.00 3.58
3366 4063 7.342194 CAAAAGCATGTCTGAAATTTTCTGTG 58.658 34.615 10.33 5.92 0.00 3.66
3367 4064 6.018507 GCAAAAGCATGTCTGAAATTTTCTGT 60.019 34.615 10.33 0.00 0.00 3.41
3368 4065 6.202188 AGCAAAAGCATGTCTGAAATTTTCTG 59.798 34.615 10.33 9.70 0.00 3.02
3369 4066 6.285990 AGCAAAAGCATGTCTGAAATTTTCT 58.714 32.000 10.33 0.00 0.00 2.52
3370 4067 6.535274 AGCAAAAGCATGTCTGAAATTTTC 57.465 33.333 2.05 2.05 0.00 2.29
3371 4068 6.238538 CCAAGCAAAAGCATGTCTGAAATTTT 60.239 34.615 0.00 0.00 0.00 1.82
3372 4069 5.237779 CCAAGCAAAAGCATGTCTGAAATTT 59.762 36.000 0.00 0.00 0.00 1.82
3373 4070 4.753107 CCAAGCAAAAGCATGTCTGAAATT 59.247 37.500 0.00 0.00 0.00 1.82
3374 4071 4.202284 ACCAAGCAAAAGCATGTCTGAAAT 60.202 37.500 0.00 0.00 0.00 2.17
3375 4072 3.132646 ACCAAGCAAAAGCATGTCTGAAA 59.867 39.130 0.00 0.00 0.00 2.69
3376 4073 2.694628 ACCAAGCAAAAGCATGTCTGAA 59.305 40.909 0.00 0.00 0.00 3.02
3377 4074 2.034939 CACCAAGCAAAAGCATGTCTGA 59.965 45.455 0.00 0.00 0.00 3.27
3378 4075 2.223876 ACACCAAGCAAAAGCATGTCTG 60.224 45.455 0.00 0.00 0.00 3.51
3379 4076 2.034124 ACACCAAGCAAAAGCATGTCT 58.966 42.857 0.00 0.00 0.00 3.41
3380 4077 2.129607 CACACCAAGCAAAAGCATGTC 58.870 47.619 0.00 0.00 0.00 3.06
3381 4078 1.807377 GCACACCAAGCAAAAGCATGT 60.807 47.619 0.00 0.00 0.00 3.21
3382 4079 0.863144 GCACACCAAGCAAAAGCATG 59.137 50.000 0.00 0.00 0.00 4.06
3383 4080 0.464870 TGCACACCAAGCAAAAGCAT 59.535 45.000 0.00 0.00 39.39 3.79
3384 4081 0.464870 ATGCACACCAAGCAAAAGCA 59.535 45.000 0.00 0.00 46.27 3.91
3385 4082 1.585297 AATGCACACCAAGCAAAAGC 58.415 45.000 0.00 0.00 46.27 3.51
3386 4083 3.374678 ACAAAATGCACACCAAGCAAAAG 59.625 39.130 0.00 0.00 46.27 2.27
3390 4087 9.835390 GTTCAAAAACAAAATGCACACCAAGCA 62.835 37.037 0.00 0.00 39.67 3.91
3394 4091 4.756642 TGTTCAAAAACAAAATGCACACCA 59.243 33.333 0.00 0.00 42.34 4.17
3398 4095 4.341935 GCCTGTTCAAAAACAAAATGCAC 58.658 39.130 0.00 0.00 44.53 4.57
3400 4097 3.627123 AGGCCTGTTCAAAAACAAAATGC 59.373 39.130 3.11 0.00 44.53 3.56
3412 4109 4.221703 TCAGAAAAACAAAAGGCCTGTTCA 59.778 37.500 5.69 0.00 35.98 3.18
3413 4110 4.754322 TCAGAAAAACAAAAGGCCTGTTC 58.246 39.130 5.69 0.00 35.98 3.18
3415 4112 4.023291 TCTCAGAAAAACAAAAGGCCTGT 58.977 39.130 5.69 0.00 0.00 4.00
3416 4113 4.654091 TCTCAGAAAAACAAAAGGCCTG 57.346 40.909 5.69 0.00 0.00 4.85
3417 4114 4.022849 CGATCTCAGAAAAACAAAAGGCCT 60.023 41.667 0.00 0.00 0.00 5.19
3419 4116 5.108385 TCGATCTCAGAAAAACAAAAGGC 57.892 39.130 0.00 0.00 0.00 4.35
3420 4117 6.803807 GGATTCGATCTCAGAAAAACAAAAGG 59.196 38.462 0.00 0.00 0.00 3.11
3421 4118 7.362662 TGGATTCGATCTCAGAAAAACAAAAG 58.637 34.615 0.00 0.00 0.00 2.27
3424 4121 7.452880 AATGGATTCGATCTCAGAAAAACAA 57.547 32.000 0.00 0.00 0.00 2.83
3425 4122 7.452880 AAATGGATTCGATCTCAGAAAAACA 57.547 32.000 0.00 0.00 0.00 2.83
3433 4130 6.994496 AGCTGAAATAAATGGATTCGATCTCA 59.006 34.615 0.00 0.00 0.00 3.27
3440 4137 7.253883 CGAGCAAAAGCTGAAATAAATGGATTC 60.254 37.037 0.00 0.00 0.00 2.52
3447 4144 7.027161 GGTAATCGAGCAAAAGCTGAAATAAA 58.973 34.615 0.00 0.00 0.00 1.40
3448 4145 6.374333 AGGTAATCGAGCAAAAGCTGAAATAA 59.626 34.615 0.00 0.00 0.00 1.40
3449 4146 5.880332 AGGTAATCGAGCAAAAGCTGAAATA 59.120 36.000 0.00 0.00 0.00 1.40
3450 4147 4.702131 AGGTAATCGAGCAAAAGCTGAAAT 59.298 37.500 0.00 0.00 0.00 2.17
3451 4148 4.072131 AGGTAATCGAGCAAAAGCTGAAA 58.928 39.130 0.00 0.00 0.00 2.69
3452 4149 3.674997 AGGTAATCGAGCAAAAGCTGAA 58.325 40.909 0.00 0.00 0.00 3.02
3453 4150 3.334583 AGGTAATCGAGCAAAAGCTGA 57.665 42.857 0.00 0.00 0.00 4.26
3454 4151 4.184629 ACTAGGTAATCGAGCAAAAGCTG 58.815 43.478 0.00 0.00 0.00 4.24
3455 4152 4.473477 ACTAGGTAATCGAGCAAAAGCT 57.527 40.909 0.00 0.00 0.00 3.74
3456 4153 5.811100 AGTAACTAGGTAATCGAGCAAAAGC 59.189 40.000 0.00 0.00 0.00 3.51
3457 4154 6.812160 ACAGTAACTAGGTAATCGAGCAAAAG 59.188 38.462 0.00 0.00 0.00 2.27
3458 4155 6.694447 ACAGTAACTAGGTAATCGAGCAAAA 58.306 36.000 0.00 0.00 0.00 2.44
3459 4156 6.276832 ACAGTAACTAGGTAATCGAGCAAA 57.723 37.500 0.00 0.00 0.00 3.68
3460 4157 5.448225 CGACAGTAACTAGGTAATCGAGCAA 60.448 44.000 10.42 0.00 0.00 3.91
3461 4158 4.034858 CGACAGTAACTAGGTAATCGAGCA 59.965 45.833 10.42 0.00 0.00 4.26
3462 4159 4.272018 TCGACAGTAACTAGGTAATCGAGC 59.728 45.833 13.33 0.00 32.82 5.03
3463 4160 5.980698 TCGACAGTAACTAGGTAATCGAG 57.019 43.478 13.33 0.00 32.82 4.04
3464 4161 6.372659 AGTTTCGACAGTAACTAGGTAATCGA 59.627 38.462 13.33 13.33 36.43 3.59
3465 4162 6.549952 AGTTTCGACAGTAACTAGGTAATCG 58.450 40.000 9.89 9.89 36.43 3.34
3466 4163 9.846248 TTAAGTTTCGACAGTAACTAGGTAATC 57.154 33.333 0.84 0.00 37.06 1.75
3470 4167 9.551734 AAAATTAAGTTTCGACAGTAACTAGGT 57.448 29.630 0.84 0.00 37.06 3.08
3471 4168 9.807386 CAAAATTAAGTTTCGACAGTAACTAGG 57.193 33.333 0.00 0.00 37.06 3.02
3495 4192 4.344968 TCGAAAGATCCTAGATGCCATCAA 59.655 41.667 7.56 0.00 33.31 2.57
3496 4193 3.897505 TCGAAAGATCCTAGATGCCATCA 59.102 43.478 7.56 0.00 33.31 3.07
3497 4194 4.527509 TCGAAAGATCCTAGATGCCATC 57.472 45.455 0.00 0.00 33.31 3.51
3516 4213 0.811616 CGCCCTCCCTTTCAGAATCG 60.812 60.000 0.00 0.00 0.00 3.34
3527 4224 3.316573 CTGGTTCAGACGCCCTCCC 62.317 68.421 0.00 0.00 32.44 4.30
3534 4231 1.374758 GGGCTCACTGGTTCAGACG 60.375 63.158 1.59 0.00 35.18 4.18
3535 4232 1.003233 GGGGCTCACTGGTTCAGAC 60.003 63.158 1.59 0.00 35.18 3.51
3545 4242 1.001641 AGAAGCACATGGGGCTCAC 60.002 57.895 13.62 11.05 41.66 3.51
3550 4247 1.389609 GGCATCAGAAGCACATGGGG 61.390 60.000 0.00 0.00 0.00 4.96
3552 4249 1.389609 GGGGCATCAGAAGCACATGG 61.390 60.000 1.61 0.00 37.05 3.66
3572 4269 8.214721 TCATAGTACAGATCTACAGACAGTTG 57.785 38.462 0.00 0.00 0.00 3.16
3578 4275 6.770542 ACGGATCATAGTACAGATCTACAGA 58.229 40.000 17.12 0.00 40.32 3.41
3598 4307 7.657354 CCATCTCATTCACAATAATTCTACGGA 59.343 37.037 0.00 0.00 0.00 4.69
3601 4310 7.571983 CGGCCATCTCATTCACAATAATTCTAC 60.572 40.741 2.24 0.00 0.00 2.59
3602 4311 6.427853 CGGCCATCTCATTCACAATAATTCTA 59.572 38.462 2.24 0.00 0.00 2.10
3609 4318 2.569059 CTCGGCCATCTCATTCACAAT 58.431 47.619 2.24 0.00 0.00 2.71
3613 4322 0.462581 GTGCTCGGCCATCTCATTCA 60.463 55.000 2.24 0.00 0.00 2.57
3630 4339 3.936782 TTGCAGAGATGCACCCAGGTG 62.937 57.143 12.66 12.66 45.32 4.00
3631 4340 1.782201 TTGCAGAGATGCACCCAGGT 61.782 55.000 1.74 0.00 45.32 4.00
3649 4366 7.560991 TGAAATACATCAATCCAGCAATACCTT 59.439 33.333 0.00 0.00 0.00 3.50
3660 4377 6.718454 AGATCCCACATGAAATACATCAATCC 59.282 38.462 0.00 0.00 37.07 3.01
3661 4378 7.591165 CAGATCCCACATGAAATACATCAATC 58.409 38.462 0.00 0.00 37.07 2.67
3662 4379 6.015688 GCAGATCCCACATGAAATACATCAAT 60.016 38.462 0.00 0.00 37.07 2.57
3663 4380 5.300034 GCAGATCCCACATGAAATACATCAA 59.700 40.000 0.00 0.00 37.07 2.57
3664 4381 4.823442 GCAGATCCCACATGAAATACATCA 59.177 41.667 0.00 0.00 37.07 3.07
3665 4382 4.823442 TGCAGATCCCACATGAAATACATC 59.177 41.667 0.00 0.00 37.07 3.06
3666 4383 4.795469 TGCAGATCCCACATGAAATACAT 58.205 39.130 0.00 0.00 40.17 2.29
3667 4384 4.201657 CTGCAGATCCCACATGAAATACA 58.798 43.478 8.42 0.00 0.00 2.29
3668 4385 3.004106 GCTGCAGATCCCACATGAAATAC 59.996 47.826 20.43 0.00 0.00 1.89
3669 4386 3.117776 AGCTGCAGATCCCACATGAAATA 60.118 43.478 20.43 0.00 0.00 1.40
3670 4387 2.029623 GCTGCAGATCCCACATGAAAT 58.970 47.619 20.43 0.00 0.00 2.17
3671 4388 1.005097 AGCTGCAGATCCCACATGAAA 59.995 47.619 20.43 0.00 0.00 2.69
3672 4389 0.622136 AGCTGCAGATCCCACATGAA 59.378 50.000 20.43 0.00 0.00 2.57
3673 4390 0.107361 CAGCTGCAGATCCCACATGA 60.107 55.000 20.43 0.00 0.00 3.07
3688 4405 1.310933 CGGAAGCCATTCTTGCAGCT 61.311 55.000 0.00 0.00 42.51 4.24
3689 4406 1.138247 CGGAAGCCATTCTTGCAGC 59.862 57.895 0.00 0.00 42.51 5.25
3695 4412 2.267045 GCAAACCGGAAGCCATTCT 58.733 52.632 9.46 0.00 35.63 2.40
3706 4423 2.728846 CGATGAGAAACATGGCAAACCG 60.729 50.000 0.00 0.00 39.56 4.44
3718 4435 9.480538 GTAAAAATAATGTTACGCGATGAGAAA 57.519 29.630 15.93 0.00 0.00 2.52
3726 4443 5.141355 TCCGGTAAAAATAATGTTACGCG 57.859 39.130 3.53 3.53 32.11 6.01
3741 4458 5.832060 TGGAACAAGGTAATTTTTCCGGTAA 59.168 36.000 0.00 0.00 38.92 2.85
3742 4459 5.383476 TGGAACAAGGTAATTTTTCCGGTA 58.617 37.500 0.00 0.00 38.92 4.02
3804 4521 6.170506 AGAAGAGTGTGTACAAACTTGAACA 58.829 36.000 19.75 0.00 0.00 3.18
3831 4548 3.681594 CGCATAGTCTTTGCCCCTTTAGA 60.682 47.826 9.37 0.00 36.75 2.10
3832 4549 2.614057 CGCATAGTCTTTGCCCCTTTAG 59.386 50.000 9.37 0.00 36.75 1.85
3833 4550 2.237643 TCGCATAGTCTTTGCCCCTTTA 59.762 45.455 9.37 0.00 36.75 1.85
3834 4551 1.004277 TCGCATAGTCTTTGCCCCTTT 59.996 47.619 9.37 0.00 36.75 3.11
3835 4552 0.618458 TCGCATAGTCTTTGCCCCTT 59.382 50.000 9.37 0.00 36.75 3.95
3839 4556 4.319177 AGGATATTCGCATAGTCTTTGCC 58.681 43.478 9.37 0.00 36.75 4.52
3851 4568 5.606348 AGGGATATCAGAAGGATATTCGC 57.394 43.478 4.83 0.00 46.76 4.70
3864 4588 4.521639 GCAATTCAGCATCAAGGGATATCA 59.478 41.667 4.83 0.00 30.87 2.15
3875 4599 4.288531 GCTTGTATCAGCAATTCAGCATC 58.711 43.478 0.00 0.00 39.83 3.91
3883 4607 3.689347 TGAGTTGGCTTGTATCAGCAAT 58.311 40.909 0.00 0.00 42.10 3.56
3884 4608 3.138884 TGAGTTGGCTTGTATCAGCAA 57.861 42.857 0.00 0.00 42.10 3.91
3885 4609 2.857186 TGAGTTGGCTTGTATCAGCA 57.143 45.000 0.00 0.00 42.10 4.41
3886 4610 3.064545 GTCATGAGTTGGCTTGTATCAGC 59.935 47.826 0.00 0.00 39.28 4.26
3888 4612 4.256110 CAGTCATGAGTTGGCTTGTATCA 58.744 43.478 0.00 0.00 38.57 2.15
3889 4613 3.624861 CCAGTCATGAGTTGGCTTGTATC 59.375 47.826 12.03 0.00 38.57 2.24
3890 4614 3.614092 CCAGTCATGAGTTGGCTTGTAT 58.386 45.455 12.03 0.00 38.57 2.29
3893 4772 1.171308 CCCAGTCATGAGTTGGCTTG 58.829 55.000 17.17 4.33 38.57 4.01
3897 4776 0.035056 GGGTCCCAGTCATGAGTTGG 60.035 60.000 13.44 13.44 0.00 3.77
3909 4788 1.004745 GATGCTTCTTTCTGGGTCCCA 59.995 52.381 11.11 11.11 0.00 4.37
3910 4789 1.283321 AGATGCTTCTTTCTGGGTCCC 59.717 52.381 0.00 0.00 0.00 4.46
3922 4801 1.596727 GAGAATGGTGCGAGATGCTTC 59.403 52.381 0.00 0.00 46.63 3.86
3923 4802 1.209019 AGAGAATGGTGCGAGATGCTT 59.791 47.619 0.00 0.00 46.63 3.91
3944 4823 2.287368 GGGTTTTAGTTGTCGGCTGTTG 60.287 50.000 0.00 0.00 0.00 3.33
3975 4854 7.412853 GTTCAATTGCGATATCTTCTGTCATT 58.587 34.615 0.00 0.00 0.00 2.57
3991 4870 6.212888 AGTCATATTCCTTGGTTCAATTGC 57.787 37.500 0.00 0.00 0.00 3.56
4024 4903 0.659427 TCGTGGTATTCGACGCTAGG 59.341 55.000 2.04 0.00 43.48 3.02
4025 4904 2.463553 TTCGTGGTATTCGACGCTAG 57.536 50.000 2.04 0.00 43.48 3.42
4026 4905 2.518949 GTTTCGTGGTATTCGACGCTA 58.481 47.619 2.04 0.00 43.48 4.26
4028 4907 0.022853 CGTTTCGTGGTATTCGACGC 59.977 55.000 2.04 0.00 43.48 5.19
4029 4908 1.605500 TCGTTTCGTGGTATTCGACG 58.394 50.000 0.45 0.45 44.74 5.12
4030 4909 5.475407 GTTATTCGTTTCGTGGTATTCGAC 58.525 41.667 0.00 0.00 37.05 4.20
4035 4914 7.983484 AGAAATAGGTTATTCGTTTCGTGGTAT 59.017 33.333 0.00 0.00 34.79 2.73
4052 4931 7.004086 TCAACTTTTCATCCACAGAAATAGGT 58.996 34.615 0.00 0.00 35.17 3.08
4103 4983 1.580845 GGTGTGTGCTGATGTCTGGC 61.581 60.000 0.00 0.00 0.00 4.85
4104 4984 0.250424 TGGTGTGTGCTGATGTCTGG 60.250 55.000 0.00 0.00 0.00 3.86
4180 5060 2.197465 AGGGCTTAGGTTAGGGACAAG 58.803 52.381 0.00 0.00 0.00 3.16
4199 5079 7.831753 TGAGGAATTTTCAGTAGAGTCTGTAG 58.168 38.462 1.86 0.00 36.85 2.74
4213 5095 6.647895 ACATGTTCTTTGCATGAGGAATTTTC 59.352 34.615 11.58 0.00 44.60 2.29
4245 5127 3.134401 CGAAGCTCAGCTGACATGT 57.866 52.632 13.74 0.00 39.62 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.